Pregenerated sensors for TMEM87A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033808Ensembl transcript IDs: ENSMUST00000090042.12, ENSMUST00000090046.12, ENSMUST00000110729.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGCCGGTAGGTTTTTCTCATCCCGTGGATATGTTTCAGTAAGCTaGTCTCCTTGGCTGACACCTCTCCCCAGCTCCCATGCACAGAGA | + |
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Preference number: 1 (lower is better) Translates to: EAGRFFSSRGYVSVS*SPWLTPLPSSHAQR Trigger: TCTCTGTGCATGGGAGCTGGGGAGAGGTGTCAGCCAAGGAGAGCAGCTTACTGAAACATATCCACGGGATGAGAAAAACCTACCGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR CCA 90 bp | CACGTACACAGAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATaGCATGAAGGGAAACCAAGCATGGCCTGTGACTGCAATGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: HVHRVPLGIWCNPKE*HEGKPSMACDCNAA Trigger: GGCAGCATTGCAGTCACAGGCCATGCTTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR CCA 90 bp | AGGTTTTTCTCATCCCGTGGATATGTTTCAGTAAGCTGCTCTCCTTaGCTGACACCTCTCCCCAGCTCCCATGCACAGAGATCAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: RFFSSRGYVSVSCSP*LTPLPSSHAQRSGT Trigger: TGTTCCTGATCTCTGTGCATGGGAGCTGGGGAGAGGTGTCAGCCAAGGAGAGCAGCTTACTGAAACATATCCACGGGATGAGAAAAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR TCA 90 bp | CAGATGTCATTGCCTCCTTTAATCCCACGGAGCAGTGCAGAAGACTaGCACGCAAGCTGTCTCTTCCCTGATACAAGCCATCTTCTATGG | + |
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Preference number: 1 (lower is better) Translates to: QMSLPPLIPRSSAED*HASCLFPDTSHLLW Trigger: CCATAGAAGATGGCTTGTATCAGGGAAGAGACAGCTTGCGTGTCAGTCTTCTGCACTGCTCCGTGGGATTAAAGGAGGCAATGACATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR GCA 90 bp | GATAATCCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTaGCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: DNPSCRANNHSTYTE*LLASGVIPKNGMKG Trigger: TCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGGATTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR TCA 90 bp | AAATCACAGGCAGTTGCTCCTAGAGATGACAAATTATGGTGTAAATaGCACAGTCCTTTCATAAACTTTAAACTTCCTAGTTTGACAGAT | + |
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Preference number: 1 (lower is better) Translates to: KSQAVAPRDDKLWCK*HSPFINFKLPSLTD Trigger: ATCTGTCAAACTAGGAAGTTTAAAGTTTATGAAAGGACTGTGTCATTTACACCATAATTTGTCATCTCTAGGAGCAACTGCCTGTGATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTTGGCATCTGTAAGCTGCTCTCCTTaGCTGACACCTCTCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PSCRANNHSTYTECLLASVSCSP*LTPLPS Trigger: GCTGGGGAGAGGTGTCAGCCAAGGAGAGCAGCTTAC...AGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR GCA 90 bp | CCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTTGGCATCTAATCCCACGGAGCAGTaGAGAAGACTGACACGCAAG | + |
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Preference number: 2 (lower is better) Translates to: PSCRANNHSTYTECLLASNPTEQ*RRLTRK Trigger: CTTGCGTGTCAGTCTTCTGCACTGCTCCGTGGGATT...AGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTTGGCATCTTCCCAAAGAATGGCATaGAGGGAAACCAAGCATGGC | + |
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Preference number: 2 (lower is better) Translates to: PSCRANNHSTYTECLLASSQRMA*RETKHG Trigger: GCCATGCTTGGTTTCCCTTCATGCCATTCTTTGGGA...AGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAGTAAGCTGCTCTCCTTaGCTGACACCTCTCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: ECLLASGVIPKNGMKGNQVSCSP*LTPLPS Trigger: GCTGGGGAGAGGTGTCAGCCAAGGAGAGCAGCTTAC...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTTGGCATCTCTGCAATGCTGCCCTTaGAGGCTGACTAAATGGTAC | + |
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Preference number: 2 (lower is better) Translates to: PSCRANNHSTYTECLLASLQCCP*RLTKWY Trigger: GTACCATTTAGTCAGCCTCCAAGGGCAGCATTGCAG...AGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR GCA 90 bp | TGTAAGTTTCTCTCGCTTTCTGCCCACCCCATTCCCTCTTGGTCACTGATAGATAATCCCACGGAGCAGTaGAGAAGACTGACACGCAAG | + |
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Preference number: 2 (lower is better) Translates to: CKFLSLSAHPIPSWSLIDNPTEQ*RRLTRK Trigger: CTTGCGTGTCAGTCTTCTGCACTGCTCCGTGGGATT...ATCTATCAGTGACCAAGAGGGAATGGGGTGGGCAGAAAGCGAGAGAAACTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR GCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAATCTCCCCAGCTCCCATaGACAGAGATCAGGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: ECLLASGVIPKNGMKGNQSPQLP*TEIRNR Trigger: TCTGTTCCTGATCTCTGTGCATGGGAGCTGGGGAGA...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAGCATGGTCTCCCCAGCTCCCATaGACAGAGATCAGGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: LLASGVIPKNGMKGNQAWSPQLP*TEIRNR Trigger: TCTGTTCCTGATCTCTGTGCATGGGAGCTGGGGAGA...CCATGCTTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR GCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAATATGTTTCAGTAAGCTaGTCTCCTTGGCTGACACCT | + |
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Preference number: 2 (lower is better) Translates to: ECLLASGVIPKNGMKGNQYVSVS*SPWLTP Trigger: AGGTGTCAGCCAAGGAGAGCAGCTTACTGAAACATA...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CCA 90 bp | GTACACAGAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGTGGAGGCTGACTAAATaGTACTTAAAAGTTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VHRVPLGIWCNPKEWHEGWRLTK*YLKVLE Trigger: CTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCA...CCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAATGGAGGCTGACTAAATaGTACTTAAAAGTTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ECLLASGVIPKNGMKGNQWRLTK*YLKVLE Trigger: CTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCA...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CCA 90 bp | CAATGCTGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTTGGAGTGTGCAGTTTTTCTCATCCCGTaGATATGTTTCAGTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: QCCPWRLTKWYLKVLECAVFLIP*ICFSKL Trigger: CAGCTTACTGAAACATATCCACGGGATGAGAAAAAC...TGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCAGCATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CAA 90 bp | CCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTTGGCATCTAGTAAGCTGCTCTCCTaGGCTGACACCTCTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: PSCRANNHSTYTECLLASSKLLS*ADTSPQ Trigger: CTGGGGAGAGGTGTCAGCCAAGGAGAGCAGCTTACT...AGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR TCA 72 bp | CAACGGGACCTGTCCCCTCTCTGTAAGCTCCCCTTCTaGAGCATGATAATCCCTCTTGCAGGGCGAATAATC | + |
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Preference number: 3 (lower is better) Translates to: QRDLSPLCKLPF*SMIIPLAGRII Trigger: GATTATTCGCCCTGCAAGAGGGATTATCATGCTTCAGAAGGGGAGCTTACAGAGAGGGGACAGGTCCCGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CAA 90 bp | GTACACAGAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGGGAGTGTGCACCACATaGCCAGCAATGGGATGTGTC | + |
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Preference number: 3 (lower is better) Translates to: VHRVPLGIWCNPKEWHEGGVCTT*PAMGCV Trigger: GACACATCCCATTGCTGGCAATGTGGTGCACACTCC...CCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR TCA 72 bp | TTGCCTCCTTTAATCCCACGGAGCAGTGCAGAAGACTaGCACGCAAGCTGTCTCTTCCCTGATACAAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: LPPLIPRSSAED*HASCLFPDTSH Trigger: ATGGCTTGTATCAGGGAAGAGACAGCTTGCGTGTCAGTCTTCTGCACTGCTCCGTGGGATTAAAGGAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR GCA 72 bp | TCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTaGCTCTTGGCATCTGGTGTAATCCCAAAGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: SCRANNHSTYTE*LLASGVIPKNG Trigger: GCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR TCA 72 bp | GTTCAGGGACAACATGTAGCTTGCAAAAACAGCTGTTaGTGGGGTTGGGAGGGAAAGGGTGTCGATGATGTA | + |
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Preference number: 3 (lower is better) Translates to: VQGQHVACKNSC*WGWEGKGVDDV Trigger: TACATCATCGACACCCTTTCCCTCCCAACCCCATCAACAGCTGTTTTTGCAAGCTACATGTTGTCCCTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CAA 90 bp | CTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAGCATGGTTGCAAAAACAGCTGTaGATGGGGTTGGGAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LLASGVIPKNGMKGNQAWLQKQL*MGLGGK Trigger: TTTCCCTCCCAACCCCATCAACAGCTGTTTTTGCAA...CCATGCTTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CAA 90 bp | TACACAGAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAGGGACAACATGTAGCTaGCAAAAACAGCTGTTGATG | + |
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Preference number: 3 (lower is better) Translates to: YTECLLASGVIPKNGMKGGTTCS*QKQLLM Trigger: CATCAACAGCTGTTTTTGCAAGCTACATGTTGTCCC...TCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CAA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAGGGACAACATGTAGCTaGCAAAAACAGCTGTTGATG | + |
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Preference number: 3 (lower is better) Translates to: ECLLASGVIPKNGMKGNQGTTCS*QKQLLM Trigger: CATCAACAGCTGTTTTTGCAAGCTACATGTTGTCCC...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR TCA 72 bp | CAGTGCAGAAGACTGACACGCAAGCTGTCTCTTCCCTaGTACAAGCCATCTTCTATGGCAGTTTCCCATTAT | + |
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Preference number: 3 (lower is better) Translates to: QCRRLTRKLSLP*YKPSSMAVSHY Trigger: ATAATGGGAAACTGCCATAGAAGATGGCTTGTATCAGGGAAGAGACAGCTTGCGTGTCAGTCTTCTGCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CAA 90 bp | CAATGCTGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTTGGAGTGTGCACCACCCCATTCCCTCTaGGTCACTGATAGATCTATA | + |
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Preference number: 3 (lower is better) Translates to: QCCPWRLTKWYLKVLECAPPHSL*VTDRSI Trigger: TATAGATCTATCAGTGACCAAGAGGGAATGGGGTGG...TGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCAGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CAA 90 bp | ACCACATTGCCAGCAATGGGATGTGTCATAATATCAGATGTCAGAAGAGTTAGTTTGCAAAAACAGCTGTaGATGGGGTTGGGAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: TTLPAMGCVIISDVRRVSLQKQL*MGLGGK Trigger: TTTCCCTCCCAACCCCATCAACAGCTGTTTTTGCAA...ACTAACTCTTCTGACATCTGATATTATGACACATCCCATTGCTGGCAATGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR-3UTR CAA 90 bp | CAATGCTGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTTGGAGTGTGCACTGCAAGATGTAATCTaGACTTCTCAGGAAACTCAA | + |
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Preference number: 3 (lower is better) Translates to: QCCPWRLTKWYLKVLECALQDVI*TSQETQ Trigger: TTGAGTTTCCTGAGAAGTCAAGATTACATCTTGCAG...TGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCAGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR TCA 90 bp | CAGAAGACTGACACGCAAGCTGTCTCTTCCCTGATACAAGCCATCTTCTATGGCATAACAGGAGACACCTaGAGCCACGCAGCCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: QKTDTQAVSSLIQAIFYGITGDT*SHAATA Trigger: GGCGGTGGCTGCGTGGCTTCAGGTGTCTCCTGTTAT...GCCATAGAAGATGGCTTGTATCAGGGAAGAGACAGCTTGCGTGTCAGTCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR CAA 72 bp | CCAGCTCCCATGCACAGAGATCAGGAACAGATGTCATaGCCTCCTTTAATCCCACGGAGCAGTGCAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: PAPMHRDQEQMS*PPLIPRSSAED Trigger: GTCTTCTGCACTGCTCCGTGGGATTAAAGGAGGCAATGACATCTGTTCCTGATCTCTGTGCATGGGAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR TCA 90 bp | GTCGATGATGTAAAGAAGCCGGTAGGTTTTTCTCATCCCGTGGATATGTTTCAGATAACAGGAGACACCTaGAGCCACGCAGCCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: VDDVKKPVGFSHPVDMFQITGDT*SHAATA Trigger: GGCGGTGGCTGCGTGGCTTCAGGTGTCTCCTGTTAT...CTGAAACATATCCACGGGATGAGAAAAACCTACCGGCTTCTTTACATCATCGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR TCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAGCCACCACAACCTTGTaGAGAGTGACTCCAAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ECLLASGVIPKNGMKGNQATTTL*RVTPRR Trigger: TCGCCTTGGAGTCACTCTTCACAAGGTTGTGGTGGC...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR CCA 90 bp | CCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTTGGCATCTACAGCAATCTCCAAATaGCATCATCTACCCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSCRANNHSTYTECLLASTAISK*HHLPTA Trigger: AGCTGTGGGTAGATGATGCCATTTGGAGATTGCTGT...AGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR CCA 90 bp | TGTAAGTTTCTCTCGCTTTCTGCCCACCCCATTCCCTCTTGGTCACTGATAGATGAAGCAAGATCAGTCTaGGCCCCTGTAACTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: CKFLSLSAHPIPSWSLIDEARSV*APVTLR Trigger: CCTCAGAGTTACAGGGGCCCAGACTGATCTTGCTTC...ATCTATCAGTGACCAAGAGGGAATGGGGTGGGCAGAAAGCGAGAGAAACTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090042.12 |
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| CDS-3UTR TCA 90 bp | CAATGCTGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTTGGAGTGTGCAGCCACCACAACCTTGTaGAGAGTGACTCCAAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: QCCPWRLTKWYLKVLECAATTTL*RVTPRR Trigger: TCGCCTTGGAGTCACTCTTCACAAGGTTGTGGTGGC...TGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCAGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR GCA 90 bp | CCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTTGGCATCTATGTATGGAGCATCTTaGCAAGTCTGCAATGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PSCRANNHSTYTECLLASMYGAS*QVCNGS Trigger: TGAACCATTGCAGACTTGGCAAGATGCTCCATACAT...AGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR CCA 90 bp | CCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTTGGCATCTAGGACCAAGGCATTCTaGACAGATTCTCCTTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: PSCRANNHSTYTECLLASRTKAF*TDSPLY Trigger: ATACAAAGGAGAATCTGTCCAGAATGCCTTGGTCCT...AGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR CCA 90 bp | CTCATCCCGTGGATATGTTTCAGTAAGCTGCTCTCCTTGGCTGACACCTCTCCCAGGACCAAGGCATTCTaGACAGATTCTCCTTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: LIPWICFSKLLSLADTSPRTKAF*TDSPLY Trigger: ATACAAAGGAGAATCTGTCCAGAATGCCTTGGTCCT...GGGAGAGGTGTCAGCCAAGGAGAGCAGCTTACTGAAACATATCCACGGGATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| 3UTR CAA 72 bp | AGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTaGGCATCTGGTGTAATCCCAAAGAATGGCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: RANNHSTYTECL*ASGVIPKNGMK Trigger: CTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR GCA 90 bp | CTCATCCCGTGGATATGTTTCAGTAAGCTGCTCTCCTTGGCTGACACCTCTCCCGTCTGCAATGGTTCATaGATTGCAATTTTGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LIPWICFSKLLSLADTSPVCNGS*IAILSP Trigger: TGGAGACAAAATTGCAATGCATGAACCATTGCAGAC...GGGAGAGGTGTCAGCCAAGGAGAGCAGCTTACTGAAACATATCCACGGGATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR CCA 90 bp | CTCATCCCGTGGATATGTTTCAGTAAGCTGCTCTCCTTGGCTGACACCTCTCCCTTTACTAGTCCCATTTaGTTCCTGCTTGGTACTTCT | + |
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Preference number: 4 (lower is better) Translates to: LIPWICFSKLLSLADTSPFTSPI*FLLGTS Trigger: AGAAGTACCAAGCAGGAACCAAATGGGACTAGTAAA...GGGAGAGGTGTCAGCCAAGGAGAGCAGCTTACTGAAACATATCCACGGGATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
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| CDS-3UTR TCA 90 bp | CAGAAGACTGACACGCAAGCTGTCTCTTCCCTGATACAAGCCATCTTCTATGGCGCACCAATCCAAAATTaGATTCTCAGGAGATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKTDTQAVSSLIQAIFYGAPIQN*ILRRSL Trigger: GAGAGATCTCCTGAGAATTCAATTTTGGATTGGTGC...GCCATAGAAGATGGCTTGTATCAGGGAAGAGACAGCTTGCGTGTCAGTCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR TCA 90 bp | CTCATCCCGTGGATATGTTTCAGTAAGCTGCTCTCCTTGGCTGACACCTCTCCCTACTATCAGAGCCAATaGGTAAGAAAAATACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIPWICFSKLLSLADTSPYYQSQ*VRKIPC Trigger: ACAGGGTATTTTTCTTACTCATTGGCTCTGATAGTA...GGGAGAGGTGTCAGCCAAGGAGAGCAGCTTACTGAAACATATCCACGGGATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090046.12 |
||
| CDS-3UTR TCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAACCTTTCAAAGTGTGTaGTCATTCGTTCCTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECLLASGVIPKNGMKGNQTFQSV*SFVPRL Trigger: CAGACGAGGAACGAATGATCACACACTTTGAAAGGT...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTTTCTCTCGCTTTCTGCCCACCCCATTCCCTCTTGGTCACTGATAGATGCATCTTGCCAAGTCTaGAATGGTTCATGCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKFLSLSAHPIPSWSLIDASCQV*NGSCIA Trigger: TGCAATGCATGAACCATTGCAGACTTGGCAAGATGC...ATCTATCAGTGACCAAGAGGGAATGGGGTGGGCAGAAAGCGAGAGAAACTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | CTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAGCATGGGCATCTTGCCAAGTCTaGAATGGTTCATGCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLASGVIPKNGMKGNQAWASCQV*NGSCIA Trigger: TGCAATGCATGAACCATTGCAGACTTGGCAAGATGC...CCATGCTTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CCA 90 bp | CCCTCTTGCAGGGCGAATAATCACAGCACGTACACAGAGTGCCTCTTGGCATCTTTGCCAAGTCTGCAATaGTTCATGCATTGCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSCRANNHSTYTECLLASLPSLQ*FMHCNF Trigger: AAAATTGCAATGCATGAACCATTGCAGACTTGGCAA...AGATGCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAACAGCAATCTCCAAATaGCATCATCTACCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ECLLASGVIPKNGMKGNQTAISK*HHLPTA Trigger: AGCTGTGGGTAGATGATGCCATTTGGAGATTGCTGT...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| 3UTR CAA 72 bp | TGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTaGGAGTGTGCACCACATTGCCAGCAATGGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: CPWRLTKWYLKV*ECAPHCQQWDV Trigger: CACATCCCATTGCTGGCAATGTGGTGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR TCA 90 bp | CAATGCTGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTTGGAGTGTGCAGGCAAGTCACTATTCTaGACTTCATGGTCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCCPWRLTKWYLKVLECAGKSLF*TSWSSR Trigger: TCTGGACGACCATGAAGTTCAGAATAGTGACTTGCC...TGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCAGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | CTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAGCATGGATGTATGGAGCATCTTaGCAAGTCTGCAATGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLASGVIPKNGMKGNQAWMYGAS*QVCNGS Trigger: TGAACCATTGCAGACTTGGCAAGATGCTCCATACAT...CCATGCTTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | GTCGATGATGTAAAGAAGCCGGTAGGTTTTTCTCATCCCGTGGATATGTTTCAGAATACAGGCATCAATTaGAGAGAGGGCCAGGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VDDVKKPVGFSHPVDMFQNTGIN*REGQAY Trigger: GTAAGCCTGGCCCTCTCTGCAATTGATGCCTGTATT...CTGAAACATATCCACGGGATGAGAAAAACCTACCGGCTTCTTTACATCATCGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090046.12 |
||
| CDS-3UTR CCA 90 bp | GTACACAGAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGCACGATAAAAATGTATaGAGCATCTTGCCAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHRVPLGIWCNPKEWHEGHDKNV*SILPSL Trigger: CAGACTTGGCAAGATGCTCCATACATTTTTATCGTG...CCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CCA 90 bp | CAGAAGACTGACACGCAAGCTGTCTCTTCCCTGATACAAGCCATCTTCTATGGCCACGATAAAAATGTATaGAGCATCTTGCCAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKTDTQAVSSLIQAIFYGHDKNV*SILPSL Trigger: CAGACTTGGCAAGATGCTCCATACATTTTTATCGTG...GCCATAGAAGATGGCTTGTATCAGGGAAGAGACAGCTTGCGTGTCAGTCTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR TCA 90 bp | GTACACAGAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGGAGATTTTCCAAGTATaGCTCTATTTCATCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHRVPLGIWCNPKEWHEGEIFQV*LYFICL Trigger: AAGGCAGATGAAATAGAGTCATACTTGGAAAATCTC...CCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR TCA 90 bp | CAATGCTGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTTGGAGTGTGCAACCTTTCAAAGTGTGTaGTCATTCGTTCCTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCCPWRLTKWYLKVLECATFQSV*SFVPRL Trigger: CAGACGAGGAACGAATGATCACACACTTTGAAAGGT...TGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCAGCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAACCCAGAAAAGCTCTGTaGTTTATAGAGTTCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: ECLLASGVIPKNGMKGNQPRKAL*FIEFTT Trigger: TGTAGTGAACTCTATAAAGCACAGAGCTTTTCTGGG...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAGTCTGCAATGGTTCATaGATTGCAATTTTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ECLLASGVIPKNGMKGNQVCNGS*IAILSP Trigger: TGGAGACAAAATTGCAATGCATGAACCATTGCAGAC...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | TACACAGAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAGACGAGATGCCAACATaGACGATAAAAATGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTECLLASGVIPKNGMKGDEMPT*TIKMYG Trigger: TCCATACATTTTTATCGTGCATGTTGGCATCTCGTC...TCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | CTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAGCATGGGACGAGATGCCAACATaGACGATAAAAATGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLASGVIPKNGMKGNQAWDEMPT*TIKMYG Trigger: TCCATACATTTTTATCGTGCATGTTGGCATCTCGTC...CCATGCTTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAAATCTTGATGATGTTTaGTATCTCCCAGACAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECLLASGVIPKNGMKGNQNLDDV*YLPDKP Trigger: AGGCTTGTCTGGGAGATACCAAACATCATCAAGATT...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAATTTACTAGTCCCATTTaGTTCCTGCTTGGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ECLLASGVIPKNGMKGNQFTSPI*FLLGTS Trigger: AGAAGTACCAAGCAGGAACCAAATGGGACTAGTAAA...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR TCA 90 bp | TACACAGAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAACATTCCAAGAAAGATaGCAGCACCAATCCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: YTECLLASGVIPKNGMKGTFQER*QHQSKI Trigger: AATTTTGGATTGGTGCTGTCATCTTTCTTGGAATGT...TCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR TCA 90 bp | ACCACATTGCCAGCAATGGGATGTGTCATAATATCAGATGTCAGAAGAGTTAGTGGCAAGTCACTATTCTaGACTTCATGGTCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTLPAMGCVIISDVRRVSGKSLF*TSWSSR Trigger: TCTGGACGACCATGAAGTTCAGAATAGTGACTTGCC...ACTAACTCTTCTGACATCTGATATTATGACACATCCCATTGCTGGCAATGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | CAATGCTGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTTGGAGTGTGCACCCAGAAAAGCTCTGTaGTTTATAGAGTTCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: QCCPWRLTKWYLKVLECAPRKAL*FIEFTT Trigger: TGTAGTGAACTCTATAAAGCACAGAGCTTTTCTGGG...TGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCAGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR GCA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAACAATGGTTCATGCATTaGAATTTTGTCTCCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ECLLASGVIPKNGMKGNQQWFMH*NFVSSK Trigger: TTTACTGGAGACAAAATTGCAATGCATGAACCATTG...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR TCA 90 bp | GTCGATGATGTAAAGAAGCCGGTAGGTTTTTCTCATCCCGTGGATATGTTTCAGGAGATTTTCCAAGTATaGCTCTATTTCATCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VDDVKKPVGFSHPVDMFQEIFQV*LYFICL Trigger: AAGGCAGATGAAATAGAGTCATACTTGGAAAATCTC...CTGAAACATATCCACGGGATGAGAAAAACCTACCGGCTTCTTTACATCATCGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR TCA 90 bp | GTCGATGATGTAAAGAAGCCGGTAGGTTTTTCTCATCCCGTGGATATGTTTCAGACATTCCAAGAAAGATaGCAGCACCAATCCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: VDDVKKPVGFSHPVDMFQTFQER*QHQSKI Trigger: AATTTTGGATTGGTGCTGTCATCTTTCTTGGAATGT...CTGAAACATATCCACGGGATGAGAAAAACCTACCGGCTTCTTTACATCATCGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CCA 90 bp | CAATGCTGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTTGGAGTGTGCAGTTATATTTAAAGACTaGTCACAAGGCTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QCCPWRLTKWYLKVLECAVIFKD*SQGSPS Trigger: TGATGGAGAGCCTTGTGACCAGTCTTTAAATATAAC...TGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCAGCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CCA 90 bp | GTCGATGATGTAAAGAAGCCGGTAGGTTTTTCTCATCCCGTGGATATGTTTCAGGTTATATTTAAAGACTaGTCACAAGGCTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VDDVKKPVGFSHPVDMFQVIFKD*SQGSPS Trigger: TGATGGAGAGCCTTGTGACCAGTCTTTAAATATAAC...CTGAAACATATCCACGGGATGAGAAAAACCTACCGGCTTCTTTACATCATCGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CCA 90 bp | ACCACATTGCCAGCAATGGGATGTGTCATAATATCAGATGTCAGAAGAGTTAGTAATCTTGATGATGTTTaGTATCTCCCAGACAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTLPAMGCVIISDVRRVSNLDDV*YLPDKP Trigger: AGGCTTGTCTGGGAGATACCAAACATCATCAAGATT...ACTAACTCTTCTGACATCTGATATTATGACACATCCCATTGCTGGCAATGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CAA 90 bp | CTCATCCCGTGGATATGTTTCAGTAAGCTGCTCTCCTTGGCTGACACCTCTCCCCCATTTGGTTCCTGCTaGGTACTTCTCATTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LIPWICFSKLLSLADTSPPFGSC*VLLIFI Trigger: AATGAAAATGAGAAGTACCAAGCAGGAACCAAATGG...GGGAGAGGTGTCAGCCAAGGAGAGCAGCTTACTGAAACATATCCACGGGATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CAA 90 bp | CAATGCTGCCCTTGGAGGCTGACTAAATGGTACTTAAAAGTTTTGGAGTGTGCACAAACCTCTGGTTATTaGCTGATGGCCGCCAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QCCPWRLTKWYLKVLECAQTSGY*LMAAKE Trigger: TTCTTTGGCGGCCATCAGCAAATAACCAGAGGTTTG...TGCACACTCCAAAACTTTTAAGTACCATTTAGTCAGCCTCCAAGGGCAGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CAA 90 bp | GTACACAGAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGCCATTTGGTTCCTGCTaGGTACTTCTCATTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VHRVPLGIWCNPKEWHEGPFGSC*VLLIFI Trigger: AATGAAAATGAGAAGTACCAAGCAGGAACCAAATGG...CCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTCTGTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CAA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAAAGCACCAATCCAAAATaGAATTCTCAGGAGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ECLLASGVIPKNGMKGNQSTNPK*NSQEIS Trigger: AGAGATCTCCTGAGAATTCAATTTTGGATTGGTGCT...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTTTCTCTCGCTTTCTGCCCACCCCATTCCCTCTTGGTCACTGATAGATAGCACCAATCCAAAATaGAATTCTCAGGAGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CKFLSLSAHPIPSWSLIDSTNPK*NSQEIS Trigger: AGAGATCTCCTGAGAATTCAATTTTGGATTGGTGCT...ATCTATCAGTGACCAAGAGGGAATGGGGTGGGCAGAAAGCGAGAGAAACTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS GCA 90 bp | GAGGACGAGATGCCAACATGCACGATAAAAATGTATGGAGCATCTTaGCAAGTCTGCAATGGTTCATGCATTGCAATTTTGTCTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: EDEMPTCTIKMYGAS*QVCNGSCIAILSPV Trigger: TACTGGAGACAAAATTGCAATGCATGAACCATTGCAGACTTGGCAAGATGCTCCATACATTTTTATCGTGCATGTTGGCATCTCGTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGCCTCTTGGCATCTGGTGTAATCCCAAAGAATGGCATGAAGGGAAACCAATCATGCATTGCAATTTaGTCTCCAGTAAAGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: ECLLASGVIPKNGMKGNQSCIAI*SPVKVT Trigger: TGTTACCTTTACTGGAGACAAAATTGCAATGCATGA...TTGGTTTCCCTTCATGCCATTCTTTGGGATTACACCAGATGCCAAGAGGCACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTTTCTCTCGCTTTCTGCCCACCCCATTCCCTCTTGGTCACTGATAGATTCATGCATTGCAATTTaGTCTCCAGTAAAGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: CKFLSLSAHPIPSWSLIDSCIAI*SPVKVT Trigger: TGTTACCTTTACTGGAGACAAAATTGCAATGCATGA...ATCTATCAGTGACCAAGAGGGAATGGGGTGGGCAGAAAGCGAGAGAAACTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS GCA 90 bp | ATGCCAACATGCACGATAAAAATGTATGGAGCATCTTGCCAAGTCTaGAATGGTTCATGCATTGCAATTTTGTCTCCAGTAAAGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: MPTCTIKMYGASCQV*NGSCIAILSPVKVT Trigger: TGTTACCTTTACTGGAGACAAAATTGCAATGCATGAACCATTGCAGACTTGGCAAGATGCTCCATACATTTTTATCGTGCATGTTGGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
||
| CDS TCA 90 bp | GAAATTCTGCATAAAACACAGCTTTCTCAAACATTCCAAGAAAGATaGCAGCACCAATCCAAAATTGAATTCTCAGGAGATCTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EILHKTQLSQTFQER*QHQSKIEFSGDLSS Trigger: ACTGGAGAGATCTCCTGAGAATTCAATTTTGGATTGGTGCTGTCATCTTTCTTGGAATGTTTGAGAAAGCTGTGTTTTATGCAGAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
||
| CDS CCA 90 bp | TTTCAAATCATCTTCCTGTGCTTTGTTTACTTTACTAGTCCCATTTaGTTCCTGCTTGGTACTTCTCATTTTCATTCCTTCAAAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQIIFLCFVYFTSPI*FLLGTSHFHSFKAF Trigger: GAAAGCTTTGAAGGAATGAAAATGAGAAGTACCAAGCAGGAACCAAATGGGACTAGTAAAGTAAACAAAGCACAGGAAGATGATTTGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 |
||
| CDS GCA 72 bp | CCCCGACGGCATCGGAATGTGCCACTTCGATCTATCTaGAGCAAACACGGGTGCCGGACCTGCACCAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PRRHRNVPLRSI*SKHGCRTCTKK Trigger: TTTCTTGGTGCAGGTCCGGCACCCGTGTTTGCTGCAGATAGATCGAAGTGGCACATTCCGATGCCGTCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
||
| CDS CAA 90 bp | CAGATGATGAACACAATAGACGCTGCCACTGCCAAGATAAGCGTATaGGTGAAATGTCGGTACAAAGAGAGCTTTACAATGTTCCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: QMMNTIDAATAKISV*VKCRYKESFTMFLR Trigger: TCGGAGGAACATTGTAAAGCTCTCTTTGTACCGACATTTCACCAATACGCTTATCTTGGCAGTGGCAGCGTCTATTGTGTTCATCATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
||
| CDS GCA 72 bp | TCTTTTGGTGATTCCTTTGAGGACGAGATGCCAACATaGACGATAAAAATGTATGGAGCATCTTGCCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SFGDSFEDEMPT*TIKMYGASCQV Trigger: GACTTGGCAAGATGCTCCATACATTTTTATCGTGCATGTTGGCATCTCGTCCTCAAAGGAATCACCAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
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| CDS CAA 72 bp | AACACAATAGACGCTGCCACTGCCAAGATAAGCGTATaGGTGAAATGTCGGTACAAAGAGAGCTTTACAATG | + |
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Preference number: 6 (lower is better) Translates to: NTIDAATAKISV*VKCRYKESFTM Trigger: CATTGTAAAGCTCTCTTTGTACCGACATTTCACCAATACGCTTATCTTGGCAGTGGCAGCGTCTATTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
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| CDS TCA 72 bp | ACAATGTTCCTCCGAAGTTTTAATAGCTTCATGGTTTaGGTTAAGCTAATGAATATCCACCAGCACAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TMFLRSFNSFMV*VKLMNIHQHRA Trigger: TGCCCTGTGCTGGTGGATATTCATTAGCTTAACTCAAACCATGAAGCTATTAAAACTTCGGAGGAACATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090042.12 |
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| CDS GCA 72 bp | TGCACGATAAAAATGTATGGAGCATCTTGCCAAGTCTaGAATGGTTCATGCATTGCAATTTTGTCTCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: CTIKMYGASCQV*NGSCIAILSPV Trigger: TACTGGAGACAAAATTGCAATGCATGAACCATTGCAGACTTGGCAAGATGCTCCATACATTTTTATCGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
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| CDS GCA 72 bp | ATGCCAACATGCACGATAAAAATGTATGGAGCATCTTaGCAAGTCTGCAATGGTTCATGCATTGCAATTTTG | + |
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Preference number: 6 (lower is better) Translates to: MPTCTIKMYGAS*QVCNGSCIAIL Trigger: CAAAATTGCAATGCATGAACCATTGCAGACTTGGCAAGATGCTCCATACATTTTTATCGTGCATGTTGGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
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| CDS GCA 72 bp | ATGTATGGAGCATCTTGCCAAGTCTGCAATGGTTCATaGATTGCAATTTTGTCTCCAGTAAAGGTAACATTT | + |
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Preference number: 6 (lower is better) Translates to: MYGASCQVCNGS*IAILSPVKVTF Trigger: AAATGTTACCTTTACTGGAGACAAAATTGCAATGCATGAACCATTGCAGACTTGGCAAGATGCTCCATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
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| CDS TCA 72 bp | CATAAAACACAGCTTTCTCAAACATTCCAAGAAAGATaGCAGCACCAATCCAAAATTGAATTCTCAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: HKTQLSQTFQER*QHQSKIEFSGD Trigger: ATCTCCTGAGAATTCAATTTTGGATTGGTGCTGTCATCTTTCTTGGAATGTTTGAGAAAGCTGTGTTTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
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| CDS CAA 72 bp | GTGCTTTATAGAGTTCACTACAGTTCTGAAATAATCTaGATGATGTTTGGTATCTCCCAGACAAGCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLYRVHYSSEII*MMFGISQTSLF Trigger: AAAAAGGCTTGTCTGGGAGATACCAAACATCATCAAGATTATTTCAGAACTGTAGTGAACTCTATAAAGCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090042.12 ENSMUST00000090046.12 ENSMUST00000110729.2 |
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