RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM94 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020747

Ensembl transcript IDs: ENSMUST00000093912.11, ENSMUST00000103033.8, ENSMUST00000103034.10, ENSMUST00000125918.2, ENSMUST00000136720.8, ENSMUST00000141871.8, ENSMUST00000239299.2

Found 569 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTATCCCTTCACCCCGTCCTGGGGGCCACTCATCAGTGTAGAGTaGCGAGAGCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTC +
Preference number: 1 (lower is better)
Translates to: GYPFTPSWGPLISVE*RELQPWEGAFPGCF
Trigger: GAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTACACTGATGAGTGGCCCCCAGGACGGGGTGAAGGGATACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR TCA 90 bp CCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTaGACAGCAGTAGCCTCTGCTTTCCAACAGACACTGAGGCTGCCG +
Preference number: 1 (lower is better)
Translates to: PLPGKMGHGQEDTAS*TAVASAFQQTLRLP
Trigger: CGGCAGCCTCAGTGTCTGTTGGAAAGCAGAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR CCA 90 bp AGGTCTTCGGACCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATaGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCTGCTTT +
Preference number: 1 (lower is better)
Translates to: RSSDHRQALAGEDGT*AGGYSILNSSSLCF
Trigger: AAAGCAGAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGGTCCGAAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR TCA 90 bp AGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTaGAAAAGAAGCCCAAGCCAGGAAGACAATTGTCTCCAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: RAEAGRPWLQPCGFS*KRSPSQEDNCLQCP
Trigger: TGGGCACTGGAGACAATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR GCA 90 bp TCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATCTGTaGAGCAAACCTCCAAGTCCGGGGGTATCCCTTCACCCCGTCCTG +
Preference number: 1 (lower is better)
Translates to: SMKESFHMTGLCLHL*SKPPSPGVSLHPVL
Trigger: CAGGACGGGGTGAAGGGATACCCCCGGACTTGGAGGTTTGCTGCACAGATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR CCA 90 bp GGCCACAGAAGAACCGTCTACCCACTTCCTGCTGGAGGACCCAGTTaGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTA +
Preference number: 1 (lower is better)
Translates to: GHRRTVYPLPAGGPS*SSLGSVTINLFPQL
Trigger: TAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAGTGGGTAGACGGTTCTTCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR TCA 90 bp AGCCTCCAATGCCATGAGGCACAAAGACAAACCCTGAAACATTTGTaGTACCAACTTCCTGGTAGGTCTGGCTCTGTCCCCAGGAAGCTG +
Preference number: 1 (lower is better)
Translates to: SLQCHEAQRQTLKHL*YQLPGRSGSVPRKL
Trigger: CAGCTTCCTGGGGACAGAGCCAGACCTACCAGGAAGTTGGTATCACAAATGTTTCAGGGTTTGTCTTTGTGCCTCATGGCATTGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR CCA 90 bp CCTCTTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTaGGCTGTGTTTGCATCTGTGCAGCAAACCTCCAAGTCCGGGGGT +
Preference number: 1 (lower is better)
Translates to: PLSPTNINERVIPHD*AVFASVQQTSKSGG
Trigger: ACCCCCGGACTTGGAGGTTTGCTGCACAGATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR CCA 90 bp GTAGAGTGCCGAGAGCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGTGTGGTCAGCTGACATaGGGGCCCCAGGGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: VECRELQPWEGAFPGCFMCGQLT*GPQGEV
Trigger: CACCTCACCCTGGGGCCCCCATGTCAGCTGACCACA...CATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR GCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATTCATACATTCAAGAGTaGCCCTGGCAAGGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHSYIQE*PWQGRG
Trigger: TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGA...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR CCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACTGTCCCCAGGAAGCTaGGCAGCTATGGCCACCATG +
Preference number: 2 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLELSPGS*AAMATM
Trigger: CATGGTGGCCATAGCTGCCCAGCTTCCTGGGGACAG...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR CCA 90 bp GTAGAGTGCCGAGAGCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGCCTTGCCGGGGAAGATaGGACATGGGCAGGAGGATA +
Preference number: 2 (lower is better)
Translates to: VECRELQPWEGAFPGCFMPCRGR*DMGRRI
Trigger: TATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG...CATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR CCA 90 bp GTAGAGTGCCGAGAGCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGGGCAGGGTCCTCTGTaGATGACTTGTGGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: VECRELQPWEGAFPGCFMGQGPL*MTCGQL
Trigger: CAGCTGACCACAAGTCATCCACAGAGGACCCTGCCC...CATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR CCA 90 bp AGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGATGTTTAGGGCAAGGGCCACATaGGCCTGGGCAGGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: SPGREPFLAVSWIHHRMFRARAT*AWAGSS
Trigger: AGAGGACCCTGCCCAGGCCCATGTGGCCCTTGCCCT...AAACATCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR TCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATGAGCCTCCAATGCCATaGGGCACAAAGACAAACCCT +
Preference number: 2 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHEPPMP*GTKTNP
Trigger: AGGGTTTGTCTTTGTGCCTCATGGCATTGGAGGCTC...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR TCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGACATGGGGGAGGGGCTaGGGATCCCTTTACCAAGGG +
Preference number: 2 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQTWGRG*GSLYQG
Trigger: CCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGT...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR CCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACTGTCCCCAGGAAGCTaGGCAGCTATGGCCACCATG +
Preference number: 2 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGLSPGS*AAMATM
Trigger: CATGGTGGCCATAGCTGCCCAGCTTCCTGGGGACAG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR CCA 90 bp GCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGAGGCCCCAGGGTGAGGTaGACCTTTTCCATCTTCAAG +
Preference number: 2 (lower is better)
Translates to: AAALGGSLSWLFHGSTTGGPRVR*TFSIFK
Trigger: CTTGAAGATGGAAAAGGTCCACCTCACCCTGGGGCC...TCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR CCA 90 bp AGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGATGTTTAGGGCCACATGGGCCTaGGCAGGGTCCTCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: SPGREPFLAVSWIHHRMFRATWA*AGSSVD
Trigger: ATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCCT...AAACATCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR TCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGCCCTGTGGCTTTTCGTaGAAAAGAAGCCCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: RQALAGEDGTWAGGYSILPCGFS*KRSPSQ
Trigger: CTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGG...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR GCA 90 bp CTTCCTGCTGGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTGCAAGAGCAGAGGGTaGCGAGTGAGGGGGCCCCTA +
Preference number: 2 (lower is better)
Translates to: LPAGGPSWSSLGSVTINLCKSRG*RVRGPL
Trigger: TAGGGGCCCCCTCACTCGGCACCCTCTGCTCTTGCA...GAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR GCA 90 bp CTGTGTTTGCATCTGTGCAGCAAACCTCCAAGTCCGGGGGTATCCCTTCACCCCCTCATCAGTGTAGAGTaGCGAGAGCTGCAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: LCLHLCSKPPSPGVSLHPLISVE*RELQPW
Trigger: CCAGGGCTGCAGCTCTCGGCACTCTACACTGATGAG...GGGGTGAAGGGATACCCCCGGACTTGGAGGTTTGCTGCACAGATGCAAACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR TCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGGAGCCTCCAATGCCATaGGGCACAAAGACAAACCCT +
Preference number: 2 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQEPPMP*GTKTNP
Trigger: AGGGTTTGTCTTTGTGCCTCATGGCATTGGAGGCTC...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR TCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACCCTGTGGCTTTTCGTaGAAAAGAAGCCCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGPCGFS*KRSPSQ
Trigger: CTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR GCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACGGCTGAGCCTCCAATaGCATGAGGCACAAAGACAA +
Preference number: 2 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGRLSLQ*HEAQRQ
Trigger: TTGTCTTTGTGCCTCATGGCATTGGAGGCTCAGCCG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCGAGCCTCCAATGCCATaGGGCACAAAGACAAACCCT +
Preference number: 2 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLEPPMP*GTKTNP
Trigger: AGGGTTTGTCTTTGTGCCTCATGGCATTGGAGGCTC...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCGGCTGAGCCTCCAATaGCATGAGGCACAAAGACAA +
Preference number: 2 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIRLSLQ*HEAQRQ
Trigger: TTGTCTTTGTGCCTCATGGCATTGGAGGCTCAGCCG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR GCA 90 bp CCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAACACCACAGGCAGGCCCTTaGCGGGGAAGATGGGACATG +
Preference number: 2 (lower is better)
Translates to: PSWSSLGSVTINLFPQLTPQAGP*RGRWDM
Trigger: CATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG...TGTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR TCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGCCTTTACCAAGGGCCTaGGGTCATACATTCAAGAGT +
Preference number: 2 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQPLPRA*GHTFKS
Trigger: ACTCTTGAATGTATGACCTCAGGCCCTTGGTAAAGG...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR TCA 90 bp AGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGATGTTTCCTTTACCAAGGGCCTaGGGTCATACATTCAAGAGT +
Preference number: 2 (lower is better)
Translates to: SPGREPFLAVSWIHHRMFPLPRA*GHTFKS
Trigger: ACTCTTGAATGTATGACCTCAGGCCCTTGGTAAAGG...AAACATCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCCTTTACCAAGGGCCTaGGGTCATACATTCAAGAGT +
Preference number: 2 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLPLPRA*GHTFKS
Trigger: ACTCTTGAATGTATGACCTCAGGCCCTTGGTAAAGG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR GCA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATCGGCTGAGCCTCCAATaGCATGAGGCACAAAGACAA +
Preference number: 2 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHRLSLQ*HEAQRQ
Trigger: TTGTCTTTGTGCCTCATGGCATTGGAGGCTCAGCCG...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR GCA 72 bp TTCACCCCGTCCTGGGGGCCACTCATCAGTGTAGAGTaGCGAGAGCTGCAGCCCTGGGAGGGAGCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: FTPSWGPLISVE*RELQPWEGAFP
Trigger: AGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTACACTGATGAGTGGCCCCCAGGACGGGGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR GCA 72 bp GAGGAAGGGAAGGTCTTCGGACCACAGGCAGGCCCTTaGCGGGGAAGATGGGACATGGGCAGGAGGATACAG +
Preference number: 3 (lower is better)
Translates to: EEGKVFGPQAGP*RGRWDMGRRIQ
Trigger: CTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGGTCCGAAGACCTTCCCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR CAA 90 bp CTGTGTTTGCATCTGTGCAGCAAACCTCCAAGTCCGGGGGTATCCCTTCACCCCACCACAGGCAGGCCCTaGCCGGGGAAGATGGGACAT +
Preference number: 3 (lower is better)
Translates to: LCLHLCSKPPSPGVSLHPTTGRP*PGKMGH
Trigger: ATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGGT...GGGGTGAAGGGATACCCCCGGACTTGGAGGTTTGCTGCACAGATGCAAACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR CCA 72 bp GACCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATaGGCAGGAGGATACAGCATCTTGAACAGCAGTAGC +
Preference number: 3 (lower is better)
Translates to: DHRQALAGEDGT*AGGYSILNSSS
Trigger: GCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR CCA 72 bp ATGTCTCCCAGAACAAGGGCAAGGGCCACATGGGCCTaGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCT +
Preference number: 3 (lower is better)
Translates to: MSPRTRARATWA*AGSSVDDLWSA
Trigger: AGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCCTTGCCCTTGTTCTGGGAGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR CAA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGCCAGGAAGACAATaGTCTCCAGTGCCCACGGCT +
Preference number: 3 (lower is better)
Translates to: RQALAGEDGTWAGGYSILKPGRQ*SPVPTA
Trigger: AGCCGTGGGCACTGGAGACAATTGTCTTCCTGGCTT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR CAA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGGAGGATACAGCATCTaGAACAGCAGTAGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTGGYSI*NSSSLC
Trigger: GCAGAGGCTACTGCTGTTCAAGATGCTGTATCCTCC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR CCA 72 bp CCACTCATCAGTGTAGAGTGCCGAGAGCTGCAGCCCTaGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCA +
Preference number: 3 (lower is better)
Translates to: PLISVECRELQP*EGAFPGCFMDP
Trigger: TGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTACACTGATGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR-3UTR CAA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCAAGCCAGGAAGACAATaGTCTCCAGTGCCCACGGCT +
Preference number: 3 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAKPGRQ*SPVPTA
Trigger: AGCCGTGGGCACTGGAGACAATTGTCTTCCTGGCTT...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR TCA 72 bp CAAGCCAGGAAGACAATTGTCTCCAGTGCCCACGGCTaGGCCTCCAATGCCATGAGGCACAAAGACAAACCC +
Preference number: 3 (lower is better)
Translates to: QARKTIVSSAHG*ASNAMRHKDKP
Trigger: GGGTTTGTCTTTGTGCCTCATGGCATTGGAGGCTCAGCCGTGGGCACTGGAGACAATTGTCTTCCTGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR CCA 72 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTaGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: KSRSRQAVATTL*LFVKKKPKPGR
Trigger: TCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR-3UTR CAA 90 bp CTTCCTGCTGGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCAAGCCAGGAAGACAATaGTCTCCAGTGCCCACGGCT +
Preference number: 3 (lower is better)
Translates to: LPAGGPSWSSLGSVTINLKPGRQ*SPVPTA
Trigger: AGCCGTGGGCACTGGAGACAATTGTCTTCCTGGCTT...GAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
3UTR TCA 72 bp GCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTaGAAAAGAAGCCCAAGCCAGGAAGACAATTGTCTC +
Preference number: 3 (lower is better)
Translates to: AGRPWLQPCGFS*KRSPSQEDNCL
Trigger: GAGACAATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR GCA 72 bp AAAAGAAGCCCAAGCCAGGAAGACAATTGTCTCCAGTaGCCACGGCTGAGCCTCCAATGCCATGAGGCACAA +
Preference number: 3 (lower is better)
Translates to: KRSPSQEDNCLQ*PRLSLQCHEAQ
Trigger: TTGTGCCTCATGGCATTGGAGGCTCAGCCGTGGGCACTGGAGACAATTGTCTTCCTGGCTTGGGCTTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR TCA 72 bp GGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTaGACAGCAGTAGCCTCTGCTTTCCAACAGACACTG +
Preference number: 3 (lower is better)
Translates to: GKMGHGQEDTAS*TAVASAFQQTL
Trigger: CAGTGTCTGTTGGAAAGCAGAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR GCA 72 bp GCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCTaGTTTCCAACAGACACTGAGGCTGCCGTAGATGCA +
Preference number: 3 (lower is better)
Translates to: AGGYSILNSSSL*FPTDTEAAVDA
Trigger: TGCATCTACGGCAGCCTCAGTGTCTGTTGGAAAGCAGAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR CCA 72 bp AGAACCGTCTACCCACTTCCTGCTGGAGGACCCAGTTaGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTT +
Preference number: 3 (lower is better)
Translates to: RTVYPLPAGGPS*SSLGSVTINLF
Trigger: AAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAGTGGGTAGACGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGGGGGCGCCGCTTGGTaGCACAGGAGGGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEGGAAW*HRRASP
Trigger: TGGGGAGGCCCTCCTGTGTCACCAAGCGGCGCCCCC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGCTGAGGAGCAGTTGGTaGGGTTGCGGGCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILLRSSW*GCGPGR
Trigger: GCGCCCGGGCCCGCAACCTCACCAACTGCTCCTCAG...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTAGGCCCCAGGGCACGTaGACGGGCAGCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASRPQGT*TGSTAL
Trigger: CAGCGCTGTGCTGCCCGTGCACGTGCCCTGGGGCCT...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGAACCAGCTCCACGCCCTaGCTCCCAGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AAALGGSLSWLFHGSTTGTSSTP*LPAGWP
Trigger: GGGCCAGCCAGCTGGGAGCCAGGGCGTGGAGCTGGT...TCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCATTGTCCAGAGCCGTaGCGGGGCGGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASHCPEP*RGGTGL
Trigger: CAGCCCTGTCCCGCCCCGTCACGGCTCTGGACAATG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCGCTTCAGCCGGTCTTaGCGCCCGATGAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHRFSRS*RPMRTR
Trigger: CCTCGTCCTCATCGGGCGGCAAGACCGGCTGAAGCG...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGCCCTGGCTCCCAGCTaGCTGGCCCCCACAGCAACA +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILALAPS*LAPTAT
Trigger: TGTTGCTGTGGGGGCCAGCCAGCTGGGAGCCAGGGC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATGGAGGGCCTCCCCAATaGCGTCTCCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHGGPPQ*RLLQGL
Trigger: GAGACCCTGAAGGAGACGTCATTGGGGAGGCCCTCC...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGGGGGCGCCGCTTGGTaGCACAGGAGGGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQGGAAW*HRRASP
Trigger: TGGGGAGGCCCTCCTGTGTCACCAAGCGGCGCCCCC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGGGGGCGCCGCTTGGTaGCACAGGAGGGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIGGAAW*HRRASP
Trigger: TGGGGAGGCCCTCCTGTGTCACCAAGCGGCGCCCCC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCAGGGGTGCAGTCGGTaGAGAGGGGCACCAGCAACG +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASQGCSR*RGAPAT
Trigger: CGTTGCTGGTGCCCCTCTTCACCGACTGCACCCCTG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGACGCTTCAGCCGGTCTTaGCGCCCGATGAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: AAALGGSLSWLFHGSTTGRFSRS*RPMRTR
Trigger: CCTCGTCCTCATCGGGCGGCAAGACCGGCTGAAGCG...TCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACACGGAAGAGCCGGTGTTaGTGGGGGTTCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTRKSRC*WGFCGP
Trigger: AGGGCCACAGAACCCCCAGCAACACCGGCTCTTCCG...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCAGGCCCCAGGGCACGTaGACGGGCAGCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEARPQGT*TGSTAL
Trigger: CAGCGCTGTGCTGCCCGTGCACGTGCCCTGGGGCCT...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACATCAGGGTCTCTGCACTaGGGAGGCGGTAGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTSGSLH*GGGRAP
Trigger: TGGCGCTCTACCGCCTCCCCAGTGCAGAGACCCTGA...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATTCAGGGTCTCTGCACTaGGGAGGCGGTAGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHSGSLH*GGGRAP
Trigger: TGGCGCTCTACCGCCTCCCCAGTGCAGAGACCCTGA...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACACAGCATGGCTGGGGCTaGAGGGAGGGATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTQHGWG*REGSQS
Trigger: GCTCTGAGATCCCTCCCTCCAGCCCCAGCCATGCTG...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAGGCCATCCGAGGCCTaGGCCATGGTGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILRPSEA*AMVVLV
Trigger: CACCAGCACCACCATGGCCCAGGCCTCGGATGGCCT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGGCACAGGCGCTCAGTaGCACTGGCGTTACACAGGT +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTGTGAQ*HWRYTG
Trigger: ACCTGTGTAACGCCAGTGTCACTGAGCGCCTGTGCC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCGATGCACTTGCCGTTaGGCTGAGAGGACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHRCTCR*AERTAC
Trigger: GCACGCTGTCCTCTCAGCTCAACGGCAAGTGCATCG...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGCTGAGGAGCAGTTGGTaGGGTTGCGGGCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKLRSSW*GCGPGR
Trigger: GCGCCCGGGCCCGCAACCTCACCAACTGCTCCTCAG...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCGGAAGAGCCGGTGTTaGTGGGGGTTCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASRKSRC*WGFCGP
Trigger: AGGGCCACAGAACCCCCAGCAACACCGGCTCTTCCG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAAGCTGGGGGAAGCCTTaGTCATCTGGGCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTSWGKP*SSGPGH
Trigger: GTGTCCTGGCCCAGATGAGCAAGGCTTCCCCCAGCT...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGTCCCAGGCTGAGCCTTaGTGGGCTCTTCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILSQAEP*WALPLR
Trigger: GCGGAGAGGAAGAGCCCAGCAAGGCTCAGCCTGGGA...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTAGGCCCCAGGGCACGTaGACGGGCAGCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIRPQGT*TGSTAL
Trigger: CAGCGCTGTGCTGCCCGTGCACGTGCCCTGGGGCCT...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGAGGCCCCGGGCCAGTaGAAACAGGAGCAGCGGTTA +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASEAPGQ*KQEQRL
Trigger: TAACCGCTGCTCCTGTTTCCACTGGCCCGGGGCCTC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCGCCCTGGCTCCCAGCTaGCTGGCCCCCACAGCAACA +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAALAPS*LAPTAT
Trigger: TGTTGCTGTGGGGGCCAGCCAGCTGGGAGCCAGGGC...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCACCAGCTCCACGCCCTaGCTCCCAGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLTSSTP*LPAGWP
Trigger: GGGCCAGCCAGCTGGGAGCCAGGGCGTGGAGCTGGT...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTACCAGCTCCACGCCCTaGCTCCCAGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYITSSTP*LPAGWP
Trigger: GGGCCAGCCAGCTGGGAGCCAGGGCGTGGAGCTGGT...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACACAGGCTGAGCCTTGCTaGGCTCTTCCTCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTQAEPC*ALPLRL
Trigger: AAGGCGGAGAGGAAGAGCCCAGCAAGGCTCAGCCTG...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCACGAGGGGTTCTGTTaGTCCTGGGACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHHEGFC*SWDRLS
Trigger: GCTGAGCCTGTCCCAGGACCAACAGAACCCCTCGTG...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATGGCGTGAGGGAGATGTaGCAGTTCCAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHGVREM*QFQPVS
Trigger: GGAGACAGGCTGGAACTGCCACATCTCCCTCACGCC...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAAGGCCTGGGCCATGGTaGTGCTGGTGGCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTRPGPW*CWWHSQ
Trigger: TTGGCTATGCCACCAGCACCACCATGGCCCAGGCCT...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATAGGCCTGGGCCATGGTaGTGCTGGTGGCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHRPGPW*CWWHSQ
Trigger: TTGGCTATGCCACCAGCACCACCATGGCCCAGGCCT...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCATTGTCCAGAGCCGTaGCGGGGCGGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIHCPEP*RGGTGL
Trigger: CAGCCCTGTCCCGCCCCGTCACGGCTCTGGACAATG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGCATTGTCCAGAGCCGTaGCGGGGCGGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKHCPEP*RGGTGL
Trigger: CAGCCCTGTCCCGCCCCGTCACGGCTCTGGACAATG...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGGTGGTTCTCCTGCTTaGAGAGCTCCTTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILGGSPA*RAPWPL
Trigger: CAGGGGCCAAGGAGCTCTTCAAGCAGGAGAACCACC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGGAGGGCCTCCCCAATaGCGTCTCCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEGGPPQ*RLLQGL
Trigger: GAGACCCTGAAGGAGACGTCATTGGGGAGGCCCTCC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCGATGCACTTGCCGTTaGGCTGAGAGGACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASRCTCR*AERTAC
Trigger: GCACGCTGTCCTCTCAGCTCAACGGCAAGTGCATCG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATGCAGCTCGCACATGGTaGATATGCTGTTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHAARTW*ICCSGR
Trigger: CCGGCCAGAACAGCATATTCACCATGTGCGAGCTGC...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAAGGACACCATGCCCATaGAGATCTGACCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTRTPCP*RSDRSG
Trigger: CCCTGAGCGGTCAGATCTTCATGGGCATGGTGTCCT...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGTCACCGTTGGGCGTaGGGGAGATGTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASCHRWA*GRCGSS
Trigger: GGAACTGCCACATCTCCCTCACGCCCAACGGTGACA...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATAGCAAGGCAGGCTGTTaGGCTGCCCTGATAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHSKAGC*AALIAA
Trigger: TGCAGCTATCAGGGCAGCTCAACAGCCTGCCTTGCT...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAAGCAAGGCAGGCTGTTaGGCTGCCCTGATAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTSKAGC*AALIAA
Trigger: TGCAGCTATCAGGGCAGCTCAACAGCCTGCCTTGCT...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CTTCCTGCTGGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCCTGAGGAGCAGTTGGTaGGGTTGCGGGCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: LPAGGPSWSSLGSVTINLLRSSW*GCGPGR
Trigger: GCGCCCGGGCCCGCAACCTCACCAACTGCTCCTCAG...GAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGCCAAAGTGGACACGTaGGTCCCTGTGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTAKVDT*VPVCPQ
Trigger: CTGTGGACACACAGGGACTCACGTGTCCACTTTGGC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGGACGTGACCCCAGGTaGCTTGAACATGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTGRDPR*LEHEAQ
Trigger: CTGCGCTTCATGTTCAAGGCACCTGGGGTCACGTCC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAGCTGGGGGAAGCCTTaGTCATCTGGGCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILSWGKP*SSGPGH
Trigger: GTGTCCTGGCCCAGATGAGCAAGGCTTCCCCCAGCT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACACCTGCAGGGCGATGTTaGACAGGTGGTCGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTPAGRC*TGGRKS
Trigger: GCTTTTCCGACCACCTGTGCAACATCGCCCTGCAGG...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGCCAGGTGGTTCTCCTaGTTGAAGAGCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTARWFS*LKSSLA
Trigger: GGCCAAGGAGCTCTTCAAGCAGGAGAACCACCTGGC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCCATGGGACAGCATCTaGTCTGTGCTGGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHPWDSI*SVLVAV
Trigger: CACTGCCACCAGCACAGAGCAGATGCTGTCCCATGG...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCGACCACGTCGGCACTaGCATGGGACAGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASRPRRH*HGTASA
Trigger: AGCAGATGCTGTCCCATGGCAGTGCCGACGTGGTCG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCCTGGGCCATGGTGGTaGTGGTGGCATAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASPGPWW*WWHSQR
Trigger: CCTTTGGCTATGCCACCAGCACCACCATGGCCCAGG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAAGCTGCCCTGATAGCTaGAGGGGAGAAAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTSCPDS*RGERPS
Trigger: GGATGGCCTTTCTCCCCTGCAGCTATCAGGGCAGCT...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACACTGTGTGTCCACAGCTaGAGGTCCACCACTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTLCVHS*RSTTVW
Trigger: CCAGACAGTGGTGGACCTGCAGCTGTGGACACACAG...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGGCCCTGGCTCCCAGCTaGCTGGCCCCCACAGCAACA +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKALAPS*LAPTAT
Trigger: TGTTGCTGTGGGGGCCAGCCAGCTGGGAGCCAGGGC...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAAGAGCAGGGGGAGGATaGGCAACATGCCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTRAGGG*ATCRSP
Trigger: AGGTGAACGGCATGTTGCCCATCCTCCCCCTGCTCT...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GTAGAGTGCCGAGAGCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGTGTCCTCTGAGAACTTaGCCAGCAGGGAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VECRELQPWEGAFPGCFMCPLRT*PAGSWG
Trigger: CCCCCAGCTCCCTGCTGGCCAAGTTCTCAGAGGACA...CATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAGGGCATCGTGTTCATaGGGCTCCTCCTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILRASCS*GSSSTS
Trigger: CGAGGTGGAGGAGGAGCCCCATGAACACGATGCCCT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CTGTGTTTGCATCTGTGCAGCAAACCTCCAAGTCCGGGGGTATCCCTTCACCCCGGCAGCACAGCGCTGTaGCTCTCCTGCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: LCLHLCSKPPSPGVSLHPGSTAL*LSCRAM
Trigger: CATCGCCCTGCAGGAGAGCCACAGCGCTGTGCTGCC...GGGGTGAAGGGATACCCCCGGACTTGGAGGTTTGCTGCACAGATGCAAACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCGGCAGCACAGCGCTGTaGCTCTCCTGCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAGSTAL*LSCRAM
Trigger: CATCGCCCTGCAGGAGAGCCACAGCGCTGTGCTGCC...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGCTGCGGCGGTTGTTTaGCTTGATGGGGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTAAAVV*LDGDGA
Trigger: AGCACCATCCCCATCAAGCCAAACAACCGCCGCAGC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTAGGCCTGGGCCATGGTaGTGCTGGTGGCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASRPGPW*CWWHSQ
Trigger: TTGGCTATGCCACCAGCACCACCATGGCCCAGGCCT...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR CAA 72 bp AGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGCCCTaGCCGGGGAAGATGGGACATGGGCAGGAGGATACA +
Preference number: 4 (lower is better)
Translates to: RGREGLRTTGRP*PGKMGHGQEDT
Trigger: TGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGGTCCGAAGACCTTCCCTTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGCTCCACCTTCCCACTaGAGAAGAGCACGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASAPPSH*RRARSL
Trigger: CAGAGACCGTGCTCTTCTTCAGTGGGAAGGTGGAGC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAATGGACAGGTCGTCTGTaGGGTCCTCGTGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEWTGRL*GPRGCC
Trigger: ACAGCAGCCACGAGGACCTCACAGACGACCTGTCCA...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACACTTCAGTGTCCCTGCTaGAACTCACGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTLQCPC*NSRWSQ
Trigger: CTGGCTCCAACGTGAGTTTCAGCAGGGACACTGAAG...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGGCGGTTGTTTGGCTTaGTGGGGATGGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEGGCLA*WGWCWA
Trigger: TGCCCAGCACCATCCCCATCAAGCCAAACAACCGCC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTAGGACACCATGCCCATaGAGATCTGACCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASRTPCP*RSDRSG
Trigger: CCCTGAGCGGTCAGATCTTCATGGGCATGGTGTCCT...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCAGGGGTGCAGTCGGTaGAGAGGGGCACCAGCAACG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLQGCSR*RGAPAT
Trigger: CGTTGCTGGTGCCCCTCTTCACCGACTGCACCCCTG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCAGGGGTGCAGTCGGTaGAGAGGGGCACCAGCAACG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIQGCSR*RGAPAT
Trigger: CGTTGCTGGTGCCCCTCTTCACCGACTGCACCCCTG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGCAATCAGGGCGGCTGTaGGCTTCTGAGCGGATAGCA +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILQSGRL*ASERIA
Trigger: TGCTATCCGCTCAGAAGCTCACAGCCGCCCTGATTG...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GTAGAGTGCCGAGAGCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGGACGTGACCCCAGGTaGCTTGAACATGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: VECRELQPWEGAFPGCFMGRDPR*LEHEAQ
Trigger: CTGCGCTTCATGTTCAAGGCACCTGGGGTCACGTCC...CATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp CTGTGTTTGCATCTGTGCAGCAAACCTCCAAGTCCGGGGGTATCCCTTCACCCCTCCCAGGCTGAGCCTTaGTGGGCTCTTCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: LCLHLCSKPPSPGVSLHPSQAEP*WALPLR
Trigger: GCGGAGAGGAAGAGCCCAGCAAGGCTCAGCCTGGGA...GGGGTGAAGGGATACCCCCGGACTTGGAGGTTTGCTGCACAGATGCAAACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCGCGCTGTGGCTCTCCTaGAGGGCGATGTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAALWLS*RAMLHR
Trigger: CCTGTGCAACATCGCCCTGCAGGAGAGCCACAGCGC...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGCCAGGTGGTTCTCCTaGTTGAAGAGCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILARWFS*LKSSLA
Trigger: GGCCAAGGAGCTCTTCAAGCAGGAGAACCACCTGGC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACGACCACGTCGGCACTaGCATGGGACAGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLERPRRH*HGTASA
Trigger: AGCAGATGCTGTCCCATGGCAGTGCCGACGTGGTCG...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGACATCCCAGAAGTCTGTaGAGGCCTCCACGACCACGT +
Preference number: 4 (lower is better)
Translates to: AAALGGSLSWLFHGSTTGHPRSL*RPPRPR
Trigger: ACGTGGTCGTGGAGGCCTGCACAGACTTCTGGGATG...TCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCATCCCAGAAGTCTGTaGAGGCCTCCACGACCACGT +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASHPRSL*RPPRPR
Trigger: ACGTGGTCGTGGAGGCCTGCACAGACTTCTGGGATG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAGGAAGAGGCAGCTGTTaGGCAGGTTGGCCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGGRGSC*AGWPSS
Trigger: GGAGCTCGGCCAACCTGCGCAACAGCTGCCTCTTCC...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCGGAAGAGGCAGCTGTTaGGCAGGTTGGCCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAGRGSC*AGWPSS
Trigger: GGAGCTCGGCCAACCTGCGCAACAGCTGCCTCTTCC...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAGGAGCGGTGGCAGCTaGACCAGACAAGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILRSGGS*TRQDRN
Trigger: GTTCCTGTCTTGTCTGGTGCAGCTGCCACCGCTCCT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTGGCTCCCAGCTGGCTaGCCCCCACAGCAACACAAC +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQWLPAG*PPQQHN
Trigger: GTTGTGTTGCTGTGGGGGCCAGCCAGCTGGGAGCCA...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGCACGGTCTCTGGGCTaGGGTTTGGCCATGATAGGA +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILARSLG*GLAMIG
Trigger: TCCTATCATGGCCAAACCCCAGCCCAGAGACCGTGC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGGGTTCTGTTGGTCCTaGGACAGGCTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASGFCWS*DRLSIS
Trigger: GGAGATGCTGAGCCTGTCCCAGGACCAACAGAACCC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GTAGAGTGCCGAGAGCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGCGATGTTGCACAGGTaGTCGGAAAAGCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: VECRELQPWEGAFPGCFMAMLHR*SEKRHR
Trigger: CCTGTGCCGCTTTTCCGACCACCTGTGCAACATCGC...CATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGGGCAGCACAGCGCTGTaGCTCTCCTGCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKGSTAL*LSCRAM
Trigger: CATCGCCCTGCAGGAGAGCCACAGCGCTGTGCTGCC...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAATGTCCAGCCGGGCCTaGTACTGGGAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEMSSRA*YWEDTM
Trigger: CATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACAT...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACAGCATGGCTGGGGCTaGAGGGAGGGATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGQHGWG*REGSQS
Trigger: GCTCTGAGATCCCTCCCTCCAGCCCCAGCCATGCTG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGAGGTACTCAGGAGCGGTaGCAGCTGCACCAGACAAGA +
Preference number: 4 (lower is better)
Translates to: AAALGGSLSWLFHGSTTGGTQER*QLHQTR
Trigger: TCTTGTCTGGTGCAGCTGCCACCGCTCCTGAGTACC...TCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGGTACTCAGGAGCGGTaGCAGCTGCACCAGACAAGA +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILGTQER*QLHQTR
Trigger: TCTTGTCTGGTGCAGCTGCCACCGCTCCTGAGTACC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCAGGCCTCAGGGCTATaGTGTCTCCTTCTACCAACA +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHQASGL*CLLLPT
Trigger: TGTTGGTAGAAGGAGACATCATAGCCCTGAGGCCTG...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGATGGACAGGTCGTCTGTaGGGTCCTCGTGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGWTGRL*GPRGCC
Trigger: ACAGCAGCCACGAGGACCTCACAGACGACCTGTCCA...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGCTTCAGTGTCCCTGCTaGAACTCACGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILLQCPC*NSRWSQ
Trigger: CTGGCTCCAACGTGAGTTTCAGCAGGGACACTGAAG...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGCGATGCACTTGCCGTTaGGCTGAGAGGACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQRCTCR*AERTAC
Trigger: GCACGCTGTCCTCTCAGCTCAACGGCAAGTGCATCG...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAATGCCCATGAAGATCTaGCCGCTCAGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEMPMKI*PLRACM
Trigger: CATGCAGGCCCTGAGCGGTCAGATCTTCATGGGCAT...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGCCAAAGTGGACACGTaGGTCCCTGTGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEAKVDT*VPVCPQ
Trigger: CTGTGGACACACAGGGACTCACGTGTCCACTTTGGC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAAATACAGCCTCCAGCTaGTCCTTCAGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTNTASS*SFRTLR
Trigger: CCTCAGTGTCCTGAAGGAGCAGCTGGAGGCTGTATT...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCAGGGACCAGGAAGGTaGAAAGGGCATATGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASQGPGR*KGHMEV
Trigger: GACCTCCATATGCCCTTTGCACCTTCCTGGTCCCTG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGATGTTTCGGAAGAGCCGGTGTTaGTGGGGGTTCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPGREPFLAVSWIHHRMFRKSRC*WGFCGP
Trigger: AGGGCCACAGAACCCCCAGCAACACCGGCTCTTCCG...AAACATCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGTCACTGCGCTCCTaGTCGTTGGAAAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEQSLRS*SLERCR
Trigger: CCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTG...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGTCCCAGGCTGAGCCTTaGTGGGCTCTTCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKSQAEP*WALPLR
Trigger: GCGGAGAGGAAGAGCCCAGCAAGGCTCAGCCTGGGA...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGCGCTGTGGCTCTCCTaGAGGGCGATGTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQALWLS*RAMLHR
Trigger: CCTGTGCAACATCGCCCTGCAGGAGAGCCACAGCGC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGCTGAGAGGACAGCGTaGAGTTCATGGGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILAERTA*SSWACR
Trigger: CCTACAAGCCCATGAACTGCACGCTGTCCTCTCAGC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGGCAGCTTGGCCCGGTTaGAGTCTTCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQAAWPG*SLPGSW
Trigger: CCAGCTTCCTGGAAGACTGCAACCGGGCCAAGCTGC...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGGAAGAGGCAGCTGTTaGGCAGGTTGGCCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQGRGSC*AGWPSS
Trigger: GGAGCTCGGCCAACCTGCGCAACAGCTGCCTCTTCC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CTGTGTTTGCATCTGTGCAGCAAACCTCCAAGTCCGGGGGTATCCCTTCACCCCCCTGGGCCATGGTGGTaGTGGTGGCATAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LCLHLCSKPPSPGVSLHPPGPWW*WWHSQR
Trigger: CCTTTGGCTATGCCACCAGCACCACCATGGCCCAGG...GGGGTGAAGGGATACCCCCGGACTTGGAGGTTTGCTGCACAGATGCAAACACAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAAGCTGCCCTGATAGCTaGAGGGGAGAAAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLESCPDS*RGERPS
Trigger: GGATGGCCTTTCTCCCCTGCAGCTATCAGGGCAGCT...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAAGGAGCGGTGGCAGCTaGACCAGACAAGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLERSGGS*TRQDRN
Trigger: GTTCCTGTCTTGTCTGGTGCAGCTGCCACCGCTCCT...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCGAGGCCCCGGGCCAGTaGAAACAGGAGCAGCGGTTA +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLEAPGQ*KQEQRL
Trigger: TAACCGCTGCTCCTGTTTCCACTGGCCCGGGGCCTC...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTTGGCTCCCAGCTGGCTaGCCCCCACAGCAACACAAC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIWLPAG*PPQQHN
Trigger: GTTGTGTTGCTGTGGGGGCCAGCCAGCTGGGAGCCA...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCTGGCTCCCAGCTGGCTaGCCCCCACAGCAACACAAC +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLWLPAG*PPQQHN
Trigger: GTTGTGTTGCTGTGGGGGCCAGCCAGCTGGGAGCCA...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGAAGCCTTGCTCATCTaGGCCAGGACACGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASEALLI*ARTRAS
Trigger: AGAAGCTCGTGTCCTGGCCCAGATGAGCAAGGCTTC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTGTCCTCTGAGAACTTaGCCAGCAGGGAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQCPLRT*PAGSWG
Trigger: CCCCCAGCTCCCTGCTGGCCAAGTTCTCAGAGGACA...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGCGATGTTGCACAGGTaGTCGGAAAAGCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEAMLHR*SEKRHR
Trigger: CCTGTGCCGCTTTTCCGACCACCTGTGCAACATCGC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGAGCTCCTTGGCCCCTaGAGTGAAACCTATGAGCCG +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEELLGP*SETYEP
Trigger: CGGCTCATAGGTTTCACTCCAGGGGCCAAGGAGCTC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAGGCGTGAGGGAGATGTaGCAGTTCCAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGGVREM*QFQPVS
Trigger: GGAGACAGGCTGGAACTGCCACATCTCCCTCACGCC...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCAGCATGGCTGGGGCTaGAGGGAGGGATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLQHGWG*REGSQS
Trigger: GCTCTGAGATCCCTCCCTCCAGCCCCAGCCATGCTG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGGGCCATGGTGGTGCTaGTGGCATAGCCAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEGPWWC*WHSQRS
Trigger: AGACCTTTGGCTATGCCACCAGCACCACCATGGCCC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGGTACTCAGGAGCGGTaGCAGCTGCACCAGACAAGA +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEGTQER*QLHQTR
Trigger: TCTTGTCTGGTGCAGCTGCCACCGCTCCTGAGTACC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAAGGAGCAGCGGTTACTaGGGTGCAGGAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGRSSGY*GAGSCF
Trigger: GAAGCAGCTTCCTGCACCTCAGTAACCGCTGCTCCT...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCTTGGATTTGGTCGATaGTCCCCCGGAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYILGFGR*SPGACA
Trigger: AGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCTTGGATTTGGTCGATaGTCCCCCGGAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLLGFGR*SPGACA
Trigger: AGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGCTTGGATTTGGTCGATaGTCCCCCGGAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQLGFGR*SPGACA
Trigger: AGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAG...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGGCTGAGAGTGTCCTCTaGGAACTTGGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQAESVL*ELGQQG
Trigger: TCCCTGCTGGCCAAGTTCTCAGAGGACACTCTCAGC...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTCAGTGTAGCTGCTaGGAGTGTCCTCTGAGAACT +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHLQCSC*ECPLRT
Trigger: AGTTCTCAGAGGACACTCTCAGCAGCTACACTGAAG...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACACTTCAGTGTAGCTGCTaGGAGTGTCCTCTGAGAACT +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTLQCSC*ECPLRT
Trigger: AGTTCTCAGAGGACACTCTCAGCAGCTACACTGAAG...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGCAGCGCAGCATCTCCTaGGAGGAGACGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKQRSIS*EETASV
Trigger: CACTGAAGCCGTCTCCTCTCAGGAGATGCTGCGCTG...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCAGCGCAGCATCTCCTaGGAGGAGACGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIQRSIS*EETASV
Trigger: CACTGAAGCCGTCTCCTCTCAGGAGATGCTGCGCTG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCAGCGCAGCATCTCCTaGGAGGAGACGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLQRSIS*EETASV
Trigger: CACTGAAGCCGTCTCCTCTCAGGAGATGCTGCGCTG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGGCACAGGCGCTCAGTaGCACTGGCGTTACACAGGT +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIGTGAQ*HWRYTG
Trigger: ACCTGTGTAACGCCAGTGTCACTGAGCGCCTGTGCC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGGTGGTTCTCCTGCTTaGAGAGCTCCTTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQGGSPA*RAPWPL
Trigger: CAGGGGCCAAGGAGCTCTTCAAGCAGGAGAACCACC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCGCAGCTCGCACATGGTaGATATGCTGTTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAAARTW*ICCSGR
Trigger: CCGGCCAGAACAGCATATTCACCATGTGCGAGCTGC...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGGCGGTTGTTTGGCTTaGTGGGGATGGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIGGCLA*WGWCWA
Trigger: TGCCCAGCACCATCCCCATCAAGCCAAACAACCGCC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTTGTCACCGTTGGGCGTaGGGGAGATGTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYICHRWA*GRCGSS
Trigger: GGAACTGCCACATCTCCCTCACGCCCAACGGTGACA...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTCATCTCGGGACACCTaGTTCAGGTCGTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASSSRDT*FRSSWR
Trigger: TCTCCATGACGACCTGAATCAGGTGTCCCGAGATGA...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGTCATCTCGGGACACCTaGTTCAGGTCGTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILSSRDT*FRSSWR
Trigger: TCTCCATGACGACCTGAATCAGGTGTCCCGAGATGA...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAAGCAAGGCAGGCTGTTaGGCTGCCCTGATAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGSKAGC*AALIAA
Trigger: TGCAGCTATCAGGGCAGCTCAACAGCCTGCCTTGCT...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAGACAAGACAGGAACTaGATGACCACGAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILRQDRN*MTTRVS
Trigger: GCTGACCCTCGTGGTCATTCAGTTCCTGTCTTGTCT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGCTGCAAAGCATGACTaGGGAGCAGTTGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASAAKHD*GAVGEV
Trigger: AACCTCACCAACTGCTCCTCAGTCATGCTTTGCAGC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACAATCAGGGCGGCTGTaGGCTTCTGAGCGGATAGCA +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGQSGRL*ASERIA
Trigger: TGCTATCCGCTCAGAAGCTCACAGCCGCCCTGATTG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTAATACAGCCTCCAGCTaGTCCTTCAGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASNTASS*SFRTLR
Trigger: CCTCAGTGTCCTGAAGGAGCAGCTGGAGGCTGTATT...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGATGTTTAGCTGGGGGAAGCCTTaGTCATCTGGGCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: SPGREPFLAVSWIHHRMFSWGKP*SSGPGH
Trigger: GTGTCCTGGCCCAGATGAGCAAGGCTTCCCCCAGCT...AAACATCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACACAGACGGGTGTTTGCTaGGGCCATGTCCTTTATGAT +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTQTGVC*GHVLYD
Trigger: ATCATAAAGGACATGGCCGCAGCAAACACCCGTCTG...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCTCCTTCAGGGTCTCTaGACTGGGGAGGCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYILLQGL*TGEAVE
Trigger: CTCTACCGCCTCCCCAGTGCAGAGACCCTGAAGGAG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGCTCCTTCAGGGTCTCTaGACTGGGGAGGCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKLLQGL*TGEAVE
Trigger: CTCTACCGCCTCCCCAGTGCAGAGACCCTGAAGGAG...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGCCATGGGACAGCATCTaGTCTGTGCTGGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQPWDSI*SVLVAV
Trigger: CACTGCCACCAGCACAGAGCAGATGCTGTCCCATGG...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGATGTTTCGACCACGTCGGCACTaGCATGGGACAGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SPGREPFLAVSWIHHRMFRPRRH*HGTASA
Trigger: AGCAGATGCTGTCCCATGGCAGTGCCGACGTGGTCG...AAACATCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTTTCTGGCCGGGGACCTaGACCAGCTCGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIFWPGT*TSSMHL
Trigger: CAAGTGCATCGAGCTGGTGCAGGTCCCCGGCCAGAA...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCTTCTGGCCGGGGACCTaGACCAGCTCGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLFWPGT*TSSMHL
Trigger: CAAGTGCATCGAGCTGGTGCAGGTCCCCGGCCAGAA...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCAGGCCCATCTTCTCTaGAAACACCTTGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASQAHLL*KHLAPE
Trigger: CTCAGGAGCAAGGTGTTTGCAGAGAAGATGGGCCTG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGCAGCTTGGCCCGGTTaGAGTCTTCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQAAWPG*SLPGSW
Trigger: CCAGCTTCCTGGAAGACTGCAACCGGGCCAAGCTGC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGCAGCTTGGCCCGGTTaGAGTCTTCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIAAWPG*SLPGSW
Trigger: CCAGCTTCCTGGAAGACTGCAACCGGGCCAAGCTGC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCCTGGGCCATGGTGGTaGTGGTGGCATAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLPGPWW*WWHSQR
Trigger: CCTTTGGCTATGCCACCAGCACCACCATGGCCCAGG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CTGTGTTTGCATCTGTGCAGCAAACCTCCAAGTCCGGGGGTATCCCTTCACCCCCTGTGTGTCCACAGCTaGAGGTCCACCACTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LCLHLCSKPPSPGVSLHPLCVHS*RSTTVW
Trigger: CCAGACAGTGGTGGACCTGCAGCTGTGGACACACAG...GGGGTGAAGGGATACCCCCGGACTTGGAGGTTTGCTGCACAGATGCAAACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACTGTGTGTCCACAGCTaGAGGTCCACCACTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGLCVHS*RSTTVW
Trigger: CCAGACAGTGGTGGACCTGCAGCTGTGGACACACAG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGTCTCCCGCGCTGCTGTaGTTGCCCTGGTTGGGTATC +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKSPALL*LPWLGI
Trigger: GATACCCAACCAGGGCAAGCACAGCAGCGCGGGAGA...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATTCCCTGAGAGCATCTTaGATTTGGTCGATGATCCCC +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHSLRAS*IWSMIP
Trigger: GGGGATCATCGACCAAATCCAAGATGCTCTCAGGGA...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGGTGCAAAGGGCATATaGAGGTCTGGATACATGGAG +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTGAKGI*RSGYME
Trigger: CTCCATGTATCCAGACCTCCATATGCCCTTTGCACC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACCGTTCACCTGGAGCTaGAGAAGGGTGTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGPFTWS*RRVYCQ
Trigger: CTGGCAGTACACCCTTCTCCAGCTCCAGGTGAACGG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCAGAGCAGGGGGAGGATaGGCAACATGCCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEARAGGG*ATCRSP
Trigger: AGGTGAACGGCATGTTGCCCATCCTCCCCCTGCTCT...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCTGGCCAGCAGGGAGCTaGGGGAAGCCTTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLWPAGS*GKPCSS
Trigger: AGATGAGCAAGGCTTCCCCCAGCTCCCTGCTGGCCA...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGTGGCCAGCAGGGAGCTaGGGGAAGCCTTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQWPAGS*GKPCSS
Trigger: AGATGAGCAAGGCTTCCCCCAGCTCCCTGCTGGCCA...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTTGTCCTCTGAGAACTTaGCCAGCAGGGAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYICPLRT*PAGSWG
Trigger: CCCCCAGCTCCCTGCTGGCCAAGTTCTCAGAGGACA...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAGCACGGTCTCTGGGCTaGGGTTTGGCCATGATAGGA +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGARSLG*GLAMIG
Trigger: TCCTATCATGGCCAAACCCCAGCCCAGAGACCGTGC...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGATGTTTAGGGCATCGTGTTCATaGGGCTCCTCCTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: SPGREPFLAVSWIHHRMFRASCS*GSSSTS
Trigger: CGAGGTGGAGGAGGAGCCCCATGAACACGATGCCCT...AAACATCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGAGGGCATCGTGTTCATaGGGCTCCTCCTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQRASCS*GSSSTS
Trigger: CGAGGTGGAGGAGGAGCCCCATGAACACGATGCCCT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGCAGGCTGAGCCTTGCTaGGCTCTTCCTCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKQAEPC*ALPLRL
Trigger: AAGGCGGAGAGGAAGAGCCCAGCAAGGCTCAGCCTG...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAGGGTTCTGTTGGTCCTaGGACAGGCTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGGFCWS*DRLSIS
Trigger: GGAGATGCTGAGCCTGTCCCAGGACCAACAGAACCC...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCACGAGGGGTTCTGTTaGTCCTGGGACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIHEGFC*SWDRLS
Trigger: GCTGAGCCTGTCCCAGGACCAACAGAACCCCTCGTG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCGAGCTCCTTGGCCCCTaGAGTGAAACCTATGAGCCG +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAELLGP*SETYEP
Trigger: CGGCTCATAGGTTTCACTCCAGGGGCCAAGGAGCTC...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCACGTCGGCACTGCCATaGGACAGCATCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEATSALP*DSICSV
Trigger: CACAGAGCAGATGCTGTCCCATGGCAGTGCCGACGT...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCGCTGCGGCGGTTGTTTaGCTTGATGGGGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAAAAVV*LDGDGA
Trigger: AGCACCATCCCCATCAAGCCAAACAACCGCCGCAGC...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGGCGTGAGGGAGATGTaGCAGTTCCAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIGVREM*QFQPVS
Trigger: GGAGACAGGCTGGAACTGCCACATCTCCCTCACGCC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGCCATGGTGGTGCTGGTaGCATAGCCAAAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQPWWCW*HSQRSP
Trigger: GGGAGACCTTTGGCTATGCCACCAGCACCACCATGG...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGGGGCCATGGTGGTGCTaGTGGCATAGCCAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQGPWWC*WHSQRS
Trigger: AGACCTTTGGCTATGCCACCAGCACCACCATGGCCC...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATTCACCGACTGTACTGTaGACCTTTCATTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHSPTVL*TFHCPE
Trigger: CTCTGGACAATGAAAGGTTCACAGTACAGTCGGTGA...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGGCTCCACCTTCCCACTaGAGAAGAGCACGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKAPPSH*RRARSL
Trigger: CAGAGACCGTGCTCTTCTTCAGTGGGAAGGTGGAGC...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCGCTCCACCTTCCCACTaGAGAAGAGCACGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLAPPSH*RRARSL
Trigger: CAGAGACCGTGCTCTTCTTCAGTGGGAAGGTGGAGC...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAGAGGGAGGTCAGGTGTaGCTGCCAGTTGGAATCATC +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGEGGQV*LPVGII
Trigger: GATGATTCCAACTGGCAGTCACACCTGACCTCCCTC...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGGAGGGAGGTCAGGTGTaGCTGCCAGTTGGAATCATC +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQEGGQV*LPVGII
Trigger: GATGATTCCAACTGGCAGTCACACCTGACCTCCCTC...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCACTTTCTTTCTGTCTaGACCCGACAGAGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHHFLSV*TRQRVD
Trigger: ATCTACCCTCTGTCGGGTTCAGACAGAAAGAAAGTG...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCGCAGCTCGCACATGGTaGATATGCTGTTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLAARTW*ICCSGR
Trigger: CCGGCCAGAACAGCATATTCACCATGTGCGAGCTGC...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CTTCCTGCTGGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCGGCGGTTGTTTGGCTTaGTGGGGATGGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPAGGPSWSSLGSVTINLGGCLA*WGWCWA
Trigger: TGCCCAGCACCATCCCCATCAAGCCAAACAACCGCC...GAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCATGCCCATGAAGATCTaGCCGCTCAGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLMPMKI*PLRACM
Trigger: CATGCAGGCCCTGAGCGGTCAGATCTTCATGGGCAT...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGATGCCCATGAAGATCTaGCCGCTCAGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQMPMKI*PLRACM
Trigger: CATGCAGGCCCTGAGCGGTCAGATCTTCATGGGCAT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAATCATCTCGGGACACCTaGTTCAGGTCGTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLESSRDT*FRSSWR
Trigger: TCTCCATGACGACCTGAATCAGGTGTCCCGAGATGA...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGATCCAGGGCAATGCTaGCATCACTCTGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEDPGQC*HHSGGR
Trigger: TCTTCCTCCAGAGTGATGTCAGCATTGCCCTGGATC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAGCCCAGGAGCCATGTaGGCAGGGGCACATCTTCTA +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKSPGAM*AGAHLL
Trigger: TAGAAGATGTGCCCCTGCTCACATGGCTCCTGGGCT...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCAGCCCAGGAGCCATGTaGGCAGGGGCACATCTTCTA +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLSPGAM*AGAHLL
Trigger: TAGAAGATGTGCCCCTGCTCACATGGCTCCTGGGCT...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGAGCCCAGGAGCCATGTaGGCAGGGGCACATCTTCTA +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQSPGAM*AGAHLL
Trigger: TAGAAGATGTGCCCCTGCTCACATGGCTCCTGGGCT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAGGGACCAGGAAGGTaGAAAGGGCATATGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAQGPGR*KGHMEV
Trigger: GACCTCCATATGCCCTTTGCACCTTCCTGGTCCCTG...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCAGTCACTGCGCTCCTaGTCGTTGGAAAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLQSLRS*SLERCR
Trigger: CCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCGGCAAGCCAGTCACTaGGCTCCTGCTCGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIRQASH*APARWK
Trigger: TTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCGGCAAGCCAGTCACTaGGCTCCTGCTCGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLRQASH*APARWK
Trigger: TTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCCTGCAGGGCGATGTTaGACAGGTGGTCGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIPAGRC*TGGRKS
Trigger: GCTTTTCCGACCACCTGTGCAACATCGCCCTGCAGG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGCCAGGTGGTTCTCCTaGTTGAAGAGCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQARWFS*LKSSLA
Trigger: GGCCAAGGAGCTCTTCAAGCAGGAGAACCACCTGGC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCATCCCAGAAGTCTGTaGAGGCCTCCACGACCACGT +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIHPRSL*RPPRPR
Trigger: ACGTGGTCGTGGAGGCCTGCACAGACTTCTGGGATG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGAGCTGCCCTGATAGCTaGAGGGGAGAAAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQSCPDS*RGERPS
Trigger: GGATGGCCTTTCTCCCCTGCAGCTATCAGGGCAGCT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTAGGAGCGGTGGCAGCTaGACCAGACAAGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIRSGGS*TRQDRN
Trigger: GTTCCTGTCTTGTCTGGTGCAGCTGCCACCGCTCCT...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGTCCCTGAGAGCATCTTaGATTTGGTCGATGATCCCC +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILSLRAS*IWSMIP
Trigger: GGGGATCATCGACCAAATCCAAGATGCTCTCAGGGA...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGGTGCAAAGGGCATATaGAGGTCTGGATACATGGAG +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILGAKGI*RSGYME
Trigger: CTCCATGTATCCAGACCTCCATATGCCCTTTGCACC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCCGTTCACCTGGAGCTaGAGAAGGGTGTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLPFTWS*RRVYCQ
Trigger: CTGGCAGTACACCCTTCTCCAGCTCCAGGTGAACGG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGCCGTTCACCTGGAGCTaGAGAAGGGTGTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKPFTWS*RRVYCQ
Trigger: CTGGCAGTACACCCTTCTCCAGCTCCAGGTGAACGG...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGACTGTGGCTCAGAGTTaGCGATGTGCCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQTVAQS*RCALDH
Trigger: GTGATCCAGGGCACATCGCCAACTCTGAGCCACAGT...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGGCGATGTTGCACAGGTaGTCGGAAAAGCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKAMLHR*SEKRHR
Trigger: CCTGTGCCGCTTTTCCGACCACCTGTGCAACATCGC...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGAGCTCCTTGGCCCCTaGAGTGAAACCTATGAGCCG +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQELLGP*SETYEP
Trigger: CGGCTCATAGGTTTCACTCCAGGGGCCAAGGAGCTC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTACGTCGGCACTGCCATaGGACAGCATCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYITSALP*DSICSV
Trigger: CACAGAGCAGATGCTGTCCCATGGCAGTGCCGACGT...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAAGTCTTCCAGGAAGCTaGGGATATCGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGSLPGS*GYRCRW
Trigger: CCACCGACAGCGATATCCCCAGCTTCCTGGAAGACT...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGATGCTGACATCACTCTaGAGGAAGAGGCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILMLTSL*RKRQLL
Trigger: CAACAGCTGCCTCTTCCTCCAGAGTGATGTCAGCAT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCCATGGTGGTGCTGGTaGCATAGCCAAAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLPWWCW*HSQRSP
Trigger: GGGAGACCTTTGGCTATGCCACCAGCACCACCATGG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGGGGCCATGGTGGTGCTaGTGGCATAGCCAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKGPWWC*WHSQRS
Trigger: AGACCTTTGGCTATGCCACCAGCACCACCATGGCCC...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATAGTTCATGCCCAGCTTaGTCTCAAACTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHSSCPA*SQTAAS
Trigger: AGAAGCTGCAGTTTGAGACCAAGCTGGGCATGAACT...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAGGCCTCAGGGCTATaGTGTCTCCTTCTACCAACA +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAQASGL*CLLLPT
Trigger: TGTTGGTAGAAGGAGACATCATAGCCCTGAGGCCTG...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGTCACCGACTGTACTGTaGACCTTTCATTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILSPTVL*TFHCPE
Trigger: CTCTGGACAATGAAAGGTTCACAGTACAGTCGGTGA...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGAGGGAGGTCAGGTGTaGCTGCCAGTTGGAATCATC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIEGGQV*LPVGII
Trigger: GATGATTCCAACTGGCAGTCACACCTGACCTCCCTC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCCAATAGAGAGATGCTaGGCAGAGGGTAACAAAAGC +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASPIERC*AEGNKS
Trigger: GCTTTTGTTACCCTCTGCTCAGCATCTCTCTATTGG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGGCTGCAAAGCATGACTaGGGAGCAGTTGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQAAKHD*GAVGEV
Trigger: AACCTCACCAACTGCTCCTCAGTCATGCTTTGCAGC...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGCAGGGACCAGGAAGGTaGAAAGGGCATATGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKQGPGR*KGHMEV
Trigger: GACCTCCATATGCCCTTTGCACCTTCCTGGTCCCTG...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGCTGAGAGGACAGCGTaGAGTTCATGGGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQAERTA*SSWACR
Trigger: CCTACAAGCCCATGAACTGCACGCTGTCCTCTCAGC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGCTGAGAGGACAGCGTaGAGTTCATGGGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIAERTA*SSWACR
Trigger: CCTACAAGCCCATGAACTGCACGCTGTCCTCTCAGC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGCAGGCCCATCTTCTCTaGAAACACCTTGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQQAHLL*KHLAPE
Trigger: CTCAGGAGCAAGGTGTTTGCAGAGAAGATGGGCCTG...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGAGATAAAGACAGTGTaGAAAACAATCAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTEIKTV*KTIRAA
Trigger: AGCCGCCCTGATTGTTTTGCACACTGTCTTTATCTC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATGAGATAAAGACAGTGTaGAAAACAATCAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHEIKTV*KTIRAA
Trigger: AGCCGCCCTGATTGTTTTGCACACTGTCTTTATCTC...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGGTGCAAAGGGCATATaGAGGTCTGGATACATGGAG +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEGAKGI*RSGYME
Trigger: CTCCATGTATCCAGACCTCCATATGCCCTTTGCACC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGATACCAACAGGCTAACTaGCAGGTTCACCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGYQQAN*QVHQVS
Trigger: GGACACCTGGTGAACCTGCCAGTTAGCCTGTTGGTA...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCTACCAACAGGCTAACTaGCAGGTTCACCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAYQQAN*QVHQVS
Trigger: GGACACCTGGTGAACCTGCCAGTTAGCCTGTTGGTA...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGAAGCCTTGCTCATCTaGGCCAGGACACGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQEALLI*ARTRAS
Trigger: AGAAGCTCGTGTCCTGGCCCAGATGAGCAAGGCTTC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGACTGTGGCTCAGAGTTaGCGATGTGCCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQTVAQS*RCALDH
Trigger: GTGATCCAGGGCACATCGCCAACTCTGAGCCACAGT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGACTGTGGCTCAGAGTTaGCGATGTGCCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKTVAQS*RCALDH
Trigger: GTGATCCAGGGCACATCGCCAACTCTGAGCCACAGT...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTGCGCTCCTGCTCGTTaGAAAGGTGCAGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQCAPAR*KGAGYC
Trigger: ACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCA...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGATGCGCTCCTGCTCGTTaGAAAGGTGCAGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGCAPAR*KGAGYC
Trigger: ACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCA...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCTGCGCTCCTGCTCGTTaGAAAGGTGCAGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEACAPAR*KGAGYC
Trigger: ACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCA...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCAGTCTTCCAGGAAGCTaGGGATATCGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLSLPGS*GYRCRW
Trigger: CCACCGACAGCGATATCCCCAGCTTCCTGGAAGACT...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTAGGCCATCCGAGGCCTaGGCCATGGTGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIRPSEA*AMVVLV
Trigger: CACCAGCACCACCATGGCCCAGGCCTCGGATGGCCT...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTCTCTTTTCCATCCCTaGGAGCATCTTGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASSLFHP*EHLGFG
Trigger: ACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGA...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTTGTCCAGGCACCATCTaGTGTTGTCAATCACAGGCG +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYICPGTI*CCQSQA
Trigger: CGCCTGTGATTGACAACATCAGATGGTGCCTGGACA...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGTGTCCAGGCACCATCTaGTGTTGTCAATCACAGGCG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKCPGTI*CCQSQA
Trigger: CGCCTGTGATTGACAACATCAGATGGTGCCTGGACA...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCGATCCAGGGCAATGCTaGCATCACTCTGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLDPGQC*HHSGGR
Trigger: TCTTCCTCCAGAGTGATGTCAGCATTGCCCTGGATC...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGAGACAAGACAGGAACTaGATGACCACGAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQRQDRN*MTTRVS
Trigger: GCTGACCCTCGTGGTCATTCAGTTCCTGTCTTGTCT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGCTGCAAAGCATGACTaGGGAGCAGTTGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQAAKHD*GAVGEV
Trigger: AACCTCACCAACTGCTCCTCAGTCATGCTTTGCAGC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGATGCTCGTTGGAAAGGTaGAGGGTATTGTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGCSLER*RVLFRE
Trigger: CTCCCTGAACAATACCCTGCACCTTTCCAACGAGCA...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACAGACGGGTGTTTGCTaGGGCCATGTCCTTTATGAT +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGQTGVC*GHVLYD
Trigger: ATCATAAAGGACATGGCCGCAGCAAACACCCGTCTG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTAATCATCGAACTGTATaGACGAGGGGTTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASNHRTV*TRGSVG
Trigger: ACCAACAGAACCCCTCGTGCATACAGTTCGATGATT...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTGCGCTGTGGCTCTCCTaGAGGGCGATGTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIALWLS*RAMLHR
Trigger: CCTGTGCAACATCGCCCTGCAGGAGAGCCACAGCGC...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCAGGCCCATCTTCTCTaGAAACACCTTGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLQAHLL*KHLAPE
Trigger: CTCAGGAGCAAGGTGTTTGCAGAGAAGATGGGCCTG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTAAGGTTTTTGCCCGTTaGCATAGACATGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASKVFAR*HRHDGA
Trigger: AGCTCCATCATGTCTATGGCAACGGGCAAAAACCTT...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGGTTTTTGCCCGTTaGCATAGACATGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: RQALAGEDGTWAGGYSILKVFAR*HRHDGA
Trigger: AGCTCCATCATGTCTATGGCAACGGGCAAAAACCTT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGAGCTTGGTCTCAAACTaGAGCTTCTGGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQSLVSN*SFWRFW
Trigger: CCAGAAGCGCCAGAAGCTGCAGTTTGAGACCAAGCT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGATGTTTTACCAACAGGCTAACTaGCAGGTTCACCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SPGREPFLAVSWIHHRMFYQQAN*QVHQVS
Trigger: GGACACCTGGTGAACCTGCCAGTTAGCCTGTTGGTA...AAACATCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGAACATGCCGTTCACCTaGAGCTGGAGAAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQNMPFT*SWRRVY
Trigger: GTACACCCTTCTCCAGCTCCAGGTGAACGGCATGTT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAACATGCCGTTCACCTaGAGCTGGAGAAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKNMPFT*SWRRVY
Trigger: GTACACCCTTCTCCAGCTCCAGGTGAACGGCATGTT...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCTTCAGTGTAGCTGCTaGGAGTGTCCTCTGAGAACT +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYILQCSC*ECPLRT
Trigger: AGTTCTCAGAGGACACTCTCAGCAGCTACACTGAAG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAACATGGACAGGTCGTCTGTaGGGTCCTCGTGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSWSSLGSVTINLFPQLTWTGRL*GPRGCC
Trigger: ACAGCAGCCACGAGGACCTCACAGACGACCTGTCCA...TGTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTTGTCACCGTTGGGCGTaGGGGAGATGTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTICHRWA*GRCGSS
Trigger: GGAACTGCCACATCTCCCTCACGCCCAACGGTGACA...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCCAATAGAGAGATGCTaGGCAGAGGGTAACAAAAGC +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAPIERC*AEGNKS
Trigger: GCTTTTGTTACCCTCTGCTCAGCATCTCTCTATTGG...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CTGTGTTTGCATCTGTGCAGCAAACCTCCAAGTCCGGGGGTATCCCTTCACCCCTTCTTAGGAATGGACTaGAGGTTTTTGCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: LCLHLCSKPPSPGVSLHPFLGMD*RFLPVA
Trigger: GGCAACGGGCAAAAACCTTCAGTCCATTCCTAAGAA...GGGGTGAAGGGATACCCCCGGACTTGGAGGTTTGCTGCACAGATGCAAACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGATTCTTAGGAATGGACTaGAGGTTTTTGCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGFLGMD*RFLPVA
Trigger: GGCAACGGGCAAAAACCTTCAGTCCATTCCTAAGAA...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTTCTTAGGAATGGACTaGAGGTTTTTGCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQFLGMD*RFLPVA
Trigger: GGCAACGGGCAAAAACCTTCAGTCCATTCCTAAGAA...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCGAAGCTGCTTCTCCATaGCTCCTTCCATGTAAGACT +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAEAASP*LLPCKT
Trigger: AGTCTTACATGGAAGGAGGCATGGAGAAGCAGCTTC...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGTGCTCGTTGGAAAGGTaGAGGGTATTGTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKCSLER*RVLFRE
Trigger: CTCCCTGAACAATACCCTGCACCTTTCCAACGAGCA...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCAGACGGGTGTTTGCTaGGGCCATGTCCTTTATGAT +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIQTGVC*GHVLYD
Trigger: ATCATAAAGGACATGGCCGCAGCAAACACCCGTCTG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTTTCTGGCCGGGGACCTaGACCAGCTCGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIFWPGT*TSSMHL
Trigger: CAAGTGCATCGAGCTGGTGCAGGTCCCCGGCCAGAA...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTTCCCTGAGAGCATCTTaGATTTGGTCGATGATCCCC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYISLRAS*IWSMIP
Trigger: GGGGATCATCGACCAAATCCAAGATGCTCTCAGGGA...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTCACGAGGGGTTCTGTTaGTCCTGGGACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIHEGFC*SWDRLS
Trigger: GCTGAGCCTGTCCCAGGACCAACAGAACCCCTCGTG...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTATGTCCAGCCGGGCCTaGTACTGGGAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIMSSRA*YWEDTM
Trigger: CATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACAT...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGATGCTGACATCACTCTaGAGGAAGAGGCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKMLTSL*RKRQLL
Trigger: CAACAGCTGCCTCTTCCTCCAGAGTGATGTCAGCAT...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATAGGCCATCCGAGGCCTaGGCCATGGTGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHRPSEA*AMVVLV
Trigger: CACCAGCACCACCATGGCCCAGGCCTCGGATGGCCT...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTTCTTCTAGGCCAAAGTaGACACGTGAGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYISSRPK*TRESLC
Trigger: ACACAGGGACTCACGTGTCCACTTTGGCCTAGAAGA...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGTCTTCTAGGCCAAAGTaGACACGTGAGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKSSRPK*TRESLC
Trigger: ACACAGGGACTCACGTGTCCACTTTGGCCTAGAAGA...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
3UTR CAA 72 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTaGAACAGCAGTAGCCTCTGCTTTCCAACAGACACT +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSI*NSSSLCFPTDT
Trigger: AGTGTCTGTTGGAAAGCAGAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAACAAGGAGCAGCGGTTACTaGGGTGCAGGAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSWSSLGSVTINLFPQLTRSSGY*GAGSCF
Trigger: GAAGCAGCTTCCTGCACCTCAGTAACCGCTGCTCCT...TGTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGTCACCGACTGTACTGTaGACCTTTCATTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKSPTVL*TFHCPE
Trigger: CTCTGGACAATGAAAGGTTCACAGTACAGTCGGTGA...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTGCTGAGAGTGTCCTCTaGGAACTTGGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIAESVL*ELGQQG
Trigger: TCCCTGCTGGCCAAGTTCTCAGAGGACACTCTCAGC...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCACTTTCTTTCTGTCTaGACCCGACAGAGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLHFLSV*TRQRVD
Trigger: ATCTACCCTCTGTCGGGTTCAGACAGAAAGAAAGTG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCCAATAGAGAGATGCTaGGCAGAGGGTAACAAAAGC +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIPIERC*AEGNKS
Trigger: GCTTTTGTTACCCTCTGCTCAGCATCTCTCTATTGG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp AGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGATGTTTGAAGCTGCTTCTCCATaGCTCCTTCCATGTAAGACT +
Preference number: 4 (lower is better)
Translates to: SPGREPFLAVSWIHHRMFEAASP*LLPCKT
Trigger: AGTCTTACATGGAAGGAGGCATGGAGAAGCAGCTTC...AAACATCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTGGACGTGACCCCAGGTaGCTTGAACATGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIGRDPR*LEHEAQ
Trigger: CTGCGCTTCATGTTCAAGGCACCTGGGGTCACGTCC...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTCGGCAAGCCAGTCACTaGGCTCCTGCTCGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIRQASH*APARWK
Trigger: TTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCG...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTGCACGGTCTCTGGGCTaGGGTTTGGCCATGATAGGA +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIARSLG*GLAMIG
Trigger: TCCTATCATGGCCAAACCCCAGCCCAGAGACCGTGC...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTGGGTTCTGTTGGTCCTaGGACAGGCTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIGFCWS*DRLSIS
Trigger: GGAGATGCTGAGCCTGTCCCAGGACCAACAGAACCC...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTCCATGGTGGTGCTGGTaGCATAGCCAAAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTIPWWCW*HSQRSP
Trigger: GGGAGACCTTTGGCTATGCCACCAGCACCACCATGG...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCAGTTCATGCCCAGCTTaGTCTCAAACTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLSSCPA*SQTAAS
Trigger: AGAAGCTGCAGTTTGAGACCAAGCTGGGCATGAACT...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTAGTTCATGCCCAGCTTaGTCTCAAACTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYISSCPA*SQTAAS
Trigger: AGAAGCTGCAGTTTGAGACCAAGCTGGGCATGAACT...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAATTTTCTTCCGTTCTTTaGGGTGTTTCTCCAATACAG +
Preference number: 4 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEFSSVL*GVSPIQ
Trigger: CTGTATTGGAGAAACACCTCAAAGAACGGAAGAAAA...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGTCTCTTTTCCATCCCTaGGAGCATCTTGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKSLFHP*EHLGFG
Trigger: ACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGA...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTCTTCAGTGTCCCTGCTaGAACTCACGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTILQCPC*NSRWSQ
Trigger: CTGGCTCCAACGTGAGTTTCAGCAGGGACACTGAAG...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp TTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGGGAGGGCCTCCCCAATaGCGTCTCCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FPQLTSMKESFHMTGLCLGGPPQ*RLLQGL
Trigger: GAGACCCTGAAGGAGACGTCATTGGGGAGGCCCTCC...CAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTAATCATCGAACTGTATaGACGAGGGGTTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYINHRTV*TRGSVG
Trigger: ACCAACAGAACCCCTCGTGCATACAGTTCGATGATT...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGAATCATCGAACTGTATaGACGAGGGGTTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQNHRTV*TRGSVG
Trigger: ACCAACAGAACCCCTCGTGCATACAGTTCGATGATT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCACCTCCCCATACTCCTaGATGATCTTTATCATCTCA +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEATSPYS*MIFIIS
Trigger: TGAGATGATAAAGATCATGCAGGAGTATGGGGAGGT...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGACCTCCCCATACTCCTaGATGATCTTTATCATCTCA +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQTSPYS*MIFIIS
Trigger: TGAGATGATAAAGATCATGCAGGAGTATGGGGAGGT...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR GCA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGAGATAAAGACAGTGTaGAAAACAATCAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIEIKTV*KTIRAA
Trigger: AGCCGCCCTGATTGTTTTGCACACTGTCTTTATCTC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATTGGCCAGCAGGGAGCTaGGGGAAGCCTTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHWPAGS*GKPCSS
Trigger: AGATGAGCAAGGCTTCCCCCAGCTCCCTGCTGGCCA...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATCAGGCTGAGCCTTGCTaGGCTCTTCCTCTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHQAEPC*ALPLRL
Trigger: AAGGCGGAGAGGAAGAGCCCAGCAAGGCTCAGCCTG...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATATGTCCAGCCGGGCCTaGTACTGGGAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHMSSRA*YWEDTM
Trigger: CATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACAT...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTAGTCTTCCAGGAAGCTaGGGATATCGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTISLPGS*GYRCRW
Trigger: CCACCGACAGCGATATCCCCAGCTTCCTGGAAGACT...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCTTTTCTTCCGTTCTTTaGGGTGTTTCTCCAATACAG +
Preference number: 4 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAFSSVL*GVSPIQ
Trigger: CTGTATTGGAGAAACACCTCAAAGAACGGAAGAAAA...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTTTTCTTCCGTTCTTTaGGGTGTTTCTCCAATACAG +
Preference number: 4 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQFSSVL*GVSPIQ
Trigger: CTGTATTGGAGAAACACCTCAAAGAACGGAAGAAAA...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp CTTCCTGCTGGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTCTCTTTTCCATCCCTaGGAGCATCTTGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: LPAGGPSWSSLGSVTINLSLFHP*EHLGFG
Trigger: ACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGA...GAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp CCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAACAGATCCAGGGCAATGCTaGCATCACTCTGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSWSSLGSVTINLFPQLTDPGQC*HHSGGR
Trigger: TCTTCCTCCAGAGTGATGTCAGCATTGCCCTGGATC...TGTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATGCCAAAGTGGACACGTaGGTCCCTGTGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHAKVDT*VPVCPQ
Trigger: CTGTGGACACACAGGGACTCACGTGTCCACTTTGGC...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTAGCTTGGTCTCAAACTaGAGCTTCTGGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTISLVSN*SFWRFW
Trigger: CCAGAAGCGCCAGAAGCTGCAGTTTGAGACCAAGCT...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTAACATGCCGTTCACCTaGAGCTGGAGAAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTINMPFT*SWRRVY
Trigger: GTACACCCTTCTCCAGCTCCAGGTGAACGGCATGTT...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CCA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATAGAGCAGGGGGAGGATaGGCAACATGCCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHRAGGG*ATCRSP
Trigger: AGGTGAACGGCATGTTGCCCATCCTCCCCCTGCTCT...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTTGTGCTTGCCCTGGTTaGGTATCCATAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GYNPVAFREKEAQARKTICACPG*VSIALP
Trigger: AGGCAGAGCTATGGATACCCAACCAGGGCAAGCACA...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239299.2
CDS-3UTR TCA 90 bp TTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCAATCAGGGCGGCTGTaGGCTTCTGAGCGGATAGCA +
Preference number: 4 (lower is better)
Translates to: FPQLTSMKESFHMTGLCLQSGRL*ASERIA
Trigger: TGCTATCCGCTCAGAAGCTCACAGCCGCCCTGATTG...CAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp CCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAACATCTTCTAGGCCAAAGTaGACACGTGAGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PSWSSLGSVTINLFPQLTSSRPK*TRESLC
Trigger: ACACAGGGACTCACGTGTCCACTTTGGCCTAGAAGA...TGTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp TTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGGAAGCCTTGCTCATCTaGGCCAGGACACGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPQLTSMKESFHMTGLCLEALLI*ARTRAS
Trigger: AGAAGCTCGTGTCCTGGCCCAGATGAGCAAGGCTTC...CAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR TCA 90 bp TTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCAGGCCTCAGGGCTATaGTGTCTCCTTCTACCAACA +
Preference number: 4 (lower is better)
Translates to: FPQLTSMKESFHMTGLCLQASGL*CLLLPT
Trigger: TGTTGGTAGAAGGAGACATCATAGCCCTGAGGCCTG...CAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp TTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGAATACAGCCTCCAGCTaGTCCTTCAGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: FPQLTSMKESFHMTGLCLNTASS*SFRTLR
Trigger: CCTCAGTGTCCTGAAGGAGCAGCTGGAGGCTGTATT...CAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATTGCTCGTTGGAAAGGTaGAGGGTATTGTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHCSLER*RVLFRE
Trigger: CTCCCTGAACAATACCCTGCACCTTTCCAACGAGCA...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR GCA 90 bp TTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGAGCTTGGTCTCAAACTaGAGCTTCTGGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FPQLTSMKESFHMTGLCLSLVSN*SFWRFW
Trigger: CCAGAAGCGCCAGAAGCTGCAGTTTGAGACCAAGCT...CAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CCA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATATGCTGACATCACTCTaGAGGAAGAGGCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHMLTSL*RKRQLL
Trigger: CAACAGCTGCCTCTTCCTCCAGAGTGATGTCAGCAT...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS CCA 90 bp AGCTCGCAGAGGCCCCAGGGCACGTGCACGGGCAGCACAGCGCTGTaGCTCTCCTGCAGGGCGATGTTGCACAGGTGGTCGGAAAAGCGG +
Preference number: 5 (lower is better)
Translates to: SSQRPQGTCTGSTAL*LSCRAMLHRWSEKR
Trigger: CCGCTTTTCCGACCACCTGTGCAACATCGCCCTGCAGGAGAGCCACAGCGCTGTGCTGCCCGTGCACGTGCCCTGGGGCCTCTGCGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp ATCCCCCGGAGCCTGCGCTCCACCTCCCGGCGCTTCAGCCGGTCTTaGCGCCCGATGAGGACGAGGTTGAGGAGCAGCAACAGGAACAGA +
Preference number: 5 (lower is better)
Translates to: IPRSLRSTSRRFSRS*RPMRTRLRSSNRNR
Trigger: TCTGTTCCTGTTGCTGCTCCTCAACCTCGTCCTCATCGGGCGGCAAGACCGGCTGAAGCGCCGGGAGGTGGAGCGCAGGCTCCGGGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp CGGAAGGTCAGGGAGCAAGGCAGGCTGTTGAGCTGCCCTGATAGCTaGAGGGGAGAAAGGCCATCCGAGGCCTGGGCCATGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RKVREQGRLLSCPDS*RGERPSEAWAMVVL
Trigger: CAGCACCACCATGGCCCAGGCCTCGGATGGCCTTTCTCCCCTGCAGCTATCAGGGCAGCTCAACAGCCTGCCTTGCTCCCTGACCTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp AGCAGCAACAGGAACAGAGCAGAGGCGTTCACCAGCTCCACGCCCTaGCTCCCAGCTGGCTGGCCCCCACAGCAACACAACAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSNRNRAEAFTSSTP*LPAGWPPQQHNSSS
Trigger: GCTGCTGCTGTTGTGTTGCTGTGGGGGCCAGCCAGCTGGGAGCCAGGGCGTGGAGCTGGTGAACGCCTCTGCTCTGTTCCTGTTGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp GAGTGTCCTCTGAGAACTTGGCCAGCAGGGAGCTGGGGGAAGCCTTaGTCATCTGGGCCAGGACACGAGCTTCTCCACAGGCGGTCGCCA +
Preference number: 5 (lower is better)
Translates to: ECPLRTWPAGSWGKP*SSGPGHELLHRRSP
Trigger: TGGCGACCGCCTGTGGAGAAGCTCGTGTCCTGGCCCAGATGAGCAAGGCTTCCCCCAGCTCCCTGCTGGCCAAGTTCTCAGAGGACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS GCA 90 bp GGCTCAGAGGGCTTGGGGCCGTCGGCAAGCCAGTCACTGCGCTCCTaGTCGTTGGAAAGGTGCAGGGTATTGTTCAGGGAGCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GSEGLGPSASQSLRS*SLERCRVLFREPAR
Trigger: CCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCGACGGCCCCAAGCCCTCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp GAGGGTAGGGCTCAGAGGGCTTGGGGCCGTCGGCAAGCCAGTCACTaGGCTCCTGCTCGTTGGAAAGGTGCAGGGTATTGTTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: EGRAQRAWGRRQASH*APARWKGAGYCSGS
Trigger: GCTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCGACGGCCCCAAGCCCTCTGAGCCCTACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp GAGCAGTTGGTGAGGTTGCGGGCCCGGGCGCTGTCACAAAAGCTCTaGAGCGTGAAGCCGAAGCAGACGAGGCAGGAGCTGATGGTGAGG +
Preference number: 5 (lower is better)
Translates to: EQLVRLRARALSQKL*SVKPKQTRQELMVR
Trigger: CCTCACCATCAGCTCCTGCCTCGTCTGCTTCGGCTTCACGCTGCAGAGCTTTTGTGACAGCGCCCGGGCCCGCAACCTCACCAACTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp AACAGCAGCAGCACCGCCAGCAGCATCAGGGAGGCCCCGGGCCAGTaGAAACAGGAGCAGCGGTTACTGAGGTGCAGGAAGCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: NSSSTASSIREAPGQ*KQEQRLLRCRKLLL
Trigger: GAGAAGCAGCTTCCTGCACCTCAGTAACCGCTGCTCCTGTTTCCACTGGCCCGGGGCCTCCCTGATGCTGCTGGCGGTGCTGCTGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000136720.8
ENSMUST00000141871.8
ENSMUST00000239299.2
CDS CCA 90 bp GGCAGCACAGCGCTGTGGCTCTCCTGCAGGGCGATGTTGCACAGGTaGTCGGAAAAGCGGCACAGGCGCTCAGTGACACTGGCGTTACAC +
Preference number: 5 (lower is better)
Translates to: GSTALWLSCRAMLHR*SEKRHRRSVTLALH
Trigger: GTGTAACGCCAGTGTCACTGAGCGCCTGTGCCGCTTTTCCGACCACCTGTGCAACATCGCCCTGCAGGAGAGCCACAGCGCTGTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATGCACGAGGGGTTCTGTaGGTCCTGGGACAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHARGVL*VLGQAQ
Trigger: CTGAGCCTGTCCCAGGACCAACAGAACCCCTCGTGC...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGGCAGCTTGGCCCGGTaGCAGTCTTCCAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTGSLAR*QSSRKL
Trigger: CAGCTTCCTGGAAGACTGCAACCGGGCCAAGCTGCC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAAGGAAGAGGCAGCTGTaGCGCAGGTTGGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTRKRQL*RRLAEL
Trigger: GAGCTCGGCCAACCTGCGCAACAGCTGCCTCTTCCT...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAATGACTGAGGAGCAGTaGGTGAGGTTGCGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTMTEEQ*VRLRAR
Trigger: CCGGGCCCGCAACCTCACCAACTGCTCCTCAGTCAT...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp AGGGCTTGGGGCCGTCGGCAAGCCAGTCACTGCGCTCCTGCTCGTTaGAAAGGTGCAGGGTATTGTTCAGGGAGCCAGCAAGGAGGGCAT +
Preference number: 5 (lower is better)
Translates to: RAWGRRQASHCAPAR*KGAGYCSGSQQGGH
Trigger: ATGCCCTCCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCGACGGCCCCAAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGAGCTGGGGGAAGCCTaGCTCATCTGGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: RQALAGEDGTWAGGYSILELGEA*LIWART
Trigger: TGTCCTGGCCCAGATGAGCAAGGCTTCCCCCAGCTC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGAGCACGAGGGGTTCTGTaGGTCCTGGGACAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: AAALGGSLSWLFHGSTTGARGVL*VLGQAQ
Trigger: CTGAGCCTGTCCCAGGACCAACAGAACCCCTCGTGC...TCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGCACGAGGGGTTCTGTaGGTCCTGGGACAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASARGVL*VLGQAQ
Trigger: CTGAGCCTGTCCCAGGACCAACAGAACCCCTCGTGC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAGGTTCAGCAGCACGTaGAGGCCCAGCGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: RQALAGEDGTWAGGYSILRFSST*RPSGLR
Trigger: CCTCAAGCCGCTGGGCCTCAACGTGCTGCTGAACCT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTAGGTTCAGCAGCACGTaGAGGCCCAGCGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASRFSST*RPSGLR
Trigger: CCTCAAGCCGCTGGGCCTCAACGTGCTGCTGAACCT...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATAAGCGGATGCAGGCGTaGACCAGCCCATCGATGAGG +
Preference number: 5 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHKRMQA*TSPSMR
Trigger: CCTCATCGATGGGCTGGTCAACGCCTGCATCCGCTT...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATGAGCAAGGCAGGCTGTaGAGCTGCCCTGATAGCTGC +
Preference number: 5 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHEQGRL*SCPDSC
Trigger: GCAGCTATCAGGGCAGCTCAACAGCCTGCCTTGCTC...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCCCGCGCTGCTGTGCTaGCCCTGGTTGGGTATCCAT +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASPALLC*PWLGIH
Trigger: ATGGATACCCAACCAGGGCAAGCACAGCAGCGCGGG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239299.2
CDS GCA 90 bp GGGCCGTCGGCAAGCCAGTCACTGCGCTCCTGCTCGTTGGAAAGGTaGAGGGTATTGTTCAGGGAGCCAGCAAGGAGGGCATCGTGTTCA +
Preference number: 5 (lower is better)
Translates to: GPSASQSLRSCSLER*RVLFREPARRASCS
Trigger: TGAACACGATGCCCTCCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCGACGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp CTGAACCCGACAGAGGGTAGATGTCAGCGCCATCCCAGAAGTCTGTaGAGGCCTCCACGACCACGTCGGCACTGCCATGGGACAGCATCT +
Preference number: 5 (lower is better)
Translates to: LNPTEGRCQRHPRSL*RPPRPRRHCHGTAS
Trigger: AGATGCTGTCCCATGGCAGTGCCGACGTGGTCGTGGAGGCCTGCACAGACTTCTGGGATGGCGCTGACATCTACCCTCTGTCGGGTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp TGCTGCGGCCATGTCCTTTATGATGAGGGTAGGGCTCAGAGGGCTTaGGGCCGTCGGCAAGCCAGTCACTGCGCTCCTGCTCGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: CCGHVLYDEGRAQRA*GRRQASHCAPARWK
Trigger: TTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCGACGGCCCCAAGCCCTCTGAGCCCTACCCTCATCATAAAGGACATGGCCGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGTGACCCCAGGTGCCTaGAACATGAAGCGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASVTPGA*NMKRRA
Trigger: TGCCCTGCGCTTCATGTTCAAGGCACCTGGGGTCAC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCACTGTGGCTCAGAGTaGGCGATGTGCCCTGGATCA +
Preference number: 5 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHHCGSE*AMCPGS
Trigger: TGATCCAGGGCACATCGCCAACTCTGAGCCACAGTG...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCAGCTGCTGCGGCGGTaGTTTGGCTTGATGGGGATG +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASQLLRR*FGLMGM
Trigger: CATCCCCATCAAGCCAAACAACCGCCGCAGCAGCTG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGCGGATGCAGGCGTaGACCAGCCCATCGATGAGG +
Preference number: 5 (lower is better)
Translates to: RQALAGEDGTWAGGYSILKRMQA*TSPSMR
Trigger: CCTCATCGATGGGCTGGTCAACGCCTGCATCCGCTT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGGCAGCTTGGCCCGGTaGCAGTCTTCCAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEGSLAR*QSSRKL
Trigger: CAGCTTCCTGGAAGACTGCAACCGGGCCAAGCTGCC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAATGACTGAGGAGCAGTaGGTGAGGTTGCGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEMTEEQ*VRLRAR
Trigger: CCGGGCCCGCAACCTCACCAACTGCTCCTCAGTCAT...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 90 bp TGCTGTTCTGGCCGGGGACCTGCACCAGCTCGATGCACTTGCCGTTaGGCTGAGAGGACAGCGTGCAGTTCATGGGCTTGTAGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: CCSGRGPAPARCTCR*AERTACSSWACRQR
Trigger: CCTTTGCCTACAAGCCCATGAACTGCACGCTGTCCTCTCAGCTCAACGGCAAGTGCATCGAGCTGGTGCAGGTCCCCGGCCAGAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 90 bp GCACGATGTCCAGCCGGGCCTGGTACTGGGAGGACACCATGCCCATaGAGATCTGACCGCTCAGGGCCTGCATGCAGTCTTCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: ARCPAGPGTGRTPCP*RSDRSGPACSLLSP
Trigger: TGGAGAAAGAAGACTGCATGCAGGCCCTGAGCGGTCAGATCTTCATGGGCATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACATCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp AGGATGGGCAACATGCCGTTCACCTGGAGCTGGAGAAGGGTGTACTaGCAGGACGTGACCCCAGGTGCCTTGAACATGAAGCGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RMGNMPFTWSWRRVY*QDVTPGALNMKRRA
Trigger: TGCCCTGCGCTTCATGTTCAAGGCACCTGGGGTCACGTCCTGGCAGTACACCCTTCTCCAGCTCCAGGTGAACGGCATGTTGCCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CCA 90 bp CTCCCCGATCCCTTCATCGGAGCTCCAGCTGCTGCGGCGGTTGTTTaGCTTGATGGGGATGGTGCTGGGCAGCTCGCACATGGTGAATAT +
Preference number: 5 (lower is better)
Translates to: LPDPFIGAPAAAAVV*LDGDGAGQLAHGEY
Trigger: ATATTCACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCCAAACAACCGCCGCAGCAGCTGGAGCTCCGATGAAGGGATCGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp GGGATCTCAGAGCCAGGCATGTCACCGTTGGGCGTGAGGGAGATGTaGCAGTTCCAGCCTGTCTCCAGGCCCATCTTCTCTGCAAACACC +
Preference number: 5 (lower is better)
Translates to: GISEPGMSPLGVREM*QFQPVSRPIFSANT
Trigger: GGTGTTTGCAGAGAAGATGGGCCTGGAGACAGGCTGGAACTGCCACATCTCCCTCACGCCCAACGGTGACATGCCTGGCTCTGAGATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGTCGGAAGAGCCGGTGTaGCTGGGGGTTCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQSEEPV*LGVLWP
Trigger: GGGCCACAGAACCCCCAGCAACACCGGCTCTTCCGA...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGTGACCCCAGGTGCCTaGAACATGAAGCGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEVTPGA*NMKRRA
Trigger: TGCCCTGCGCTTCATGTTCAAGGCACCTGGGGTCAC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAGTGTCCTCTGAGAACTaGGCCAGCAGGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGVSSEN*ASRELG
Trigger: CCCCAGCTCCCTGCTGGCCAAGTTCTCAGAGGACAC...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGAAAGGTGCAGGGTATaGTTCAGGGAGCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTERCRV*FREPAR
Trigger: CCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGAGCCAGACGGGTGTTaGCTGCGGCCATGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASEPDGC*LRPCPL
Trigger: TAAAGGACATGGCCGCAGCAAACACCCGTCTGGCTC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTCCTGCAGGGCGATGTaGCACAGGTGGTCGGAAAAG +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASSCRAM*HRWSEK
Trigger: CTTTTCCGACCACCTGTGCAACATCGCCCTGCAGGA...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACGGCGGTTGTTTGGCTaGATGGGGATGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGRRLFG*MGMVLG
Trigger: GCCCAGCACCATCCCCATCAAGCCAAACAACCGCCG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAGGCAGCTTGGCCCGGTaGCAGTCTTCCAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGGSLAR*QSSRKL
Trigger: CAGCTTCCTGGAAGACTGCAACCGGGCCAAGCTGCC...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAATGACTGAGGAGCAGTaGGTGAGGTTGCGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGMTEEQ*VRLRAR
Trigger: CCGGGCCCGCAACCTCACCAACTGCTCCTCAGTCAT...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGATCCACCACAGGACGGCCCACCAGAGGTTaGTCAAAGGGCTCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: AAALGGSLSWLFHGSTTGRPTRG*SKGSFS
Trigger: GGAGAAAGAGCCCTTTGACAAACCTCTGGTGGGCCG...TCCTGTGGTGGATCCATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTCGGCCCACCAGAGGTTaGTCAAAGGGCTCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASRPTRG*SKGSFS
Trigger: GGAGAAAGAGCCCTTTGACAAACCTCTGGTGGGCCG...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp CACCTGGAGCTGGAGAAGGGTGTACTGCCAGGACGTGACCCCAGGTaGCTTGAACATGAAGCGCAGGGCATTGGTGATGAGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: HLELEKGVLPGRDPR*LEHEAQGIGDEKAS
Trigger: GCTGGCTTTCTCATCACCAATGCCCTGCGCTTCATGTTCAAGGCACCTGGGGTCACGTCCTGGCAGTACACCCTTCTCCAGCTCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp CCAAGCTGTGCAGCAGACTGGCACTGTGGCTCAGAGTTGGCGATGTaGCCTGGATCACCCTCAGAAAGTGACCCCAAATGCAGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: PSCAADWHCGSELAM*PGSPSESDPKCSAA
Trigger: TGCTGCGCTGCATTTGGGGTCACTTTCTGAGGGTGATCCAGGGCACATCGCCAACTCTGAGCCACAGTGCCAGTCTGCTGCACAGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CCA 90 bp TTCGGCCACTTGATCTCTTTTCCATCCCTGAGAGCATCTTGGATTTaGTCGATGATCCCCCGGAGCCTGCGCTCCACCTCCCGGCGCTTC +
Preference number: 5 (lower is better)
Translates to: FGHLISFPSLRASWI*SMIPRSLRSTSRRF
Trigger: GAAGCGCCGGGAGGTGGAGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGATCAAGTGGCCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp TCCCAGAAGTCTGTGCAGGCCTCCACGACCACGTCGGCACTGCCATaGGACAGCATCTGCTCTGTGCTGGTGGCAGTGTCTTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: SQKSVQASTTTSALP*DSICSVLVAVSLMK
Trigger: CTTCATCAAAGACACTGCCACCAGCACAGAGCAGATGCTGTCCCATGGCAGTGCCGACGTGGTCGTGGAGGCCTGCACAGACTTCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACCGATGAGGACGAGGTaGAGGAGCAGCAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEPMRTR*RSSNRN
Trigger: GTTCCTGTTGCTGCTCCTCAACCTCGTCCTCATCGG...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATAGGCACCATCTGATGTaGTCAATCACAGGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHRHHLM*SITGVS
Trigger: GGAGACGCCTGTGATTGACAACATCAGATGGTGCCT...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTATGAAGCGCAGGGCATaGGTGATGAGAAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASMKRRA*VMRKPA
Trigger: GGCTGGCTTTCTCATCACCAATGCCCTGCGCTTCAT...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGATGAAGCGCAGGGCATaGGTGATGAGAAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: RQALAGEDGTWAGGYSILMKRRA*VMRKPA
Trigger: GGCTGGCTTTCTCATCACCAATGCCCTGCGCTTCAT...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGGAGCTGGGGGAAGCCTaGCTCATCTGGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKELGEA*LIWART
Trigger: TGTCCTGGCCCAGATGAGCAAGGCTTCCCCCAGCTC...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGAGCTGGGGGAAGCCTaGCTCATCTGGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQELGEA*LIWART
Trigger: TGTCCTGGCCCAGATGAGCAAGGCTTCCCCCAGCTC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGTGTCCTCTGAGAACTaGGCCAGCAGGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIVSSEN*ASRELG
Trigger: CCCCAGCTCCCTGCTGGCCAAGTTCTCAGAGGACAC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGGTGTCCTCTGAGAACTaGGCCAGCAGGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKVSSEN*ASRELG
Trigger: CCCCAGCTCCCTGCTGGCCAAGTTCTCAGAGGACAC...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACACTGTGGCTCAGAGTaGGCGATGTGCCCTGGATCA +
Preference number: 5 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEHCGSE*AMCPGS
Trigger: TGATCCAGGGCACATCGCCAACTCTGAGCCACAGTG...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGAAAGGTGCAGGGTATaGTTCAGGGAGCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASERCRV*FREPAR
Trigger: CCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGAGGTTCAGCAGCACGTaGAGGCCCAGCGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQRFSST*RPSGLR
Trigger: CCTCAAGCCGCTGGGCCTCAACGTGCTGCTGAACCT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGTGCTTGAAGAGCTCCTaGGCCCCTGGAGTGAAACCT +
Preference number: 5 (lower is better)
Translates to: RQALAGEDGTWAGGYSILCLKSS*APGVKP
Trigger: AGGTTTCACTCCAGGGGCCAAGGAGCTCTTCAAGCA...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGCTTGAAGAGCTCCTaGGCCCCTGGAGTGAAACCT +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASCLKSS*APGVKP
Trigger: AGGTTTCACTCCAGGGGCCAAGGAGCTCTTCAAGCA...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGAGGAAGAGGCAGCTGTaGCGCAGGTTGGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQRKRQL*RRLAEL
Trigger: GAGCTCGGCCAACCTGCGCAACAGCTGCCTCTTCCT...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGCCACATGGGCCTGGGCAGGGTCCTCTGTGGATGACTTGTGGTCAGCTGACAGCTGATGCTTTCTTCTaGTCGGAAGGTCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GPHGPGQGPLWMTCGQLTADAFF*SEGQGA
Trigger: TGCTCCCTGACCTTCCGACAAGAAGAAAGCATCAGC...TGTCAGCTGACCACAAGTCATCCACAGAGGACCCTGCCCAGGCCCATGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 90 bp GTTCAGCAGCACGTTGAGGCCCAGCGGCTTGAGGGAGGTCAGGTGTaGCTGCCAGTTGGAATCATCGAACTGTATGCACGAGGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: VQQHVEAQRLEGGQV*LPVGIIELYARGVL
Trigger: CAGAACCCCTCGTGCATACAGTTCGATGATTCCAACTGGCAGTCACACCTGACCTCCCTCAAGCCGCTGGGCCTCAACGTGCTGCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS GCA 90 bp GAGTTGGCGATGTGCCCTGGATCACCCTCAGAAAGTGACCCCAAATaGAGCGCAGCATCTCCTGAGAGGAGACGGCTTCAGTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: ELAMCPGSPSESDPK*SAASPERRRLQCSC
Trigger: GCAGCTACACTGAAGCCGTCTCCTCTCAGGAGATGCTGCGCTGCATTTGGGGTCACTTTCTGAGGGTGATCCAGGGCACATCGCCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS GCA 90 bp AGCAGCACGTTGAGGCCCAGCGGCTTGAGGGAGGTCAGGTGTGACTaGCAGTTGGAATCATCGAACTGTATGCACGAGGGGTTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SSTLRPSGLREVRCD*QLESSNCMHEGFCW
Trigger: CCAACAGAACCCCTCGTGCATACAGTTCGATGATTCCAACTGGCAGTCACACCTGACCTCCCTCAAGCCGCTGGGCCTCAACGTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CCA 90 bp ATGGAGTTCGGCCACTTGATCTCTTTTCCATCCCTGAGAGCATCTTaGATTTGGTCGATGATCCCCCGGAGCCTGCGCTCCACCTCCCGG +
Preference number: 5 (lower is better)
Translates to: MEFGHLISFPSLRAS*IWSMIPRSLRSTSR
Trigger: CCGGGAGGTGGAGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGATCAAGTGGCCGAACTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp AACGGAGCCCAAGCTGTGCAGCAGACTGGCACTGTGGCTCAGAGTTaGCGATGTGCCCTGGATCACCCTCAGAAAGTGACCCCAAATGCA +
Preference number: 5 (lower is better)
Translates to: NGAQAVQQTGTVAQS*RCALDHPQKVTPNA
Trigger: TGCATTTGGGGTCACTTTCTGAGGGTGATCCAGGGCACATCGCCAACTCTGAGCCACAGTGCCAGTCTGCTGCACAGCTTGGGCTCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGCCGATGAGGACGAGGTaGAGGAGCAGCAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQPMRTR*RSSNRN
Trigger: GTTCCTGTTGCTGCTCCTCAACCTCGTCCTCATCGG...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGACCGATGAGGACGAGGTaGAGGAGCAGCAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGPMRTR*RSSNRN
Trigger: GTTCCTGTTGCTGCTCCTCAACCTCGTCCTCATCGG...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCGTGACCCCAGGTGCCTaGAACATGAAGCGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLVTPGA*NMKRRA
Trigger: TGCCCTGCGCTTCATGTTCAAGGCACCTGGGGTCAC...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGCTGCGCTCCTGCTCGTaGGAAAGGTGCAGGGTATTG +
Preference number: 5 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQLRSCS*ERCRVL
Trigger: CAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAG...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAGAGCCAGACGGGTGTTaGCTGCGGCCATGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGEPDGC*LRPCPL
Trigger: TAAAGGACATGGCCGCAGCAAACACCCGTCTGGCTC...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCAGGTGGTTCTCCTGCTaGAAGAGCTCCTTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: PKQAGRGYNPVAFREKEARWFSC*KSSLAP
Trigger: AGGGGCCAAGGAGCTCTTCAAGCAGGAGAACCACCT...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGCAGCTGCTGCGGCGGTaGTTTGGCTTGATGGGGATG +
Preference number: 5 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKQLLRR*FGLMGM
Trigger: CATCCCCATCAAGCCAAACAACCGCCGCAGCAGCTG...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCAAGCGGATGCAGGCGTaGACCAGCCCATCGATGAGG +
Preference number: 5 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLKRMQA*TSPSMR
Trigger: CCTCATCGATGGGCTGGTCAACGCCTGCATCCGCTT...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATTTCTCTGCAAACACCTaGCTCCTGAGCTCATCTTCC +
Preference number: 5 (lower is better)
Translates to: PQAGPCRGRWDMGRRIQHFSANT*LLSSSS
Trigger: GGAAGATGAGCTCAGGAGCAAGGTGTTTGCAGAGAA...ATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGGAGCAAGGCAGGCTGTaGAGCTGCCCTGATAGCTGC +
Preference number: 5 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQEQGRL*SCPDSC
Trigger: GCAGCTATCAGGGCAGCTCAACAGCCTGCCTTGCTC...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGGCGCTCTGTCATCATaGCTGCAAAGCATGACTGAG +
Preference number: 5 (lower is better)
Translates to: RQALAGEDGTWAGGYSILGALSS*LQSMTE
Trigger: CTCAGTCATGCTTTGCAGCAATGATGACAGAGCGCC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GTAGAGTGCCGAGAGCTGCAGCCCTGGGAGGGAGCCTTTCCTGGCTGTTTCATGGAGTTCATGCCCAGCTaGGTCTCAAACTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: VECRELQPWEGAFPGCFMEFMPS*VSNCSF
Trigger: GAAGCTGCAGTTTGAGACCAAGCTGGGCATGAACTC...CATGAAACAGCCAGGAAAGGCTCCCTCCCAGGGCTGCAGCTCTCGGCACTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTGAGTTCATGCCCAGCTaGGTCTCAAACTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASEFMPS*VSNCSF
Trigger: GAAGCTGCAGTTTGAGACCAAGCTGGGCATGAACTC...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 90 bp TACTCAGGAGCGGTGGCAGCTGCACCAGACAAGACAGGAACTGAATaGCCACGAGGGTCAGCTGGCACTGCAACAGGAAGAGGAAGCACT +
Preference number: 5 (lower is better)
Translates to: YSGAVAAAPDKTGTE*PRGSAGTATGRGST
Trigger: AGTGCTTCCTCTTCCTGTTGCAGTGCCAGCTGACCCTCGTGGTCATTCAGTTCCTGTCTTGTCTGGTGCAGCTGCCACCGCTCCTGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp GCCAGGCCTCAGGGCTATGATGTCTCCTTCTACCAACAGGCTAACTaGCAGGTTCACCAGGTGTCCATCTCTGTAAGCCCAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: ARPQGYDVSFYQQAN*QVHQVSISVSPVQG
Trigger: TCCCTGCACTGGGCTTACAGAGATGGACACCTGGTGAACCTGCCAGTTAGCCTGTTGGTAGAAGGAGACATCATAGCCCTGAGGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp ATGTGCTCATCGTCCTTGATGCCCCTCAGGGAGGCAAAGGACTCCTaGCCAGGCCTCAGGGCTATGATGTCTCCTTCTACCAACAGGCTA +
Preference number: 5 (lower is better)
Translates to: MCSSSLMPLREAKDS*PGLRAMMSPSTNRL
Trigger: TAGCCTGTTGGTAGAAGGAGACATCATAGCCCTGAGGCCTGGCCAGGAGTCCTTTGCCTCCCTGAGGGGCATCAAGGACGATGAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGCACTGTGGCTCAGAGTaGGCGATGTGCCCTGGATCA +
Preference number: 5 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQHCGSE*AMCPGS
Trigger: TGATCCAGGGCACATCGCCAACTCTGAGCCACAGTG...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGGATAGGATCCCCTGTTaGTCTACACAGCACAGTACC +
Preference number: 5 (lower is better)
Translates to: RQALAGEDGTWAGGYSILDRIPC*STQHST
Trigger: GGTACTGTGCTGTGTAGACAAACAGGGGATCCTATC...CAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCGAAAGGTGCAGGGTATaGTTCAGGGAGCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: PKQAGRGYNPVAFREKEAERCRV*FREPAR
Trigger: CCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTC...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCTGCGCTCCTGCTCGTaGGAAAGGTGCAGGGTATTG +
Preference number: 5 (lower is better)
Translates to: THGGGAEDPFTKGLRSYILRSCS*ERCRVL
Trigger: CAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCGAGCCAGACGGGTGTTaGCTGCGGCCATGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLEPDGC*LRPCPL
Trigger: TAAAGGACATGGCCGCAGCAAACACCCGTCTGGCTC...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGTCCTGCAGGGCGATGTaGCACAGGTGGTCGGAAAAG +
Preference number: 5 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKSCRAM*HRWSEK
Trigger: CTTTTCCGACCACCTGTGCAACATCGCCCTGCAGGA...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAGGTGGTTCTCCTGCTaGAAGAGCTCCTTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKRWFSC*KSSLAP
Trigger: AGGGGCCAAGGAGCTCTTCAAGCAGGAGAACCACCT...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAAGCTGATGCTTTCTTCTaGTCGGAAGGTCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEADAFF*SEGQGA
Trigger: TGCTCCCTGACCTTCCGACAAGAAGAAAGCATCAGC...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGCGGCCCACCAGAGGTTaGTCAAAGGGCTCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQRPTRG*SKGSFS
Trigger: GGAGAAAGAGCCCTTTGACAAACCTCTGGTGGGCCG...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCCTGTGCTTGCCCTGGTaGGGTATCCATAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLLCLPW*GIHSSA
Trigger: GGCAGAGCTATGGATACCCAACCAGGGCAAGCACAG...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239299.2
CDS GCA 90 bp CTTTTCTTCCGTTCTTTGAGGTGTTTCTCCAATACAGCCTCCAGCTaGTCCTTCAGGACACTGAGGGCCTTCCGGGTAGACAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LFFRSLRCFSNTASS*SFRTLRAFRVDRPR
Trigger: CCTGGGCCTGTCTACCCGGAAGGCCCTCAGTGTCCTGAAGGAGCAGCTGGAGGCTGTATTGGAGAAACACCTCAAAGAACGGAAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000103034.10
ENSMUST00000136720.8
ENSMUST00000141871.8
ENSMUST00000239299.2
CDS GCA 90 bp CACCAGGTGTCCATCTCTGTAAGCCCAGTGCAGGGACCAGGAAGGTaGAAAGGGCATATGGAGGTCTGGATACATGGAGTTCGGCCACTT +
Preference number: 5 (lower is better)
Translates to: HQVSISVSPVQGPGR*KGHMEVWIHGVRPL
Trigger: AAGTGGCCGAACTCCATGTATCCAGACCTCCATATGCCCTTTGCACCTTCCTGGTCCCTGCACTGGGCTTACAGAGATGGACACCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTTCGGAAGAGCCGGTGTaGCTGGGGGTTCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GYNPVAFREKEAQARKTISEEPV*LGVLWP
Trigger: GGGCCACAGAACCCCCAGCAACACCGGCTCTTCCGA...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACAGGCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTAGGTGTGACTGCCAGTaGGAATCATCGAACTGTATG +
Preference number: 5 (lower is better)
Translates to: TGRPLPGKMGHGQEDTASRCDCQ*ESSNCM
Trigger: CATACAGTTCGATGATTCCAACTGGCAGTCACACCT...AGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CTTCCTGCTGGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTCCTGCAGGGCGATGTaGCACAGGTGGTCGGAAAAG +
Preference number: 5 (lower is better)
Translates to: LPAGGPSWSSLGSVTINLSCRAM*HRWSEK
Trigger: CTTTTCCGACCACCTGTGCAACATCGCCCTGCAGGA...GAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACTGGTGGCAGTGTCTTaGATGAAGAGGCTGATCATG +
Preference number: 5 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLELVAVS*MKRLIM
Trigger: CATGATCAGCCTCTTCATCAAAGACACTGCCACCAG...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GCAGGCCCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAATTCTCTGCAAACACCTaGCTCCTGAGCTCATCTTCC +
Preference number: 5 (lower is better)
Translates to: AGPCRGRWDMGRRIQHLEFSANT*LLSSSS
Trigger: GGAAGATGAGCTCAGGAGCAAGGTGTTTGCAGAGAA...TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCTTGCCGGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGGCTGATGCTTTCTTCTaGTCGGAAGGTCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: PCRGRWDMGRRIQHLEQQADAFF*SEGQGA
Trigger: TGCTCCCTGACCTTCCGACAAGAAGAAAGCATCAGC...CTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 90 bp AGCCCAGTGCAGGGACCAGGAAGGTGCAAAGGGCATATGGAGGTCTaGATACATGGAGTTCGGCCACTTGATCTCTTTTCCATCCCTGAG +
Preference number: 5 (lower is better)
Translates to: SPVQGPGRCKGHMEV*IHGVRPLDLFSIPE
Trigger: CTCAGGGATGGAAAAGAGATCAAGTGGCCGAACTCCATGTATCCAGACCTCCATATGCCCTTTGCACCTTCCTGGTCCCTGCACTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAGGCACCATCTGATGTaGTCAATCACAGGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKRHHLM*SITGVS
Trigger: GGAGACGCCTGTGATTGACAACATCAGATGGTGCCT...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CTTCCTGCTGGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCATGAAGCGCAGGGCATaGGTGATGAGAAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LPAGGPSWSSLGSVTINLMKRRA*VMRKPA
Trigger: GGCTGGCTTTCTCATCACCAATGCCCTGCGCTTCAT...GAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAGATAGGATCCCCTGTTaGTCTACACAGCACAGTACC +
Preference number: 5 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGDRIPC*STQHST
Trigger: GGTACTGTGCTGTGTAGACAAACAGGGGATCCTATC...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTCGGCGGTTGTTTGGCTaGATGGGGATGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GYNPVAFREKEAQARKTIRRLFG*MGMVLG
Trigger: GCCCAGCACCATCCCCATCAAGCCAAACAACCGCCG...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCGAGTTCATGCCCAGCTaGGTCTCAAACTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLEFMPS*VSNCSF
Trigger: GAAGCTGCAGTTTGAGACCAAGCTGGGCATGAACTC...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 90 bp GAGATAAAGACAGTGTGCAAAACAATCAGGGCGGCTGTGAGCTTCTaGGCGGATAGCAACCCATTGGCAAAATCCTCGAACCAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: EIKTVCKTIRAAVSF*ADSNPLAKSSNQAG
Trigger: GCCGGCCTGGTTCGAGGATTTTGCCAATGGGTTGCTATCCGCTCAGAAGCTCACAGCCGCCCTGATTGTTTTGCACACTGTCTTTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GGGGAAGATGGGACATGGGCAGGAGGATACAGCATCTTGAACAGCAGTAGCCTCATGGAGTTCGGCCACTaGATCTCTTTTCCATCCCTG +
Preference number: 5 (lower is better)
Translates to: GEDGTWAGGYSILNSSSLMEFGH*ISFPSL
Trigger: CAGGGATGGAAAAGAGATCAAGTGGCCGAACTCCAT...GAGGCTACTGCTGTTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTGATAGGATCCCCTGTTaGTCTACACAGCACAGTACC +
Preference number: 5 (lower is better)
Translates to: THGGGAEDPFTKGLRSYIDRIPC*STQHST
Trigger: GGTACTGTGCTGTGTAGACAAACAGGGGATCCTATC...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCAGGTGTGACTGCCAGTaGGAATCATCGAACTGTATG +
Preference number: 5 (lower is better)
Translates to: PKQAGRGYNPVAFREKEARCDCQ*ESSNCM
Trigger: CATACAGTTCGATGATTCCAACTGGCAGTCACACCT...GGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp TTTACCAAGGGCCTGAGGTCATACATTCAAGAGTGCCCCTGGCAAGGCCGGGGAAGGTGTGACTGCCAGTaGGAATCATCGAACTGTATG +
Preference number: 5 (lower is better)
Translates to: FTKGLRSYIQECPWQGRGRCDCQ*ESSNCM
Trigger: CATACAGTTCGATGATTCCAACTGGCAGTCACACCT...TCCCCGGCCTTGCCAGGGGCACTCTTGAATGTATGACCTCAGGCCCTTGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp ACACATGGGGGAGGGGCTGAGGATCCCTTTACCAAGGGCCTGAGGTCATACATTCTGGTGGCAGTGTCTTaGATGAAGAGGCTGATCATG +
Preference number: 5 (lower is better)
Translates to: THGGGAEDPFTKGLRSYILVAVS*MKRLIM
Trigger: CATGATCAGCCTCTTCATCAAAGACACTGCCACCAG...AATGTATGACCTCAGGCCCTTGGTAAAGGGATCCTCAGCCCCTCCCCCATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp GACCTTTTCCATCTTCAAGCCCAGAGGAAGGGAAGGTCTTCGGACCACAGGCAGCTGGTGGCAGTGTCTTaGATGAAGAGGCTGATCATG +
Preference number: 5 (lower is better)
Translates to: DLFHLQAQRKGRSSDHRQLVAVS*MKRLIM
Trigger: CATGATCAGCCTCTTCATCAAAGACACTGCCACCAG...CTGCCTGTGGTCCGAAGACCTTCCCTTCCTCTGGGCTTGAAGATGGAAAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAACACAGCTGCTGCGGCGGTaGTTTGGCTTGATGGGGATG +
Preference number: 5 (lower is better)
Translates to: PSWSSLGSVTINLFPQLTQLLRR*FGLMGM
Trigger: CATCCCCATCAAGCCAAACAACCGCCGCAGCAGCTG...TGTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp AAGAGCCGAAGCAGGCAGGCCGTGGCTACAACCCTGTGGCTTTTCGTGAAAAAGTTCTCTGCAAACACCTaGCTCCTGAGCTCATCTTCC +
Preference number: 5 (lower is better)
Translates to: KSRSRQAVATTLWLFVKKFSANT*LLSSSS
Trigger: GGAAGATGAGCTCAGGAGCAAGGTGTTTGCAGAGAA...CTTTTTCACGAAAAGCCACAGGGTTGTAGCCACGGCCTGCCTGCTTCGGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp CTTCCTGCTGGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCGGCGCTCTGTCATCATaGCTGCAAAGCATGACTGAG +
Preference number: 5 (lower is better)
Translates to: LPAGGPSWSSLGSVTINLGALSS*LQSMTE
Trigger: CTCAGTCATGCTTTGCAGCAATGATGACAGAGCGCC...GAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTTGCTTGAAGAGCTCCTaGGCCCCTGGAGTGAAACCT +
Preference number: 5 (lower is better)
Translates to: GYNPVAFREKEAQARKTICLKSS*APGVKP
Trigger: AGGTTTCACTCCAGGGGCCAAGGAGCTCTTCAAGCA...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp TTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCGGCGGTTGTTTGGCTaGATGGGGATGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FPQLTSMKESFHMTGLCLRRLFG*MGMVLG
Trigger: GCCCAGCACCATCCCCATCAAGCCAAACAACCGCCG...CAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp TTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGAGGAAGAGGCAGCTGTaGCGCAGGTTGGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: FPQLTSMKESFHMTGLCLRKRQL*RRLAEL
Trigger: GAGCTCGGCCAACCTGCGCAACAGCTGCCTCTTCCT...CAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp CCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGCATCTGCGCTCCTGCTCGTaGGAAAGGTGCAGGGTATTG +
Preference number: 5 (lower is better)
Translates to: PQLTSMKESFHMTGLCLHLRSCS*ERCRVL
Trigger: CAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAG...ATGCAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS-3UTR CAA 90 bp GGCTACAACCCTGTGGCTTTTCGTGAAAAAGAAGCCCAAGCCAGGAAGACAATTGGCGCTCTGTCATCATaGCTGCAAAGCATGACTGAG +
Preference number: 5 (lower is better)
Translates to: GYNPVAFREKEAQARKTIGALSS*LQSMTE
Trigger: CTCAGTCATGCTTTGCAGCAATGATGACAGAGCGCC...AATTGTCTTCCTGGCTTGGGCTTCTTTTTCACGAAAAGCCACAGGGTTGTAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 90 bp TTTGTCAAAGGGCTCTTTCTCCACAGAGGCTTGGTGCGGTGTACATaGGTGATGGAGATAAAGACAGTGTGCAAAACAATCAGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: FVKGLFLHRGLVRCT*VMEIKTVCKTIRAA
Trigger: AGCCGCCCTGATTGTTTTGCACACTGTCTTTATCTCCATCACTCATGTACACCGCACCAAGCCTCTGTGGAGAAAGAGCCCTTTGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 90 bp GAAACAGGAGCAGCGGTTACTGAGGTGCAGGAAGCTGCTTCTCCATaGCTCCTTCCATGTAAGACTTTTCTTCCGTTCTTTGAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: ETGAAVTEVQEAASP*LLPCKTFLPFFEVF
Trigger: AAACACCTCAAAGAACGGAAGAAAAGTCTTACATGGAAGGAGGCATGGAGAAGCAGCTTCCTGCACCTCAGTAACCGCTGCTCCTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000136720.8
ENSMUST00000141871.8
ENSMUST00000239299.2
CDS-3UTR CAA 90 bp TTTCCCCAACTAACATCAATGAAAGAGTCATTCCACATGACTGGGCTGTGTTTGATGGAGTTCGGCCACTaGATCTCTTTTCCATCCCTG +
Preference number: 5 (lower is better)
Translates to: FPQLTSMKESFHMTGLCLMEFGH*ISFPSL
Trigger: CAGGGATGGAAAAGAGATCAAGTGGCCGAACTCCAT...CAAACACAGCCCAGTCATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093912.11
CDS CAA 90 bp GATCCCCCGGAGCCTGCGCTCCACCTCCCGGCGCTTCAGCCGGTCTaGCCGCCCGATGAGGACGAGGTTGAGGAGCAGCAACAGGAACAG +
Preference number: 6 (lower is better)
Translates to: DPPEPALHLPALQPV*PPDEDEVEEQQQEQ
Trigger: CTGTTCCTGTTGCTGCTCCTCAACCTCGTCCTCATCGGGCGGCAAGACCGGCTGAAGCGCCGGGAGGTGGAGCGCAGGCTCCGGGGGATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp AGCCTGCGCTCCACCTCCCGGCGCTTCAGCCGGTCTTaGCGCCCGATGAGGACGAGGTTGAGGAGCAGCAAC +
Preference number: 6 (lower is better)
Translates to: SLRSTSRRFSRS*RPMRTRLRSSN
Trigger: GTTGCTGCTCCTCAACCTCGTCCTCATCGGGCGGCAAGACCGGCTGAAGCGCCGGGAGGTGGAGCGCAGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp GCAGCACAGCGCTGTGGCTCTCCTGCAGGGCGATGTTaGACAGGTGGTCGGAAAAGCGGCACAGGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: AAQRCGSPAGRC*TGGRKSGTGAQ
Trigger: CTGAGCGCCTGTGCCGCTTTTCCGACCACCTGTGCAACATCGCCCTGCAGGAGAGCCACAGCGCTGTGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 72 bp AGCACCGCCAGCAGCATCAGGGAGGCCCCGGGCCAGTaGAAACAGGAGCAGCGGTTACTGAGGTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: STASSIREAPGQ*KQEQRLLRCRK
Trigger: CTTCCTGCACCTCAGTAACCGCTGCTCCTGTTTCCACTGGCCCGGGGCCTCCCTGATGCTGCTGGCGGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000136720.8
ENSMUST00000141871.8
ENSMUST00000239299.2
CDS CAA 90 bp ACCTCCCGGCGCTTCAGCCGGTCTTGCCGCCCGATGAGGACGAGGTaGAGGAGCAGCAACAGGAACAGAGCAGAGGCGTTCACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TSRRFSRSCRPMRTR*RSSNRNRAEAFTSS
Trigger: GGAGCTGGTGAACGCCTCTGCTCTGTTCCTGTTGCTGCTCCTCAACCTCGTCCTCATCGGGCGGCAAGACCGGCTGAAGCGCCGGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp CCTCGTAGGGATCACCCTCTGTCCCAGGCTGAGCCTTaGTGGGCTCTTCCTCTCCGCCTTCAGTGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: PRRDHPLSQAEP*WALPLRLQCPC
Trigger: GCAGGGACACTGAAGGCGGAGAGGAAGAGCCCAGCAAGGCTCAGCCTGGGACAGAGGGTGATCCCTACGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CCA 72 bp GCGCTGTGGCTCTCCTGCAGGGCGATGTTGCACAGGTaGTCGGAAAAGCGGCACAGGCGCTCAGTGACACTG +
Preference number: 6 (lower is better)
Translates to: ALWLSCRAMLHR*SEKRHRRSVTL
Trigger: CAGTGTCACTGAGCGCCTGTGCCGCTTTTCCGACCACCTGTGCAACATCGCCCTGCAGGAGAGCCACAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 72 bp GCCTCCCCAATGACGTCTCCTTCAGGGTCTCTGCACTaGGGAGGCGGTAGAGCGCCAGGTGGTTCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: ASPMTSPSGSLH*GGGRAPGGSPA
Trigger: AGCAGGAGAACCACCTGGCGCTCTACCGCCTCCCCAGTGCAGAGACCCTGAAGGAGACGTCATTGGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 72 bp GGCACCAGCAACGGTACATTGTCGATGTTCTGTAGGTaGGGCCGCACCTGGTGGATGCCCCGGGGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: GTSNGTLSMFCR*GRTWWMPRGSL
Trigger: CAAGCTGCCCCGGGGCATCCACCAGGTGCGGCCCCACCTACAGAACATCGACAATGTACCGTTGCTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp CCGATCCCTTCATCGGAGCTCCAGCTGCTGCGGCGGTaGTTTGGCTTGATGGGGATGGTGCTGGGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: PIPSSELQLLRR*FGLMGMVLGSS
Trigger: CGAGCTGCCCAGCACCATCCCCATCAAGCCAAACAACCGCCGCAGCAGCTGGAGCTCCGATGAAGGGATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp GAGGGCTTGGGGCCGTCGGCAAGCCAGTCACTGCGCTCCTGCTCGTaGGAAAGGTGCAGGGTATTGTTCAGGGAGCCAGCAAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: EGLGPSASQSLRSCS*ERCRVLFREPARRA
Trigger: TGCCCTCCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCGACGGCCCCAAGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp AGCACCTCCCCGATCCCTTCATCGGAGCTCCAGCTGCTGCGGCGGTaGTTTGGCTTGATGGGGATGGTGCTGGGCAGCTCGCACATGGTG +
Preference number: 6 (lower is better)
Translates to: STSPIPSSELQLLRR*FGLMGMVLGSSHMV
Trigger: CACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCCAAACAACCGCCGCAGCAGCTGGAGCTCCGATGAAGGGATCGGGGAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 72 bp GGCCGGGGACCTGCACCAGCTCGATGCACTTGCCGTTaGGCTGAGAGGACAGCGTGCAGTTCATGGGCTTGT +
Preference number: 6 (lower is better)
Translates to: GRGPAPARCTCR*AERTACSSWAC
Trigger: ACAAGCCCATGAACTGCACGCTGTCCTCTCAGCTCAACGGCAAGTGCATCGAGCTGGTGCAGGTCCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 72 bp CCAGCCGGGCCTGGTACTGGGAGGACACCATGCCCATaGAGATCTGACCGCTCAGGGCCTGCATGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: PAGPGTGRTPCP*RSDRSGPACSL
Trigger: AAGACTGCATGCAGGCCCTGAGCGGTCAGATCTTCATGGGCATGGTGTCCTCCCAGTACCAGGCCCGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp GGCTTGGGGCCGTCGGCAAGCCAGTCACTGCGCTCCTaGTCGTTGGAAAGGTGCAGGGTATTGTTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: GLGPSASQSLRS*SLERCRVLFRE
Trigger: CTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCGACGGCCCCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp GCTCAGAGGGCTTGGGGCCGTCGGCAAGCCAGTCACTaGGCTCCTGCTCGTTGGAAAGGTGCAGGGTATTGT +
Preference number: 6 (lower is better)
Translates to: AQRAWGRRQASH*APARWKGAGYC
Trigger: ACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCGACGGCCCCAAGCCCTCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp AGAAGTCTGTGCAGGCCTCCACGACCACGTCGGCACTaGCATGGGACAGCATCTGCTCTGTGCTGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: RSLCRPPRPRRH*HGTASALCWWQ
Trigger: CTGCCACCAGCACAGAGCAGATGCTGTCCCATGGCAGTGCCGACGTGGTCGTGGAGGCCTGCACAGACTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp ACAGAGGGTAGATGTCAGCGCCATCCCAGAAGTCTGTaGAGGCCTCCACGACCACGTCGGCACTGCCATGGG +
Preference number: 6 (lower is better)
Translates to: TEGRCQRHPRSL*RPPRPRRHCHG
Trigger: CCCATGGCAGTGCCGACGTGGTCGTGGAGGCCTGCACAGACTTCTGGGATGGCGCTGACATCTACCCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 72 bp TCTGTGCAGGCCTCCACGACCACGTCGGCACTGCCATaGGACAGCATCTGCTCTGTGCTGGTGGCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: SVQASTTTSALP*DSICSVLVAVS
Trigger: AGACACTGCCACCAGCACAGAGCAGATGCTGTCCCATGGCAGTGCCGACGTGGTCGTGGAGGCCTGCACAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 72 bp GTGCTGGGCAGCTCGCACATGGTGAATATGCTGTTCTaGCCGGGGACCTGCACCAGCTCGATGCACTTGCCG +
Preference number: 6 (lower is better)
Translates to: VLGSSHMVNMLF*PGTCTSSMHLP
Trigger: CGGCAAGTGCATCGAGCTGGTGCAGGTCCCCGGCCAGAACAGCATATTCACCATGTGCGAGCTGCCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 72 bp CCCTTCATCGGAGCTCCAGCTGCTGCGGCGGTTGTTTaGCTTGATGGGGATGGTGCTGGGCAGCTCGCACAT +
Preference number: 6 (lower is better)
Translates to: PFIGAPAAAAVV*LDGDGAGQLAH
Trigger: ATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCCAAACAACCGCCGCAGCAGCTGGAGCTCCGATGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp TCATCGGAGCTCCAGCTGCTGCGGCGGTTGTTTGGCTaGATGGGGATGGTGCTGGGCAGCTCGCACATGGTG +
Preference number: 6 (lower is better)
Translates to: SSELQLLRRLFG*MGMVLGSSHMV
Trigger: CACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCCAAACAACCGCCGCAGCAGCTGGAGCTCCGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp CACAGGCGCTCAGTGACACTGGCGTTACACAGGTTCAGCAGCACGTaGAGGCCCAGCGGCTTGAGGGAGGTCAGGTGTGACTGCCAGTTG +
Preference number: 6 (lower is better)
Translates to: HRRSVTLALHRFSST*RPSGLREVRCDCQL
Trigger: CAACTGGCAGTCACACCTGACCTCCCTCAAGCCGCTGGGCCTCAACGTGCTGCTGAACCTGTGTAACGCCAGTGTCACTGAGCGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CAA 90 bp GCAATGCTGACATCACTCTGGAGGAAGAGGCAGCTGTTGCGCAGGTaGGCCGAGCTCCCCAGGCAGCAAGTCACCTCCCCATACTCCTGC +
Preference number: 6 (lower is better)
Translates to: AMLTSLWRKRQLLRR*AELPRQQVTSPYSC
Trigger: GCAGGAGTATGGGGAGGTGACTTGCTGCCTGGGGAGCTCGGCCAACCTGCGCAACAGCTGCCTCTTCCTCCAGAGTGATGTCAGCATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp GCCGGCGCTCTGTCATCATTGCTGCAAAGCATGACTGAGGAGCAGTaGGTGAGGTTGCGGGCCCGGGCGCTGTCACAAAAGCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: AGALSSLLQSMTEEQ*VRLRARALSQKLCS
Trigger: GCTGCAGAGCTTTTGTGACAGCGCCCGGGCCCGCAACCTCACCAACTGCTCCTCAGTCATGCTTTGCAGCAATGATGACAGAGCGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 72 bp GTAACGGAGCCCAAGCTGTGCAGCAGACTGGCACTGTaGCTCAGAGTTGGCGATGTGCCCTGGATCACCCTC +
Preference number: 6 (lower is better)
Translates to: VTEPKLCSRLAL*LRVGDVPWITL
Trigger: GAGGGTGATCCAGGGCACATCGCCAACTCTGAGCCACAGTGCCAGTCTGCTGCACAGCTTGGGCTCCGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CCA 72 bp GGCCGTCGGCAAGCCAGTCACTGCGCTCCTGCTCGTTaGAAAGGTGCAGGGTATTGTTCAGGGAGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: GRRQASHCAPAR*KGAGYCSGSQQ
Trigger: TTGCTGGCTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGCCGACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp GTGCAGTCGGTGAAGAGGGGCACCAGCAACGGTACATaGTCGATGTTCTGTAGGTGGGGCCGCACCTGGTGG +
Preference number: 6 (lower is better)
Translates to: VQSVKRGTSNGT*SMFCRWGRTWW
Trigger: CCACCAGGTGCGGCCCCACCTACAGAACATCGACAATGTACCGTTGCTGGTGCCCCTCTTCACCGACTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp GCAAGCCAGTCACTGCGCTCCTGCTCGTTGGAAAGGTGCAGGGTATaGTTCAGGGAGCCAGCAAGGAGGGCATCGTGTTCATGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: ASQSLRSCSLERCRV*FREPARRASCSWGS
Trigger: GGAGCCCCATGAACACGATGCCCTCCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp CCGATCCCTTCATCGGAGCTCCAGCTGCTGCGGCGGTTGTTTGGCTaGATGGGGATGGTGCTGGGCAGCTCGCACATGGTGAATATGCTG +
Preference number: 6 (lower is better)
Translates to: PIPSSELQLLRRLFG*MGMVLGSSHMVNML
Trigger: CAGCATATTCACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCCAAACAACCGCCGCAGCAGCTGGAGCTCCGATGAAGGGATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 72 bp AGGAGCGGTGGCAGCTGCACCAGACAAGACAGGAACTaGATGACCACGAGGGTCAGCTGGCACTGCAACAGG +
Preference number: 6 (lower is better)
Translates to: RSGGSCTRQDRN*MTTRVSWHCNR
Trigger: CCTGTTGCAGTGCCAGCTGACCCTCGTGGTCATTCAGTTCCTGTCTTGTCTGGTGCAGCTGCCACCGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp GCAAGCCAGTCACTGCGCTCCTGCTCGTTGGAAAGGTaGAGGGTATTGTTCAGGGAGCCAGCAAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: ASQSLRSCSLER*RVLFREPARRA
Trigger: TGCCCTCCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGACTGGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp AGGTCTCCCGGCTCCAAGACAATGTGCTCATCGTCCTaGATGCCCCTCAGGGAGGCAAAGGACTCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: RSPGSKTMCSSS*MPLREAKDSWP
Trigger: TGGCCAGGAGTCCTTTGCCTCCCTGAGGGGCATCAAGGACGATGAGCACATTGTCTTGGAGCCGGGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp TCAGTGACACTGGCGTTACACAGGTTCAGCAGCACGTaGAGGCCCAGCGGCTTGAGGGAGGTCAGGTGTGAC +
Preference number: 6 (lower is better)
Translates to: SVTLALHRFSST*RPSGLREVRCD
Trigger: GTCACACCTGACCTCCCTCAAGCCGCTGGGCCTCAACGTGCTGCTGAACCTGTGTAACGCCAGTGTCACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CAA 90 bp GTTCGGCCACTTGATCTCTTTTCCATCCCTGAGAGCATCTTGGATTaGGTCGATGATCCCCCGGAGCCTGCGCTCCACCTCCCGGCGCTT +
Preference number: 6 (lower is better)
Translates to: VRPLDLFSIPESILD*VDDPPEPALHLPAL
Trigger: AAGCGCCGGGAGGTGGAGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGATCAAGTGGCCGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp TGGAGCTGGAGAAGGGTGTACTGCCAGGACGTGACCCCAGGTGCCTaGAACATGAAGCGCAGGGCATTGGTGATGAGAAAGCCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: WSWRRVYCQDVTPGA*NMKRRALVMRKPAR
Trigger: CCTGGCTGGCTTTCTCATCACCAATGCCCTGCGCTTCATGTTCAAGGCACCTGGGGTCACGTCCTGGCAGTACACCCTTCTCCAGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp CTGAGCTCATCTTCCAAAGAGAAGTACACAAAGCGGATGCAGGCGTaGACCAGCCCATCGATGAGGCGCACGATGTCCAGCCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LSSSSKEKYTKRMQA*TSPSMRRTMSSRAW
Trigger: CCAGGCCCGGCTGGACATCGTGCGCCTCATCGATGGGCTGGTCAACGCCTGCATCCGCTTTGTGTACTTCTCTTTGGAAGATGAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp CTGATGCTTTCTTCTTGTCGGAAGGTCAGGGAGCAAGGCAGGCTGTaGAGCTGCCCTGATAGCTGCAGGGGAGAAAGGCCATCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: LMLSSCRKVREQGRL*SCPDSCRGERPSEA
Trigger: GGCCTCGGATGGCCTTTCTCCCCTGCAGCTATCAGGGCAGCTCAACAGCCTGCCTTGCTCCCTGACCTTCCGACAAGAAGAAAGCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp CATGGAGTTCGGCCACTTGATCTCTTTTCCATCCCTGAGAGCATCTaGGATTTGGTCGATGATCCCCCGGAGCCTGCGCTCCACCTCCCG +
Preference number: 6 (lower is better)
Translates to: HGVRPLDLFSIPESI*DLVDDPPEPALHLP
Trigger: CGGGAGGTGGAGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGATCAAGTGGCCGAACTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp AGCACGGTCTCTGGGCTGGGGTTTGGCCATGATAGGATCCCCTGTTaGTCTACACAGCACAGTACCGTAACGGAGCCCAAGCTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: STVSGLGFGHDRIPC*STQHSTVTEPKLCS
Trigger: GCTGCACAGCTTGGGCTCCGTTACGGTACTGTGCTGTGTAGACAAACAGGGGATCCTATCATGGCCAAACCCCAGCCCAGAGACCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CAA 90 bp ACGTTGAGGCCCAGCGGCTTGAGGGAGGTCAGGTGTGACTGCCAGTaGGAATCATCGAACTGTATGCACGAGGGGTTCTGTTGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: TLRPSGLREVRCDCQ*ESSNCMHEGFCWSW
Trigger: CCAGGACCAACAGAACCCCTCGTGCATACAGTTCGATGATTCCAACTGGCAGTCACACCTGACCTCCCTCAAGCCGCTGGGCCTCAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS TCA 72 bp CTTCTTGTCGGAAGGTCAGGGAGCAAGGCAGGCTGTTaGGCTGCCCTGATAGCTGCAGGGGAGAAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: LLVGRSGSKAGC*AALIAAGEKGH
Trigger: ATGGCCTTTCTCCCCTGCAGCTATCAGGGCAGCTCAACAGCCTGCCTTGCTCCCTGACCTTCCGACAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp CTGGAGAAGGGTGTACTGCCAGGACGTGACCCCAGGTaGCTTGAACATGAAGCGCAGGGCATTGGTGATGAG +
Preference number: 6 (lower is better)
Translates to: LEKGVLPGRDPR*LEHEAQGIGDE
Trigger: CTCATCACCAATGCCCTGCGCTTCATGTTCAAGGCACCTGGGGTCACGTCCTGGCAGTACACCCTTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS GCA 72 bp TTGAGGCCCAGCGGCTTGAGGGAGGTCAGGTGTGACTaGCAGTTGGAATCATCGAACTGTATGCACGAGGGG +
Preference number: 6 (lower is better)
Translates to: LRPSGLREVRCD*QLESSNCMHEG
Trigger: CCCCTCGTGCATACAGTTCGATGATTCCAACTGGCAGTCACACCTGACCTCCCTCAAGCCGCTGGGCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CCA 72 bp CAAGCTGTGCAGCAGACTGGCACTGTGGCTCAGAGTTaGCGATGTGCCCTGGATCACCCTCAGAAAGTGACC +
Preference number: 6 (lower is better)
Translates to: QAVQQTGTVAQS*RCALDHPQKVT
Trigger: GGTCACTTTCTGAGGGTGATCCAGGGCACATCGCCAACTCTGAGCCACAGTGCCAGTCTGCTGCACAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CAA 72 bp CCAAGCTGTGCAGCAGACTGGCACTGTGGCTCAGAGTaGGCGATGTGCCCTGGATCACCCTCAGAAAGTGAC +
Preference number: 6 (lower is better)
Translates to: PSCAADWHCGSE*AMCPGSPSESD
Trigger: GTCACTTTCTGAGGGTGATCCAGGGCACATCGCCAACTCTGAGCCACAGTGCCAGTCTGCTGCACAGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CAA 72 bp TCTTCTTGTCGGAAGGTCAGGGAGCAAGGCAGGCTGTaGAGCTGCCCTGATAGCTGCAGGGGAGAAAGGCCA +
Preference number: 6 (lower is better)
Translates to: SSCRKVREQGRL*SCPDSCRGERP
Trigger: TGGCCTTTCTCCCCTGCAGCTATCAGGGCAGCTCAACAGCCTGCCTTGCTCCCTGACCTTCCGACAAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp ACACTGGCGTTACACAGGTTCAGCAGCACGTTGAGGCCCAGCGGCTaGAGGGAGGTCAGGTGTGACTGCCAGTTGGAATCATCGAACTGT +
Preference number: 6 (lower is better)
Translates to: TLALHRFSSTLRPSG*REVRCDCQLESSNC
Trigger: ACAGTTCGATGATTCCAACTGGCAGTCACACCTGACCTCCCTCAAGCCGCTGGGCCTCAACGTGCTGCTGAACCTGTGTAACGCCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS TCA 72 bp CACGTTGAGGCCCAGCGGCTTGAGGGAGGTCAGGTGTaGCTGCCAGTTGGAATCATCGAACTGTATGCACGA +
Preference number: 6 (lower is better)
Translates to: HVEAQRLEGGQV*LPVGIIELYAR
Trigger: TCGTGCATACAGTTCGATGATTCCAACTGGCAGTCACACCTGACCTCCCTCAAGCCGCTGGGCCTCAACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS TCA 72 bp AAGAGGAGGAGCCCTTCTGCATCATCTCGGGACACCTaGTTCAGGTCGTCATGGAGAGAGCCAGCATGGCTG +
Preference number: 6 (lower is better)
Translates to: KRRSPSASSRDT*FRSSWREPAWL
Trigger: CAGCCATGCTGGCTCTCTCCATGACGACCTGAATCAGGTGTCCCGAGATGATGCAGAAGGGCTCCTCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp ATGTGCCCTGGATCACCCTCAGAAAGTGACCCCAAATaGAGCGCAGCATCTCCTGAGAGGAGACGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: MCPGSPSESDPK*SAASPERRRLQ
Trigger: CTGAAGCCGTCTCCTCTCAGGAGATGCTGCGCTGCATTTGGGGTCACTTTCTGAGGGTGATCCAGGGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS GCA 72 bp TCTACACAGCACAGTACCGTAACGGAGCCCAAGCTGTaGAGCAGACTGGCACTGTGGCTCAGAGTTGGCGAT +
Preference number: 6 (lower is better)
Translates to: STQHSTVTEPKL*SRLALWLRVGD
Trigger: ATCGCCAACTCTGAGCCACAGTGCCAGTCTGCTGCACAGCTTGGGCTCCGTTACGGTACTGTGCTGTGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CCA 72 bp GGCCACTTGATCTCTTTTCCATCCCTGAGAGCATCTTaGATTTGGTCGATGATCCCCCGGAGCCTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: GHLISFPSLRAS*IWSMIPRSLRS
Trigger: GGAGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGATCAAGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp TCACTGCGCTCCTGCTCGTTGGAAAGGTGCAGGGTATaGTTCAGGGAGCCAGCAAGGAGGGCATCGTGTTCA +
Preference number: 6 (lower is better)
Translates to: SLRSCSLERCRV*FREPARRASCS
Trigger: TGAACACGATGCCCTCCTTGCTGGCTCCCTGAACAATACCCTGCACCTTTCCAACGAGCAGGAGCGCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp CGTTCTTTGAGGTGTTTCTCCAATACAGCCTCCAGCTaGTCCTTCAGGACACTGAGGGCCTTCCGGGTAGAC +
Preference number: 6 (lower is better)
Translates to: RSLRCFSNTASS*SFRTLRAFRVD
Trigger: GTCTACCCGGAAGGCCCTCAGTGTCCTGAAGGAGCAGCTGGAGGCTGTATTGGAGAAACACCTCAAAGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000103034.10
ENSMUST00000136720.8
ENSMUST00000141871.8
ENSMUST00000239299.2
CDS CCA 72 bp TTGATCTCTTTTCCATCCCTGAGAGCATCTTGGATTTaGTCGATGATCCCCCGGAGCCTGCGCTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: LISFPSLRASWI*SMIPRSLRSTS
Trigger: GGAGGTGGAGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp CTTGATCTCTTTTCCATCCCTGAGAGCATCTTGGATTaGGTCGATGATCCCCCGGAGCCTGCGCTCCACCTC +
Preference number: 6 (lower is better)
Translates to: LDLFSIPESILD*VDDPPEPALHL
Trigger: GAGGTGGAGCGCAGGCTCCGGGGGATCATCGACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGATCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp AGAAGGGTGTACTGCCAGGACGTGACCCCAGGTGCCTaGAACATGAAGCGCAGGGCATTGGTGATGAGAAAG +
Preference number: 6 (lower is better)
Translates to: RRVYCQDVTPGA*NMKRRALVMRK
Trigger: CTTTCTCATCACCAATGCCCTGCGCTTCATGTTCAAGGCACCTGGGGTCACGTCCTGGCAGTACACCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp TCTGGGCTGGGGTTTGGCCATGATAGGATCCCCTGTTaGTCTACACAGCACAGTACCGTAACGGAGCCCAAG +
Preference number: 6 (lower is better)
Translates to: SGLGFGHDRIPC*STQHSTVTEPK
Trigger: CTTGGGCTCCGTTACGGTACTGTGCTGTGTAGACAAACAGGGGATCCTATCATGGCCAAACCCCAGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS CAA 72 bp TCTTCCAAAGAGAAGTACACAAAGCGGATGCAGGCGTaGACCAGCCCATCGATGAGGCGCACGATGTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSKEKYTKRMQA*TSPSMRRTMSS
Trigger: GCTGGACATCGTGCGCCTCATCGATGGGCTGGTCAACGCCTGCATCCGCTTTGTGTACTTCTCTTTGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp GCAAAATCCTCGAACCAGGCCGGCGCTCTGTCATCATaGCTGCAAAGCATGACTGAGGAGCAGTTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: AKSSNQAGALSS*LQSMTEEQLVR
Trigger: CCTCACCAACTGCTCCTCAGTCATGCTTTGCAGCAATGATGACAGAGCGCCGGCCTGGTTCGAGGATTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS TCA 72 bp GGACCCGAATCTCGTGTAACTTTACAATCTCGTTGGTaGCTACCACTAGGACCAGGGACAGGCAGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: GPESRVTLQSRW*LPLGPGTGSPG
Trigger: TCCTGGGCTGCCTGTCCCTGGTCCTAGTGGTAGTCACCAACGAGATTGTAAAGTTACACGAGATTCGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS GCA 72 bp GAGCTCCCCAGGCAGCAAGTCACCTCCCCATACTCCTaGATGATCTTTATCATCTCACACATGGTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: ELPRQQVTSPYS*MIFIISHMVSG
Trigger: CCCTGACACCATGTGTGAGATGATAAAGATCATGCAGGAGTATGGGGAGGTGACTTGCTGCCTGGGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp CTGCTCAATGAGCCGGATGATGCTGATGCTTTCTTCTaGTCGGAAGGTCAGGGAGCAAGGCAGGCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: LLNEPDDADAFF*SEGQGARQAVE
Trigger: CTCAACAGCCTGCCTTGCTCCCTGACCTTCCGACAAGAAGAAAGCATCAGCATCATCCGGCTCATTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp ACACGGACCCGAATCTCGTGTAACTTTACAATCTCGTaGGTGACTACCACTAGGACCAGGGACAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: TRTRISCNFTIS*VTTTRTRDRQP
Trigger: GGGCTGCCTGTCCCTGGTCCTAGTGGTAGTCACCAACGAGATTGTAAAGTTACACGAGATTCGGGTCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 72 bp CAGGGCTATGATGTCTCCTTCTACCAACAGGCTAACTaGCAGGTTCACCAGGTGTCCATCTCTGTAAGCCCA +
Preference number: 6 (lower is better)
Translates to: QGYDVSFYQQAN*QVHQVSISVSP
Trigger: TGGGCTTACAGAGATGGACACCTGGTGAACCTGCCAGTTAGCCTGTTGGTAGAAGGAGACATCATAGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp GTTGGAATCATCGAACTGTATGCACGAGGGGTTCTGTaGGTCCTGGGACAGGCTCAGCATCTCCAAGTGGTA +
Preference number: 6 (lower is better)
Translates to: VGIIELYARGVL*VLGQAQHLQVV
Trigger: TACCACTTGGAGATGCTGAGCCTGTCCCAGGACCAACAGAACCCCTCGTGCATACAGTTCGATGATTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000125918.2
ENSMUST00000239299.2
CDS TCA 72 bp ACAGTGTGCAAAACAATCAGGGCGGCTGTGAGCTTCTaGGCGGATAGCAACCCATTGGCAAAATCCTCGAAC +
Preference number: 6 (lower is better)
Translates to: TVCKTIRAAVSF*ADSNPLAKSSN
Trigger: GTTCGAGGATTTTGCCAATGGGTTGCTATCCGCTCAGAAGCTCACAGCCGCCCTGATTGTTTTGCACACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CCA 72 bp GAGGGTAACAAAAGCAGGATAGCCATAAAATGTCTGTaGTACTCAGGAGCGGTGGCAGCTGCACCAGACAAG +
Preference number: 6 (lower is better)
Translates to: EGNKSRIAIKCL*YSGAVAAAPDK
Trigger: CTTGTCTGGTGCAGCTGCCACCGCTCCTGAGTACCACAGACATTTTATGGCTATCCTGCTTTTGTTACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp GGTGCAAAGGGCATATGGAGGTCTGGATACATGGAGTTCGGCCACTaGATCTCTTTTCCATCCCTGAGAGCATCTTGGATTTGGTCGATG +
Preference number: 6 (lower is better)
Translates to: GAKGIWRSGYMEFGH*ISFPSLRASWIWSM
Trigger: CATCGACCAAATCCAAGATGCTCTCAGGGATGGAAAAGAGATCAAGTGGCCGAACTCCATGTATCCAGACCTCCATATGCCCTTTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 90 bp TTCACCAGCTCCACGCCCTTCCATGTAAGACTTTTCTTCCGTTCTTaGAGGTGTTTCTCCAATACAGCCTCCAGCTGCTCCTTCAGGACA +
Preference number: 6 (lower is better)
Translates to: FTSSTPFHVRLFFRS*RCFSNTASSCSFRT
Trigger: TGTCCTGAAGGAGCAGCTGGAGGCTGTATTGGAGAAACACCTCAAAGAACGGAAGAAAAGTCTTACATGGAAGGGCGTGGAGCTGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103034.10
CDS GCA 72 bp GCAGCGGTTACTGAGGTGCAGGAAGCTGCTTCTCCATaGCTCCTTCCATGTAAGACTTTTCTTCCGTTCTTT +
Preference number: 6 (lower is better)
Translates to: AAVTEVQEAASP*LLPCKTFLPFF
Trigger: AAAGAACGGAAGAAAAGTCTTACATGGAAGGAGGCATGGAGAAGCAGCTTCCTGCACCTCAGTAACCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000136720.8
ENSMUST00000141871.8
ENSMUST00000239299.2
CDS CAA 72 bp TCCACGCCCTTCCATGTAAGACTTTTCTTCCGTTCTTaGAGGTGTTTCTCCAATACAGCCTCCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: STPFHVRLFFRS*RCFSNTASSCS
Trigger: GGAGCAGCTGGAGGCTGTATTGGAGAAACACCTCAAAGAACGGAAGAAAAGTCTTACATGGAAGGGCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103034.10
CDS TCA 72 bp GGGCTCTTTCTCCACAGAGGCTTGGTGCGGTGTACATaGGTGATGGAGATAAAGACAGTGTGCAAAACAATC +
Preference number: 6 (lower is better)
Translates to: GLFLHRGLVRCT*VMEIKTVCKTI
Trigger: GATTGTTTTGCACACTGTCTTTATCTCCATCACTCATGTACACCGCACCAAGCCTCTGTGGAGAAAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2
CDS CAA 72 bp CATGCCTCCTTCCATGTAAGACTTTTCTTCCGTTCTTaGAGGTGTTTCTCCAATACAGCCTCCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: HASFHVRLFFRS*RCFSNTASSCS
Trigger: GGAGCAGCTGGAGGCTGTATTGGAGAAACACCTCAAAGAACGGAAGAAAAGTCTTACATGGAAGGAGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000136720.8
ENSMUST00000141871.8
ENSMUST00000239299.2
CDS GCA 72 bp GGTCTTCTTAGGAATGGACTGAAGGTTTTTGCCCGTTaGCATAGACATGATGGAGCTATGTGGTGGTTTTCC +
Preference number: 6 (lower is better)
Translates to: GLLRNGLKVFAR*HRHDGAMWWFS
Trigger: GGAAAACCACCACATAGCTCCATCATGTCTATGGCAACGGGCAAAAACCTTCAGTCCATTCCTAAGAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093912.11
ENSMUST00000103033.8
ENSMUST00000239299.2