Pregenerated sensors for TMEM87B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014353Ensembl transcript IDs: ENSMUST00000110325.8, ENSMUST00000143398.3, ENSMUST00000152210.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTACCAGAGCCATCCTACAGCAGCATCCTGAACGGAGGCTGAGCTaGGCACCTGTGAGGTCCCAGTGTGGTCTGCAGACTTGGGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: ITRAILQQHPERRLS*APVRSQCGLQTWGR Trigger: TCTGCCCCAAGTCTGCAGACCACACTGGGACCTCACAGGTGCTCAGCTCAGCCTCCGTTCAGGATGCTGCTGTAGGATGGCTCTGGTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR TCA 90 bp | ATCCTTAGTGTTCTCAATTACCAGAGCCATCCTACAGCAGCATCCTaGACGGAGGCTGAGCTGAGCACCTGTGAGGTCCCAGTGTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: ILSVLNYQSHPTAAS*TEAELSTCEVPVWS Trigger: AGACCACACTGGGACCTCACAGGTGCTCAGCTCAGCCTCCGTTCAGGATGCTGCTGTAGGATGGCTCTGGTAATTGAGAACACTAAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR GCA 90 bp | CTGTGGCCTGCAAGTCTTTGGACATACCCTCAAGACGTCTCTCTTTaGCCATACGTGTTCCCGAGCTCAGACTCCGTGATGTGTAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: LWPASLWTYPQDVSL*PYVFPSSDSVMCSA Trigger: TGCACTACACATCACGGAGTCTGAGCTCGGGAACACGTATGGGCAAAGAGAGACGTCTTGAGGGTATGTCCAAAGACTTGCAGGCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR GCA 90 bp | GCCAGGTTCACAGCAGAAGTAGCAGCAGCACGTGTACCTGTGGCCTaGAAGTCTTTGGACATACCCTCAAGACGTCTCTCTTTGCCCATA | + |
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Preference number: 1 (lower is better) Translates to: ARFTAEVAAARVPVA*KSLDIPSRRLSLPI Trigger: TATGGGCAAAGAGAGACGTCTTGAGGGTATGTCCAAAGACTTGCAGGCCACAGGTACACGTGCTGCTGCTACTTCTGCTGTGAACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR GCA 90 bp | ATTTCAGTCTGGAGCTACACCAGAGGCAGCATCATTTGTCTTCCCTaGTTTTTAGAAATCCCATTGAGGTGGTGTCAGAAGCATTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: ISVWSYTRGSIICLP*FLEIPLRWCQKHFP Trigger: GGGGAAATGCTTCTGACACCACCTCAATGGGATTTCTAAAAAGCAGGGAAGACAAATGATGCTGCCTCTGGTGTAGCTCCAGACTGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 90 bp | TGCAAAAACACTTGTAAGGAGGTTAAGATGGAAGTCCACTTTCTCTaGACAGAGAGTCATTTCAGTCTGGAGCTACACCAGAGGCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: CKNTCKEVKMEVHFL*TESHFSLELHQRQH Trigger: ATGCTGCCTCTGGTGTAGCTCCAGACTGAAATGACTCTCTGTCCAGAGAAAGTGGACTTCCATCTTAACCTCCTTACAAGTGTTTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 90 bp | CCTGCCTGTCATTACCACATTACATGTCCAACAGCCTGGTATCTTTaGTCACGAACGTGGCAAAACGTTCACATTTTCATCACTCTACAT | + |
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Preference number: 1 (lower is better) Translates to: PACHYHITCPTAWYL*SRTWQNVHIFITLH Trigger: ATGTAGAGTGATGAAAATGTGAACGTTTTGCCACGTTCGTGACCAAAGATACCAGGCTGTTGGACATGTAATGTGGTAATGACAGGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 90 bp | ATACAAGACCCTGCCTGTCATTACCACATTACATGTCCAACAGCCTaGTATCTTTGGTCACGAACGTGGCAAAACGTTCACATTTTCATC | + |
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Preference number: 1 (lower is better) Translates to: IQDPACHYHITCPTA*YLWSRTWQNVHIFI Trigger: GATGAAAATGTGAACGTTTTGCCACGTTCGTGACCAAAGATACCAGGCTGTTGGACATGTAATGTGGTAATGACAGGCAGGGTCTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 90 bp | TTAAGATGGAAGTCCACTTTCTCTGGACAGAGAGTCATTTCAGTCTaGAGCTACACCAGAGGCAGCATCATTTGTCTTCCCTGCTTTTTA | + |
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Preference number: 1 (lower is better) Translates to: LRWKSTFSGQRVISV*SYTRGSIICLPCFL Trigger: TAAAAAGCAGGGAAGACAAATGATGCTGCCTCTGGTGTAGCTCCAGACTGAAATGACTCTCTGTCCAGAGAAAGTGGACTTCCATCTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR TCA 90 bp | ACCATACAAAGACACAAATATCAGAACGAGAGACAAAACGTAGCATaGTCTCTCTCAGCTTCAGTCATATACAGCCAGGGCAATAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: TIQRHKYQNERQNVA*SLSASVIYSQGNSS Trigger: GGAGCTATTGCCCTGGCTGTATATGACTGAAGCTGAGAGAGATCATGCTACGTTTTGTCTCTCGTTCTGATATTTGTGTCTTTGTATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 90 bp | TACCACATTACATGTCCAACAGCCTGGTATCTTTGGTCACGAACGTaGCAAAACGTTCACATTTTCATCACTCTACATTCAAGTGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: YHITCPTAWYLWSRT*QNVHIFITLHSSAF Trigger: AAAGGCACTTGAATGTAGAGTGATGAAAATGTGAACGTTTTGCCACGTTCGTGACCAAAGATACCAGGCTGTTGGACATGTAATGTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 90 bp | TCCAAATCTAACATGAACTGTATAACAAGAAGTCTTGAATACAACTaGAGCCTGATCCTTAGTGTTCTCAATTACCAGAGCCATCCTACA | + |
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Preference number: 1 (lower is better) Translates to: SKSNMNCITRSLEYN*SLILSVLNYQSHPT Trigger: TGTAGGATGGCTCTGGTAATTGAGAACACTAAGGATCAGGCTCCAGTTGTATTCAAGACTTCTTGTTATACAGTTCATGTTAGATTTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGAGGTCCTGGGTGCACCTCCCGTCCTTGTCAGCTACAGTGGCAGCACAGGGTGTAGGGGAGTCACATaGCCAGGTTCACAGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: TEVLGAPPVLVSYSGSTGCRGVT*PGSQQK Trigger: CTTCTGCTGTGAACCTGGCCATGTGACTCCCCTACA...CCCTGTGCTGCCACTGTAGCTGACAAGGACGGGAGGTGCACCCAGGACCTCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGAGGTCCTGGGTGCACCTCCCGTCCTTGTCAGCTACAGTGGCAGCACAGGGGAAATCCCATTGAGGTaGTGTCAGAAGCATTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: TEVLGAPPVLVSYSGSTGEIPLR*CQKHFP Trigger: GGGGAAATGCTTCTGACACCACCTCAATGGGATTTC...CCCTGTGCTGCCACTGTAGCTGACAAGGACGGGAGGTGCACCCAGGACCTCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGAGGTCCTGGGTGCACCTCCCGTCCTTGTCAGCTACAGTGGCAGCACAGGGCTTTGGTCACGAACGTaGCAAAACGTTCACATTTTC | + |
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Preference number: 2 (lower is better) Translates to: TEVLGAPPVLVSYSGSTGLWSRT*QNVHIF Trigger: GAAAATGTGAACGTTTTGCCACGTTCGTGACCAAAG...CCCTGTGCTGCCACTGTAGCTGACAAGGACGGGAGGTGCACCCAGGACCTCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CAA 90 bp | ACAGCAGAAGTAGCAGCAGCACGTGTACCTGTGGCCTGCAAGTCTTaGGACATACCCTCAAGACGTCTCTCTTTGCCCATACGTGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: TAEVAAARVPVACKS*DIPSRRLSLPIRVP Trigger: GGGAACACGTATGGGCAAAGAGAGACGTCTTGAGGGTATGTCCAAAGACTTGCAGGCCACAGGTACACGTGCTGCTGCTACTTCTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCATACAAGACCCTGCCTGTCATTACCACATTACATGTCCAACAGCCTGGTAACACACAACATGGCATaGCTGTGGCTGCCGCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: RHTRPCLSLPHYMSNSLVTHNMA*LWLPPK Trigger: CTTAGGCGGCAGCCACAGGCATGCCATGTTGTGTGT...TACCAGGCTGTTGGACATGTAATGTGGTAATGACAGGCAGGGTCTTGTATGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR GCA 90 bp | GTCATTTCAGTCTGGAGCTACACCAGAGGCAGCATCATTTGTCTTCCCTGCTTTGGGGCTGAGATAAAGTaGTGTAGGGGAGTCACATGG | + |
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Preference number: 2 (lower is better) Translates to: VISVWSYTRGSIICLPCFGAEIK*CRGVTW Trigger: CCATGTGACTCCCCTACAGCACTTTATCTCAGCCCC...AAAGCAGGGAAGACAAATGATGCTGCCTCTGGTGTAGCTCCAGACTGAAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTTTTAGAAATCCCATTGAGGTGGTGTCAGAAGCATTTCCCCAGCCATCAAACATGGCATGCCTGTaGCTGCCGCCTAAGAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LLFRNPIEVVSEAFPQPSNMACL*LPPKRH Trigger: ATGCCTCTTAGGCGGCAGCCACAGGCATGCCATGTT...TGATGGCTGGGGAAATGCTTCTGACACCACCTCAATGGGATTTCTAAAAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR CCA 90 bp | CGTTATCTCGAAGGCGAGGGAAGGAATGCTCATAGATTCTTCTCTTTCCTTTTCCTGAGACACACAACATaGCATGCCTGTGGCTGCCGC | + |
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Preference number: 2 (lower is better) Translates to: RYLEGEGRNAHRFFSFLFLRHTT*HACGCR Trigger: GCGGCAGCCACAGGCATGCCATGTTGTGTGTCTCAG...GAAAAGGAAAGAGAAGAATCTATGAGCATTCCTTCCCTCGCCTTCGAGATAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CAA 90 bp | CCAAGACAACAAAGGGAAACACGTATCATAGTGAAGCTGTCAGTTTaGATGAGAGCCAGGCTTTTCCCATCACCTGACTGTGCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PRQQRETRIIVKLSV*MRARLFPSPDCAPA Trigger: TGCAGGAGCACAGTCAGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTATGATACGTGTTTCCCTTTGTTGTCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTTTTAGAAATCCCATTGAGGTGGTGTCAGAAGCATTTCCCCAGCCATCAAGACCCTCCCACTCCTaGATTCTTCATCTGCATACA | + |
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Preference number: 2 (lower is better) Translates to: LLFRNPIEVVSEAFPQPSRPSHS*ILHLHT Trigger: TGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCT...TGATGGCTGGGGAAATGCTTCTGACACCACCTCAATGGGATTTCTAAAAAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGACCCTGCCTGTCATTACCACATTACATGTCCAACAGCCTGGTATCTTTGCGCCTAAGAGGCATCTaGGCACATGTTGTTAACTTC | + |
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Preference number: 2 (lower is better) Translates to: TRPCLSLPHYMSNSLVSLRLRGI*AHVVNF Trigger: GAAGTTAACAACATGTGCTCAGATGCCTCTTAGGCG...CAAAGATACCAGGCTGTTGGACATGTAATGTGGTAATGACAGGCAGGGTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CAA 90 bp | CCCTGCCTGTCATTACCACATTACATGTCCAACAGCCTGGTATCTTaGGTCACGAACGTGGCAAAACGTTCACATTTTCATCACTCTACA | + |
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Preference number: 2 (lower is better) Translates to: PCLSLPHYMSNSLVS*VTNVAKRSHFHHST Trigger: TGTAGAGTGATGAAAATGTGAACGTTTTGCCACGTTCGTGACCAAAGATACCAGGCTGTTGGACATGTAATGTGGTAATGACAGGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CAA 90 bp | ACAGAGAGTCATTTCAGTCTGGAGCTACACCAGAGGCAGCATCATTaGTCTTCCCTGCTTTTTAGAAATCCCATTGAGGTGGTGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: TESHFSLELHQRQHH*SSLLFRNPIEVVSE Trigger: TTCTGACACCACCTCAATGGGATTTCTAAAAAGCAGGGAAGACAAATGATGCTGCCTCTGGTGTAGCTCCAGACTGAAATGACTCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR GCA 90 bp | CCAACTCCCAAGCTTACAATTTCCACCTCCTGTTTCTTACTGAAATGTAATAAATCCCCAGCCATCAACTaGAGACTCACCCTGCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: PTPKLTISTSCFLLKCNKSPAIN*RLTLLN Trigger: ATTGAGCAGGGTGAGTCTGCAGTTGATGGCTGGGGA...TTTATTACATTTCAGTAAGAAACAGGAGGTGGAAATTGTAAGCTTGGGAGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR CCA 90 bp | CCAACTCCCAAGCTTACAATTTCCACCTCCTGTTTCTTACTGAAATGTAATAAAACATGTCCAACAGCCTaGTATCTTTGGTCACGAACG | + |
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Preference number: 2 (lower is better) Translates to: PTPKLTISTSCFLLKCNKTCPTA*YLWSRT Trigger: CGTTCGTGACCAAAGATACCAGGCTGTTGGACATGT...TTTATTACATTTCAGTAAGAAACAGGAGGTGGAAATTGTAAGCTTGGGAGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR GCA 90 bp | CCAACTCCCAAGCTTACAATTTCCACCTCCTGTTTCTTACTGAAATGTAATAAAGCAGTTATCAGTAAATaGAACAGACACCACACACAT | + |
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Preference number: 2 (lower is better) Translates to: PTPKLTISTSCFLLKCNKAVISK*NRHHTH Trigger: ATGTGTGTGGTGTCTGTTGCATTTACTGATAACTGC...TTTATTACATTTCAGTAAGAAACAGGAGGTGGAAATTGTAAGCTTGGGAGTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR TCA 72 bp | GTGGTCTGCAGACTTGGGGCAGACGGGGAAGGAGCCTaGGGAGCTGCACGGAGGTCCTGGGTGCACCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: VVCRLGADGEGA*GAARRSWVHLP Trigger: CGGGAGGTGCACCCAGGACCTCCGTGCAGCTCCTCAGGCTCCTTCCCCGTCTGCCCCAAGTCTGCAGACCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR GCA 72 bp | GGGAAGGAGCCTGAGGAGCTGCACGGAGGTCCTGGGTaGACCTCCCGTCCTTGTCAGCTACAGTGGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GKEPEELHGGPG*TSRPCQLQWQH Trigger: GTGCTGCCACTGTAGCTGACAAGGACGGGAGGTGCACCCAGGACCTCCGTGCAGCTCCTCAGGCTCCTTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 72 bp | ACGGAGGCTGAGCTGAGCACCTGTGAGGTCCCAGTGTaGTCTGCAGACTTGGGGCAGACGGGGAAGGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: TEAELSTCEVPV*SADLGQTGKEP Trigger: AGGCTCCTTCCCCGTCTGCCCCAAGTCTGCAGACCACACTGGGACCTCACAGGTGCTCAGCTCAGCCTCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR TCA 72 bp | GCCATCCTACAGCAGCATCCTGAACGGAGGCTGAGCTaGGCACCTGTGAGGTCCCAGTGTGGTCTGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: AILQQHPERRLS*APVRSQCGLQT Trigger: AGTCTGCAGACCACACTGGGACCTCACAGGTGCTCAGCTCAGCCTCCGTTCAGGATGCTGCTGTAGGATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR CAA 90 bp | ACGGAGGCTGAGCTGAGCACCTGTGAGGTCCCAGTGTGGTCTGCAGACTTGGGGGTGCAGACCTGTGGGTaGAGAGTCAGCTACTTCATG | + |
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Preference number: 3 (lower is better) Translates to: TEAELSTCEVPVWSADLGVQTCG*RVSYFM Trigger: CATGAAGTAGCTGACTCTCAACCCACAGGTCTGCAC...CCCCAAGTCTGCAGACCACACTGGGACCTCACAGGTGCTCAGCTCAGCCTCCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR TCA 72 bp | CCAGCCCAGCTACAGATTCGTTTGTCCAGAGAAAACTaGGACACACAACATGGCATGCCTGTGGCTGCCGCC | + |
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Preference number: 3 (lower is better) Translates to: PAQLQIRLSREN*DTQHGMPVAAA Trigger: GGCGGCAGCCACAGGCATGCCATGTTGTGTGTCTCAGTTTTCTCTGGACAAACGAATCTGTAGCTGGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| 3UTR TCA 72 bp | GTTCTCAATTACCAGAGCCATCCTACAGCAGCATCCTaGACGGAGGCTGAGCTGAGCACCTGTGAGGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: VLNYQSHPTAAS*TEAELSTCEVP Trigger: TGGGACCTCACAGGTGCTCAGCTCAGCCTCCGTTCAGGATGCTGCTGTAGGATGGCTCTGGTAATTGAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR GCA 72 bp | GCTCACAAGAAACAGTGCACCGGGGCTGAGATAAAGTaGTGTAGGGGAGTCACATGGCCAGGTTCACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: AHKKQCTGAEIK*CRGVTWPGSQQ Trigger: CTGCTGTGAACCTGGCCATGTGACTCCCCTACAGCACTTTATCTCAGCCCCGGTGCACTGTTTCTTGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR GCA 72 bp | GCAAGTCTTTGGACATACCCTCAAGACGTCTCTCTTTaGCCATACGTGTTCCCGAGCTCAGACTCCGTGATG | + |
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Preference number: 3 (lower is better) Translates to: ASLWTYPQDVSL*PYVFPSSDSVM Trigger: CATCACGGAGTCTGAGCTCGGGAACACGTATGGGCAAAGAGAGACGTCTTGAGGGTATGTCCAAAGACTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR GCA 72 bp | ACAGCAGAAGTAGCAGCAGCACGTGTACCTGTGGCCTaGAAGTCTTTGGACATACCCTCAAGACGTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TAEVAAARVPVA*KSLDIPSRRLS Trigger: AGAGAGACGTCTTGAGGGTATGTCCAAAGACTTGCAGGCCACAGGTACACGTGCTGCTGCTACTTCTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 72 bp | CCAGAGAAAACTGAGACACACAACATGGCATGCCTGTaGCTGCCGCCTAAGAGGCATCTGAGCACATGTTGT | + |
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Preference number: 3 (lower is better) Translates to: PEKTETHNMACL*LPPKRHLSTCC Trigger: ACAACATGTGCTCAGATGCCTCTTAGGCGGCAGCCACAGGCATGCCATGTTGTGTGTCTCAGTTTTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| 3UTR TCA 72 bp | CAGACCTGTGGGTTGAGAGTCAGCTACTTCATGCTGTaGGGACAGGGTACTAAAAACGTGAAGCAGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: QTCGLRVSYFML*GQGTKNVKQAM Trigger: CATGGCCTGCTTCACGTTTTTAGTACCCTGTCCTCACAGCATGAAGTAGCTGACTCTCAACCCACAGGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR TCA 72 bp | AGATGGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTaGATTCTTCATCTGCATACACAGATCTCCAAGACA | + |
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Preference number: 3 (lower is better) Translates to: RWLSEGGRPSHS*ILHLHTQISKT Trigger: TGTCTTGGAGATCTGTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| 3UTR CCA 72 bp | GCTGGCTCTAAGCAGAAATACTCAAGTGCAGACCTGTaGGTTGAGAGTCAGCTACTTCATGCTGTGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: AGSKQKYSSADL*VESQLLHAVRT Trigger: TGTCCTCACAGCATGAAGTAGCTGACTCTCAACCCACAGGTCTGCACTTGAGTATTTCTGCTTAGAGCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 72 bp | GAAGAAGCTTCTAAGTACAGTATTGAGTCCCCGCCCTaGAGTCCCCGTCCTGGAGTACACACTTCCTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: EEASKYSIESPP*SPRPGVHTSLK Trigger: TTTTAAGGAAGTGTGTACTCCAGGACGGGGACTCCAGGGCGGGGACTCAATACTGTACTTAGAAGCTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR TCA 72 bp | CTCTTTGCCCATACGTGTTCCCGAGCTCAGACTCCGTaGTGTGTAGTGCATGGTGGTATTTACAAACAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LFAHTCSRAQTP*CVVHGGIYKQE Trigger: CTCTTGTTTGTAAATACCACCATGCACTACACATCACGGAGTCTGAGCTCGGGAACACGTATGGGCAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR GCA 72 bp | AGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTaGATACACAGATCTCCAAGACAACAAAGGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: RVADPPTPEFFI*IHRSPRQQRET Trigger: TGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| 3UTR CCA 72 bp | CCTGCCTGTCATTACCACATTACATGTCCAACAGCCTaGTATCTTTGGTCACGAACGTGGCAAAACGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: PACHYHITCPTA*YLWSRTWQNVH Trigger: GTGAACGTTTTGCCACGTTCGTGACCAAAGATACCAGGCTGTTGGACATGTAATGTGGTAATGACAGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CCA 72 bp | AAGTCCACTTTCTCTGGACAGAGAGTCATTTCAGTCTaGAGCTACACCAGAGGCAGCATCATTTGTCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: KSTFSGQRVISV*SYTRGSIICLP Trigger: GGGAAGACAAATGATGCTGCCTCTGGTGTAGCTCCAGACTGAAATGACTCTCTGTCCAGAGAAAGTGGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR-3UTR CAA 90 bp | CAATTATCCCAAGTTATTCTAACTCACAGGGCAGAAGTCCTCCAGAGAAGGCATTGTAGCTCTCTCTGGTaGTCCCAGAACTATGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QLSQVILTHRAEVLQRRHCSSLW*SQNYVD Trigger: GTCTACATAGTTCTGGGACAACCAGAGAGAGCTACA...ATGCCTTCTCTGGAGGACTTCTGCCCTGTGAGTTAGAATAACTTGGGATAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR TCA 72 bp | ACATGGCATGCCTGTGGCTGCCGCCTAAGAGGCATCTaGGCACATGTTGTTAACTTCTTAAATTGTTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TWHACGCRLRGI*AHVVNFLNCFQ Trigger: TTGGAAACAATTTAAGAAGTTAACAACATGTGCTCAGATGCCTCTTAGGCGGCAGCCACAGGCATGCCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| 3UTR CCA 72 bp | ACTTGTAAGGAGGTTAAGATGGAAGTCCACTTTCTCTaGACAGAGAGTCATTTCAGTCTGGAGCTACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: TCKEVKMEVHFL*TESHFSLELHQ Trigger: CTGGTGTAGCTCCAGACTGAAATGACTCTCTGTCCAGAGAAAGTGGACTTCCATCTTAACCTCCTTACAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCATTTCAGTCTGGAGCTACACCAGAGGCAGCATCATTTGTCTTCCCTGCTTTGGTAAGGTTAGATGTTaGTATATCTCACAAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VISVWSYTRGSIICLPCFGKVRC*YISQVS Trigger: GGAGACTTGTGAGATATACAAACATCTAACCTTACC...AAAGCAGGGAAGACAAATGATGCTGCCTCTGGTGTAGCTCCAGACTGAAATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR TCA 72 bp | AGACACAAATATCAGAACGAGAGACAAAACGTAGCATaGTCTCTCTCAGCTTCAGTCATATACAGCCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RHKYQNERQNVA*SLSASVIYSQG Trigger: GCCCTGGCTGTATATGACTGAAGCTGAGAGAGATCATGCTACGTTTTGTCTCTCGTTCTGATATTTGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR CCA 72 bp | ACATGTCCAACAGCCTGGTATCTTTGGTCACGAACGTaGCAAAACGTTCACATTTTCATCACTCTACATTCA | + |
|
Preference number: 3 (lower is better) Translates to: TCPTAWYLWSRT*QNVHIFITLHS Trigger: TGAATGTAGAGTGATGAAAATGTGAACGTTTTGCCACGTTCGTGACCAAAGATACCAGGCTGTTGGACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR CCA 72 bp | CATTACCACATTACATGTCCAACAGCCTGGTATCTTTaGTCACGAACGTGGCAAAACGTTCACATTTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: HYHITCPTAWYL*SRTWQNVHIFI Trigger: GATGAAAATGTGAACGTTTTGCCACGTTCGTGACCAAAGATACCAGGCTGTTGGACATGTAATGTGGTAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR CCA 72 bp | CACATGCTTGCAAAAACACTTGTAAGGAGGTTAAGATaGAAGTCCACTTTCTCTGGACAGAGAGTCATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HMLAKTLVRRLR*KSTFSGQRVIS Trigger: TGAAATGACTCTCTGTCCAGAGAAAGTGGACTTCCATCTTAACCTCCTTACAAGTGTTTTTGCAAGCATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR CCA 72 bp | AACATGAACTGTATAACAAGAAGTCTTGAATACAACTaGAGCCTGATCCTTAGTGTTCTCAATTACCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NMNCITRSLEYN*SLILSVLNYQS Trigger: GCTCTGGTAATTGAGAACACTAAGGATCAGGCTCCAGTTGTATTCAAGACTTCTTGTTATACAGTTCATGTT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR GCA 72 bp | TTCTTTCTGATAGACGTAAGGCTTGGTGTTTTATATTaGTTACTGCATGCTGTCAACCATACAAAGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: FFLIDVRLGVLY*LLHAVNHTKTQ Trigger: TTGTGTCTTTGTATGGTTGACAGCATGCAGTAAGCAATATAAAACACCAAGCCTTACGTCTATCAGAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR TCA 72 bp | TTGTGTACACCAATGAAAGGGACAAGATTAAATATATaGACATGCTCGAGTTCCAATATTGTCACTTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LCTPMKGTRLNI*TCSSSNIVTSV Trigger: TACTGAAGTGACAATATTGGAACTCGAGCATGTTCATATATTTAATCTTGTCCCTTTCATTGGTGTACACAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACCCCGAGCTCGGGGACTaGGTCCACAGCCGCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHPELGD*VHSRRD Trigger: GTCCCGGCGGCTGTGGACGCAGTCCCCGAGCTCGGG...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | TTTAAAGATGGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCCCCGAGCTCGGGGACTaGGTCCACAGCCGCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKDGFLRVADPPTPEFFIPELGD*VHSRRD Trigger: GTCCCGGCGGCTGTGGACGCAGTCCCCGAGCTCGGG...GATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCCATCTTTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCCATCACCTGACTGTGCTCCTGCACACACCGGACCCACTGGGGCCCTGGAGAGAGAGGCAGGCTaGCCAGAAGAACAAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFPSPDCAPAHTGPTGALEREAG*PEEQDQ Trigger: CTGATCTTGTTCTTCTGGCCAGCCTGCCTCTCTCTC...CAGGGCCCCAGTGGGTCCGGTGTGTGCAGGAGCACAGTCAGGTGATGGGAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143398.3 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCCATCACCTGACTGTGCTCCTGCACACACCGGACCCACTGGGGCCCTGTGGAAGCCATCTTTCTaGGTCCTGGCTACAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPSPDCAPAHTGPTGALWKPSF*VLATTS Trigger: GGATGTTGTAGCCAGGACCCAGAAAGATGGCTTCCA...CAGGGCCCCAGTGGGTCCGGTGTGTGCAGGAGCACAGTCAGGTGATGGGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCCATCACCTGACTGTGCTCCTGCACACACCGGACCCACTGGGGCCCTGACATCTGGATCAGCATaGAGTTCATGTCTTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFPSPDCAPAHTGPTGALTSGSA*SSCLWD Trigger: GTCCCAAAGACATGAACTTCATGCTGATCCAGATGT...CAGGGCCCCAGTGGGTCCGGTGTGTGCAGGAGCACAGTCAGGTGATGGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCCATCACCTGACTGTGCTCCTGCACACACCGGACCCACTGGGGCCCTGCACAATAAGGATGACTaGAAAGAGGAAGCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFPSPDCAPAHTGPTGALHNKDD*KEEAPK Trigger: TTTTGGAGCTTCCTCTTTTCAGTCATCCTTATTGTG...CAGGGCCCCAGTGGGTCCGGTGTGTGCAGGAGCACAGTCAGGTGATGGGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | ACGGAGGTCCTGGGTGCACCTCCCGTCCTTGTCAGCTACAGTGGCAGCACAGGGTATAGAAGCCAGCACTaGAAAGATGAGTGTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLGAPPVLVSYSGSTGYRSQH*KDECIC Trigger: ACAAATACACTCATCTTTGCAGTGCTGGCTTCTATA...CCCTGTGCTGCCACTGTAGCTGACAAGGACGGGAGGTGCACCCAGGACCTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR CAA 72 bp | GTAGCAGCAGCACGTGTACCTGTGGCCTGCAAGTCTTaGGACATACCCTCAAGACGTCTCTCTTTGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: VAAARVPVACKS*DIPSRRLSLPI Trigger: TATGGGCAAAGAGAGACGTCTTGAGGGTATGTCCAAAGACTTGCAGGCCACAGGTACACGTGCTGCTGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| CDS-3UTR TCA 90 bp | ACGGAGGCTGAGCTGAGCACCTGTGAGGTCCCAGTGTGGTCTGCAGACTTGGGGAACAGTCAATGTTTTTaGAGTAAGCACAGACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEAELSTCEVPVWSADLGNSQCF*SKHRHL Trigger: CAGATGTCTGTGCTTACTTCAAAAACATTGACTGTT...CCCCAAGTCTGCAGACCACACTGGGACCTCACAGGTGCTCAGCTCAGCCTCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCCATCACCTGACTGTGCTCCTGCACACACCGGACCCACTGGGGCCCTGTTTCAGATGTTACCATaGATTCCTCGACTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFPSPDCAPAHTGPTGALFQMLP*IPRLHH Trigger: ATGATGAAGTCGAGGAATTCATGGTAACATCTGAAA...CAGGGCCCCAGTGGGTCCGGTGTGTGCAGGAGCACAGTCAGGTGATGGGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGTCATTTTCATGTTTTCTCAATTATCCCAAGTTATTCTAACTCACAGGGCCCCGAGCTCGGGGACTaGGTCCACAGCCGCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PCHFHVFSIIPSYSNSQGPELGD*VHSRRD Trigger: GTCCCGGCGGCTGTGGACGCAGTCCCCGAGCTCGGG...GCCCTGTGAGTTAGAATAACTTGGGATAATTGAGAAAACATGAAAATGACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACAGTCCAATCACCCGGTaGATCACTGTTCCTAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHSPITR*ITVPKR Trigger: TCGCTTAGGAACAGTGATGCACCGGGTGATTGGACT...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCCATCACCTGACTGTGCTCCTGCACACACCGGACCCACTGGGGCCCTGTATAGAAGCCAGCACTaGAAAGATGAGTGTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPSPDCAPAHTGPTGALYRSQH*KDECIC Trigger: ACAAATACACTCATCTTTGCAGTGCTGGCTTCTATA...CAGGGCCCCAGTGGGTCCGGTGTGTGCAGGAGCACAGTCAGGTGATGGGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACAGCGAGGCTTCACAATaGCATAACCCAAGCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHSEASQ*HNPSSQ Trigger: TTGTGAGCTTGGGTTATGGCATTGTGAAGCCTCGCT...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACCATCTTTCTGGGTCCTaGCTACAACATCCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHHLSGS*LQHPLI Trigger: GATCAACGGATGTTGTAGCCAGGACCCAGAAAGATG...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| 3UTR CAA 72 bp | TGCAAGTCTTTGGACATACCCTCAAGACGTCTCTCTTaGCCCATACGTGTTCCCGAGCTCAGACTCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CKSLDIPSRRLS*PIRVPELRLRD Trigger: ATCACGGAGTCTGAGCTCGGGAACACGTATGGGCAAAGAGAGACGTCTTGAGGGTATGTCCAAAGACTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR CAA 72 bp | GTTTCCCTAATTCTGAAGAAGCTTCTAAGTACAGTATaGAGTCCCCGCCCTGGAGTCCCCGTCCTGGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLILKKLLSTV*SPRPGVPVLEY Trigger: GTACTCCAGGACGGGGACTCCAGGGCGGGGACTCAATACTGTACTTAGAAGCTTCTTCAGAATTAGGGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACGACGCCTTCAATGGCTaGAAAGATCAAGTAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHDAFNG*KDQVKQ Trigger: CTGCTTTACTTGATCTTTGCAGCCATTGAAGGCGTC...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACATGCCTGTGAATCACTaGTGCAATCCAAGTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHMPVNH*CNPSFH Trigger: GTGAAAACTTGGATTGCAGCAGTGATTCACAGGCAT...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACCACAATAAGGATGACTaGAAAGAGGAAGCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHHNKDD*KEEAPK Trigger: TTTTGGAGCTTCCTCTTTTCAGTCATCCTTATTGTG...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACCCTGTGAATCACTGCTaGAATCCAAGTTTTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHPVNHC*NPSFHF Trigger: AAAGTGAAAACTTGGATTGCAGCAGTGATTCACAGG...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | TTTAAAGATGGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCAGCGAGGCTTCACAATaGCATAACCCAAGCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FKDGFLRVADPPTPEFFISEASQ*HNPSSQ Trigger: TTGTGAGCTTGGGTTATGGCATTGTGAAGCCTCGCT...GATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCCATCTTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACTTTCAGATGTTACCATaGATTCCTCGACTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHFQMLP*IPRLHH Trigger: ATGATGAAGTCGAGGAATTCATGGTAACATCTGAAA...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | ATAGTGAAGCTGTCAGTTTTGATGAGAGCCAGGCTTTTCCCATCACCTGACTGTAGCGAGGCTTCACAATaGCATAACCCAAGCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: IVKLSVLMRARLFPSPDCSEASQ*HNPSSQ Trigger: TTGTGAGCTTGGGTTATGGCATTGTGAAGCCTCGCT...ACAGTCAGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | CAATTATCCCAAGTTATTCTAACTCACAGGGCAGAAGTCCTCCAGAGAAGGCATAGTCCAATCACCCGGTaGATCACTGTTCCTAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QLSQVILTHRAEVLQRRHSPITR*ITVPKR Trigger: TCGCTTAGGAACAGTGATGCACCGGGTGATTGGACT...ATGCCTTCTCTGGAGGACTTCTGCCCTGTGAGTTAGAATAACTTGGGATAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAGATGGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCGACGCCTTCAATGGCTaGAAAGATCAAGTAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKDGFLRVADPPTPEFFIDAFNG*KDQVKQ Trigger: CTGCTTTACTTGATCTTTGCAGCCATTGAAGGCGTC...GATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCCATCTTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTGCATACACAGTCTTCATAGTCTGTaGCAAACACCAACTATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFLRVADPPTPEFFICIHSLHSL*QTPTIL Trigger: CAAAATAGTTGGTGTTTGGCACAGACTATGAAGACT...GTGTATGCAGATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152210.2 |
||
| CDS-3UTR TCA 90 bp | CGTATCATAGTGAAGCTGTCAGTTTTGATGAGAGCCAGGCTTTTCCCATCACCTGAATACCAAAGGTCCTaGTTTGTCATTGACCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIIVKLSVLMRARLFPSPEYQRS*FVIDRP Trigger: AGGACGGTCAATGACAAATCAGGACCTTTGGTATTC...AGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTATGATACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR TCA 90 bp | ATAGTGAAGCTGTCAGTTTTGATGAGAGCCAGGCTTTTCCCATCACCTGACTGTACATCTGGATCAGCATaGAGTTCATGTCTTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVKLSVLMRARLFPSPDCTSGSA*SSCLWD Trigger: GTCCCAAAGACATGAACTTCATGCTGATCCAGATGT...ACAGTCAGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | CCTGAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTAGTCCAATCACCCGGTaGATCACTGTTCCTAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PEFFICIHRSPRQQRETRSPITR*ITVPKR Trigger: TCGCTTAGGAACAGTGATGCACCGGGTGATTGGACT...ACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR GCA 90 bp | GTCATTTCAGTCTGGAGCTACACCAGAGGCAGCATCATTTGTCTTCCCTGCTTTCCTGTGAATCACTGCTaGAATCCAAGTTTTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VISVWSYTRGSIICLPCFPVNHC*NPSFHF Trigger: AAAGTGAAAACTTGGATTGCAGCAGTGATTCACAGG...AAAGCAGGGAAGACAAATGATGCTGCCTCTGGTGTAGCTCCAGACTGAAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| CDS-3UTR CCA 90 bp | GTCATTTCAGTCTGGAGCTACACCAGAGGCAGCATCATTTGTCTTCCCTGCTTTTCCGTTGATCCTTCCTaGCTTGAAATGTTTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: VISVWSYTRGSIICLPCFSVDPS*LEMFLI Trigger: TATCAGAAACATTTCAAGCCAGGAAGGATCAACGGA...AAAGCAGGGAAGACAAATGATGCTGCCTCTGGTGTAGCTCCAGACTGAAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| 3UTR CAA 72 bp | AGCATCATTTGTCTTCCCTGCTTTTTAGAAATCCCATaGAGGTGGTGTCAGAAGCATTTCCCCAGCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIICLPCFLEIP*RWCQKHFPSHQ Trigger: TTGATGGCTGGGGAAATGCTTCTGACACCACCTCAATGGGATTTCTAAAAAGCAGGGAAGACAAATGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTACATCTGGATCAGCATaGAGTTCATGTCTTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PEFFICIHRSPRQQRETRTSGSA*SSCLWD Trigger: GTCCCAAAGACATGAACTTCATGCTGATCCAGATGT...ACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAAGATGGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCAACAGTCAATGTTTTTaGAGTAAGCACAGACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKDGFLRVADPPTPEFFINSQCF*SKHRHL Trigger: CAGATGTCTGTGCTTACTTCAAAAACATTGACTGTT...GATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCCATCTTTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR TCA 90 bp | AGGCATACAAGACCCTGCCTGTCATTACCACATTACATGTCCAACAGCCTGGTATTTCAGATGTTACCATaGATTCCTCGACTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHTRPCLSLPHYMSNSLVFQMLP*IPRLHH Trigger: ATGATGAAGTCGAGGAATTCATGGTAACATCTGAAA...TACCAGGCTGTTGGACATGTAATGTGGTAATGACAGGCAGGGTCTTGTATGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| CDS-3UTR GCA 90 bp | TTTAAAGATGGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCTATAGAAGCCAGCACTaGAAAGATGAGTGTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKDGFLRVADPPTPEFFIYRSQH*KDECIC Trigger: ACAAATACACTCATCTTTGCAGTGCTGGCTTCTATA...GATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCCATCTTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CCA 90 bp | GAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTATCCATCTTTCTGGGTCCTaGCTACAACATCCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: EFFICIHRSPRQQRETRIHLSGS*LQHPLI Trigger: GATCAACGGATGTTGTAGCCAGGACCCAGAAAGATG...GATACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR TCA 90 bp | ATAGTGAAGCTGTCAGTTTTGATGAGAGCCAGGCTTTTCCCATCACCTGACTGTAACAGTCAATGTTTTTaGAGTAAGCACAGACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVKLSVLMRARLFPSPDCNSQCF*SKHRHL Trigger: CAGATGTCTGTGCTTACTTCAAAAACATTGACTGTT...ACAGTCAGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CCA 90 bp | CCAACTCCCAAGCTTACAATTTCCACCTCCTGTTTCTTACTGAAATGTAATAAATGGAAGCCATCTTTCTaGGTCCTGGCTACAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: PTPKLTISTSCFLLKCNKWKPSF*VLATTS Trigger: GGATGTTGTAGCCAGGACCCAGAAAGATGGCTTCCA...TTTATTACATTTCAGTAAGAAACAGGAGGTGGAAATTGTAAGCTTGGGAGTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CAA 72 bp | TCATTACCACATTACATGTCCAACAGCCTGGTATCTTaGGTCACGAACGTGGCAAAACGTTCACATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPHYMSNSLVS*VTNVAKRSHFH Trigger: ATGAAAATGTGAACGTTTTGCCACGTTCGTGACCAAAGATACCAGGCTGTTGGACATGTAATGTGGTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| CDS-3UTR TCA 90 bp | CCTGAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTCACAATAAGGATGACTaGAAAGAGGAAGCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PEFFICIHRSPRQQRETRHNKDD*KEEAPK Trigger: TTTTGGAGCTTCCTCTTTTCAGTCATCCTTATTGTG...ACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR GCA 90 bp | GAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTATCATGCCTGTGAATCACTaGTGCAATCCAAGTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EFFICIHRSPRQQRETRIMPVNH*CNPSFH Trigger: GTGAAAACTTGGATTGCAGCAGTGATTCACAGGCAT...GATACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CCA 90 bp | CCTGAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTTCCGTTGATCCTTCCTaGCTTGAAATGTTTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: PEFFICIHRSPRQQRETRSVDPS*LEMFLI Trigger: TATCAGAAACATTTCAAGCCAGGAAGGATCAACGGA...ACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR TCA 90 bp | CCTTGTCATTTTCATGTTTTCTCAATTATCCCAAGTTATTCTAACTCACAGGGCGAATACCAAAGGTCCTaGTTTGTCATTGACCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PCHFHVFSIIPSYSNSQGEYQRS*FVIDRP Trigger: AGGACGGTCAATGACAAATCAGGACCTTTGGTATTC...GCCCTGTGAGTTAGAATAACTTGGGATAATTGAGAAAACATGAAAATGACAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| CDS-3UTR CCA 90 bp | GAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTATCTCCGTTGATCCTTCCTaGCTTGAAATGTTTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: EFFICIHRSPRQQRETRISVDPS*LEMFLI Trigger: TATCAGAAACATTTCAAGCCAGGAAGGATCAACGGA...GATACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| 3UTR CAA 72 bp | CTTCTTTCTGATAGACGTAAGGCTTGGTGTTTTATATaGCTTACTGCATGCTGTCAACCATACAAAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSDRRKAWCFI*LTACCQPYKDT Trigger: TGTGTCTTTGTATGGTTGACAGCATGCAGTAAGCAATATAAAACACCAAGCCTTACGTCTATCAGAAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| 3UTR CAA 72 bp | ATGTGTAGTGCATGGTGGTATTTACAAACAAGAGCTTaGTGTACACCAATGAAAGGGACAAGATTAAATATA | + |
|
Preference number: 4 (lower is better) Translates to: MCSAWWYLQTRA*CTPMKGTRLNI Trigger: TATATTTAATCTTGTCCCTTTCATTGGTGTACACAAAGCTCTTGTTTGTAAATACCACCATGCACTACACAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| CDS-3UTR CAA 90 bp | CTTTTCCCATCACCTGACTGTGCTCCTGCACACACCGGACCCACTGGGGCCCTGATGAAGTTCATGTCTTaGGGACAGCTCCTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFPSPDCAPAHTGPTGALMKFMS*GQLLLQ Trigger: CTGGAGGAGGAGCTGTCCCAAAGACATGAACTTCAT...CAGGGCCCCAGTGGGTCCGGTGTGTGCAGGAGCACAGTCAGGTGATGGGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | CTTTTCCCATCACCTGACTGTGCTCCTGCACACACCGGACCCACTGGGGCCCTGTGGCTACAACATCCGTaGATCCTTCCTGGCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFPSPDCAPAHTGPTGALWLQHP*ILPGLK Trigger: TTTCAAGCCAGGAAGGATCAACGGATGTTGTAGCCA...CAGGGCCCCAGTGGGTCCGGTGTGTGCAGGAGCACAGTCAGGTGATGGGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | CTTTTCCCATCACCTGACTGTGCTCCTGCACACACCGGACCCACTGGGGCCCTGCATACCTCTGATTATTaGCTGACGGCCTCCATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFPSPDCAPAHTGPTGALHTSDY*LTASIR Trigger: TCTTATGGAGGCCGTCAGCAAATAATCAGAGGTATG...CAGGGCCCCAGTGGGTCCGGTGTGTGCAGGAGCACAGTCAGGTGATGGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS GCA 90 bp | ATCAGAGTCATTCGCCCCGATGACTCTCATGACGCCTTCAATGGCTaGAAAGATCAAGTAAAGCAGTCCCAGTCCAATCACCCGGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: IRVIRPDDSHDAFNG*KDQVKQSQSNHPVH Trigger: ATGCACCGGGTGATTGGACTGGGACTGCTTTACTTGATCTTTGCAGCCATTGAAGGCGTCATGAGAGTCATCGGGGCGAATGACTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143398.3 |
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| CDS-3UTR CAA 90 bp | GTCATTTCAGTCTGGAGCTACACCAGAGGCAGCATCATTTGTCTTCCCTGCTTTATGAAGTTCATGTCTTaGGGACAGCTCCTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VISVWSYTRGSIICLPCFMKFMS*GQLLLQ Trigger: CTGGAGGAGGAGCTGTCCCAAAGACATGAACTTCAT...AAAGCAGGGAAGACAAATGATGCTGCCTCTGGTGTAGCTCCAGACTGAAATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| CDS TCA 90 bp | GATCTCAGTAGAGTTAAACATAGTTTTCCTGAATACCAAAGGTCCTaGTTTGTCATTGACCGTCCTCGTCCAAAGCCCGAGCTCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: DLSRVKHSFPEYQRS*FVIDRPRPKPELGD Trigger: GTCCCCGAGCTCGGGCTTTGGACGAGGACGGTCAATGACAAATCAGGACCTTTGGTATTCAGGAAAACTATGTTTAACTCTACTGAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | CGTATCATAGTGAAGCTGTCAGTTTTGATGAGAGCCAGGCTTTTCCCATCACCTTGGCTACAACATCCGTaGATCCTTCCTGGCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RIIVKLSVLMRARLFPSPWLQHP*ILPGLK Trigger: TTTCAAGCCAGGAAGGATCAACGGATGTTGTAGCCA...AGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTATGATACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | ATAGTGAAGCTGTCAGTTTTGATGAGAGCCAGGCTTTTCCCATCACCTGACTGTTGGCTACAACATCCGTaGATCCTTCCTGGCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IVKLSVLMRARLFPSPDCWLQHP*ILPGLK Trigger: TTTCAAGCCAGGAAGGATCAACGGATGTTGTAGCCA...ACAGTCAGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | TTTAAAGATGGCTTTCTGAGGGTGGCAGACCCTCCCACTCCTGAATTCTTCATCGACAGTCCAGTGCTGTaGATGTTTTGGTATTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: FKDGFLRVADPPTPEFFIDSPVL*MFWYSL Trigger: TAGTGAATACCAAAACATCAACAGCACTGGACTGTC...GATGAAGAATTCAGGAGTGGGAGGGTCTGCCACCCTCAGAAAGCCATCTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | ATAGTGAAGCTGTCAGTTTTGATGAGAGCCAGGCTTTTCCCATCACCTGACTGTGACAGTCCAGTGCTGTaGATGTTTTGGTATTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: IVKLSVLMRARLFPSPDCDSPVL*MFWYSL Trigger: TAGTGAATACCAAAACATCAACAGCACTGGACTGTC...ACAGTCAGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | CCTGAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTCATACCTCTGATTATTaGCTGACGGCCTCCATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PEFFICIHRSPRQQRETRHTSDY*LTASIR Trigger: TCTTATGGAGGCCGTCAGCAAATAATCAGAGGTATG...ACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | ATAGTGAAGCTGTCAGTTTTGATGAGAGCCAGGCTTTTCCCATCACCTGACTGTGACTTCACAGAAAACTaGATCTCAGTAGAGTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IVKLSVLMRARLFPSPDCDFTEN*ISVELN Trigger: GTTTAACTCTACTGAGATCAAGTTTTCTGTGAAGTC...ACAGTCAGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | ACAAGACCCTGCCTGTCATTACCACATTACATGTCCAACAGCCTGGTATCTTTGCCAAGTTTTCACTTTTaGTTGTCCAACAGTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: TRPCLSLPHYMSNSLVSLPSFHF*LSNSQC Trigger: ACATTGACTGTTGGACAACAAAAAGTGAAAACTTGG...CAAAGATACCAGGCTGTTGGACATGTAATGTGGTAATGACAGGCAGGGTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| CDS-3UTR CAA 90 bp | ATAGTGAAGCTGTCAGTTTTGATGAGAGCCAGGCTTTTCCCATCACCTGACTGTCCAAGTTTTCACTTTTaGTTGTCCAACAGTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: IVKLSVLMRARLFPSPDCPSFHF*LSNSQC Trigger: ACATTGACTGTTGGACAACAAAAAGTGAAAACTTGG...ACAGTCAGGTGATGGGAAAAGCCTGGCTCTCATCAAAACTGACAGCTTCACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS TCA 90 bp | ACTTCATCATCAGAGTCATCTATCAAGGGCATGAAGGCATACCTCTaGTTATTTGCTGACGGCCTCCATAAGAACATTATCACAATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSSSESSIKGMKAYL*LFADGLHKNIITIR Trigger: CCTTATTGTGATAATGTTCTTATGGAGGCCGTCAGCAAATAATCAGAGGTATGCCTTCATGCCCTTGATAGATGACTCTGATGATGAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | GAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTATCCAAACACCAACTATTTaGGAAGGACATGGTAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EFFICIHRSPRQQRETRIQTPTI*EGHGKG Trigger: TCCTTTACCATGTCCTTCCAAAATAGTTGGTGTTTG...GATACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | GAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTATCGACTTCACAGAAAACTaGATCTCAGTAGAGTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: EFFICIHRSPRQQRETRIDFTEN*ISVELN Trigger: GTTTAACTCTACTGAGATCAAGTTTTCTGTGAAGTC...GATACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | GAATTCTTCATCTGCATACACAGATCTCCAAGACAACAAAGGGAAACACGTATCCCAAGTTTTCACTTTTaGTTGTCCAACAGTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: EFFICIHRSPRQQRETRIPSFHF*LSNSQC Trigger: ACATTGACTGTTGGACAACAAAAAGTGAAAACTTGG...GATACGTGTTTCCCTTTGTTGTCTTGGAGATCTGTGTATGCAGATGAAGAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS-3UTR CAA 90 bp | CCAACTCCCAAGCTTACAATTTCCACCTCCTGTTTCTTACTGAAATGTAATAAAGACAGTCCAGTGCTGTaGATGTTTTGGTATTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: PTPKLTISTSCFLLKCNKDSPVL*MFWYSL Trigger: TAGTGAATACCAAAACATCAACAGCACTGGACTGTC...TTTATTACATTTCAGTAAGAAACAGGAGGTGGAAATTGTAAGCTTGGGAGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| CDS-3UTR CAA 90 bp | CCTTGTCATTTTCATGTTTTCTCAATTATCCCAAGTTATTCTAACTCACAGGGCGACTTCACAGAAAACTaGATCTCAGTAGAGTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PCHFHVFSIIPSYSNSQGDFTEN*ISVELN Trigger: GTTTAACTCTACTGAGATCAAGTTTTCTGTGAAGTC...GCCCTGTGAGTTAGAATAACTTGGGATAATTGAGAAAACATGAAAATGACAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110325.8 |
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| CDS GCA 72 bp | ATTGACCGTCCTCGTCCAAAGCCCGAGCTCGGGGACTaGGTCCACAGCCGCCGGGACCCAGCACAGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: IDRPRPKPELGD*VHSRRDPAQET Trigger: TGTCTCCTGTGCTGGGTCCCGGCGGCTGTGGACGCAGTCCCCGAGCTCGGGCTTTGGACGAGGACGGTCAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS CAA 90 bp | GAGTTAAACATAGTTTTCCTGAATACCAAAGGTCCTGATTTGTCATaGACCGTCCTCGTCCAAAGCCCGAGCTCGGGGACTGCGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ELNIVFLNTKGPDLS*TVLVQSPSSGTAST Trigger: TGTGGACGCAGTCCCCGAGCTCGGGCTTTGGACGAGGACGGTCAATGACAAATCAGGACCTTTGGTATTCAGGAAAACTATGTTTAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS CAA 72 bp | ATAGTTTTCCTGAATACCAAAGGTCCTGATTTGTCATaGACCGTCCTCGTCCAAAGCCCGAGCTCGGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: IVFLNTKGPDLS*TVLVQSPSSGT Trigger: AGTCCCCGAGCTCGGGCTTTGGACGAGGACGGTCAATGACAAATCAGGACCTTTGGTATTCAGGAAAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS CAA 90 bp | TCAGTAGAGTTAAACATAGTTTTCCTGAATACCAAAGGTCCTGATTaGTCATTGACCGTCCTCGTCCAAAGCCCGAGCTCGGGGACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SVELNIVFLNTKGPD*SLTVLVQSPSSGTA Trigger: CGCAGTCCCCGAGCTCGGGCTTTGGACGAGGACGGTCAATGACAAATCAGGACCTTTGGTATTCAGGAAAACTATGTTTAACTCTACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS CAA 72 bp | AGCACAGACATCTGGATCAGCATGAAGTTCATGTCTTaGGGACAGCTCCTCCTCCAGATCAGGGTAATCATT | + |
|
Preference number: 6 (lower is better) Translates to: STDIWISMKFMS*GQLLLQIRVII Trigger: AATGATTACCCTGATCTGGAGGAGGAGCTGTCCCAAAGACATGAACTTCATGCTGATCCAGATGTCTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS CAA 90 bp | TTTGAAGTAAGCACAGACATCTGGATCAGCATGAAGTTCATGTCTTaGGGACAGCTCCTCCTCCAGATCAGGGTAATCATTGTGACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FEVSTDIWISMKFMS*GQLLLQIRVIIVTG Trigger: ACCTGTCACAATGATTACCCTGATCTGGAGGAGGAGCTGTCCCAAAGACATGAACTTCATGCTGATCCAGATGTCTGTGCTTACTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS TCA 72 bp | AGAGTTAAACATAGTTTTCCTGAATACCAAAGGTCCTaGTTTGTCATTGACCGTCCTCGTCCAAAGCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RVKHSFPEYQRS*FVIDRPRPKPE Trigger: CTCGGGCTTTGGACGAGGACGGTCAATGACAAATCAGGACCTTTGGTATTCAGGAAAACTATGTTTAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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| CDS TCA 72 bp | TCAGAGTCATCTATCAAGGGCATGAAGGCATACCTCTaGTTATTTGCTGACGGCCTCCATAAGAACATTATC | + |
|
Preference number: 6 (lower is better) Translates to: SESSIKGMKAYL*LFADGLHKNII Trigger: GATAATGTTCTTATGGAGGCCGTCAGCAAATAATCAGAGGTATGCCTTCATGCCCTTGATAGATGACTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS CAA 72 bp | ACAGGTCCAGAACAACTGAACGACTTCACAGAAAACTaGATCTCAGTAGAGTTAAACATAGTTTTCCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TGPEQLNDFTEN*ISVELNIVFLN Trigger: ATTCAGGAAAACTATGTTTAACTCTACTGAGATCAAGTTTTCTGTGAAGTCGTTCAGTTGTTCTGGACCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
||
| CDS TCA 72 bp | GTTTTATTCCCTCAGTTAAATTTTCAGATGTTACCATaGATTCCTCGACTTCATCATCAGAGTCATCTATCA | + |
|
Preference number: 6 (lower is better) Translates to: VLFPQLNFQMLP*IPRLHHQSHLS Trigger: TGATAGATGACTCTGATGATGAAGTCGAGGAATTCATGGTAACATCTGAAAATTTAACTGAGGGAATAAAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110325.8 ENSMUST00000143398.3 ENSMUST00000152210.2 |
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