Pregenerated sensors for TMEM92 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075610Ensembl transcript IDs: ENSMUST00000100554.8, ENSMUST00000143620.9, ENSMUST00000162809.3
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGGCATGGGCACCAGGAACTGTCTTCACTCTCCCCACCCACTCTaGACAGTCCAAGCTCCAAGCTGTCCTCAGCCCCTCAGCCACAGG | + |
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Preference number: 1 (lower is better) Translates to: QGMGTRNCLHSPHPL*TVQAPSCPQPLSHR Trigger: CCTGTGGCTGAGGGGCTGAGGACAGCTTGGAGCTTGGACTGTCCAGAGTGGGTGGGGAGAGTGAAGACAGTTCCTGGTGCCCATGCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
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| 3UTR CCA 90 bp | AGCTGTAGAGTGTGGAACACAGGCTCACCAGAAGGAAGAGGAAGGTaGGGTAGACCTCCCCTCTCCTTCCAGGGGAATCCAGCGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SCRVWNTGSPEGRGR*GRPPLSFQGNPAEE Trigger: TTCCTCCGCTGGATTCCCCTGGAAGGAGAGGGGAGGTCTACCCCACCTTCCTCTTCCTTCTGGTGAGCCTGTGTTCCACACTCTACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR CCA 90 bp | CACAGGGATGAGTATTTCTTGGGGATCCTGAATTTGAAGCTAGCCTaGTCTACAGAGGGAGTCCAGGACAGCCACACCTGCCCTGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: HRDEYFLGILNLKLA*STEGVQDSHTCPAS Trigger: GCTGGCAGGGCAGGTGTGGCTGTCCTGGACTCCCTCTGTAGACCAGGCTAGCTTCAAATTCAGGATCCCCAAGAAATACTCATCCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
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| 3UTR GCA 90 bp | ATTCACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTaGAGTCAGTCACCACTGGAAGAAGATGGAAGGGTTTCCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: IHSHLGCSILPAGAQ*SQSPLEEDGRVSSA Trigger: GGCTGAGGAAACCCTTCCATCTTCTTCCAGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR TCA 90 bp | TGGAAACGTAGTCCCTGTGTTTTCTGCATTGCTACAGAGGGACAGTaGGGTCCTCTCTGCCCATGCATGGTTGGAAGATGGCTCAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: WKRSPCVFCIATEGQ*GPLCPCMVGRWLRV Trigger: GACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACCTCACTGTCCCTCTGTAGCAATGCAGAAAACACAGGGACTACGTTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR GCA 90 bp | AGTCTGTGCAGTTCAGTCTTCAAACTCTTCCAGGCACAGAAGTGCTaGTGTAGGATGGCAGAGCAAGCTGTCCAGACAAGATTGGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SLCSSVFKLFQAQKC*CRMAEQAVQTRLAA Trigger: GGCTGCCAATCTTGTCTGGACAGCTTGCTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAAGAGTTTGAAGACTGAACTGCACAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR GCA 90 bp | AGGTCCTCTCTGCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTaGAGTTCAGTCTTCAAACTCTTCCAGGCACAGAAGTGCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: RSSLPMHGWKMAQSL*SSVFKLFQAQKCCC Trigger: ACAGCAGCACTTCTGTGCCTGGAAGAGTTTGAAGACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR GCA 90 bp | TCTATGCATTCACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTaGTCAGTGCAGTCAGTCACCACTGGAAGAAGATGGAAGGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: SMHSLTSWLLHPPSR*SVQSVTTGRRWKGF Trigger: GAAACCCTTCCATCTTCTTCCAGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATGCATAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR GCA 90 bp | CAGAGTCTGTGCAGTTCAGTCTTCAAACTCTTCCAGGCACAGAAGTaGTGCTGTAGGATGGCAGAGCAAGCTGTCCAGACAAGATTGGCA | + |
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Preference number: 1 (lower is better) Translates to: QSLCSSVFKLFQAQK*CCRMAEQAVQTRLA Trigger: TGCCAATCTTGTCTGGACAGCTTGCTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAAGAGTTTGAAGACTGAACTGCACAGACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR CCA 90 bp | GTTCAGTCTTCAAACTCTTCCAGGCACAGAAGTGCTGCTGTAGGATaGCAGAGCAAGCTGTCCAGACAAGATTGGCAGCCCACTAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: VQSSNSSRHRSAAVG*QSKLSRQDWQPTSN Trigger: ATTGCTAGTGGGCTGCCAATCTTGTCTGGACAGCTTGCTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAAGAGTTTGAAGACTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR CCA 90 bp | CATTGCTACAGAGGGACAGTGAGGTCCTCTCTGCCCATGCATGGTTaGAAGATGGCTCAGAGTCTGTGCAGTTCAGTCTTCAAACTCTTC | + |
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Preference number: 1 (lower is better) Translates to: HCYRGTVRSSLPMHG*KMAQSLCSSVFKLF Trigger: GAAGAGTTTGAAGACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACCTCACTGTCCCTCTGTAGCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR TCA 90 bp | ACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCACCACTCAGGGCCCTCAGGCCTaGGGCTGTAGGGAGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: TSWLLHPPSRCSVQSVTTQGPQA*GCREEV Trigger: CACCTCCTCCCTACAGCCTCAGGCCTGAGGGCCCTG...AGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143620.9 |
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| 3UTR CAA 90 bp | CCCCGAGGACCCAGGAAGGTGAAGGTCTATGCATTCACTCACATCTaGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: PRGPRKVKVYAFTHI*AAPSSQQVLSAVSH Trigger: GTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATGCATAGACCTTCACCTTCCTGGGTCCTCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAACACAGGCTCACCAGAAGGAAGAGGAAGGTGGGGTAGACCTCCCCTCTCCCACTCACATCTTGGCTaGTCCATCCTCCCAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: WNTGSPEGRGRWGRPPLSHSHLG*SILPAG Trigger: ACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTG...GGAGAGGGGAGGTCTACCCCACCTTCCTCTTCCTTCTGGTGAGCCTGTGTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR TCA 90 bp | CACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCAGGTTTCCTCAGCCTCTaGCCTTGTCTCATCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: HSHLGCSILPAGAQCSQSGFLSL*PCLIPT Trigger: AGTGGGGATGAGACAAGGTCAGAGGCTGAGGAAACC...TGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR GCA 90 bp | CACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCATTCCAGGCACAGAAGTaGTGCTGTAGGATGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HSHLGCSILPAGAQCSQSFQAQK*CCRMAE Trigger: CTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAA...TGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCACCACTGGAAGAAGATGTTCCAGGCACAGAAGTaGTGCTGTAGGATGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: APSSQQVLSAVSHHWKKMFQAQK*CCRMAE Trigger: CTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAA...CATCTTCTTCCAGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGGCACAGAAGTGCTGCTGTAGGATGGCAGAGCAAGCTGTCCAGACAAGAGGTTTCCTCAGCCTCTaGCCTTGTCTCATCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: FQAQKCCCRMAEQAVQTRGFLSL*PCLIPT Trigger: AGTGGGGATGAGACAAGGTCAGAGGCTGAGGAAACC...TCTTGTCTGGACAGCTTGCTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTCCTTCCAGGGGAATCCAGCGGAGGAATGTAGAGGAAGTATTCCTTGGCGAGGACCCAGGAAGGTaGAGGTCTATGCATTCACTC | + |
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Preference number: 2 (lower is better) Translates to: PSPSRGIQRRNVEEVFLGEDPGR*RSMHSL Trigger: GAGTGAATGCATAGACCTTCACCTTCCTGGGTCCTC...GCCAAGGAATACTTCCTCTACATTCCTCCGCTGGATTCCCCTGGAAGGAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR GCA 90 bp | TTCACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTTTCCAGGCACAGAAGTaGTGCTGTAGGATGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FTHILAAPSSQQVLSAVSFQAQK*CCRMAE Trigger: CTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAA...ACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | CCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCACCACTGGAAGAAGATGGAAAGTGCTGCTGTAGGATaGCAGAGCAAGCTGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PSSQQVLSAVSHHWKKMESAAVG*QSKLSR Trigger: TCTGGACAGCTTGCTCTGCCATCCTACAGCAGCACT...TTCCATCTTCTTCCAGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR CAA 90 bp | CTTCTGTGGTGGCACAGGGATGAGTATTTCTTGGGGATCCTGAATTaGAAGCTAGCCTGGTCTACAGAGGGAGTCCAGGACAGCCACACC | + |
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Preference number: 2 (lower is better) Translates to: LLWWHRDEYFLGILN*KLAWSTEGVQDSHT Trigger: GGTGTGGCTGTCCTGGACTCCCTCTGTAGACCAGGCTAGCTTCAAATTCAGGATCCCCAAGAAATACTCATCCCTGTGCCACCACAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
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| 3UTR-3UTR CCA 90 bp | TCTATGCATTCACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGAGTGCTGCTGTAGGATaGCAGAGCAAGCTGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SMHSLTSWLLHPPSRCSVSAAVG*QSKLSR Trigger: TCTGGACAGCTTGCTCTGCCATCCTACAGCAGCACT...CACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATGCATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCACCACTGGAAGAAGATGTGCATGGTTGGAAGATaGCTCAGAGTCTGTGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: APSSQQVLSAVSHHWKKMCMVGR*LRVCAV Trigger: AACTGCACAGACTCTGAGCCATCTTCCAACCATGCA...CATCTTCTTCCAGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | ACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCACCACTCTTAGCAGCCAGCTATaGAAACGTAGTCCCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: TSWLLHPPSRCSVQSVTTLSSQL*KRSPCV Trigger: AACACAGGGACTACGTTTCCATAGCTGGCTGCTAAG...AGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | ACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCACCACTGCAGTCAGTCACCACTaGAAGAAGATGGAAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: TSWLLHPPSRCSVQSVTTAVSHH*KKMEGF Trigger: AAACCCTTCCATCTTCTTCCAGTGGTGACTGACTGC...AGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR CAA 90 bp | AGTCACCACTGGAAGAAGATGGAAGGGTTTCCTCAGCCTCTGACCTaGTCTCATCCCCACTTAGCAGCCAGCTATGGAAACGTAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SHHWKKMEGFPQPLT*SHPHLAASYGNVVP Trigger: AGGGACTACGTTTCCATAGCTGGCTGCTAAGTGGGGATGAGACAAGGTCAGAGGCTGAGGAAACCCTTCCATCTTCTTCCAGTGGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR TCA 90 bp | TCACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCAAAGGACAAGAGAGATaGTGGGATAGGCAGTCATTC | + |
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Preference number: 2 (lower is better) Translates to: SLTSWLLHPPSRCSVQSVKGQER*WDRQSF Trigger: GAATGACTGCCTATCCCATCATCTCTCTTGTCCTTT...GACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGCGGAGGAATGTAGAGGAAGTATTCCTTGGCCTCACTCCACACAACTCAAAACTGTAGGGTGGTGGTaGATCCAAGGAGGTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: PAEECRGSIPWPHSTQLKTVGWW*IQGGDP Trigger: TGGGTCACCTCCTTGGATCCACCACCACCCTACAGT...TTTGAGTTGTGTGGAGTGAGGCCAAGGAATACTTCCTCTACATTCCTCCGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143620.9 |
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| 3UTR-3UTR GCA 90 bp | GGTCCTCTCTGCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGATGGCTCAGAGTCTGTaGAGTTCAGTCTTCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: GPLCPCMVGRWLRVCAVQMAQSL*SSVFKL Trigger: GAGTTTGAAGACTGAACTGCACAGACTCTGAGCCAT...CTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGAATCCAGCGGAGGAATGTAGAGGAAGTATTCCTTGGCCTCACTCCACATGCATGGTTGGAAGATaGCTCAGAGTCTGTGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: QGNPAEECRGSIPWPHSTCMVGR*LRVCAV Trigger: AACTGCACAGACTCTGAGCCATCTTCCAACCATGCA...TGTGGAGTGAGGCCAAGGAATACTTCCTCTACATTCCTCCGCTGGATTCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | TCTATGCATTCACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCTTAGCAGCCAGCTATaGAAACGTAGTCCCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SMHSLTSWLLHPPSRCSVLSSQL*KRSPCV Trigger: AACACAGGGACTACGTTTCCATAGCTGGCTGCTAAG...CACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATGCATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAAGCAGGTCCCAGGACTAGAACAGGATCCTGAGAACTTTCCAGTTTCTCATTCACTCACATCTTaGCTGCTCCATCCTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PGKQVPGLEQDPENFPVSHSLTS*LLHPPS Trigger: GCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATG...AGAAACTGGAAAGTTCTCAGGATCCTGTTCTAGTCCTGGGACCTGCTTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR CAA 90 bp | GACAAGAGAGATGATGGGATAGGCAGTCATTCCAGGGTCCTGGGCTaGATCCAAGAGATGTGTGTAAGGAAGCTCAAAGGGTTGCATAGG | + |
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Preference number: 2 (lower is better) Translates to: DKRDDGIGSHSRVLG*IQEMCVRKLKGLHR Trigger: CCTATGCAACCCTTTGAGCTTCCTTACACACATCTCTTGGATCAAGCCCAGGACCCTGGAATGACTGCCTATCCCATCATCTCTCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143620.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCACCCAATCTTCTCCTAGAAGGCGGTTTTCTGGTTTGTATCTCCCTAAGGAGGACCCAGGAAGGTaGAGGTCTATGCATTCACTC | + |
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Preference number: 2 (lower is better) Translates to: LSTQSSPRRRFSGLYLPKEDPGR*RSMHSL Trigger: GAGTGAATGCATAGACCTTCACCTTCCTGGGTCCTC...CTTAGGGAGATACAAACCAGAAAACCGCCTTCTAGGAGAAGATTGGGTGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTCCACCCAATCTTCTCCTAGAAGGCGGTTTTCTGGTTTGTATCTCCCTAGAGGACCCAGGAAGGTaGAGGTCTATGCATTCACTC | + |
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Preference number: 2 (lower is better) Translates to: FSPPNLLLEGGFLVCISLEDPGR*RSMHSL Trigger: GAGTGAATGCATAGACCTTCACCTTCCTGGGTCCTC...TAGGGAGATACAAACCAGAAAACCGCCTTCTAGGAGAAGATTGGGTGGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR GCA 90 bp | ACCTCCTCCAACAGGGAAAAGCCCAGTTCTCAGAGCCCAAATCTAGCCAGAATCATGGCTCAGAGTCTGTaGAGTTCAGTCTTCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: TSSNREKPSSQSPNLARIMAQSL*SSVFKL Trigger: GAGTTTGAAGACTGAACTGCACAGACTCTGAGCCAT...GATTCTGGCTAGATTTGGGCTCTGAGAACTGGGCTTTTCCCTGTTGGAGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTCCACCCAATCTTCTCCTAGAAGGCGGTTTTCTGGTTTGTATCTCCCTACTCTCTGCCCATGCATaGTTGGAAGATGGCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FSPPNLLLEGGFLVCISLLSAHA*LEDGSE Trigger: CTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAG...TAGGGAGATACAAACCAGAAAACCGCCTTCTAGGAGAAGATTGGGTGGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTCCACCCAATCTTCTCCTAGAAGGCGGTTTTCTGGTTTGTATCTCCCTACATTCACTCACATCTTaGCTGCTCCATCCTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: FSPPNLLLEGGFLVCISLHSLTS*LLHPPS Trigger: GCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATG...TAGGGAGATACAAACCAGAAAACCGCCTTCTAGGAGAAGATTGGGTGGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCCCTCAGCCACAGGACAAAACCTTCTTCCCTTTAGGAGTTAACTTTGGGAAAGGACAAGAGAGATaGTGGGATAGGCAGTCATTC | + |
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Preference number: 2 (lower is better) Translates to: SAPQPQDKTFFPLGVNFGKGQER*WDRQSF Trigger: GAATGACTGCCTATCCCATCATCTCTCTTGTCCTTT...CCCAAAGTTAACTCCTAAAGGGAAGAAGGTTTTGTCCTGTGGCTGAGGGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGTCTTCAAACTAAAGGACAAGAGAGATaGTGGGATAGGCAGTCATTC | + |
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Preference number: 2 (lower is better) Translates to: AHAWLEDGSESVQFSLQTKGQER*WDRQSF Trigger: GAATGACTGCCTATCCCATCATCTCTCTTGTCCTTT...AGTTTGAAGACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | CCATGCATGGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGTCTTCAAACTCTCTTAGCAGCCAGCTATaGAAACGTAGTCCCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PCMVGRWLRVCAVQSSNSLSSQL*KRSPCV Trigger: AACACAGGGACTACGTTTCCATAGCTGGCTGCTAAG...AGAGTTTGAAGACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCACCCAATCTTCTCCTAGAAGGCGGTTTTCTGGTTTGTATCTCCCTAAGTTGAGCTGTAGAGTGTaGAACACAGGCTCACCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LSTQSSPRRRFSGLYLPKLSCRV*NTGSPE Trigger: TTCTGGTGAGCCTGTGTTCCACACTCTACAGCTCAA...CTTAGGGAGATACAAACCAGAAAACCGCCTTCTAGGAGAAGATTGGGTGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR CAA 90 bp | GGCTTTCTCTCCACCCAATCTTCTCCTAGAAGGCGGTTTTCTGGTTaGTATCTCCCTAAGTGTCCCATGCTTAATCAAGTTCTGTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GFLSTQSSPRRRFSG*YLPKCPMLNQVLSG Trigger: ACCAGACAGAACTTGATTAAGCATGGGACACTTAGGGAGATACAAACCAGAAAACCGCCTTCTAGGAGAAGATTGGGTGGAGAGAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTATTCCTTGGCCTCACTCCACACAACTCAAACCACACCTGCTTCTCCAGGACTAGAACAGGATCCTaGGAACTTTCCAGTTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: EVFLGLTPHNSNHTCFSRTRTGS*ELSSFF Trigger: AAAGAAACTGGAAAGTTCTCAGGATCCTGTTCTAGT...CCTGGAGAAGCAGGTGTGGTTTGAGTTGTGTGGAGTGAGGCCAAGGAATACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTAGAGTGTGGAACACAGGCTCACCAGAAGGAAGAGGAAGGTGGGGTAGACGCATTCACTCACATCTaGGCTGCTCCATCCTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AVECGTQAHQKEEEGGVDAFTHI*AAPSSQ Trigger: CTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATGC...GTCTACCCCACCTTCCTCTTCCTTCTGGTGAGCCTGTGTTCCACACTCTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR GCA 72 bp | CATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTaGAGTCAGTCACCACTGGAAGAAGATGGAAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLGCSILPAGAQ*SQSPLEEDGRV Trigger: AACCCTTCCATCTTCTTCCAGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR GCA 72 bp | TGTCTGTCTGAGGGGAAACATTGGCCTTCATCCCTCTaGAGCACACACAGTAAACAGAGGGGCAAGGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLSEGKHWPSSL*STHSKQRGKVP Trigger: TGGCACCTTGCCCCTCTGTTTACTGTGTGTGCTGCAGAGGGATGAAGGCCAATGTTTCCCCTCAGACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
||
| 3UTR CCA 72 bp | CTACAGAGGGACAGTGAGGTCCTCTCTGCCCATGCATaGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LQRDSEVLSAHA*LEDGSESVQFS Trigger: ACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACCTCACTGTCCCTCTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR CCA 72 bp | TGTGGGAGGTGTCATCTGAACAACCTGACTGTAGGGTaGTGGTGGATCCAAGGAGGTGACCCAAATGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CGRCHLNNLTVG*WWIQGGDPNAL Trigger: GAGAGCATTTGGGTCACCTCCTTGGATCCACCACCACCCTACAGTCAGGTTGTTCAGATGACACCTCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143620.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCTCTCTGCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGCCTGTGTTTTCTGCATaGCTACAGAGGGACAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GPLCPCMVGRWLRVCAVQPVFSA*LQRDSE Trigger: CTCACTGTCCCTCTGTAGCAATGCAGAAAACACAGG...CTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR TCA 72 bp | AGTCCCTGTGTTTTCTGCATTGCTACAGAGGGACAGTaGGGTCCTCTCTGCCCATGCATGGTTGGAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SPCVFCIATEGQ*GPLCPCMVGRW Trigger: CCATCTTCCAACCATGCATGGGCAGAGAGGACCTCACTGTCCCTCTGTAGCAATGCAGAAAACACAGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR CCA 72 bp | GAGTATTTCTTGGGGATCCTGAATTTGAAGCTAGCCTaGTCTACAGAGGGAGTCCAGGACAGCCACACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EYFLGILNLKLA*STEGVQDSHTC Trigger: GCAGGTGTGGCTGTCCTGGACTCCCTCTGTAGACCAGGCTAGCTTCAAATTCAGGATCCCCAAGAAATACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCAAACTCTTCCAGGCACAGAAGTGCTGCTGTAGGATGGCAGAGCAAGCTGTCTGCCCATGCATGGTaGGAAGATGGCTCAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSNSSRHRSAAVGWQSKLSAHAW*EDGSES Trigger: AGACTCTGAGCCATCTTCCAACCATGCATGGGCAGA...CAGCTTGCTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAAGAGTTTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGGAATCCAGCGGAGGAATGTAGAGGAAGTATTCCTTGGCCTCACTCCACACCTGTGTTTTCTGCATaGCTACAGAGGGACAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGNPAEECRGSIPWPHSTPVFSA*LQRDSE Trigger: CTCACTGTCCCTCTGTAGCAATGCAGAAAACACAGG...TGTGGAGTGAGGCCAAGGAATACTTCCTCTACATTCCTCCGCTGGATTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAGCGGAGGAATGTAGAGGAAGTATTCCTTGGCCTCACTCCACACAACTCATCTGCCCATGCATGGTaGGAAGATGGCTCAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IQRRNVEEVFLGLTPHNSSAHAW*EDGSES Trigger: AGACTCTGAGCCATCTTCCAACCATGCATGGGCAGA...TGAGTTGTGTGGAGTGAGGCCAAGGAATACTTCCTCTACATTCCTCCGCTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCCTCCAACAGGGAAAAGCCCAGTTCTCAGAGCCCAAATCTAGCCAGAATCAGGCGGTTTTCTGGTTaGTATCTCCCTAAGTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TSSNREKPSSQSPNLARIRRFSG*YLPKCP Trigger: GGGACACTTAGGGAGATACAAACCAGAAAACCGCCT...GATTCTGGCTAGATTTGGGCTCTGAGAACTGGGCTTTTCCCTGTTGGAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
||
| 3UTR TCA 72 bp | CCCAGGAAAGCAGGTCCCAGGACTAGAACAGGATCCTaGGAACTTTCCAGTTTCTTTATTCAGTGCCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: PRKAGPRTRTGS*ELSSFFIQCPR Trigger: TCGGGGGCACTGAATAAAGAAACTGGAAAGTTCTCAGGATCCTGTTCTAGTCCTGGGACCTGCTTTCCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR GCA 72 bp | TGCAGTTCAGTCTTCAAACTCTTCCAGGCACAGAAGTaGTGCTGTAGGATGGCAGAGCAAGCTGTCCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: CSSVFKLFQAQK*CCRMAEQAVQT Trigger: TGTCTGGACAGCTTGCTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAAGAGTTTGAAGACTGAACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR GCA 72 bp | CTGCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTaGAGTTCAGTCTTCAAACTCTTCCAGGCACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPMHGWKMAQSL*SSVFKLFQAQK Trigger: CTTCTGTGCCTGGAAGAGTTTGAAGACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR GCA 72 bp | AGTTCAGTCTTCAAACTCTTCCAGGCACAGAAGTGCTaGTGTAGGATGGCAGAGCAAGCTGTCCAGACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSVFKLFQAQKC*CRMAEQAVQTR Trigger: TCTTGTCTGGACAGCTTGCTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAAGAGTTTGAAGACTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR-3UTR CAA 90 bp | GAATGTAGAGGAAGTATTCCTTGGCCTCACTCCACACAACTCAAACCACACCTGAGGCGGTTTTCTGGTTaGTATCTCCCTAAGTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ECRGSIPWPHSTQLKPHLRRFSG*YLPKCP Trigger: GGGACACTTAGGGAGATACAAACCAGAAAACCGCCT...CAGGTGTGGTTTGAGTTGTGTGGAGTGAGGCCAAGGAATACTTCCTCTACATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| CDS-3UTR TCA 90 bp | GCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCACCACTGGAAGAAGATGGGCCAAAGGTCAAGGTaGGTGTGCCCCAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APSSQQVLSAVSHHWKKMGQRSR*VCPRPR Trigger: CCTGGGTCTGGGGCACACTCACCTTGACCTTTGGCC...CATCTTCTTCCAGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| CDS-3UTR TCA 90 bp | CCCAAATCTAGCCAGAATCCCTGTCCTGTCCTCTTCTGTGGTGGCACAGGGATGGGCCAAAGGTCAAGGTaGGTGTGCCCCAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKSSQNPCPVLFCGGTGMGQRSR*VCPRPR Trigger: CCTGGGTCTGGGGCACACTCACCTTGACCTTTGGCC...CATCCCTGTGCCACCACAGAAGAGGACAGGACAGGGATTCTGGCTAGATTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGTTTTCTGCATTGCTACAGAGGGACAGTGAGGTCCTCTCTGCCCATGCATCAGGGCCCTCAGGCCTaGGGCTGTAGGGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCFLHCYRGTVRSSLPMHQGPQA*GCREEV Trigger: CACCTCCTCCCTACAGCCTCAGGCCTGAGGGCCCTG...ATGCATGGGCAGAGAGGACCTCACTGTCCCTCTGTAGCAATGCAGAAAACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100554.8 ENSMUST00000162809.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGTCTTCAAACAGGGCCCTCAGGCCTaGGGCTGTAGGGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPMHGWKMAQSLCSSVFKQGPQA*GCREEV Trigger: CACCTCCTCCCTACAGCCTCAGGCCTGAGGGCCCTG...TTTGAAGACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100554.8 ENSMUST00000162809.3 |
||
| CDS-3UTR TCA 90 bp | CACCTGCTTCTCCAGGCTTTCTCTCCACCCAATCTTCTCCTAGAAGGCGGTTTTGGCCAAAGGTCAAGGTaGGTGTGCCCCAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLLQAFSPPNLLLEGGFGQRSR*VCPRPR Trigger: CCTGGGTCTGGGGCACACTCACCTTGACCTTTGGCC...AAAACCGCCTTCTAGGAGAAGATTGGGTGGAGAGAAAGCCTGGAGAAGCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| CDS-3UTR CCA 90 bp | TCACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCACTGTAGGGTGGTGGTaGATCCAAGGAGGTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTSWLLHPPSRCSVQSVTVGWW*IQGGDP Trigger: TGGGTCACCTCCTTGGATCCACCACCACCCTACAGT...GACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162809.3 |
||
| 3UTR CAA 72 bp | CCCAGGAAGGTGAAGGTCTATGCATTCACTCACATCTaGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRKVKVYAFTHI*AAPSSQQVLSA Trigger: TGCACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATGCATAGACCTTCACCTTCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR CAA 72 bp | CAGAGGGACAGTGAGGTCCTCTCTGCCCATGCATGGTaGGAAGATGGCTCAGAGTCTGTGCAGTTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRDSEVLSAHAW*EDGSESVQFSL Trigger: AAGACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACCTCACTGTCCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR CAA 72 bp | TTGATCCAAGAGATGTGTGTAAGGAAGCTCAAAGGGTaGCATAGGCACGCCCTCTCATCTGGCCAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQEMCVRKLKG*HRHALSSGQQG Trigger: GCCCTGCTGGCCAGATGAGAGGGCGTGCCTATGCAACCCTTTGAGCTTCCTTACACACATCTCTTGGATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143620.9 |
||
| CDS-3UTR GCA 90 bp | TGGAACACAGGCTCACCAGAAGGAAGAGGAAGGTGGGGTAGACCTCCCCTCTCCGGGAAAAATGATGCATaGCAGGATGACCAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: WNTGSPEGRGRWGRPPLSGKNDA*QDDQEP Trigger: AGGTTCTTGGTCATCCTGGCATGCATCATTTTTCCC...GGAGAGGGGAGGTCTACCCCACCTTCCTCTTCCTTCTGGTGAGCCTGTGTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100554.8 ENSMUST00000162809.3 |
||
| CDS-3UTR CCA 90 bp | GGGACAGTGAGGTCCTCTCTGCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTTGAAGCTTACTCCTTaGAGACTGGAAAGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTVRSSLPMHGWKMAQSLLKLTP*RLESRP Trigger: TGGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAA...CAGACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACCTCACTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| CDS-3UTR GCA 90 bp | TGCTCCATCCTCCCAGCAGGTGCTCAGTGCAGTCAGTCACCACTGGAAGAAGATCGTGCTGTAATTCAGTaGAGTTGGGACAGAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSILPAGAQCSQSPLEEDRAVIQ*SWDRRD Trigger: GTCTCTTCTGTCCCAACTGCACTGAATTACAGCACG...ATCTTCTTCCAGTGGTGACTGACTGCACTGAGCACCTGCTGGGAGGATGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162809.3 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCTCTGCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGGGGAAAAATGATGCATaGCAGGATGACCAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLCPCMVGRWLRVCAVQGKNDA*QDDQEP Trigger: AGGTTCTTGGTCATCCTGGCATGCATCATTTTTCCC...CTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100554.8 ENSMUST00000162809.3 |
||
| CDS-3UTR CCA 90 bp | GTCTATGCATTCACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTTTGAAGCTTACTCCTTaGAGACTGGAAAGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VYAFTHILAAPSSQQVLSLKLTP*RLESRP Trigger: TGGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAA...ACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATGCATAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR CAA 72 bp | TGGCACAGGGATGAGTATTTCTTGGGGATCCTGAATTaGAAGCTAGCCTGGTCTACAGAGGGAGTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WHRDEYFLGILN*KLAWSTEGVQD Trigger: GTCCTGGACTCCCTCTGTAGACCAGGCTAGCTTCAAATTCAGGATCCCCAAGAAATACTCATCCCTGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
||
| 3UTR CAA 72 bp | GATGATGGGATAGGCAGTCATTCCAGGGTCCTGGGCTaGATCCAAGAGATGTGTGTAAGGAAGCTCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DDGIGSHSRVLG*IQEMCVRKLKG Trigger: CCCTTTGAGCTTCCTTACACACATCTCTTGGATCAAGCCCAGGACCCTGGAATGACTGCCTATCCCATCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143620.9 |
||
| CDS-3UTR TCA 90 bp | GTCTATGCATTCACTCACATCTTGGCTGCTCCATCCTCCCAGCAGGTGCTCAGTTGTTTGCAGTCTCATTaGAGCTTACTCCTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VYAFTHILAAPSSQQVLSCLQSH*SLLLGD Trigger: GTCTCCAAGGAGTAAGCTTCAATGAGACTGCAAACA...ACTGAGCACCTGCTGGGAGGATGGAGCAGCCAAGATGTGAGTGAATGCATAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCAGGCACAGAAGTGCTGCTGTAGGATGGCAGAGCAAGCTGTCCAGACAGATGTCACATGTGTTTaGAGTCTCATTGAAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LFQAQKCCCRMAEQAVQTDVTCV*SLIEAY Trigger: GTAAGCTTCAATGAGACTGCAAACACATGTGACATC...TGTCTGGACAGCTTGCTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| 3UTR CAA 72 bp | TGTCCTCTTCTGTGGTGGCACAGGGATGAGTATTTCTaGGGGATCCTGAATTTGAAGCTAGCCTGGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: CPLLWWHRDEYF*GILNLKLAWST Trigger: TGTAGACCAGGCTAGCTTCAAATTCAGGATCCCCAAGAAATACTCATCCCTGTGCCACCACAGAAGAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
||
| CDS-3UTR TCA 90 bp | GCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGTCTTCAAACTTGTTTGCAGTCTCATTaGAGCTTACTCCTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AHAWLEDGSESVQFSLQTCLQSH*SLLLGD Trigger: GTCTCCAAGGAGTAAGCTTCAATGAGACTGCAAACA...AGTTTGAAGACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| CDS-3UTR CCA 90 bp | GAATGTAGAGGAAGTATTCCTTGGCCTCACTCCACACAACTCAAACCACACCTGTTGAAGCTTACTCCTTaGAGACTGGAAAGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ECRGSIPWPHSTQLKPHLLKLTP*RLESRP Trigger: TGGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAA...CAGGTGTGGTTTGAGTTGTGTGGAGTGAGGCCAAGGAATACTTCCTCTACATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| CDS-3UTR GCA 90 bp | GCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGTCTTCAAACTGATGTCACATGTGTTTaGAGTCTCATTGAAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AHAWLEDGSESVQFSLQTDVTCV*SLIEAY Trigger: GTAAGCTTCAATGAGACTGCAAACACATGTGACATC...AGTTTGAAGACTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| CDS-3UTR GCA 90 bp | GAATGTAGAGGAAGTATTCCTTGGCCTCACTCCACACAACTCAAACCACACCTGGATGTCACATGTGTTTaGAGTCTCATTGAAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ECRGSIPWPHSTQLKPHLDVTCV*SLIEAY Trigger: GTAAGCTTCAATGAGACTGCAAACACATGTGACATC...CAGGTGTGGTTTGAGTTGTGTGGAGTGAGGCCAAGGAATACTTCCTCTACATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCCACCCAATCTTCTCCTAGAAGGCGGTTTTCTGGTTTGTATCTCCCTAGTAATTCAGTGCAGTTaGGACAGAAGAGACTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: FSPPNLLLEGGFLVCISLVIQCS*DRRDSL Trigger: TAGTGAGTCTCTTCTGTCCCAACTGCACTGAATTAC...TAGGGAGATACAAACCAGAAAACCGCCTTCTAGGAGAAGATTGGGTGGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162809.3 |
||
| 3UTR CAA 72 bp | TCCACCCAATCTTCTCCTAGAAGGCGGTTTTCTGGTTaGTATCTCCCTAAGTGTCCCATGCTTAATCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: STQSSPRRRFSG*YLPKCPMLNQV Trigger: AACTTGATTAAGCATGGGACACTTAGGGAGATACAAACCAGAAAACCGCCTTCTAGGAGAAGATTGGGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS-3UTR CAA 90 bp | GGTCCTCTCTGCCCATGCATGGTTGGAAGATGGCTCAGAGTCTGTGCAGTTCAGATTGAAGCTTACTCCTaGGAGACTGGAAAGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GPLCPCMVGRWLRVCAVQIEAYS*ETGKQA Trigger: GGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAAT...CTGAACTGCACAGACTCTGAGCCATCTTCCAACCATGCATGGGCAGAGAGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS-3UTR CAA 90 bp | TCCAAGCTCCAAGCTGTCCTCAGCCCCTCAGCCACAGGACAAAACCTTCTTCCCGTGTTTGCAGTCTCATaGAAGCTTACTCCTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SKLQAVLSPSATGQNLLPVFAVS*KLTPWR Trigger: TCTCCAAGGAGTAAGCTTCAATGAGACTGCAAACAC...GGGAAGAAGGTTTTGTCCTGTGGCTGAGGGGCTGAGGACAGCTTGGAGCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
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| CDS-3UTR CAA 90 bp | TCAGCCCCTCAGCCACAGGACAAAACCTTCTTCCCTTTAGGAGTTAACTTTGGGATTGAAGCTTACTCCTaGGAGACTGGAAAGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SAPQPQDKTFFPLGVNFGIEAYS*ETGKQA Trigger: GGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAAT...CCCAAAGTTAACTCCTAAAGGGAAGAAGGTTTTGTCCTGTGGCTGAGGGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100554.8 |
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| CDS-3UTR CAA 90 bp | CTCTCCACCCAATCTTCTCCTAGAAGGCGGTTTTCTGGTTTGTATCTCCCTAAGATTGAAGCTTACTCCTaGGAGACTGGAAAGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LSTQSSPRRRFSGLYLPKIEAYS*ETGKQA Trigger: GGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAAT...CTTAGGGAGATACAAACCAGAAAACCGCCTTCTAGGAGAAGATTGGGTGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS-3UTR CAA 90 bp | CAGTCTTCAAACTCTTCCAGGCACAGAAGTGCTGCTGTAGGATGGCAGAGCAAGGTGTTTGCAGTCTCATaGAAGCTTACTCCTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: QSSNSSRHRSAAVGWQSKVFAVS*KLTPWR Trigger: TCTCCAAGGAGTAAGCTTCAATGAGACTGCAAACAC...CTTGCTCTGCCATCCTACAGCAGCACTTCTGTGCCTGGAAGAGTTTGAAGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS TCA 90 bp | ATCCTTTGGGGCAGTTTAAGATGTCACATGTGTTTGCAGTCTCATTaGAGCTTACTCCTTGGAGACTGGAAAGCAGGCCAAAGGTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: ILWGSLRCHMCLQSH*SLLLGDWKAGQRSR Trigger: CCTTGACCTTTGGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAATGAGACTGCAAACACATGTGACATCTTAAACTGCCCCAAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS CAA 72 bp | TCCGGGCAGCATTCCTTGACACAGCATGTGAATCCTTaGGGGCAGTTTAAGATGTCACATGTGTTTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SGQHSLTQHVNP*GQFKMSHVFAV Trigger: GACTGCAAACACATGTGACATCTTAAACTGCCCCAAAGGATTCACATGCTGTGTCAAGGAATGCTGCCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS CAA 72 bp | TCCACTCTTCTGACATCGTGCTGTAATTCAGTGCAGTaGGGACAGAAGAGACTCACTAGGGCACAGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: STLLTSCCNSVQ*GQKRLTRAQMN Trigger: GTTCATCTGTGCCCTAGTGAGTCTCTTCTGTCCCAACTGCACTGAATTACAGCACGATGTCAGAAGAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162809.3 |
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| CDS CCA 72 bp | TCACATGTGTTTGCAGTCTCATTGAAGCTTACTCCTTaGAGACTGGAAAGCAGGCCAAAGGTCAAGGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SHVFAVSLKLTP*RLESRPKVKVS Trigger: ACTCACCTTGACCTTTGGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAATGAGACTGCAAACACATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS CAA 72 bp | GGGCAGTTTAAGATGTCACATGTGTTTGCAGTCTCATaGAAGCTTACTCCTTGGAGACTGGAAAGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GQFKMSHVFAVS*KLTPWRLESRP Trigger: TGGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAATGAGACTGCAAACACATGTGACATCTTAAACTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS CAA 90 bp | AATCCTTTGGGGCAGTTTAAGATGTCACATGTGTTTGCAGTCTCATaGAAGCTTACTCCTTGGAGACTGGAAAGCAGGCCAAAGGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: NPLGQFKMSHVFAVS*KLTPWRLESRPKVK Trigger: CTTGACCTTTGGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAATGAGACTGCAAACACATGTGACATCTTAAACTGCCCCAAAGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS CAA 90 bp | ACCTTTCTTTCCGGGCAGCATTCCTTGACACAGCATGTGAATCCTTaGGGGCAGTTTAAGATGTCACATGTGTTTGCAGTCTCATTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TFLSGQHSLTQHVNP*GQFKMSHVFAVSLK Trigger: CTTCAATGAGACTGCAAACACATGTGACATCTTAAACTGCCCCAAAGGATTCACATGCTGTGTCAAGGAATGCTGCCCGGAAAGAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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| CDS TCA 72 bp | GGCAGTTTAAGATGTCACATGTGTTTGCAGTCTCATTaGAGCTTACTCCTTGGAGACTGGAAAGCAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: GSLRCHMCLQSH*SLLLGDWKAGQ Trigger: TTGGCCTGCTTTCCAGTCTCCAAGGAGTAAGCTTCAATGAGACTGCAAACACATGTGACATCTTAAACTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100554.8 ENSMUST00000143620.9 ENSMUST00000162809.3 |
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