Pregenerated sensors for TMEM86B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045282Ensembl transcript IDs: ENSMUST00000055085.8, ENSMUST00000205360.2, ENSMUST00000206610.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGTAGCAGGAGGAAGCTGTAGTATGTCAGAGAGGCCAAGGTGGTaGACAGCAGCAATCCGGGCTGCAGTGGGGTCAGGCCAAAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GVAGGSCSMSERPRW*TAAIRAAVGSGQKP Trigger: GGGCTTTTGGCCTGACCCCACTGCAGCCCGGATTGCTGCTGTGCACCACCTTGGCCTCTCTGACATACTACAGCTTCCTCCTGCTACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| 3UTR TCA 90 bp | CAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCATATaGCTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGGAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: QQYTDVKDGHISVSI*LEAFTCQAGSVWKA Trigger: GGCTTTCCACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR CCA 90 bp | AGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCATATGACTaGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGGAAAGCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: SIQMLKMATYLSAYD*KHSLARLGQCGKPR Trigger: CCTTGGCTTTCCACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATGTGGCCATCTTTAACATCTGTATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR GCA 90 bp | GAAGCCAGGGAAGGCAGTTTGAAATCAGTGGTAGATCTGAAATTCTaGCAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: EAREGSLKSVVDLKF*QQYTDVKDGHISVS Trigger: GCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATTTCAGATCTACCACTGATTTCAAACTGCCTTCCCTGGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR-3UTR GCA 90 bp | AAATCAGTGGTAGATCTGAAATTCTGCCAACAGTATACAGATGTTAAAGATGGCCTGGAAGCATTCACTTaGCAGGCTGGGTCAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: KSVVDLKFCQQYTDVKDGLEAFT*QAGSVW Trigger: CCACACTGACCCAGCCTGGCAAGTGAATGCTTCCAG...GCCATCTTTAACATCTGTATACTGTTGGCAGAATTTCAGATCTACCACTGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR-3UTR GCA 90 bp | AATTCTGCCAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCATATCTGGAAGCATTCACTTaGCAGGCTGGGTCAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: NSANSIQMLKMATYLSAYLEAFT*QAGSVW Trigger: CCACACTGACCCAGCCTGGCAAGTGAATGCTTCCAG...ATATGCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR GCA 72 bp | GGAGGAAGCTGTAGTATGTCAGAGAGGCCAAGGTGGTaGACAGCAGCAATCCGGGCTGCAGTGGGGTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: GGSCSMSERPRW*TAAIRAAVGSG Trigger: GCCTGACCCCACTGCAGCCCGGATTGCTGCTGTGCACCACCTTGGCCTCTCTGACATACTACAGCTTCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| 3UTR CCA 72 bp | GCAGGAGGAAGCTGTAGTATGTCAGAGAGGCCAAGGTaGTGCACAGCAGCAATCCGGGCTGCAGTGGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: AGGSCSMSERPR*CTAAIRAAVGS Trigger: TGACCCCACTGCAGCCCGGATTGCTGCTGTGCACCACCTTGGCCTCTCTGACATACTACAGCTTCCTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| 3UTR-3UTR CAA 90 bp | CTCATTTTACTTAAACAGCTAGAACCAGATCTGGAGCAGTGTGAAGGGGCAGGTAGGATATGGGTTGGGTaGAGGGTCCTGGAATCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LILLKQLEPDLEQCEGAGRIWVG*RVLESR Trigger: TCTGGATTCCAGGACCCTCAACCCAACCCATATCCT...ACCTGCCCCTTCACACTGCTCCAGATCTGGTTCTAGCTGTTTAAGTAAAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR TCA 72 bp | ACAGATGTTAAAGATGGCCACATATCTGTCAGCATATaGCTGGAAGCATTCACTTGCCAGGCTGGGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: TDVKDGHISVSI*LEAFTCQAGSV Trigger: CACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATGTGGCCATCTTTAACATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR CCA 72 bp | ATGTTAAAGATGGCCACATATCTGTCAGCATATGACTaGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: MLKMATYLSAYD*KHSLARLGQCG Trigger: TCCACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATGTGGCCATCTTTAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR GCA 72 bp | GAAGGCAGTTTGAAATCAGTGGTAGATCTGAAATTCTaGCAACAGTATACAGATGTTAAAGATGGCCACATA | + |
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Preference number: 3 (lower is better) Translates to: EGSLKSVVDLKF*QQYTDVKDGHI Trigger: TATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATTTCAGATCTACCACTGATTTCAAACTGCCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | CAAGGTGGTGCACAGCAGCAATCCGGGCTGCAGTGGGGTCAGGCCAAAAGCCCCAGGGGGCCAGCCACCTaGGGACCTGTGGGTAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QGGAQQQSGLQWGQAKSPRGPAT*GPVGKV Trigger: AACCTTACCCACAGGTCCGCAGGTGGCTGGCCCCCT...GGGGCTTTTGGCCTGACCCCACTGCAGCCCGGATTGCTGCTGTGCACCACCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGCCAAGGTGGTGCACAGCAGCAATCCGGGCTGCAGTGGGGTCAGGCCAACCACCTGCGGACCTGTaGGTAAGGTTCTCACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ERPRWCTAAIRAAVGSGQPPADL*VRFSLG Trigger: ACCAAGTGAGAACCTTACCCACAGGTCCGCAGGTGG...TTGGCCTGACCCCACTGCAGCCCGGATTGCTGCTGTGCACCACCTTGGCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| CDS-3UTR GCA 90 bp | CAAGGTGTAGCAGGAGGAAGCTGTAGTATGTCAGAGAGGCCAAGGTGGTGCACAGCAGGAGCCAGGTGCTaGTCCCACCAGGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QGVAGGSCSMSERPRWCTAGARC*SHQGPQ Trigger: CTGTGGCCCCTGGTGGGAGCAGCACCTGGCTCCTGC...TGTGCACCACCTTGGCCTCTCTGACATACTACAGCTTCCTCCTGCTACACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| CDS-3UTR GCA 90 bp | CATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGCCTGCAGGAGCCAGGTaGTGCTCCCACCAGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HICQHMTGSIHLPGWVSVPAGAR*CSHQGP Trigger: TGGCCCCTGGTGGGAGCAGCACCTGGCTCCTGCAGG...CACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR CAA 72 bp | TGGGCATGGGGAGGGGAAGACAGGATATGGGTTGGGTaGAGGGTCCTGGAATCCAGAAGAAGCCAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WAWGGEDRIWVG*RVLESRRSQGR Trigger: CCTTCCCTGGCTTCTTCTGGATTCCAGGACCCTCAACCCAACCCATATCCTGTCTTCCCCTCCCCATGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR CCA 90 bp | GGAGGAAGCTGTAGTATGTCAGAGAGGCCAAGGTGGTGCACAGCAGCAATCCGGCTGACCCAAGATGGCTaGTCCACAGGAATCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSCSMSERPRWCTAAIRLTQDG*STGIQR Trigger: CCTCTGGATTCCTGTGGACCAGCCATCTTGGGTCAG...CCGGATTGCTGCTGTGCACCACCTTGGCCTCTCTGACATACTACAGCTTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| CDS-3UTR GCA 90 bp | CATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGAGGGGGCCAGCCACCTaGGGACCTGTGGGTATTGGT | + |
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Preference number: 4 (lower is better) Translates to: HICQHMTGSIHLPGWVSVRGPAT*GPVGIG Trigger: ACCAATACCCACAGGTCCGCAGGTGGCTGGCCCCCT...CACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055085.8 |
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| CDS-3UTR GCA 90 bp | CAAAAGCCCCGAGGTAGAATAAGTGGGCAACAGAGAAGGCTGCCGTGCCATAAACATACAAGAGCTCCCTaGAGGAGCCAGGTGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QKPRGRISGQQRRLPCHKHTRAP*RSQVLL Trigger: GAGCAGCACCTGGCTCCTGCAGGGAGCTCTTGTATG...TTTATGGCACGGCAGCCTTCTCTGTTGCCCACTTATTCTACCTCGGGGCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| CDS-3UTR GCA 90 bp | GCCACATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGAGCAGCAATCCGGGCTaGAGTGGGGTCAGGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: ATYLSAYDWKHSLARLGQSSNPG*SGVRPK Trigger: TTTTGGCCTGACCCCACTGCAGCCCGGATTGCTGCT...CTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR TCA 90 bp | TATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGGAAAGCTTCAGGCCAGATaGGGCAGGCATCTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: YLSAYDWKHSLARLGQCGKLQAR*GRHLPQ Trigger: CTGTGGGAGATGCCTGCCTCATCTGGCCTGAAGCTT...TCCACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | CCACATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGGGCTGCATAGTAGGTaGTCATGGTCACTAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: PHICQHMTGSIHLPGWVSGLHSR*SWSLGG Trigger: CCCGCCTAGTGACCATGAGCACCTACTATGCAGCCC...ACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | CATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGGGGCTGCATAGTAGGTaGTCATGGTCACTAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: HICQHMTGSIHLPGWVSVGLHSR*SWSLGG Trigger: CCCGCCTAGTGACCATGAGCACCTACTATGCAGCCC...CACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | GCCACATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGGAGGAGGAGCTGGGCTaGATAGTAGGTGCTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: ATYLSAYDWKHSLARLGQEEELG*IVGAHG Trigger: ACCATGAGCACCTACTATGCAGCCCAGCTCCTCCTC...CTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| 3UTR CAA 72 bp | CCACATATCTGTCAGCATATGACTGGAAGCATTCACTaGCCAGGCTGGGTCAGTGTGGAAAGCCAAGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PHICQHMTGSIH*PGWVSVESQGP Trigger: GGGACCTTGGCTTTCCACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | CTGAAATTCTGCCAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCGCAGGAGCCAGGTGCTaGTCCCACCAGGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LKFCQQYTDVKDGHISVSAGARC*SHQGPQ Trigger: CTGTGGCCCCTGGTGGGAGCAGCACCTGGCTCCTGC...GCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | CCACATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTTCACGGGCAAGACCATaGCCTGCTCAAGGTGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: PHICQHMTGSIHLPGWVSSRARP*PAQGVA Trigger: TGCTACACCTTGAGCAGGGCATGGTCTTGCCCGTGA...ACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | AGAAGCCAGGGAAGGCAGTTTGAAATCAGTGGTAGATCTGAAATTCTGCCAACAAGGGGGCCAGCCACCTaGGGACCTGTGGGTACTTCA | + |
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Preference number: 4 (lower is better) Translates to: RSQGRQFEISGRSEILPTRGPAT*GPVGTS Trigger: TGAAGTACCCACAGGTCCGCAGGTGGCTGGCCCCCT...TGTTGGCAGAATTTCAGATCTACCACTGATTTCAAACTGCCTTCCCTGGCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205360.2 |
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| CDS-3UTR CCA 90 bp | CATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGCTGACCCAAGATGGCTaGTCCACAGGAATCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: HICQHMTGSIHLPGWVSVLTQDG*STGIQR Trigger: CCTCTGGATTCCTGTGGACCAGCCATCTTGGGTCAG...CACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR CCA 90 bp | CATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGGGCTGCGCCACAGCATaGAGTTCAAGATCAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: HICQHMTGSIHLPGWVSVGCATA*SSRSAH Trigger: ATGGGCTGATCTTGAACTCCATGCTGTGGCGCAGCC...CACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR TCA 90 bp | TATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGGACTGTGGGTATTGGTCTaGAAAGAGTGTCTCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: YLSAYDWKHSLARLGQCGLWVLV*KECLQG Trigger: CCCCTGGAGACACTCTTTTCAGACCAATACCCACAG...TCCACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055085.8 |
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| CDS-3UTR TCA 90 bp | CTCATTTTACTTAAACAGCTAGAACCAGATCTGGAGCAGTGTGAAGGGGCAGGTAAGCTTCAGGCCAGATaGGGCAGGCATCTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LILLKQLEPDLEQCEGAGKLQAR*GRHLPQ Trigger: CTGTGGGAGATGCCTGCCTCATCTGGCCTGAAGCTT...ACCTGCCCCTTCACACTGCTCCAGATCTGGTTCTAGCTGTTTAAGTAAAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR TCA 90 bp | CATATCTGTCAGCATATGACTGGAAGCATTCACTTGCCAGGCTGGGTCAGTGTGGGCCAGCACACCATCTaGGAATGTAAAGAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: HICQHMTGSIHLPGWVSVGQHTI*ECKEHS Trigger: GCTGTGCTCTTTACATTCTCAGATGGTGTGCTGGCC...CACACTGACCCAGCCTGGCAAGTGAATGCTTCCAGTCATATGCTGACAGATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | AGAAGCCAGGGAAGGCAGTTTGAAATCAGTGGTAGATCTGAAATTCTGCCAACAGAGAGGCCAAGGTGGTaGACAGCAGCAATCCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: RSQGRQFEISGRSEILPTERPRW*TAAIRA Trigger: AGCCCGGATTGCTGCTGTGCACCACCTTGGCCTCTC...TGTTGGCAGAATTTCAGATCTACCACTGATTTCAAACTGCCTTCCCTGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR CCA 90 bp | GCAGGAGGAAGCTGTAGTATGTCAGAGAGGCCAAGGTGGTGCACAGCAGCAATCGGTAAGGTTCTCACTTaGTCTGAAAAGAGTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: AGGSCSMSERPRWCTAAIGKVLT*SEKSVS Trigger: GGAGACACTCTTTTCAGACCAAGTGAGAACCTTACC...GATTGCTGCTGTGCACCACCTTGGCCTCTCTGACATACTACAGCTTCCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| CDS-3UTR GCA 90 bp | AAATCAGTGGTAGATCTGAAATTCTGCCAACAGTATACAGATGTTAAAGATGGCGCAGGAGCCAGGTGCTaGTCCCACCAGGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: KSVVDLKFCQQYTDVKDGAGARC*SHQGPQ Trigger: CTGTGGCCCCTGGTGGGAGCAGCACCTGGCTCCTGC...GCCATCTTTAACATCTGTATACTGTTGGCAGAATTTCAGATCTACCACTGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | GAAGAAGCCAGGGAAGGCAGTTTGAAATCAGTGGTAGATCTGAAATTCTGCCAACATACAAGAGCTCCCTaGAGGAGCCAGGTGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: EEAREGSLKSVVDLKFCQHTRAP*RSQVLL Trigger: GAGCAGCACCTGGCTCCTGCAGGGAGCTCTTGTATG...TTGGCAGAATTTCAGATCTACCACTGATTTCAAACTGCCTTCCCTGGCTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGCAGTTTGAAATCAGTGGTAGATCTGAAATTCTGCCAACAGTATACAGAGAGGCCAAGGTGGTaGACAGCAGCAATCCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: REGSLKSVVDLKFCQQYTERPRW*TAAIRA Trigger: AGCCCGGATTGCTGCTGTGCACCACCTTGGCCTCTC...TGTATACTGTTGGCAGAATTTCAGATCTACCACTGATTTCAAACTGCCTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAAGAAGCCAGGGAAGGCAGTTTGAAATCAGTGGTAGATCTGAAATTCTGCTGACCCAAGATGGCTaGTCCACAGGAATCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SRRSQGRQFEISGRSEILLTQDG*STGIQR Trigger: CCTCTGGATTCCTGTGGACCAGCCATCTTGGGTCAG...CAGAATTTCAGATCTACCACTGATTTCAAACTGCCTTCCCTGGCTTCTTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR TCA 90 bp | TCCAGAAGAAGCCAGGGAAGGCAGTTTGAAATCAGTGGTAGATCTGAAATTCTGGGCCAGCACACCATCTaGGAATGTAAAGAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SRRSQGRQFEISGRSEILGQHTI*ECKEHS Trigger: GCTGTGCTCTTTACATTCTCAGATGGTGTGCTGGCC...CAGAATTTCAGATCTACCACTGATTTCAAACTGCCTTCCCTGGCTTCTTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR CCA 90 bp | CTCATTTTACTTAAACAGCTAGAACCAGATCTGGAGCAGTGTGAAGGGGCAGGTCATAGTAGGTGCTCATaGTCACTAGGCGGGCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: LILLKQLEPDLEQCEGAGHSRCS*SLGGQK Trigger: CTTTTGCCCGCCTAGTGACCATGAGCACCTACTATG...ACCTGCCCCTTCACACTGCTCCAGATCTGGTTCTAGCTGTTTAAGTAAAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | CTGAAATTCTGCCAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCGAGGAGGAGCTGGGCTaGATAGTAGGTGCTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: LKFCQQYTDVKDGHISVSEEELG*IVGAHG Trigger: ACCATGAGCACCTACTATGCAGCCCAGCTCCTCCTC...GCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | AAATCAGTGGTAGATCTGAAATTCTGCCAACAGTATACAGATGTTAAAGATGGCCATACAAGAGCTCCCTaGAGGAGCCAGGTGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KSVVDLKFCQQYTDVKDGHTRAP*RSQVLL Trigger: GAGCAGCACCTGGCTCCTGCAGGGAGCTCTTGTATG...GCCATCTTTAACATCTGTATACTGTTGGCAGAATTTCAGATCTACCACTGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | AATTCTGCCAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCATATAGCAGCAATCCGGGCTaGAGTGGGGTCAGGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: NSANSIQMLKMATYLSAYSSNPG*SGVRPK Trigger: TTTTGGCCTGACCCCACTGCAGCCCGGATTGCTGCT...ATATGCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | AAATCAGTGGTAGATCTGAAATTCTGCCAACAGTATACAGATGTTAAAGATGGCCACCCCAGACAAGGCTaGGCCACAGCATGGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: KSVVDLKFCQQYTDVKDGHPRQG*ATAWSS Trigger: TGAACTCCATGCTGTGGCGCAGCCTTGTCTGGGGTG...GCCATCTTTAACATCTGTATACTGTTGGCAGAATTTCAGATCTACCACTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | AATTCTGCCAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCATATCACCCCAGACAAGGCTaGGCCACAGCATGGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: NSANSIQMLKMATYLSAYHPRQG*ATAWSS Trigger: TGAACTCCATGCTGTGGCGCAGCCTTGTCTGGGGTG...ATATGCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR GCA 90 bp | AAATTCTGCCAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCATATCACGGGCAAGACCATaGCCTGCTCAAGGTGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: KFCQQYTDVKDGHISVSISRARP*PAQGVA Trigger: TGCTACACCTTGAGCAGGGCATGGTCTTGCCCGTGA...TATGCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR CCA 90 bp | CTGAAATTCTGCCAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCCATAGTAGGTGCTCATaGTCACTAGGCGGGCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: LKFCQQYTDVKDGHISVSHSRCS*SLGGQK Trigger: CTTTTGCCCGCCTAGTGACCATGAGCACCTACTATG...GCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS-3UTR CCA 90 bp | AATTCTGCCAACAGTATACAGATGTTAAAGATGGCCACATATCTGTCAGCATATCGGACCTGTGGGTATTaGTCTGAAAAGAGTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSANSIQMLKMATYLSAYRTCGY*SEKSVS Trigger: GGAGACACTCTTTTCAGACCAATACCCACAGGTCCG...ATATGCTGACAGATATGTGGCCATCTTTAACATCTGTATACTGTTGGCAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055085.8 |
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| CDS GCA 90 bp | CTCCCACAGCAGAACATACAAGAGCTCCCTGCAGGAGCCAGGTGCTaGTCCCACCAGGGGCCACAGCCCACAGGAACACAACCAGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LPQQNIQELPAGARC*SHQGPQPTGTQPGR Trigger: TCTGCCTGGTTGTGTTCCTGTGGGCTGTGGCCCCTGGTGGGAGCAGCACCTGGCTCCTGCAGGGAGCTCTTGTATGTTCTGCTGTGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 ENSMUST00000206610.2 |
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| CDS CCA 90 bp | CAGGCAGAGAATGGGCTGGCACTTGATCAGGGCACTGACCCAAGATaGCTGGTCCACAGGAATCCAGAGGAGGAAGTAAAGGGAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: QAENGLALDQGTDPR*LVHRNPEEEVKGAG Trigger: GCCTGCTCCCTTTACTTCCTCCTCTGGATTCCTGTGGACCAGCCATCTTGGGTCAGTGCCCTGATCAAGTGCCAGCCCATTCTCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 ENSMUST00000206610.2 |
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| CDS TCA 90 bp | CAACAGAGAAGGCTGCCGTGCCATAAAAGAAAGCTTCAGGCCAGATaGGGCAGGCATCTCCCACAGCAGAACATACAAGAGCTCCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QQRRLPCHKRKLQAR*GRHLPQQNIQELPA Trigger: TGCAGGGAGCTCTTGTATGTTCTGCTGTGGGAGATGCCTGCCTCATCTGGCCTGAAGCTTTCTTTTATGGCACGGCAGCCTTCTCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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| CDS CCA 72 bp | GGCAAGGATGAAGGGGGCCAGCCACCTGCGGACCTGTaGGTAAGGTTCTCACTTGGTCTGAAAAGAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: GKDEGGQPPADL*VRFSLGLKRVS Trigger: AGACACTCTTTTCAGACCAAGTGAGAACCTTACCCACAGGTCCGCAGGTGGCTGGCCCCCTTCATCCTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206610.2 |
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| CDS CCA 72 bp | AATGGGCTGGCACTTGATCAGGGCACTGACCCAAGATaGCTGGTCCACAGGAATCCAGAGGAGGAAGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: NGLALDQGTDPR*LVHRNPEEEVK Trigger: CTTTACTTCCTCCTCTGGATTCCTGTGGACCAGCCATCTTGGGTCAGTGCCCTGATCAAGTGCCAGCCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 ENSMUST00000206610.2 |
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| CDS TCA 72 bp | AGGCTGCCGTGCCATAAAAGAAAGCTTCAGGCCAGATaGGGCAGGCATCTCCCACAGCAGAACATACAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RLPCHKRKLQAR*GRHLPQQNIQE Trigger: CTCTTGTATGTTCTGCTGTGGGAGATGCCTGCCTCATCTGGCCTGAAGCTTTCTTTTATGGCACGGCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055085.8 ENSMUST00000205360.2 |
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