Pregenerated sensors for TMEM95 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094845Ensembl transcript IDs: ENSMUST00000178597.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCTGCACAATATTAATACAATGGAGGGACTGTATGCCAGCGGGTTaGCTGATGTGGTCTCACCCCAGAGGGAGAGAGTTTTCCAGAACC | + |
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Preference number: 1 (lower is better) Translates to: GCTILIQWRDCMPAG*LMWSHPRGREFSRT Trigger: GGTTCTGGAAAACTCTCTCCCTCTGGGGTGAGACCACATCAGTCAACCCGCTGGCATACAGTCCCTCCATTGTATTAATATTGTGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CCA 90 bp | ATTGGTGGAACACAGAAAGGGAGGGACTTTCCAGCTGTGGGTGCTTaGGTTCCTGGAGGCCATCTGACACGAATATTGATAGCAGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: IGGTQKGRDFPAVGA*VPGGHLTRILIAEV Trigger: GACTTCTGCTATCAATATTCGTGTCAGATGGCCTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCTTTCTGTGTTCCACCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR GCA 90 bp | TTTGATTGGTGGAACACAGAAAGGGAGGGACTTTCCAGCTGTGGGTaGTTGGGTTCCTGGAGGCCATCTGACACGAATATTGATAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: FDWWNTEREGLSSCG*LGSWRPSDTNIDSR Trigger: TCTGCTATCAATATTCGTGTCAGATGGCCTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCTTTCTGTGTTCCACCAATCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CCA 90 bp | AACACAGAAAGGGAGGGACTTTCCAGCTGTGGGTGCTTGGGTTCCTaGAGGCCATCTGACACGAATATTGATAGCAGAAGTCTGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: NTEREGLSSCGCLGS*RPSDTNIDSRSLRF Trigger: AAACCTCAGACTTCTGCTATCAATATTCGTGTCAGATGGCCTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCTTTCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR TCA 90 bp | CCATCTGACACGAATATTGATAGCAGAAGTCTGAGGTTTAGGGTCTaGAAGACTGAGGCTTTGGGGCTGGGTCTAAAAAGTGTTCCCACC | + |
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Preference number: 1 (lower is better) Translates to: PSDTNIDSRSLRFRV*KTEALGLGLKSVPT Trigger: GGTGGGAACACTTTTTAGACCCAGCCCCAAAGCCTCAGTCTTTCAGACCCTAAACCTCAGACTTCTGCTATCAATATTCGTGTCAGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCAACAGTCCCCCGCTTTCCGGGAATGGACAGAGGGGATGTGGGAGTGGTGGGACTTTCCAGCTGTaGGTGCTTGGGTTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QANSPPLSGNGQRGCGSGGTFQL*VLGFLE Trigger: CTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCC...ACCACTCCCACATCCCCTCTGTCCATTCCCGGAAAGCGGGGGACTGTTGGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTTTTCCAGAACCCTCATTCCCGGATTCCGGATCAGTCATTGGAGGGCCTCCCGCTTTCCGGGAATaGACAGAGGGGATGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ESFPEPSFPDSGSVIGGPPAFRE*TEGMWE Trigger: CTCCCACATCCCCTCTGTCCATTCCCGGAAAGCGGG...AGGCCCTCCAATGACTGATCCGGAATCCGGGAATGAGGGTTCTGGAAAACTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CAA 90 bp | GAGAGAGTTTTCCAGAACCCTCATTCCCGGATTCCGGATCAGTCATaGGAGGGCCTAGAGCAACATCTACAGGCCAACAGTCCCCCGCTT | + |
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Preference number: 2 (lower is better) Translates to: ERVFQNPHSRIPDQS*EGLEQHLQANSPPL Trigger: AAGCGGGGGACTGTTGGCCTGTAGATGTTGCTCTAGGCCCTCCAATGACTGATCCGGAATCCGGGAATGAGGGTTCTGGAAAACTCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAATGGAAAGCATCACACAGCAGATTTACACAGGCCCAGAAGGAGGGGGACTTTCCAGCTGTGGGTaGTTGGGTTCCTGGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TGMESITQQIYTGPEGGGLSSCG*LGSWRP Trigger: TGGCCTCCAGGAACCCAAGCACCCACAGCTGGAAAG...TCCCCCTCCTTCTGGGCCTGTGTAAATCTGCTGTGTGATGCTTTCCATTCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CAA 90 bp | GATTGGTGGAACACAGAAAGGGAGGGACTTTCCAGCTGTGGGTGCTaGGGTTCCTGGAGGCCATCTGACACGAATATTGATAGCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: DWWNTEREGLSSCGC*GSWRPSDTNIDSRS Trigger: ACTTCTGCTATCAATATTCGTGTCAGATGGCCTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCTTTCTGTGTTCCACCAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR-3UTR CCA 90 bp | GGAATGGACAGAGGGGATGTGGGAGTGGTGGTGGTAAGCGATTCTTTCCTTCTGGCTCTGTTTGATTGGTaGAACACAGAAAGGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GMDRGDVGVVVVSDSFLLALFDW*NTEREG Trigger: TCCCTCCCTTTCTGTGTTCCACCAATCAAACAGAGC...CAGAAGGAAAGAATCGCTTACCACCACCACTCCCACATCCCCTCTGTCCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CAA 90 bp | AGGCTGCACAATATTAATACAATGGAGGGACTGTATGCCAGCGGGTaGACTGATGTGGTCTCACCCCAGAGGGAGAGAGTTTTCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RLHNINTMEGLYASG*TDVVSPQRERVFQN Trigger: GTTCTGGAAAACTCTCTCCCTCTGGGGTGAGACCACATCAGTCAACCCGCTGGCATACAGTCCCTCCATTGTATTAATATTGTGCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR-3UTR TCA 90 bp | AATGGAAAGCATCACACAGCAGATTTACACAGGCCCAGAAGGAGGGGGAGGTCCATCTGCTGCTCTGTTTaGTTGGTGGAACACAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: NGKHHTADLHRPRRRGRSICCSV*LVEHRK Trigger: CTTTCTGTGTTCCACCAATCAAACAGAGCAGCAGAT...GGACCTCCCCCTCCTTCTGGGCCTGTGTAAATCTGCTGTGTGATGCTTTCCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGATGGAGTCAGACAGGAATGGAAAGCATCACACAGCAGATTTACACAGGGGGTGCTTGGGTTCCTaGAGGCCATCTGACACGAAT | + |
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Preference number: 2 (lower is better) Translates to: LQMESDRNGKHHTADLHRGCLGS*RPSDTN Trigger: ATTCGTGTCAGATGGCCTCCAGGAACCCAAGCACCC...CCTGTGTAAATCTGCTGTGTGATGCTTTCCATTCCTGTCTGACTCCATCTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR GCA 72 bp | TGGAACACAGAAAGGGAGGGACTTTCCAGCTGTGGGTaGTTGGGTTCCTGGAGGCCATCTGACACGAATATT | + |
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Preference number: 3 (lower is better) Translates to: WNTEREGLSSCG*LGSWRPSDTNI Trigger: AATATTCGTGTCAGATGGCCTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCTTTCTGTGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CCA 72 bp | AGGGAGGGACTTTCCAGCTGTGGGTGCTTGGGTTCCTaGAGGCCATCTGACACGAATATTGATAGCAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: REGLSSCGCLGS*RPSDTNIDSRS Trigger: ACTTCTGCTATCAATATTCGTGTCAGATGGCCTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CCA 72 bp | CTGCCTGCCCAAGTTGCAGATGGAGTCAGACAGGAATaGAAAGCATCACACAGCAGATTTACACAGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LPAQVADGVRQE*KASHSRFTQAQ Trigger: CTGGGCCTGTGTAAATCTGCTGTGTGATGCTTTCCATTCCTGTCTGACTCCATCTGCAACTTGGGCAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CCA 72 bp | ACACAGAAAGGGAGGGACTTTCCAGCTGTGGGTGCTTaGGTTCCTGGAGGCCATCTGACACGAATATTGATA | + |
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Preference number: 3 (lower is better) Translates to: TQKGRDFPAVGA*VPGGHLTRILI Trigger: TATCAATATTCGTGTCAGATGGCCTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCTTTCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR-3UTR CAA 90 bp | GTTTTCCAGAACCCTCATTCCCGGATTCCGGATCAGTCATTGGAGGGCCTAGAGCATCTGCTGCTCTGTTaGATTGGTGGAACACAGAAA | + |
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Preference number: 3 (lower is better) Translates to: VFQNPHSRIPDQSLEGLEHLLLC*IGGTQK Trigger: TTTCTGTGTTCCACCAATCAAACAGAGCAGCAGATG...CTCTAGGCCCTCCAATGACTGATCCGGAATCCGGGAATGAGGGTTCTGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR TCA 72 bp | GGAGGCCATCTGACACGAATATTGATAGCAGAAGTCTaGGGTTTAGGGTCTGAAAGACTGAGGCTTTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: GGHLTRILIAEV*GLGSERLRLWG Trigger: GCCCCAAAGCCTCAGTCTTTCAGACCCTAAACCTCAGACTTCTGCTATCAATATTCGTGTCAGATGGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR GCA 72 bp | ATTTACACAGGCCCAGAAGGAGGGGGAGGTCCAGGCTaGACAATATTAATACAATGGAGGGACTGTATGCCA | + |
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Preference number: 3 (lower is better) Translates to: IYTGPEGGGGPG*TILIQWRDCMP Trigger: TGGCATACAGTCCCTCCATTGTATTAATATTGTGCAGCCTGGACCTCCCCCTCCTTCTGGGCCTGTGTAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR GCA 72 bp | TTCCTAAGAATTCCCATCCCATCTGCCTGCCCAAGTTaGAGATGGAGTCAGACAGGAATGGAAAGCATCACA | + |
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Preference number: 3 (lower is better) Translates to: FLRIPIPSACPS*RWSQTGMESIT Trigger: TGTGATGCTTTCCATTCCTGTCTGACTCCATCTGCAACTTGGGCAGGCAGATGGGATGGGAATTCTTAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR TCA 72 bp | ACGAATATTGATAGCAGAAGTCTGAGGTTTAGGGTCTaGAAGACTGAGGCTTTGGGGCTGGGTCTAAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: TNIDSRSLRFRV*KTEALGLGLKS Trigger: ACTTTTTAGACCCAGCCCCAAAGCCTCAGTCTTTCAGACCCTAAACCTCAGACTTCTGCTATCAATATTCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR CCA 90 bp | CAGGCCAACAGTCCCCCGCTTTCCGGGAATGGACAGAGGGGATGTGGGAGTGGTTGTACTGGGGGATCCTaGTCTTCTGAAGCCATTGCC | + |
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Preference number: 4 (lower is better) Translates to: QANSPPLSGNGQRGCGSGCTGGS*SSEAIA Trigger: GGCAATGGCTTCAGAAGACCAGGATCCCCCAGTACA...ACCACTCCCACATCCCCTCTGTCCATTCCCGGAAAGCGGGGGACTGTTGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR CCA 90 bp | TGGAACACAGAAAGGGAGGGACTTTCCAGCTGTGGGTGCTTGGGTTCCTGGAGGCACAAAGAGCTTCCCTaGTGTACTGGGGGATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: WNTEREGLSSCGCLGSWRHKELP*CTGGSW Trigger: CCAGGATCCCCCAGTACACCAGGGAAGCTCTTTGTG...CCTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCTTTCTGTGTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR GCA 90 bp | CAGGCCAACAGTCCCCCGCTTTCCGGGAATGGACAGAGGGGATGTGGGAGTGGTCACAAGTCTTTTGCTTaGAGGTTCAGGTACTCCACT | + |
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Preference number: 4 (lower is better) Translates to: QANSPPLSGNGQRGCGSGHKSFA*RFRYST Trigger: AGTGGAGTACCTGAACCTGCAAGCAAAAGACTTGTG...ACCACTCCCACATCCCCTCTGTCCATTCCCGGAAAGCGGGGGACTGTTGGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR CCA 90 bp | CAGGAATGGAAAGCATCACACAGCAGATTTACACAGGCCCAGAAGGAGGGGGAGCCTTGCCCTCGCAGGTaGAGCAGTTGTACAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: QEWKASHSRFTQAQKEGEPCPRR*SSCTGW Trigger: CCATCCTGTACAACTGCTCCACCTGCGAGGGCAAGG...CTCCCCCTCCTTCTGGGCCTGTGTAAATCTGCTGTGTGATGCTTTCCATTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR GCA 90 bp | TTCCTGGCATCATCTGCTGCTCTGTTTGATTGGTGGAACACAGAAAGGGAGGGAAGTTGTACAGGATGGTaGTGCCCCGGCAGACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLASSAALFDWWNTEREGSCTGW*CPGRQE Trigger: CTCCTGTCTGCCGGGGCAGCACCATCCTGTACAACT...TCCCTCCCTTTCTGTGTTCCACCAATCAAACAGAGCAGCAGATGATGCCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR CCA 90 bp | AGCGGGTTGACTGATGTGGTCTCACCCCAGAGGGAGAGAGTTTTCCAGAACCCTAAAGGCCGAGAAATCTaGGGAAGCCCATTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGLTDVVSPQRERVFQNPKGREI*GSPFLP Trigger: TGGAAGGAATGGGCTTCCCCAGATTTCTCGGCCTTT...AGGGTTCTGGAAAACTCTCTCCCTCTGGGGTGAGACCACATCAGTCAACCCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CAA 72 bp | TTCCAGAACCCTCATTCCCGGATTCCGGATCAGTCATaGGAGGGCCTAGAGCAACATCTACAGGCCAACAGT | + |
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Preference number: 4 (lower is better) Translates to: FQNPHSRIPDQS*EGLEQHLQANS Trigger: ACTGTTGGCCTGTAGATGTTGCTCTAGGCCCTCCAATGACTGATCCGGAATCCGGGAATGAGGGTTCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR TCA 90 bp | ATTGGTGGAACACAGAAAGGGAGGGACTTTCCAGCTGTGGGTGCTTGGGTTCCTACTCTCAGGACTCGGTaGGTTTTCTCTGTGACTTGC | + |
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Preference number: 4 (lower is better) Translates to: IGGTQKGRDFPAVGAWVPTLRTR*VFSVTC Trigger: GCAAGTCACAGAGAAAACTCACCGAGTCCTGAGAGT...AGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCTTTCTGTGTTCCACCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR GCA 90 bp | GGAGTCAGACAGGAATGGAAAGCATCACACAGCAGATTTACACAGGCCCAGAAGAACAAGACTCCTCCTTaGCCTCGCAGGTGGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GVRQEWKASHSRFTQAQKNKTPP*PRRWSS Trigger: ACTGCTCCACCTGCGAGGGCAAGGAGGAGTCTTGTT...CTTCTGGGCCTGTGTAAATCTGCTGTGTGATGCTTTCCATTCCTGTCTGACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR CCA 90 bp | CCCAAGTTGCAGATGGAGTCAGACAGGAATGGAAAGCATCACACAGCAGATTTAAGCAGTTGTACAGGATaGTGCTGCCCCGGCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: PKLQMESDRNGKHHTADLSSCTG*CCPGRQ Trigger: CTGTCTGCCGGGGCAGCACCATCCTGTACAACTGCT...TAAATCTGCTGTGTGATGCTTTCCATTCCTGTCTGACTCCATCTGCAACTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CAA 72 bp | AACACAGAAAGGGAGGGACTTTCCAGCTGTGGGTGCTaGGGTTCCTGGAGGCCATCTGACACGAATATTGAT | + |
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Preference number: 4 (lower is better) Translates to: NTEREGLSSCGC*GSWRPSDTNID Trigger: ATCAATATTCGTGTCAGATGGCCTCCAGGAACCCAAGCACCCACAGCTGGAAAGTCCCTCCCTTTCTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR CCA 90 bp | TTCCTGGCATCATCTGCTGCTCTGTTTGATTGGTGGAACACAGAAAGGGAGGGATTCAGGTACTCCACTTaGAGGCTCACAACACCCGAA | + |
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Preference number: 4 (lower is better) Translates to: FLASSAALFDWWNTEREGFRYST*RLTTPE Trigger: TTCGGGTGTTGTGAGCCTCCAAGTGGAGTACCTGAA...TCCCTCCCTTTCTGTGTTCCACCAATCAAACAGAGCAGCAGATGATGCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| 3UTR CAA 72 bp | ATTCCTAAGAATTCCCATCCCATCTGCCTGCCCAAGTaGCAGATGGAGTCAGACAGGAATGGAAAGCATCAC | + |
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Preference number: 4 (lower is better) Translates to: IPKNSHPICLPK*QMESDRNGKHH Trigger: GTGATGCTTTCCATTCCTGTCTGACTCCATCTGCAACTTGGGCAGGCAGATGGGATGGGAATTCTTAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR GCA 90 bp | ATTTCCTGGCATCATCTGCTGCTCTGTTTGATTGGTGGAACACAGAAAGGGAGGGTTTTCTCTGTGACTTaGTTCATTGAGACCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: ISWHHLLLCLIGGTQKGRVFSVT*FIETSS Trigger: AGATGAGGTCTCAATGAAGCAAGTCACAGAGAAAAC...CCTCCCTTTCTGTGTTCCACCAATCAAACAGAGCAGCAGATGATGCCAGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS GCA 90 bp | ACTCCTCCTTGCCCTCGCAGGTGGAGCAGTTGTACAGGATGGTGCTaGCCCGGCAGACAGGAGCACAAAGAGCTTCCCTGGTGTACTGGG | + |
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Preference number: 5 (lower is better) Translates to: TPPCPRRWSSCTGWC*PGRQEHKELPWCTG Trigger: CCCAGTACACCAGGGAAGCTCTTTGTGCTCCTGTCTGCCGGGGCAGCACCATCCTGTACAACTGCTCCACCTGCGAGGGCAAGGAGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS GCA 90 bp | AAGACTCCTCCTTGCCCTCGCAGGTGGAGCAGTTGTACAGGATGGTaGTGCCCCGGCAGACAGGAGCACAAAGAGCTTCCCTGGTGTACT | + |
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Preference number: 5 (lower is better) Translates to: KTPPCPRRWSSCTGW*CPGRQEHKELPWCT Trigger: AGTACACCAGGGAAGCTCTTTGTGCTCCTGTCTGCCGGGGCAGCACCATCCTGTACAACTGCTCCACCTGCGAGGGCAAGGAGGAGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS CCA 90 bp | ACAGGATGGTGCTGCCCCGGCAGACAGGAGCACAAAGAGCTTCCCTaGTGTACTGGGGGATCCTGGTCTTCTGAAGCCATTGCCAGTATA | + |
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Preference number: 5 (lower is better) Translates to: TGWCCPGRQEHKELP*CTGGSWSSEAIASI Trigger: TATACTGGCAATGGCTTCAGAAGACCAGGATCCCCCAGTACACCAGGGAAGCTCTTTGTGCTCCTGTCTGCCGGGGCAGCACCATCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS CCA 90 bp | GGCAGACAGGAGCACAAAGAGCTTCCCTGGTGTACTGGGGGATCCTaGTCTTCTGAAGCCATTGCCAGTATAATGGAATCAAGGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: GRQEHKELPWCTGGS*SSEAIASIMESRRW Trigger: CCACCTCCTTGATTCCATTATACTGGCAATGGCTTCAGAAGACCAGGATCCCCCAGTACACCAGGGAAGCTCTTTGTGCTCCTGTCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS TCA 90 bp | GGAGCACAAAGAGCTTCCCTGGTGTACTGGGGGATCCTGGTCTTCTaGAGCCATTGCCAGTATAATGGAATCAAGGAGGTGGATCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: GAQRASLVYWGILVF*SHCQYNGIKEVDPF Trigger: AAAAGGATCCACCTCCTTGATTCCATTATACTGGCAATGGCTTCAGAAGACCAGGATCCCCCAGTACACCAGGGAAGCTCTTTGTGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS-3UTR CAA 90 bp | TGCAGATGGAGTCAGACAGGAATGGAAAGCATCACACAGCAGATTTACACAGGCTGCCAAGGCATGATCTaGGAGACGACAGAAGATACA | + |
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Preference number: 5 (lower is better) Translates to: CRWSQTGMESITQQIYTGCQGMI*ETTEDT Trigger: TGTATCTTCTGTCGTCTCCAAGATCATGCCTTGGCA...GCCTGTGTAAATCTGCTGTGTGATGCTTTCCATTCCTGTCTGACTCCATCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS GCA 72 bp | GGTAGCAGTGCTTTTGGGGCCAACAAGACTCCTCCTTaGCCTCGCAGGTGGAGCAGTTGTACAGGATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GSSAFGANKTPP*PRRWSSCTGWC Trigger: GCACCATCCTGTACAACTGCTCCACCTGCGAGGGCAAGGAGGAGTCTTGTTGGCCCCAAAAGCACTGCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS CCA 72 bp | TGCTGCCCCGGCAGACAGGAGCACAAAGAGCTTCCCTaGTGTACTGGGGGATCCTGGTCTTCTGAAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: CCPGRQEHKELP*CTGGSWSSEAI Trigger: AATGGCTTCAGAAGACCAGGATCCCCCAGTACACCAGGGAAGCTCTTTGTGCTCCTGTCTGCCGGGGCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS CAA 90 bp | AATCCTAGCGTCCCACAGATCGTGACTGTCTGGGTAGCAGTGCTTTaGGGGCCAACAAGACTCCTCCTTGCCCTCGCAGGTGGAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: NPSVPQIVTVWVAVL*GPTRLLLALAGGAV Trigger: AACTGCTCCACCTGCGAGGGCAAGGAGGAGTCTTGTTGGCCCCAAAAGCACTGCTACCCAGACAGTCACGATCTGTGGGACGCTAGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS CCA 72 bp | AGGCATGATCTTGGAGACGACAGAAGATACAAGCCTTaGCCACGGCCAAGAAAGCCCCACCCAGAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RHDLGDDRRYKP*PRPRKPHPEPA Trigger: TGCTGGCTCTGGGTGGGGCTTTCTTGGCCGTGGCCAAGGCTTGTATCTTCTGTCGTCTCCAAGATCATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS CAA 90 bp | CGTCTGGTTATTGAGCTGAGCCAGGCGGTTTGCCAAGGCATGATCTaGGAGACGACAGAAGATACAAGCCTTGGCCACGGCCAAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RLVIELSQAVCQGMI*ETTEDTSLGHGQES Trigger: GCTTTCTTGGCCGTGGCCAAGGCTTGTATCTTCTGTCGTCTCCAAGATCATGCCTTGGCAAACCGCCTGGCTCAGCTCAATAACCAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS TCA 72 bp | AGAGCTTCCCTGGTGTACTGGGGGATCCTGGTCTTCTaGAGCCATTGCCAGTATAATGGAATCAAGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RASLVYWGILVF*SHCQYNGIKEV Trigger: CACCTCCTTGATTCCATTATACTGGCAATGGCTTCAGAAGACCAGGATCCCCCAGTACACCAGGGAAGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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| CDS CCA 72 bp | CACAAGTCTTTTGCTTGCAGGTTCAGGTACTCCACTTaGAGGCTCACAACACCCGAAAGCAGGACAATTCCG | + |
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Preference number: 6 (lower is better) Translates to: HKSFACRFRYST*RLTTPESRTIP Trigger: CGGAATTGTCCTGCTTTCGGGTGTTGTGAGCCTCCAAGTGGAGTACCTGAACCTGCAAGCAAAAGACTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178597.3 |
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