Pregenerated sensors for TMEM86A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010307Ensembl transcript IDs: ENSMUST00000010451.8
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGATGTCTACCTCTGACTCAGGTGAGGGATGTGAGGCTGCCTCTTTaGGCTCTCCGGGTCATCCTGGACTACCAGCTTTCCTGGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: RCLPLTQVRDVRLPL*ALRVILDYQLSWEP Trigger: GGGCTCCCAGGAAAGCTGGTAGTCCAGGATGACCCGGAGAGCTCAAAGAGGCAGCCTCACATCCCTCACCTGAGTCAGAGGTAGACATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR CCA 90 bp | AGGACTCCTCATTCGTGGGTCATCTTGGAAGAGAAAAGGTGGGAATaGAGGGGCCTGGCACTGCCATTGGTCCTGGGCGTAAGAGAGAGT | + |
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Preference number: 1 (lower is better) Translates to: RTPHSWVILEEKRWE*RGLALPLVLGVRES Trigger: ACTCTCTCTTACGCCCAGGACCAATGGCAGTGCCAGGCCCCTCCATTCCCACCTTTTCTCTTCCAAGATGACCCACGAATGAGGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR GCA 90 bp | CCTGAGCTGGCCTGTGAGAGAACAAGGACCAATCTGAAACCTTGGTaGCCTCAAGCTTCCAGACCAACCCAGTCCTTCTACCATGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: PELACERTRTNLKPW*PQASRPTQSFYHGE Trigger: CTCTCCATGGTAGAAGGACTGGGTTGGTCTGGAAGCTTGAGGGCACCAAGGTTTCAGATTGGTCCTTGTTCTCTCACAGGCCAGCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR CCA 90 bp | AGGCCTGAGCTGGCCTGTGAGAGAACAAGGACCAATCTGAAACCTTaGTGCCCTCAAGCTTCCAGACCAACCCAGTCCTTCTACCATGGA | + |
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Preference number: 1 (lower is better) Translates to: RPELACERTRTNLKP*CPQASRPTQSFYHG Trigger: TCCATGGTAGAAGGACTGGGTTGGTCTGGAAGCTTGAGGGCACCAAGGTTTCAGATTGGTCCTTGTTCTCTCACAGGCCAGCTCAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR TCA 90 bp | TGGGCAGTAGAGGATGGAGTTACCCCATCCTCGCTCCCCTTGCATTaGCTGTGCTTTGGGTCTAAGACCCTAAAGTGTCATTTAGAACTC | + |
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Preference number: 1 (lower is better) Translates to: WAVEDGVTPSSLPLH*LCFGSKTLKCHLEL Trigger: GAGTTCTAAATGACACTTTAGGGTCTTAGACCCAAAGCACAGTCAATGCAAGGGGAGCGAGGATGGGGTAACTCCATCCTCTACTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGTTACCCCATCCTCGCTCCCCTTGCATTGACTGTGCTTTGGGTCTAAGATGCTGGTCCAGCTCCTaGATGACCCCAAAGTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: MELPHPRSPCIDCALGLRCWSSS*MTPKSG Trigger: CCCAGACTTTGGGGTCATGCAGGAGCTGGACCAGCA...TCTTAGACCCAAAGCACAGTCAATGCAAGGGGAGCGAGGATGGGGTAACTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTCAGGACTCCTCATTCGTGGGTCATCTTGGAAGAGAAAAGGTGGGAATGGTTCCCAGAAGCCGCCTaGTGGTCCAGCTCCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: AFRTPHSWVILEEKRWEWFPEAA*WSSSCM Trigger: CATGCAGGAGCTGGACCAGCAGGCGGCTTCTGGGAA...CCATTCCCACCTTTTCTCTTCCAAGATGACCCACGAATGAGGAGTCCTGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTTACCCCATCCTCGCTCCCCTTGCATTGACTGTGCTTTGGGTCTAAGACCCAATCTGAAACCTTGGTaGCCTCAAGCTTCCAGACCA | + |
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Preference number: 2 (lower is better) Translates to: ELPHPRSPCIDCALGLRPNLKPW*PQASRP Trigger: TGGTCTGGAAGCTTGAGGGCACCAAGGTTTCAGATT...GGGTCTTAGACCCAAAGCACAGTCAATGCAAGGGGAGCGAGGATGGGGTAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR CAA 90 bp | ATCTTGGAAGAGAAAAGGTGGGAATGGAGGGGCCTGGCACTGCCATaGGTCCTGGGCGTAAGAGAGAGTCACACTCTTGCATCTAATAAA | + |
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Preference number: 2 (lower is better) Translates to: ILEEKRWEWRGLALP*VLGVRESHTLASNK Trigger: TTTATTAGATGCAAGAGTGTGACTCTCTCTTACGCCCAGGACCAATGGCAGTGCCAGGCCCCTCCATTCCCACCTTTTCTCTTCCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR TCA 72 bp | CCTCTGACTCAGGTGAGGGATGTGAGGCTGCCTCTTTaGGCTCTCCGGGTCATCCTGGACTACCAGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: PLTQVRDVRLPL*ALRVILDYQLS Trigger: GGAAAGCTGGTAGTCCAGGATGACCCGGAGAGCTCAAAGAGGCAGCCTCACATCCCTCACCTGAGTCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR TCA 72 bp | GGCCTGAGCTGGCCTGTGAGAGAACAAGGACCAATCTaGAACCTTGGTGCCCTCAAGCTTCCAGACCAACCC | + |
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Preference number: 3 (lower is better) Translates to: GLSWPVREQGPI*NLGALKLPDQP Trigger: GGGTTGGTCTGGAAGCTTGAGGGCACCAAGGTTTCAGATTGGTCCTTGTTCTCTCACAGGCCAGCTCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR CCA 72 bp | GAGCCTGGGGAAGGAGCTTTCAGGACTCCTCATTCGTaGGTCATCTTGGAAGAGAAAAGGTGGGAATGGAGG | + |
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Preference number: 3 (lower is better) Translates to: EPGEGAFRTPHS*VILEEKRWEWR Trigger: CCTCCATTCCCACCTTTTCTCTTCCAAGATGACCCACGAATGAGGAGTCCTGAAAGCTCCTTCCCCAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR CCA 72 bp | CTGGCCTGTGAGAGAACAAGGACCAATCTGAAACCTTaGTGCCCTCAAGCTTCCAGACCAACCCAGTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LACERTRTNLKP*CPQASRPTQSF Trigger: GAAGGACTGGGTTGGTCTGGAAGCTTGAGGGCACCAAGGTTTCAGATTGGTCCTTGTTCTCTCACAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR-3UTR CAA 90 bp | AGTAACGAGGTTGGACACAGAAAACCAGGCTCCACCTTCAACCAGTCTTCCCAATGTGAGGCTGCCTCTTaGAGCTCTCCGGGTCATCCT | + |
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Preference number: 3 (lower is better) Translates to: SNEVGHRKPGSTFNQSSQCEAAS*SSPGHP Trigger: AGGATGACCCGGAGAGCTCAAAGAGGCAGCCTCACA...TTGGGAAGACTGGTTGAAGGTGGAGCCTGGTTTTCTGTGTCCAACCTCGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR CCA 72 bp | GACCCTAAAGTGTCATTTAGAACTCACTCCCAGAGCTaGAAGAAAGCATTGTTGGTGTGCTGGGGTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: DPKVSFRTHSQS*KKALLVCWGWG Trigger: CCCCCAACCCCAGCACACCAACAATGCTTTCTTCCAGCTCTGGGAGTGAGTTCTAAATGACACTTTAGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGTTACCCCATCCTCGCTCCCCTTGCATTGACTGTGCTTTGGGTCTAAGACATTCGTGGGTCATCTaGGAAGAGAAAAGGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: MELPHPRSPCIDCALGLRHSWVI*EEKRWE Trigger: TTCCCACCTTTTCTCTTCCAAGATGACCCACGAATG...TCTTAGACCCAAAGCACAGTCAATGCAAGGGGAGCGAGGATGGGGTAACTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR TCA 72 bp | CCATGGAGAGACAGCCATTGCCACTTAAAAGACTGCTaGAGTAACGAGGTTGGACACAGAAAACCAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: PWRDSHCHLKDC*SNEVGHRKPGS Trigger: GGAGCCTGGTTTTCTGTGTCCAACCTCGTTACTTCAGCAGTCTTTTAAGTGGCAATGGCTGTCTCTCCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR TCA 90 bp | CTGGGGACAGAGACTGGGGGTGATGGTATGAGGCCTGAGCTGGCCTGTGAGAGAAGGGAGGCACTGGGGTaGGCCAGCAGAAACCGAACA | + |
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Preference number: 4 (lower is better) Translates to: LGTETGGDGMRPELACERREALG*ASRNRT Trigger: TGTTCGGTTTCTGCTGGCTCACCCCAGTGCCTCCCT...TCTCTCACAGGCCAGCTCAGGCCTCATACCATCACCCCCAGTCTCTGTCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR TCA 90 bp | CTGGGGACAGAGACTGGGGGTGATGGTATGAGGCCTGAGCTGGCCTGTGAGAGAGGCATAGCACAGGCCTaGCAGCACTCCGATCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LGTETGGDGMRPELACERGIAQA*QHSDHQ Trigger: CTGGTGATCGGAGTGCTGTCAGGCCTGTGCTATGCC...TCTCTCACAGGCCAGCTCAGGCCTCATACCATCACCCCCAGTCTCTGTCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCCACCTTCAACCAGTCTTCCCAACTAGGGAGCCTGGGGAAGGAGCTTTCTGTCCGCAGAGCCAGTaGCCGCATGCCAAAGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: RLHLQPVFPTREPGEGAFCPQSQ*PHAKGR Trigger: GCGGCCTTTGGCATGCGGCCACTGGCTCTGCGGACA...GAAAGCTCCTTCCCCAGGCTCCCTAGTTGGGAAGACTGGTTGAAGGTGGAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR CCA 90 bp | TGGAAGAGAAAAGGTGGGAATGGAGGGGCCTGGCACTGCCATTGGTCCTGGGCGGTAGTCTTCTCCCACTaGCTCTCGGCTCTCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: WKRKGGNGGAWHCHWSWAVVFSH*LSALDS Trigger: GCTGTCGAGAGCCGAGAGCCAGTGGGAGAAGACTAC...CGCCCAGGACCAATGGCAGTGCCAGGCCCCTCCATTCCCACCTTTTCTCTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR TCA 90 bp | GGACACAGAAAACCAGGCTCCACCTTCAACCAGTCTTCCCAACTAGGGAGCCTGCCCCCACCAGGTAGGTaGAAGCACCTGACAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHRKPGSTFNQSSQLGSLPPPGR*KHLTGQ Trigger: CTGGCCTGTCAGGTGCTTTCACCTACCTGGTGGGGG...CAGGCTCCCTAGTTGGGAAGACTGGTTGAAGGTGGAGCCTGGTTTTCTGTGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR TCA 90 bp | CTGGGGACAGAGACTGGGGGTGATGGTATGAGGCCTGAGCTGGCCTGTGAGAGAGGAAGCAGAACTTGTTaGGAGCGATGGTCAGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGTETGGDGMRPELACERGSRTC*ERWSGP Trigger: CGGACCTGACCATCGCTCTCAACAAGTTCTGCTTCC...TCTCTCACAGGCCAGCTCAGGCCTCATACCATCACCCCCAGTCTCTGTCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR CAA 72 bp | GGACAAAGACATATAGTTGGAGACTGGCCCCTTCCTTaGGCATGGTCCACCCTAGCCCTGGGGACAGAGACT | + |
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Preference number: 4 (lower is better) Translates to: GQRHIVGDWPLP*AWSTLALGTET Trigger: AGTCTCTGTCCCCAGGGCTAGGGTGGACCATGCCAAAGGAAGGGGCCAGTCTCCAACTATATGTCTTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR TCA 90 bp | GCTTTCAGGACTCCTCATTCGTGGGTCATCTTGGAAGAGAAAAGGTGGGAATGGCGTGGTCCTGCCAGATaGGGAAGGCATCACCCACAG | + |
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Preference number: 4 (lower is better) Translates to: AFRTPHSWVILEEKRWEWRGPAR*GRHHPQ Trigger: CTGTGGGTGATGCCTTCCTCATCTGGCAGGACCACG...CCATTCCCACCTTTTCTCTTCCAAGATGACCCACGAATGAGGAGTCCTGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR GCA 90 bp | CCAGTCTTCCCAACTAGGGAGCCTGGGGAAGGAGCTTTCAGGACTCCTCATTCGAAGTATCCGTGGTCCTaGCAGATGAGGAAGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: PVFPTREPGEGAFRTPHSKYPWS*QMRKAS Trigger: TGATGCCTTCCTCATCTGGCAGGACCACGGATACTT...CGAATGAGGAGTCCTGAAAGCTCCTTCCCCAGGCTCCCTAGTTGGGAAGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR GCA 90 bp | CTGCCATTGGTCCTGGGCGTAAGAGAGAGTCACACTCTTGCATCTAATAAAAAGGAGCCAGTGGCCGCATaGCAAAGGCCGCGGCGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LPLVLGVRESHTLASNKKEPVAA*QRPRRR Trigger: TCTACGCCGCGGCCTTTGGCATGCGGCCACTGGCTC...CTTTTTATTAGATGCAAGAGTGTGACTCTCTCTTACGCCCAGGACCAATGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR GCA 90 bp | GCTGGGTTAAGCACCCCTCAGGAGCTCTCTGAGGCCTGCAACTTTAAGTCTTTTAACCAACCGCAGCCCTaGCATAGCTCTCCAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: AGLSTPQELSEACNFKSFNQPQP*HSSPAH Trigger: ATGGGCTGGAGAGCTATGGCAGGGCTGCGGTTGGTT...AAAAGACTTAAAGTTGCAGGCCTCAGAGAGCTCCTGAGGGGTGCTTAACCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR CCA 90 bp | GAGTTACCCCATCCTCGCTCCCCTTGCATTGACTGTGCTTTGGGTCTAAGACCCAGAAGGGCACCAGTTTaGGTCCTTCGCTCTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: ELPHPRSPCIDCALGLRPRRAPV*VLRSSP Trigger: TGGTGAAGAGCGAAGGACCCAAACTGGTGCCCTTCT...GGGTCTTAGACCCAAAGCACAGTCAATGCAAGGGGAGCGAGGATGGGGTAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR CAA 72 bp | GAAGGAGCTTTCAGGACTCCTCATTCGTGGGTCATCTaGGAAGAGAAAAGGTGGGAATGGAGGGGCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: EGAFRTPHSWVI*EEKRWEWRGLA Trigger: TGCCAGGCCCCTCCATTCCCACCTTTTCTCTTCCAAGATGACCCACGAATGAGGAGTCCTGAAAGCTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR TCA 90 bp | GAGTTACCCCATCCTCGCTCCCCTTGCATTGACTGTGCTTTGGGTCTAAGACCCAGAAACCGAACACCATaGGCCAGAAGAAAAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ELPHPRSPCIDCALGLRPRNRTP*ARRKSQ Trigger: CTGGCTTTTTCTTCTGGCTCATGGTGTTCGGTTTCT...GGGTCTTAGACCCAAAGCACAGTCAATGCAAGGGGAGCGAGGATGGGGTAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR CCA 90 bp | GGACACAGAAAACCAGGCTCCACCTTCAACCAGTCTTCCCAACTAGGGAGCCTGTGTTCAAAGTATCCGTaGTCCTGCCAGATGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GHRKPGSTFNQSSQLGSLCSKYP*SCQMRK Trigger: CTTCCTCATCTGGCAGGACCACGGATACTTTGAACA...CAGGCTCCCTAGTTGGGAAGACTGGTTGAAGGTGGAGCCTGGTTTTCTGTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| 3UTR CAA 72 bp | CTCAGGAGCTCTCTGAGGCCTGCAACTTTAAGTCTTTaGCAGACAGTAGGACAAAGACATATAGTTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: LRSSLRPATLSL*QTVGQRHIVGD Trigger: GTCTCCAACTATATGTCTTTGTCCTACTGTCTGCAAAAGACTTAAAGTTGCAGGCCTCAGAGAGCTCCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS GCA 90 bp | CGCCAGCTCTGTCCACCGCCAGGCTGCCCCAACCAACCGCAGCCCTaGCATAGCTCTCCAGCCCATGAAGCTGATGAGGGCCACATAGAC | + |
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Preference number: 5 (lower is better) Translates to: RQLCPPPGCPNQPQP*HSSPAHEADEGHID Trigger: GTCTATGTGGCCCTCATCAGCTTCATGGGCTGGAGAGCTATGGCAGGGCTGCGGTTGGTTGGGGCAGCCTGGCGGTGGACAGAGCTGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS GCA 90 bp | ACAGCACTCCGATCACCAGGCCTGTCCGCAGAGCCAGTGGCCGCATaGCAAAGGCCGCGGCGTAGAGGATGTGTGCCACGGCAAACATCA | + |
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Preference number: 5 (lower is better) Translates to: TALRSPGLSAEPVAA*QRPRRRGCVPRQTS Trigger: TGATGTTTGCCGTGGCACACATCCTCTACGCCGCGGCCTTTGGCATGCGGCCACTGGCTCTGCGGACAGGCCTGGTGATCGGAGTGCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS GCA 90 bp | CAGAGCCAGTGGCCGCATGCCAAAGGCCGCGGCGTAGAGGATGTGTaGCACGGCAAACATCAGGAGACCATGTTCAAAGTATCCGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: QSQWPHAKGRGVEDV*HGKHQETMFKVSVV Trigger: GACCACGGATACTTTGAACATGGTCTCCTGATGTTTGCCGTGGCACACATCCTCTACGCCGCGGCCTTTGGCATGCGGCCACTGGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR CAA 90 bp | TGGAAGAGAAAAGGTGGGAATGGAGGGGCCTGGCACTGCCATTGGTCCTGGGCGACGGGGAAGCAGAACTaGTTGAGAGCGATGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: WKRKGGNGGAWHCHWSWATGKQN*LRAMVR Trigger: CCTGACCATCGCTCTCAACAAGTTCTGCTTCCCCGT...CGCCCAGGACCAATGGCAGTGCCAGGCCCCTCCATTCCCACCTTTTCTCTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS TCA 90 bp | GCTCAGTCTGTAGTCTTCTCCCACTGGCTCTCGGCTCTCGACAGCTaGCAGGGCAATGAGCATCTGAGCAGCATAGTAGGTAGACATGAT | + |
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Preference number: 5 (lower is better) Translates to: AQSVVFSHWLSALDS*QGNEHLSSIVGRHD Trigger: ATCATGTCTACCTACTATGCTGCTCAGATGCTCATTGCCCTGTCAGCTGTCGAGAGCCGAGAGCCAGTGGGAGAAGACTACAGACTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS GCA 90 bp | GCCACGGCAAACATCAGGAGACCATGTTCAAAGTATCCGTGGTCCTaGCAGATGAGGAAGGCATCACCCACAGCAGAAAAGACAAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: ATANIRRPCSKYPWS*QMRKASPTAEKTSP Trigger: GGGACTTGTCTTTTCTGCTGTGGGTGATGCCTTCCTCATCTGGCAGGACCACGGATACTTTGAACATGGTCTCCTGATGTTTGCCGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS-3UTR CAA 90 bp | GCTGGGTTAAGCACCCCTCAGGAGCTCTCTGAGGCCTGCAACTTTAAGTCTTTTGGGAAGCAGAACTTGTaGAGAGCGATGGTCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: AGLSTPQELSEACNFKSFGKQNL*RAMVRS Trigger: GGACCTGACCATCGCTCTCAACAAGTTCTGCTTCCC...AAAAGACTTAAAGTTGCAGGCCTCAGAGAGCTCCTGAGGGGTGCTTAACCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS CCA 90 bp | ATGTGTGCCACGGCAAACATCAGGAGACCATGTTCAAAGTATCCGTaGTCCTGCCAGATGAGGAAGGCATCACCCACAGCAGAAAAGACA | + |
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Preference number: 5 (lower is better) Translates to: MCATANIRRPCSKYP*SCQMRKASPTAEKT Trigger: TGTCTTTTCTGCTGTGGGTGATGCCTTCCTCATCTGGCAGGACCACGGATACTTTGAACATGGTCTCCTGATGTTTGCCGTGGCACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS TCA 90 bp | CAAACATCAGGAGACCATGTTCAAAGTATCCGTGGTCCTGCCAGATaGGGAAGGCATCACCCACAGCAGAAAAGACAAGTCCCACGAAGA | + |
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Preference number: 5 (lower is better) Translates to: QTSGDHVQSIRGPAR*GRHHPQQKRQVPRR Trigger: TCTTCGTGGGACTTGTCTTTTCTGCTGTGGGTGATGCCTTCCTCATCTGGCAGGACCACGGATACTTTGAACATGGTCTCCTGATGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS GCA 72 bp | CGATCACCAGGCCTGTCCGCAGAGCCAGTGGCCGCATaGCAAAGGCCGCGGCGTAGAGGATGTGTGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: RSPGLSAEPVAA*QRPRRRGCVPR Trigger: CCGTGGCACACATCCTCTACGCCGCGGCCTTTGGCATGCGGCCACTGGCTCTGCGGACAGGCCTGGTGATCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS CCA 72 bp | CAGCACTCCGATCACCAGGCCTGTCCGCAGAGCCAGTaGCCGCATGCCAAAGGCCGCGGCGTAGAGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: QHSDHQACPQSQ*PHAKGRGVEDV Trigger: CACATCCTCTACGCCGCGGCCTTTGGCATGCGGCCACTGGCTCTGCGGACAGGCCTGGTGATCGGAGTGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS GCA 72 bp | TGTCCACCGCCAGGCTGCCCCAACCAACCGCAGCCCTaGCATAGCTCTCCAGCCCATGAAGCTGATGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: CPPPGCPNQPQP*HSSPAHEADEG Trigger: GCCCTCATCAGCTTCATGGGCTGGAGAGCTATGGCAGGGCTGCGGTTGGTTGGGGCAGCCTGGCGGTGGACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS TCA 72 bp | GGCCACATAGACCCCCACCAGGTAGGTGAAAGCACCTaGCAGGCCAGGGTAGAGCAGGGCATAGCACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GHIDPHQVGEST*QARVEQGIAQA Trigger: GGCCTGTGCTATGCCCTGCTCTACCCTGGCCTGTCAGGTGCTTTCACCTACCTGGTGGGGGTCTATGTGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS GCA 72 bp | TGGCCGCATGCCAAAGGCCGCGGCGTAGAGGATGTGTaGCACGGCAAACATCAGGAGACCATGTTCAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: WPHAKGRGVEDV*HGKHQETMFKV Trigger: TACTTTGAACATGGTCTCCTGATGTTTGCCGTGGCACACATCCTCTACGCCGCGGCCTTTGGCATGCGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS TCA 72 bp | GTAGTCTTCTCCCACTGGCTCTCGGCTCTCGACAGCTaGCAGGGCAATGAGCATCTGAGCAGCATAGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: VVFSHWLSALDS*QGNEHLSSIVG Trigger: ACCTACTATGCTGCTCAGATGCTCATTGCCCTGTCAGCTGTCGAGAGCCGAGAGCCAGTGGGAGAAGACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS CCA 72 bp | ACGGCAAACATCAGGAGACCATGTTCAAAGTATCCGTaGTCCTGCCAGATGAGGAAGGCATCACCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: TANIRRPCSKYP*SCQMRKASPTA Trigger: TGCTGTGGGTGATGCCTTCCTCATCTGGCAGGACCACGGATACTTTGAACATGGTCTCCTGATGTTTGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS TCA 72 bp | GGAGACCATGTTCAAAGTATCCGTGGTCCTGCCAGATaGGGAAGGCATCACCCACAGCAGAAAAGACAAGTC | + |
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Preference number: 6 (lower is better) Translates to: GDHVQSIRGPAR*GRHHPQQKRQV Trigger: GACTTGTCTTTTCTGCTGTGGGTGATGCCTTCCTCATCTGGCAGGACCACGGATACTTTGAACATGGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS CAA 72 bp | AAATACACACAGGTAGCCTTAAAGAAGGGCACCAGTTaGGGTCCTTCGCTCTTCACCACAGTGACCGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: KYTQVALKKGTS*GPSLFTTVTGD Trigger: GTCTCCGGTCACTGTGGTGAAGAGCGAAGGACCCAAACTGGTGCCCTTCTTTAAGGCTACCTGTGTGTATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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| CDS GCA 72 bp | AACATCAGGAGACCATGTTCAAAGTATCCGTGGTCCTaGCAGATGAGGAAGGCATCACCCACAGCAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: NIRRPCSKYPWS*QMRKASPTAEK Trigger: CTTTTCTGCTGTGGGTGATGCCTTCCTCATCTGGCAGGACCACGGATACTTTGAACATGGTCTCCTGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010451.8 |
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