Pregenerated sensors for TMEM9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026411Ensembl transcript IDs: ENSMUST00000063719.15, ENSMUST00000117950.2, ENSMUST00000165125.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACTGGTGGACCAGGAGCCGAGGAGAGGGGAACAGGCTTCCAGGTaGACTCTGGAGATGACTGTGGGCTCAGGGGCACCACAACAGTTC | + |
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Preference number: 1 (lower is better) Translates to: ALVDQEPRRGEQASR*TLEMTVGSGAPQQF Trigger: GAACTGTTGTGGTGCCCCTGAGCCCACAGTCATCTCCAGAGTCCACCTGGAAGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCACCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR CCA 90 bp | CAGCTGCTGAATATGCCGGCATGCATGGGCACTGCCATGCACTGGTaGACCAGGAGCCGAGGAGAGGGGAACAGGCTTCCAGGTGGACTC | + |
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Preference number: 1 (lower is better) Translates to: QLLNMPACMGTAMHW*TRSRGEGNRLPGGL Trigger: GAGTCCACCTGGAAGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCACCAGTGCATGGCAGTGCCCATGCATGCCGGCATATTCAGCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR GCA 90 bp | GGGAGTAAGGTGACAGCTGCTGAATATGCCGGCATGCATGGGCACTaGCATGCACTGGTGGACCAGGAGCCGAGGAGAGGGGAACAGGCT | + |
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Preference number: 1 (lower is better) Translates to: GSKVTAAEYAGMHGH*HALVDQEPRRGEQA Trigger: AGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCACCAGTGCATGGCAGTGCCCATGCATGCCGGCATATTCAGCAGCTGTCACCTTACTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR TCA 90 bp | CCTACTGTCCCCTTGCGGTGTGCACACACACAGGCAGTACCCTACTaGGCCTGTGCCTCTTTCCTCAGCAGGTGGCAAGAGTCCACCCTG | + |
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Preference number: 1 (lower is better) Translates to: PTVPLRCAHTQAVPY*ACASFLSRWQESTL Trigger: CAGGGTGGACTCTTGCCACCTGCTGAGGAAAGAGGCACAGGCTCAGTAGGGTACTGCCTGTGTGTGTGCACACCGCAAGGGGACAGTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR GCA 90 bp | CCCCTTGCGGTGTGCACACACACAGGCAGTACCCTACTGAGCCTGTaGCTCTTTCCTCAGCAGGTGGCAAGAGTCCACCCTGGCTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: PLAVCTHTGSTLLSL*LFPQQVARVHPGFA Trigger: TGCAAAGCCAGGGTGGACTCTTGCCACCTGCTGAGGAAAGAGGCACAGGCTCAGTAGGGTACTGCCTGTGTGTGTGCACACCGCAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR CCA 90 bp | GGACAGGAGCCATGGTACTCCGGTCCCCATTGGCCTTGTGTCATATaGTCCAACTTTATGGCTCAGCAGCTGCAGTCACAGGGGAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: GQEPWYSGPHWPCVI*SNFMAQQLQSQGRG Trigger: ACCTCTCCCCTGTGACTGCAGCTGCTGAGCCATAAAGTTGGACCATATGACACAAGGCCAATGGGGACCGGAGTACCATGGCTCCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR CCA 90 bp | TACAATGAAATTCAGGGACAAGAGACCATCCAAGGACAGGAGCCATaGTACTCCGGTCCCCATTGGCCTTGTGTCATATGGTCCAACTTT | + |
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Preference number: 1 (lower is better) Translates to: YNEIQGQETIQGQEP*YSGPHWPCVIWSNF Trigger: AAAGTTGGACCATATGACACAAGGCCAATGGGGACCGGAGTACCATGGCTCCTGTCCTTGGATGGTCTCTTGTCCCTGAATTTCATTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR-3UTR CCA 90 bp | GTGGACCAGGAGCCGAGGAGAGGGGAACAGGCTTCCAGGTGGACTCTGGAGATGTGGCACTGGAGGAACTaGGAATGGGGACCACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: VDQEPRRGEQASRWTLEMWHWRN*EWGPQH Trigger: ATGCTGTGGTCCCCATTCCCAGTTCCTCCAGTGCCA...CATCTCCAGAGTCCACCTGGAAGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCACTGCCATGCACTGGTGGACCAGGAGCCGAGGAGAGGGGAACAGGCTTCCGCCAAGCTAAAGTACTaGCACTGGAGGAACTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GHCHALVDQEPRRGEQASAKLKY*HWRNWE Trigger: TTCCCAGTTCCTCCAGTGCCAGTACTTTAGCTTGGC...GGAAGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCACCAGTGCATGGCAGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR-3UTR TCA 90 bp | AGACTGGGGCTAGGCCAAGCTAAAGTACTGGCACTGGAGGAACTGGGAATGGGGAACGCCATGGGCATTTaGAGGGAAGACCCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RLGLGQAKVLALEELGMGNAMGI*REDPGK Trigger: CTTCCCTGGGTCTTCCCTTCAAATGCCCATGGCGTT...CCCCATTCCCAGTTCCTCCAGTGCCAGTACTTTAGCTTGGCCTAGCCCCAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR-3UTR GCA 90 bp | ACACACACAGGCAGTACCCTACTGAGCCTGTGCCTCTTTCCTCAGCAGGTGGCAGGCTTTGCAAAGCGCTaGCTATGTCTGAATCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: THTGSTLLSLCLFPQQVAGFAKR*LCLNPP Trigger: AGGTGGATTCAGACATAGGCAGCGCTTTGCAAAGCC...TGCCACCTGCTGAGGAAAGAGGCACAGGCTCAGTAGGGTACTGCCTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR CAA 90 bp | TCGAGTACATTTCTAGAGAGGGAGAAGGATAAACGCCATGGGCATTaGAAGGGAAGACCCAGGGAAGACTGCAGTGAGCCCCAGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SSTFLEREKDKRHGH*KGRPREDCSEPQKL Trigger: CAGCTTCTGGGGCTCACTGCAGTCTTCCCTGGGTCTTCCCTTCAAATGCCCATGGCGTTTATCCTTCTCCCTCTCTAGAAATGTACTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR-3UTR CCA 90 bp | TGGGCACTGTGCAGTTTCAAAGGTGAAGTAAATGTGACACCTACTGTCCCCTTGTCTTTCCTCAGCAGGTaGCAAGAGTCCACCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: WALCSFKGEVNVTPTVPLSFLSR*QESTLA Trigger: AGCCAGGGTGGACTCTTGCCACCTGCTGAGGAAAGA...CAAGGGGACAGTAGGTGTCACATTTACTTCACCTTTGAAACTGCACAGTGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR-3UTR TCA 90 bp | AACCAGATCATTTGCAGAACACTTTCTCATGGCTCTCCATCTCCCTTGAGATCTTTTCCTCGCACCCACTaGGCTCTTGATGACACAGCT | + |
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Preference number: 2 (lower is better) Translates to: NQIICRTLSHGSPSPLRSFPRTH*ALDDTA Trigger: AGCTGTGTCATCAAGAGCTCAGTGGGTGCGAGGAAA...AGATCTCAAGGGAGATGGAGAGCCATGAGAAAGTGTTCTGCAAATGATCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR-3UTR TCA 90 bp | TGGGCACTGTGCAGTTTCAAAGGTGAAGTAAATGTGACACCTACTGTCCCCTTGATTTCTCTCCATGCATaGTACAATGAAATTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: WALCSFKGEVNVTPTVPLISLHA*YNEIQG Trigger: TCCCTGAATTTCATTGTATCATGCATGGAGAGAAAT...CAAGGGGACAGTAGGTGTCACATTTACTTCACCTTTGAAACTGCACAGTGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR CCA 72 bp | GACCAGGAGCCGAGGAGAGGGGAACAGGCTTCCAGGTaGACTCTGGAGATGACTGTGGGCTCAGGGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: DQEPRRGEQASR*TLEMTVGSGAP Trigger: TGGTGCCCCTGAGCCCACAGTCATCTCCAGAGTCCACCTGGAAGCCTGTTCCCCTCTCCTCGGCTCCTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR GCA 72 bp | CGCCATGGGCATTTGAAGGGAAGACCCAGGGAAGACTaGAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RHGHLKGRPRED*SEPQKLVAMAQ Trigger: CTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCTGGGTCTTCCCTTCAAATGCCCATGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR CCA 72 bp | AATATGCCGGCATGCATGGGCACTGCCATGCACTGGTaGACCAGGAGCCGAGGAGAGGGGAACAGGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: NMPACMGTAMHW*TRSRGEGNRLP Trigger: TGGAAGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCACCAGTGCATGGCAGTGCCCATGCATGCCGGCATATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR CCA 72 bp | CTGAATATGCCGGCATGCATGGGCACTGCCATGCACTaGTGGACCAGGAGCCGAGGAGAGGGGAACAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LNMPACMGTAMH*WTRSRGEGNRL Trigger: AAGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCACCAGTGCATGGCAGTGCCCATGCATGCCGGCATATTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR TCA 72 bp | TGGGCATTTGAAGGGAAGACCCAGGGAAGACTGCAGTaGGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: WAFEGKTQGRLQ*APEAGSHGPGL Trigger: GAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCTGGGTCTTCCCTTCAAATGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR TCA 72 bp | TGGGAGGCCTTACGGCCTCCTGGGATGGGAGTAAGGTaGCAGCTGCTGAATATGCCGGCATGCATGGGCACT | + |
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Preference number: 3 (lower is better) Translates to: WEALRPPGMGVR*QLLNMPACMGT Trigger: AGTGCCCATGCATGCCGGCATATTCAGCAGCTGTCACCTTACTCCCATCCCAGGAGGCCGTAAGGCCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR CCA 72 bp | GTGCCTCTTTCCTCAGCAGGTGGCAAGAGTCCACCCTaGCTTTGCAAAGCGCTGCCTATGTCTGAATCCACC | + |
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Preference number: 3 (lower is better) Translates to: VPLSSAGGKSPP*LCKALPMSEST Trigger: GGTGGATTCAGACATAGGCAGCGCTTTGCAAAGCCAGGGTGGACTCTTGCCACCTGCTGAGGAAAGAGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR CCA 72 bp | GTCCCCATTGGCCTTGTGTCATATGGTCCAACTTTATaGCTCAGCAGCTGCAGTCACAGGGGAGAGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: VPIGLVSYGPTL*LSSCSHRGEVG Trigger: TCCCACCTCTCCCCTGTGACTGCAGCTGCTGAGCCATAAAGTTGGACCATATGACACAAGGCCAATGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR GCA 72 bp | TTCCCCATATGGGACAGCGCACCTAACCAGATCATTTaGAGAACACTTTCTCATGGCTCTCCATCTCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: FPIWDSAPNQII*RTLSHGSPSPL Trigger: CAAGGGAGATGGAGAGCCATGAGAAAGTGTTCTGCAAATGATCTGGTTAGGTGCGCTGTCCCATATGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR GCA 72 bp | CAGGTGGCAAGAGTCCACCCTGGCTTTGCAAAGCGCTaGCTATGTCTGAATCCACCTAGGAAAATGTATTGT | + |
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Preference number: 3 (lower is better) Translates to: QVARVHPGFAKR*LCLNPPRKMYC Trigger: ACAATACATTTTCCTAGGTGGATTCAGACATAGGCAGCGCTTTGCAAAGCCAGGGTGGACTCTTGCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| 3UTR-3UTR CAA 90 bp | CAAACATTTCTCTCCATGCATGATACAATGAAATTCAGGGACAAGAGACCATCCGCACCCACTGAGCTCTaGATGACACAGCTTCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: QTFLSMHDTMKFRDKRPSAPTEL*MTQLRL Trigger: GAGACGAAGCTGTGTCATCAAGAGCTCAGTGGGTGC...GGATGGTCTCTTGTCCCTGAATTTCATTGTATCATGCATGGAGAGAAATGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR CCA 90 bp | GGGCACTGCCATGCACTGGTGGACCAGGAGCCGAGGAGAGGGGAACAGGCTTCCATCGTGGCCAGGCACTaGCATGGGCTCCACCACATG | + |
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Preference number: 4 (lower is better) Translates to: GHCHALVDQEPRRGEQASIVARH*HGLHHM Trigger: CATGTGGTGGAGCCCATGCCAGTGCCTGGCCACGAT...GGAAGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCACCAGTGCATGGCAGTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR TCA 90 bp | TGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAATCATGAGCTTCCACCGCTGCTaGGCGCCTTCCACCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CSEPQKLVAMAQVSDAIMSFHRC*APSTRS Trigger: GGAGCGGGTGGAAGGCGCTCAGCAGCGGTGGAAGCT...CATGATTGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATCCCGGGGTCCTCCAATaGACGCAGCGGCTGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: REDCSEPQKLVAMAQVSDPGVLQ*TQRLLP Trigger: TGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGG...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGTCTTCCGCTGCTCCTaGACCTGCAGCTTCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: REDCSEPQKLVAMAQVSDVFRCS*TCSFHR Trigger: GCGGTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGAC...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CCA 90 bp | TGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAATCATGCCCGGGGTCCTCCAATaGACGCAGCGGCTGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CSEPQKLVAMAQVSDAIMPGVLQ*TQRLLP Trigger: TGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGG...CATGATTGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR TCA 90 bp | GAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAGAGCTCTTGTTGGCTTaGGCTGGGGGCACCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: EDCSEPQKLVAMAQVSDAELLLA*AGGTSK Trigger: CTTGCTGGTGCCCCCAGCTCAAGCCAACAAGAGCTC...TGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR GCA 90 bp | GGGCACTGCCATGCACTGGTGGACCAGGAGCCGAGGAGAGGGGAACAGGCTTCCCCACATGCAGGCAGTTaGAGTCCTTCTGAGACACAT | + |
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Preference number: 4 (lower is better) Translates to: GHCHALVDQEPRRGEQASPHAGS*SPSETH Trigger: ATGTGTCTCAGAAGGACTGCAACTGCCTGCATGTGG...GGAAGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCACCAGTGCATGGCAGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR GCA 90 bp | TGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAATCATGGTCTTCCGCTGCTCCTaGACCTGCAGCTTCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: CSEPQKLVAMAQVSDAIMVFRCS*TCSFHR Trigger: GCGGTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGAC...CATGATTGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATCTTGTTGGCTTGAGCTaGGGGCACCAGCAAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: REDCSEPQKLVAMAQVSDLVGLS*GHQQAP Trigger: GGGTGCTTGCTGGTGCCCCCAGCTCAAGCCAACAAG...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR TCA 90 bp | AGACTGGGGCTAGGCCAAGCTAAAGTACTGGCACTGGAGGAACTGGGAATGGGGCATCTGGCTTCCGGATaGGCGGGTCCACCAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: RLGLGQAKVLALEELGMGHLASG*AGPPAS Trigger: TGATGCTGGTGGACCCGCTCATCCGGAAGCCAGATG...CCCCATTCCCAGTTCCTCCAGTGCCAGTACTTTAGCTTGGCCTAGCCCCAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR GCA 90 bp | AGGAGAGGGGAACAGGCTTCCAGGTGGACTCTGGAGATGACTGTGGGCTCAGGGCGGCTGTTGCCATGGTaGGAGCATCCTCATTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RRGEQASRWTLEMTVGSGRLLPW*EHPHSP Trigger: AGGAGAATGAGGATGCTCGCACCATGGCAACAGCCG...CCCTGAGCCCACAGTCATCTCCAGAGTCCACCTGGAAGCCTGTTCCCCTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR GCA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATAAGACCGTCTTCCGCTaGTCCTGCACCTGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: REDCSEPQKLVAMAQVSDKTVFR*SCTCSF Trigger: GAAGCTGCAGGTGCAGGAGCAGCGGAAGACGGTCTT...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR GCA 90 bp | GACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAATCAAGACCGTCTTCCGCTaGTCCTGCACCTGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: DCSEPQKLVAMAQVSDAIKTVFR*SCTCSF Trigger: GAAGCTGCAGGTGCAGGAGCAGCGGAAGACGGTCTT...GATTGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CCA 90 bp | ACACACACAGGCAGTACCCTACTGAGCCTGTGCCTCTTTCCTCAGCAGGTGGCACTTGTTGGCTTGAGCTaGGGGCACCAGCAAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: THTGSTLLSLCLFPQQVALVGLS*GHQQAP Trigger: GGGTGCTTGCTGGTGCCCCCAGCTCAAGCCAACAAG...TGCCACCTGCTGAGGAAAGAGGCACAGGCTCAGTAGGGTACTGCCTGTGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR CCA 90 bp | AGGAGAGGGGAACAGGCTTCCAGGTGGACTCTGGAGATGACTGTGGGCTCAGGGCAGCGGCTGTTGCCATaGTGCGAGCATCCTCATTCT | + |
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Preference number: 4 (lower is better) Translates to: RRGEQASRWTLEMTVGSGQRLLP*CEHPHS Trigger: AGAATGAGGATGCTCGCACCATGGCAACAGCCGCTG...CCCTGAGCCCACAGTCATCTCCAGAGTCCACCTGGAAGCCTGTTCCCCTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR TCA 90 bp | GTGGACCAGGAGCCGAGGAGAGGGGAACAGGCTTCCAGGTGGACTCTGGAGATGTGTAAATGTGCCCGCTaGTGTTTCTGTAAGGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: VDQEPRRGEQASRWTLEMCKCAR*CFCKAD Trigger: GTCCGCCTTACAGAAACATCAGCGGGCACATTTACA...CATCTCCAGAGTCCACCTGGAAGCCTGTTCCCCTCTCCTCGGCTCCTGGTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR GCA 90 bp | GAATATGCCGGCATGCATGGGCACTGCCATGCACTGGTGGACCAGGAGCCGAGGGCGGACAGATGCATTTaGACCGGATATCTTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: EYAGMHGHCHALVDQEPRADRCI*TGYLQS Trigger: GCTCTGAAGATATCCGGTGCAAATGCATCTGTCCGC...CCTCGGCTCCTGGTCCACCAGTGCATGGCAGTGCCCATGCATGCCGGCATATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR GCA 90 bp | GAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAATGGGCTCCACCACATaGAGGCAGTTGCAGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: EDCSEPQKLVAMAQVSDAMGSTT*RQLQSF Trigger: GAAGGACTGCAACTGCCTGCATGTGGTGGAGCCCAT...TGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATCGGCTGTTGCCATGGTaGGAGCATCCTCATTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: REDCSEPQKLVAMAQVSDRLLPW*EHPHSP Trigger: AGGAGAATGAGGATGCTCGCACCATGGCAACAGCCG...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATCTTCAGAGCTCTTGTTaGCTTGAGCTGGGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: REDCSEPQKLVAMAQVSDLQSSC*LELGAP Trigger: TGGTGCCCCCAGCTCAAGCCAACAAGAGCTCTGAAG...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CCA 90 bp | GAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCACAGCGGCTGTTGCCATaGTGCGAGCATCCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDCSEPQKLVAMAQVSDAQRLLP*CEHPHS Trigger: AGAATGAGGATGCTCGCACCATGGCAACAGCCGCTG...TGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR TCA 90 bp | AGGGATGAATTCCACCCAATCATGTGGCCACCTCAAATGTCTCTGTTCCCTTCTAGCTTCCACCGCTGCTaGGCGCCTTCCACCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RDEFHPIMWPPQMSLFPSSFHRC*APSTRS Trigger: GGAGCGGGTGGAAGGCGCTCAGCAGCGGTGGAAGCT...AGAAGGGAACAGAGACATTTGAGGTGGCCACATGATTGGGTGGAATTCATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR GCA 90 bp | TGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAATCATGATGGGCTCCACCACATaGAGGCAGTTGCAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSEPQKLVAMAQVSDAIMMGSTT*RQLQSF Trigger: GAAGGACTGCAACTGCCTGCATGTGGTGGAGCCCAT...CATGATTGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CCA 90 bp | AGACTGGGGCTAGGCCAAGCTAAAGTACTGGCACTGGAGGAACTGGGAATGGGGCTTCAGAGCTCTTGTTaGCTTGAGCTGGGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RLGLGQAKVLALEELGMGLQSSC*LELGAP Trigger: TGGTGCCCCCAGCTCAAGCCAACAAGAGCTCTGAAG...CCCCATTCCCAGTTCCTCCAGTGCCAGTACTTTAGCTTGGCCTAGCCCCAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR TCA 90 bp | GACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAATCTGTAAATGTGCCCGCTaGTGTTTCTGTAAGGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DCSEPQKLVAMAQVSDAICKCAR*CFCKAD Trigger: GTCCGCCTTACAGAAACATCAGCGGGCACATTTACA...GATTGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCGGACAGATGCATTTaGACCGGATATCTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: REDCSEPQKLVAMAQVSDADRCI*TGYLQS Trigger: GCTCTGAAGATATCCGGTGCAAATGCATCTGTCCGC...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATTGTAAGGCGGACAGATaGATTTGCACCGGATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: REDCSEPQKLVAMAQVSDCKADR*ICTGYL Trigger: AAGATATCCGGTGCAAATGCATCTGTCCGCCTTACA...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR TCA 90 bp | CAAACATTTCTCTCCATGCATGATACAATGAAATTCAGGGACAAGAGACCATCCGAGCTCTTGTTGGCTTaGGCTGGGGGCACCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTFLSMHDTMKFRDKRPSELLLA*AGGTSK Trigger: CTTGCTGGTGCCCCCAGCTCAAGCCAACAAGAGCTC...GGATGGTCTCTTGTCCCTGAATTTCATTGTATCATGCATGGAGAGAAATGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR GCA 90 bp | AGGGATGAATTCCACCCAATCATGTGGCCACCTCAAATGTCTCTGTTCCCTTCTTGTAAGGCGGACAGATaGATTTGCACCGGATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDEFHPIMWPPQMSLFPSCKADR*ICTGYL Trigger: AAGATATCCGGTGCAAATGCATCTGTCCGCCTTACA...AGAAGGGAACAGAGACATTTGAGGTGGCCACATGATTGGGTGGAATTCATCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS GCA 90 bp | CTTCCACCGCTGCTGAGCGCCTTCCACCCGCTCCAGGACAGTGTTTaGCCGGGGTCCTCCAATGGACGCAGCGGCTGTTGCCATGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPPLLSAFHPLQDSV*PGSSNGRSGCCHGA Trigger: CGCACCATGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGGCAAACACTGTCCTGGAGCGGGTGGAAGGCGCTCAGCAGCGGTGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS CCA 90 bp | CGCCTTCCACCCGCTCCAGGACAGTGTTTGCCCGGGGTCCTCCAATaGACGCAGCGGCTGTTGCCATGGTGCGAGCATCCTCATTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLPPAPGQCLPGVLQ*TQRLLPWCEHPHSP Trigger: AGGAGAATGAGGATGCTCGCACCATGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGGCAAACACTGTCCTGGAGCGGGTGGAAGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS-3UTR CAA 90 bp | GAATATGCCGGCATGCATGGGCACTGCCATGCACTGGTGGACCAGGAGCCGAGGAGAGCTCTTGTTGGCTaGAGCTGGGGGCACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EYAGMHGHCHALVDQEPRRALVG*SWGHQQ Trigger: TTGCTGGTGCCCCCAGCTCAAGCCAACAAGAGCTCT...CCTCGGCTCCTGGTCCACCAGTGCATGGCAGTGCCCATGCATGCCGGCATATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS-3UTR CAA 90 bp | GAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCATGGACGCAGCGGCTGTaGCCATGGTGCGAGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: EDCSEPQKLVAMAQVSDAWTQRL*PWCEHP Trigger: AGGATGCTCGCACCATGGCAACAGCCGCTGCGTCCA...TGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS CCA 90 bp | CGCAGAGCAGGCAGTAGGCTTCCACATCGTGGCCAGGCACTGGCATaGGCTCCACCACATGCAGGCAGTTGCAGTCCTTCTGAGACACAT | + |
|
Preference number: 5 (lower is better) Translates to: RRAGSRLPHRGQALA*APPHAGSCSPSETH Trigger: ATGTGTCTCAGAAGGACTGCAACTGCCTGCATGTGGTGGAGCCCATGCCAGTGCCTGGCCACGATGTGGAAGCCTACTGCCTGCTCTGCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAATCATGTGGACGCAGCGGCTGTaGCCATGGTGCGAGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSEPQKLVAMAQVSDAIMWTQRL*PWCEHP Trigger: AGGATGCTCGCACCATGGCAACAGCCGCTGCGTCCA...CATGATTGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATAGAGCTCTTGTTGGCTaGAGCTGGGGGCACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: REDCSEPQKLVAMAQVSDRALVG*SWGHQQ Trigger: TTGCTGGTGCCCCCAGCTCAAGCCAACAAGAGCTCT...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGGCGGACAGATGCATTaGCACCGGATATCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: REDCSEPQKLVAMAQVSDGGQMH*HRISSE Trigger: CTCTGAAGATATCCGGTGCAAATGCATCTGTCCGCC...ATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS-3UTR CAA 90 bp | GAAGACTGCAGTGAGCCCCAGAAGCTGGTAGCCATGGCCCAGGTCTCTGATGCAGGCGGACAGATGCATTaGCACCGGATATCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EDCSEPQKLVAMAQVSDAGGQMH*HRISSE Trigger: CTCTGAAGATATCCGGTGCAAATGCATCTGTCCGCC...TGCATCAGAGACCTGGGCCATGGCTACCAGCTTCTGGGGCTCACTGCAGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 |
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| CDS CCA 90 bp | ATCCTCATTCTCCTCTTCATTGTGCAGCTGCTCAGTATAGGCATCTaGCTTCCGGATGAGCGGGTCCACCAGCATCAGGAAGGCCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: ILILLFIVQLLSIGI*LPDERVHQHQEGHV Trigger: TACATGGCCTTCCTGATGCTGGTGGACCCGCTCATCCGGAAGCCAGATGCCTATACTGAGCAGCTGCACAATGAAGAGGAGAATGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS TCA 90 bp | AGTTGCAGTCCTTCTGAGACACATTCTGGTTGTAAATGTGCCCGCTaGTGTTTCTGTAAGGCGGACAGATGCATTTGCACCGGATATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSPSETHSGCKCAR*CFCKADRCICTGYL Trigger: AAGATATCCGGTGCAAATGCATCTGTCCGCCTTACAGAAACATCAGCGGGCACATTTACAACCAGAATGTGTCTCAGAAGGACTGCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS-3UTR CAA 90 bp | AACCAGATCATTTGCAGAACACTTTCTCATGGCTCTCCATCTCCCTTGAGATCTATGACAATAATGACCTaGATGGTTGTGGTGCTACGC | + |
|
Preference number: 5 (lower is better) Translates to: NQIICRTLSHGSPSPLRSMTIMT*MVVVLR Trigger: GCGTAGCACCACAACCATCAAGGTCATTATTGTCAT...AGATCTCAAGGGAGATGGAGAGCCATGAGAAAGTGTTCTGCAAATGATCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063719.15 |
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| CDS CAA 90 bp | GCTTCCACCGCTGCTGAGCGCCTTCCACCCGCTCCAGGACAGTGTTaGCCCGGGGTCCTCCAATGGACGCAGCGGCTGTTGCCATGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASTAAERLPPAPGQC*PGVLQWTQRLLPWC Trigger: GCACCATGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGGCAAACACTGTCCTGGAGCGGGTGGAAGGCGCTCAGCAGCGGTGGAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS GCA 72 bp | CTGCTGAGCGCCTTCCACCCGCTCCAGGACAGTGTTTaGCCGGGGTCCTCCAATGGACGCAGCGGCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLSAFHPLQDSV*PGSSNGRSGCC Trigger: GCAACAGCCGCTGCGTCCATTGGAGGACCCCGGGCAAACACTGTCCTGGAGCGGGTGGAAGGCGCTCAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS CAA 72 bp | GCTGCTGAGCGCCTTCCACCCGCTCCAGGACAGTGTTaGCCCGGGGTCCTCCAATGGACGCAGCGGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AAERLPPAPGQC*PGVLQWTQRLL Trigger: CAACAGCCGCTGCGTCCATTGGAGGACCCCGGGCAAACACTGTCCTGGAGCGGGTGGAAGGCGCTCAGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS CCA 72 bp | CCCGCTCCAGGACAGTGTTTGCCCGGGGTCCTCCAATaGACGCAGCGGCTGTTGCCATGGTGCGAGCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: PAPGQCLPGVLQ*TQRLLPWCEHP Trigger: AGGATGCTCGCACCATGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGGCAAACACTGTCCTGGAGCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS CCA 72 bp | GCACCGGATATCTTCAGAGCTCTTGTTGGCTTGAGCTaGGGGCACCAGCAAGCACCCCACCACAGCCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: APDIFRALVGLS*GHQQAPHHSHQ Trigger: TTGGTGGCTGTGGTGGGGTGCTTGCTGGTGCCCCCAGCTCAAGCCAACAAGAGCTCTGAAGATATCCGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS CCA 72 bp | CCCGGGGTCCTCCAATGGACGCAGCGGCTGTTGCCATaGTGCGAGCATCCTCATTCTCCTCTTCATTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGVLQWTQRLLP*CEHPHSPLHCA Trigger: TGCACAATGAAGAGGAGAATGAGGATGCTCGCACCATGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS CAA 90 bp | CCAGGACAGTGTTTGCCCGGGGTCCTCCAATGGACGCAGCGGCTGTaGCCATGGTGCGAGCATCCTCATTCTCCTCTTCATTGTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGQCLPGVLQWTQRL*PWCEHPHSPLHCAA Trigger: AGCTGCACAATGAAGAGGAGAATGAGGATGCTCGCACCATGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGGCAAACACTGTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS GCA 72 bp | GTTTGCCCGGGGTCCTCCAATGGACGCAGCGGCTGTTaGCATGGTGCGAGCATCCTCATTCTCCTCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: VCPGSSNGRSGC*HGASILILLFI Trigger: AATGAAGAGGAGAATGAGGATGCTCGCACCATGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGGCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS CAA 72 bp | TGTTTGCCCGGGGTCCTCCAATGGACGCAGCGGCTGTaGCCATGGTGCGAGCATCCTCATTCTCCTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CLPGVLQWTQRL*PWCEHPHSPLH Trigger: ATGAAGAGGAGAATGAGGATGCTCGCACCATGGCAACAGCCGCTGCGTCCATTGGAGGACCCCGGGCAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS TCA 72 bp | TGTGCAGCTGCTCAGTATAGGCATCTGGCTTCCGGATaGGCGGGTCCACCAGCATCAGGAAGGCCATGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: CAAAQYRHLASG*AGPPASGRPCR Trigger: TCTACATGGCCTTCCTGATGCTGGTGGACCCGCTCATCCGGAAGCCAGATGCCTATACTGAGCAGCTGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS CCA 72 bp | CTCCTCTTCATTGTGCAGCTGCTCAGTATAGGCATCTaGCTTCCGGATGAGCGGGTCCACCAGCATCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLFIVQLLSIGI*LPDERVHQHQE Trigger: TTCCTGATGCTGGTGGACCCGCTCATCCGGAAGCCAGATGCCTATACTGAGCAGCTGCACAATGAAGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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| CDS TCA 72 bp | CCTTCTGAGACACATTCTGGTTGTAAATGTGCCCGCTaGTGTTTCTGTAAGGCGGACAGATGCATTTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PSETHSGCKCAR*CFCKADRCICT Trigger: GGTGCAAATGCATCTGTCCGCCTTACAGAAACATCAGCGGGCACATTTACAACCAGAATGTGTCTCAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063719.15 ENSMUST00000117950.2 ENSMUST00000165125.8 |
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