Pregenerated sensors for TMEM82 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043085Ensembl transcript IDs: ENSMUST00000053263.9, ENSMUST00000143154.8
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGGCCAGAGGGCAGGGGCCATTCTGAGGTCACAATTGTCCTCTTaGCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: GGQRAGAILRSQLSS*PAKKSGSADAVHLQ Trigger: TTGGAGATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCCTCTGGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| 3UTR TCA 90 bp | TGGGGCAGGTGTGGAAGGCCGGGGCTCACATGGATCTGTCCATCCTaGTTCTCCTTCTGCTGTTACTGCTGCTGTTACTGTAGGCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: WGRCGRPGLTWICPS*FSFCCYCCCYCRPL Trigger: CAGAGGCCTACAGTAACAGCAGCAGTAACAGCAGAAGGAGAATCAGGATGGACAGATCCATGTGAGCCCCGGCCTTCCACACCTGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR CCA 90 bp | ACCGCATGTTCCTGGTGCAGTTCTTTGTCCTGGGACACAAGAACCTaGTACTTCAGCCTGTGTCCTTTGTCCCCCAGGGAACTCAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: TACSWCSSLSWDTRT*YFSLCPLSPRELRA Trigger: TGCCCTGAGTTCCCTGGGGGACAAAGGACACAGGCTGAAGTACCAGGTTCTTGTGTCCCAGGACAAAGAACTGCACCAGGAACATGCGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR CCA 90 bp | CCAACCATCTTGATAACCGCATGTTCCTGGTGCAGTTCTTTGTCCTaGGACACAAGAACCTGGTACTTCAGCCTGTGTCCTTTGTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: PTILITACSWCSSLS*DTRTWYFSLCPLSP Trigger: GGGGGACAAAGGACACAGGCTGAAGTACCAGGTTCTTGTGTCCCAGGACAAAGAACTGCACCAGGAACATGCGGTTATCAAGATGGTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTCTAGGTCCCCAGCCGGGCAGGGGCCATTCTaGGGTCACAATTGTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: REGFTLRPSCPHLSRSPAGQGPF*GHNCPL Trigger: AAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCC...GGCTGGGGACCTAGAGAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| 3UTR-3UTR CCA 90 bp | CAACTTCTCCAGCTCCCAACCATCTTGATAACCGCATGTTCCTGGTGCAGTTCTTCGGCGAGAGCAAGGTaGGGGAGGGGTGGCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QLLQLPTILITACSWCSSSARAR*GRGGQR Trigger: CCTCTGGCCACCCCTCCCCCACCTTGCTCTCGCCGA...AGAACTGCACCAGGAACATGCGGTTATCAAGATGGTTGGGAGCTGGAGAAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGAATCGGCCAGCAATCTACGAGGACGAGGAGACCCATGTGTAGGGGTGACATGTAGGCCTCTGGGGTaGAAAGCCCTGTATCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: AESASNLRGRGDPCVGVTCRPLG*KALYLA Trigger: TGCCAGATACAGGGCTTTCCACCCCAGAGGCCTACA...TGTCACCCCTACACATGGGTCTCCTCGTCCTCGTAGATTGCTGGCCGATTCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR-3UTR CCA 90 bp | TACAAGTGCCCAAGGAGGCCAGAGACATCACATCTCTTAAGCATCTCCTACAGAAGGGGACCGCGCTCCTaGCTGGGGCAGGTGTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YKCPRRPETSHLLSISYRRGPRS*LGQVWK Trigger: CTTCCACACCTGCCCCAGCCAGGAGCGCGGTCCCCT...TCTGTAGGAGATGCTTAAGAGATGTGATGTCTCTGGCCTCCTTGGGCACTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGGCCCAAAAGTCTAGGTaGGGACCAGCCACTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: KSGSADAVHLQERGIHSEAQKSR*GPATQS Trigger: AGACTGAGTGGCTGGTCCTCACCTAGACTTTTGGGC...CTCAGAGTGAATCCCTCTCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGATTCTGCTGTTACTGCTaGTGTTACTGTAGGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PLAQPRKVGLLTLSISKRFCCYC*CYCRPL Trigger: CAGAGGCCTACAGTAACAGCAGCAGTAACAGCAGAA...TCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGGTCAGGCCACATCGTGTaGTCAAGACCTTGCTGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: KVGLLTLSISKREGFTLRSGHIV*SRPCWL Trigger: TAACCAGCAAGGTCTTGACCACACGATGTGGCCTGA...CCTCAGAGTGAATCCCTCTCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGATGTCCCTGCCTTCAGTTCCCCAAAACTGTATAAGCCTGCAGTCACCCTCAGGCCACATCGTGTaGTCAAGACCTTGCTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: SWMSLPSVPQNCISLQSPSGHIV*SRPCWL Trigger: TAACCAGCAAGGTCTTGACCACACGATGTGGCCTGA...GGGTGACTGCAGGCTTATACAGTTTTGGGGAACTGAAGGCAGGGACATCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR CAA 90 bp | CAGCTCCCAACCATCTTGATAACCGCATGTTCCTGGTGCAGTTCTTaGTCCTGGGACACAAGAACCTGGTACTTCAGCCTGTGTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QLPTILITACSWCSS*SWDTRTWYFSLCPL Trigger: CAAAGGACACAGGCTGAAGTACCAGGTTCTTGTGTCCCAGGACAAAGAACTGCACCAGGAACATGCGGTTATCAAGATGGTTGGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR CAA 90 bp | TTCCATGCTCGTAACCCTGAGCAACTTCTCCAGCTCCCAACCATCTaGATAACCGCATGTTCCTGGTGCAGTTCTTTGTCCTGGGACACA | + |
|
Preference number: 2 (lower is better) Translates to: FHARNPEQLLQLPTI*ITACSWCSSLSWDT Trigger: TGTGTCCCAGGACAAAGAACTGCACCAGGAACATGCGGTTATCAAGATGGTTGGGAGCTGGAGAAGTTGCTCAGGGTTACGAGCATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR-3UTR TCA 90 bp | ACCATCTTGATAACCGCATGTTCCTGGTGCAGTTCTTTGTCCTGGGACACAAGAGGGCAGGGGCCATTCTaGGGTCACAATTGTCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TILITACSWCSSLSWDTRGQGPF*GHNCPL Trigger: AAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCC...TCTTGTGTCCCAGGACAAAGAACTGCACCAGGAACATGCGGTTATCAAGATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR CCA 72 bp | CCGCAGGGCGAGTCAGGAGGGGACCGCGCTCCTGGCTaGGGCAGGTGTGGAAGGCCGGGGCTCACATGGATC | + |
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Preference number: 3 (lower is better) Translates to: PQGESGGDRAPG*GRCGRPGLTWI Trigger: GATCCATGTGAGCCCCGGCCTTCCACACCTGCCCCAGCCAGGAGCGCGGTCCCCTCCTGACTCGCCCTGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR-3UTR CAA 90 bp | GCCGAATCGGCCAGCAATCTACGAGGACGAGGAGACCCATGTGTAGGGGTGACACTGCCCCCGAAGACATaGGATTCAGGAAGCCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AESASNLRGRGDPCVGVTLPPKT*DSGSPF Trigger: AAAGGGGCTTCCTGAATCCAATGTCTTCGGGGGCAG...TGTCACCCCTACACATGGGTCTCCTCGTCCTCGTAGATTGCTGGCCGATTCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR TCA 72 bp | CCTCCTGACTTCGGGTCCCGGTGTGGTCTTTCACAGTaGGTACTCACAGGGCTTCTGAACCCCCTGTTCGAC | + |
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Preference number: 3 (lower is better) Translates to: PPDFGSRCGLSQ*VLTGLLNPLFD Trigger: GTCGAACAGGGGGTTCAGAAGCCCTGTGAGTACTCACTGTGAAAGACCACACCGGGACCCGAAGTCAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR GCA 72 bp | AGGGCAGGGGCCATTCTGAGGTCACAATTGTCCTCTTaGCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: RAGAILRSQLSS*PAKKSGSADAV Trigger: GACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| 3UTR CCA 72 bp | TCCTGGTGCAGTTCTTTGTCCTGGGACACAAGAACCTaGTACTTCAGCCTGTGTCCTTTGTCCCCCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SWCSSLSWDTRT*YFSLCPLSPRE Trigger: TTCCCTGGGGGACAAAGGACACAGGCTGAAGTACCAGGTTCTTGTGTCCCAGGACAAAGAACTGCACCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR TCA 72 bp | ATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTaGCGCTGTCCATCTCCAAGAGAGAGGGATTCACTC | + |
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Preference number: 3 (lower is better) Translates to: IVLLPSQEKWVC*RCPSPRERDSL Trigger: GAGTGAATCCCTCTCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| 3UTR TCA 72 bp | TGTGGAAGGCCGGGGCTCACATGGATCTGTCCATCCTaGTTCTCCTTCTGCTGTTACTGCTGCTGTTACTGT | + |
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Preference number: 3 (lower is better) Translates to: CGRPGLTWICPS*FSFCCYCCCYC Trigger: ACAGTAACAGCAGCAGTAACAGCAGAAGGAGAATCAGGATGGACAGATCCATGTGAGCCCCGGCCTTCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR GCA 72 bp | CAAGACTTGTTCAGCCATCGCCTGAGATTCCTGAAGTaGTTCCCCATGCTAATGAGGCATTCCAGGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: QDLFSHRLRFLK*FPMLMRHSRSS Trigger: AGAGGACCTGGAATGCCTCATTAGCATGGGGAAGCACTTCAGGAATCTCAGGCGATGGCTGAACAAGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR CCA 72 bp | TTGATAACCGCATGTTCCTGGTGCAGTTCTTTGTCCTaGGACACAAGAACCTGGTACTTCAGCCTGTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: LITACSWCSSLS*DTRTWYFSLCP Trigger: AGGACACAGGCTGAAGTACCAGGTTCTTGTGTCCCAGGACAAAGAACTGCACCAGGAACATGCGGTTATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| 3UTR TCA 72 bp | TTTTCTTCCTGTGCCACTGTGATCCTCAACGCAGGTTaGGAAAAGTCACCTTTATTGTCTTCGGCGAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: FSSCATVILNAG*EKSPLLSSARA Trigger: TGCTCTCGCCGAAGACAATAAAGGTGACTTTTCTCAACCTGCGTTGAGGATCACAGTGGCACAGGAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | CCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGACCGCGCTCCTGGCTaGGGCAGGTGTGGAAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PLAQPRKVGLLTLSISKRDRAPG*GRCGRP Trigger: CGGCCTTCCACACCTGCCCCAGCCAGGAGCGCGGTC...TCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
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| CDS-3UTR CCA 90 bp | GCCGAATCGGCCAGCAATCTACGAGGACGAGGAGACCCATGTGTAGGGGTGACACCAGAGACAGCAGAGTaGACACAGCCCGGAGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: AESASNLRGRGDPCVGVTPETAE*TQPGAR Trigger: TCTCGCTCCGGGCTGTGTCCACTCTGCTGTCTCTGG...TGTCACCCCTACACATGGGTCTCCTCGTCCTCGTAGATTGCTGGCCGATTCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | TGGCCAGAGGGCAGGGGCCATTCTGAGGTCACAATTGTCCTCTTGCCCAGCCAAGTTCAGGGAGCGGTGTaGGGCACCTTCCTGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: WPEGRGHSEVTIVLLPSQVQGAV*GTFLEE Trigger: TTCCTCCAGGAAGGTGCCCCACACCGCTCCCTGAAC...TTGGCTGGGCAAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCCTCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | AAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGGTGCGGCTCAGGAGCCTaGGCATGCCGTGCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KVGLLTLSISKREGFTLRCGSGA*ACRAGW Trigger: CCAGCCAGCACGGCATGCCCAGGCTCCTGAGCCGCA...CCTCAGAGTGAATCCCTCTCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | GGTCACAATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCCGCACCAGCACCGTCTaGACCTGGCCCTGTAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GHNCPLAQPRKVGLLTLSRTSTV*TWPCRL Trigger: CAGCCTACAGGGCCAGGTCCAGACGGTGCTGGTGCG...GGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
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| CDS-3UTR CCA 90 bp | CTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTGGCTGGGGCAGGTGTaGAAGGCCGGGGCTCACATG | + |
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Preference number: 4 (lower is better) Translates to: LSISKREGFTLRPSCPHLWLGQV*KAGAHM Trigger: CATGTGAGCCCCGGCCTTCCACACCTGCCCCAGCCA...GAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCTCTTGGAGATGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
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| CDS-3UTR CCA 90 bp | GGTCACAATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCCGCACCAGCACCGTCTaGACCTGGCCCTGTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GHNCPLAQPRKVGLLTLSRTSTV*TWPCRP Trigger: AGGCCTACAGGGCCAGGTCCAGACGGTGCTGGTGCG...GGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCAGGCCACTGTCAGAGTaGGGCTCAGGAGCCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSISKREGFTLRPSCPHLRPLSE*GSGAWA Trigger: TGCCCAGGCTCCTGAGCCGCACTCTGACAGTGGCCT...GAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCTCTTGGAGATGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | AAAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGAGGGGACCGCGCTCCTaGCTGGGGCAGGTGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KSGSADAVHLQERGIHSERGPRS*LGQVWK Trigger: CTTCCACACCTGCCCCAGCCAGGAGCGCGGTCCCCT...CTCAGAGTGAATCCCTCTCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
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| CDS-3UTR GCA 90 bp | TGGCCAGAGGGCAGGGGCCATTCTGAGGTCACAATTGTCCTCTTGCCCAGCCAACACAGTAGCGCTGGCTaGTGTGCAGTTCATAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: WPEGRGHSEVTIVLLPSQHSSAG*CAVHRG Trigger: GCCTCTATGAACTGCACAGCAGCCAGCGCTACTGTG...TTGGCTGGGCAAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCCTCTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR GCA 90 bp | AGGGCAGGGGCCATTCTGAGGTCACAATTGTCCTCTTGCCCAGCCAAGAAAAGTAGGCCACTGTCAGAGTaGGGCTCAGGAGCCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RAGAILRSQLSSCPAKKSRPLSE*GSGAWA Trigger: TGCCCAGGCTCCTGAGCCGCACTCTGACAGTGGCCT...ACTTTTCTTGGCTGGGCAAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR GCA 90 bp | AAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGGGGAAGAGGCCACCCATaGGCACCAGCACCGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KVGLLTLSISKREGFTLRGRGHP*APAPSG Trigger: TCCAGACGGTGCTGGTGCGCATGGGTGGCCTCTTCC...CCTCAGAGTGAATCCCTCTCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | GGTCACAATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCCCAGAGACAGCAGAGTaGACACAGCCCGGAGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: GHNCPLAQPRKVGLLTLSPETAE*TQPGAR Trigger: TCTCGCTCCGGGCTGTGTCCACTCTGCTGTCTCTGG...GGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| 3UTR CAA 72 bp | GGTGGCCAGAGGGCAGGGGCCATTCTGAGGTCACAATaGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GGQRAGAILRSQ*SSCPAKKSGSA Trigger: AGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCCTCTGGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR TCA 90 bp | CCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGACAGCCCAGGGAGAACTaGCACACCAGGAAAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PLAQPRKVGLLTLSISKRQPREN*HTRKSW Trigger: CCAGCTTTTCCTGGTGTGTCAGTTCTCCCTGGGCTG...TCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR GCA 90 bp | TCGACGTTGGCCGAATCGGCCAGCAATCTACGAGGACGAGGAGACCCATGTGTACACAGTAGCGCTGGCTaGTGTGCAGTTCATAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: STLAESASNLRGRGDPCVHSSAG*CAVHRG Trigger: GCCTCTATGAACTGCACAGCAGCCAGCGCTACTGTG...TACACATGGGTCTCCTCGTCCTCGTAGATTGCTGGCCGATTCGGCCAACGTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | GCCGAATCGGCCAGCAATCTACGAGGACGAGGAGACCCATGTGTAGGGGTGACAGGCTGTCGAAGAGACTaGAACCCCACTCAAAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: AESASNLRGRGDPCVGVTGCRRD*NPTQRK Trigger: CTTCCTTTGAGTGGGGTTCCAGTCTCTTCGACAGCC...TGTCACCCCTACACATGGGTCTCCTCGTCCTCGTAGATTGCTGGCCGATTCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | CACAATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCTGTGGGGCACCTTCCTaGAGGAAGCTCAGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: HNCPLAQPRKVGLLTLSICGAPS*RKLRPQ Trigger: CTGTGGCCTGAGCTTCCTCCAGGAAGGTGCCCCACA...GATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | AAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGGGTTCAGGGAGCGGTGTaGGGCACCTTCCTGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KVGLLTLSISKREGFTLRVQGAV*GTFLEE Trigger: TTCCTCCAGGAAGGTGCCCCACACCGCTCCCTGAAC...CCTCAGAGTGAATCCCTCTCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | ACAAGACTTGTTCAGCCATCGCCTGAGATTCCTGAAGTGCTTCCCCATGCTAATTGCGGCTCAGGAGCCTaGGCATGCCGTGCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TRLVQPSPEIPEVLPHANCGSGA*ACRAGW Trigger: CCAGCCAGCACGGCATGCCCAGGCTCCTGAGCCGCA...ATTAGCATGGGGAAGCACTTCAGGAATCTCAGGCGATGGCTGAACAAGTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
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| CDS-3UTR CCA 90 bp | CAGCCAATGACCTTTGCCCATCCTGGATGTCCCTGCCTTCAGTTCCCCAAAACTAGCACCGTCTGGACCTaGCCCTGTAGGCCTGCATGT | + |
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Preference number: 4 (lower is better) Translates to: QPMTFAHPGCPCLQFPKTSTVWT*PCRPAC Trigger: ACATGCAGGCCTACAGGGCCAGGTCCAGACGGTGCT...AGTTTTGGGGAACTGAAGGCAGGGACATCCAGGATGGGCAAAGGTCATTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
||
| CDS-3UTR TCA 90 bp | CACAATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCCAGCCCAGGGAGAACTaGCACACCAGGAAAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HNCPLAQPRKVGLLTLSIQPREN*HTRKSW Trigger: CCAGCTTTTCCTGGTGTGTCAGTTCTCCCTGGGCTG...GATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGCACCGTCTGGACCTaGCCCTGTAGGCTGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RKVGLLTLSISKREGFTLSTVWT*PCRLKR Trigger: TCGCTTCAGCCTACAGGGCCAGGTCCAGACGGTGCT...CAGAGTGAATCCCTCTCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTCTAGGTCCCCAGCCCCTCCTGCATGTAGATaGCCAACAGTGTGTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: REGFTLRPSCPHLSRSPAPPACR*PTVCNR Trigger: TCTGTTACACACTGTTGGTCATCTACATGCAGGAGG...GGCTGGGGACCTAGAGAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
||
| CDS-3UTR TCA 90 bp | TGGCCAGAGGGCAGGGGCCATTCTGAGGTCACAATTGTCCTCTTGCCCAGCCAAAGGCCTGCATGTAGATaGCCAACAGTGTGTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WPEGRGHSEVTIVLLPSQRPACR*PTVCNR Trigger: TCTGTTACACACTGTTGGTCATCTACATGCAGGCCT...TTGGCTGGGCAAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCCTCTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTCTAGGTCCCCAGCCTTCTGCTGTTACTGCTaGTGTTACTGTAGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: REGFTLRPSCPHLSRSPAFCCYC*CYCRPL Trigger: CAGAGGCCTACAGTAACAGCAGCAGTAACAGCAGAA...GGCTGGGGACCTAGAGAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
||
| CDS-3UTR CCA 90 bp | TCCATCTCCAAGAGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTCTTGTAGGCCTCTGGGGTaGAAAGCCCTGTATCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SISKREGFTLRPSCPHLSCRPLG*KALYLA Trigger: TGCCAGATACAGGGCTTTCCACCCCAGAGGCCTACA...AGAGAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCTCTTGGAGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
||
| CDS-3UTR TCA 90 bp | CAATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCTCCTTTCAGGAGACTGTTaGGAACCGAGACTCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLSSCPAKKSGSADAVHLLSGDC*EPRLQG Trigger: CCCTTGGAGTCTCGGTTCTCAACAGTCTCCTGAAAG...GAGATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCATCGCCTGAGATTCCTGAAGTGCTTCCCCATGCTAATGAGGCATTCCAGCTTTCAGGAGACTGTTaGGAACCGAGACTCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPEIPEVLPHANEAFQLSGDC*EPRLQG Trigger: CCCTTGGAGTCTCGGTTCTCAACAGTCTCCTGAAAG...CTGGAATGCCTCATTAGCATGGGGAAGCACTTCAGGAATCTCAGGCGATGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
||
| CDS-3UTR CCA 90 bp | TCCATCTCCAAGAGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTCTGGCTGTCGAAGAGACTaGAACCCCACTCAAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SISKREGFTLRPSCPHLSGCRRD*NPTQRK Trigger: CTTCCTTTGAGTGGGGTTCCAGTCTCTTCGACAGCC...AGAGAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCTCTTGGAGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| 3UTR CAA 72 bp | CGTAACCCTGAGCAACTTCTCCAGCTCCCAACCATCTaGATAACCGCATGTTCCTGGTGCAGTTCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNPEQLLQLPTI*ITACSWCSSLS Trigger: GGACAAAGAACTGCACCAGGAACATGCGGTTATCAAGATGGTTGGGAGCTGGAGAAGTTGCTCAGGGTTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
||
| 3UTR CAA 72 bp | ACCATCTTGATAACCGCATGTTCCTGGTGCAGTTCTTaGTCCTGGGACACAAGAACCTGGTACTTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TILITACSWCSS*SWDTRTWYFSL Trigger: CAGGCTGAAGTACCAGGTTCTTGTGTCCCAGGACAAAGAACTGCACCAGGAACATGCGGTTATCAAGATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
||
| 3UTR CAA 72 bp | GCAAAGTTTGTCATTGACTGCACAGCCTTCTGGGGCTaGATGCATAATGGGGGACTCCTGGTGTTAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKFVIDCTAFWG*MHNGGLLVLTE Trigger: CTCTGTTAACACCAGGAGTCCCCCATTATGCATCAAGCCCCAGAAGGCTGTGCAGTCAATGACAAACTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
||
| CDS CCA 90 bp | CCACTGTCAGAGTGCGGCTCAGGAGCCTGGGCATGCCGTGCTGGCTaGCCAGCAGGCCCAAGCAGACCCCACAGTAGCGCTGGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLSECGSGAWACRAG*PAGPSRPHSSAGCC Trigger: ACAGCAGCCAGCGCTACTGTGGGGTCTGCTTGGGCCTGCTGGCCAGCCAGCACGGCATGCCCAGGCTCCTGAGCCGCACTCTGACAGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 90 bp | GAGCCACTGCCGCCAGATCACTCACAGCAAAGGCCACTGTCAGAGTaGGGCTCAGGAGCCTGGGCATGCCGTGCTGGCTGGCCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPLPPDHSQQRPLSE*GSGAWACRAGWPAG Trigger: GCCTGCTGGCCAGCCAGCACGGCATGCCCAGGCTCCTGAGCCGCACTCTGACAGTGGCCTTTGCTGTGAGTGATCTGGCGGCAGTGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 90 bp | GCTGGCTGGCCAGCAGGCCCAAGCAGACCCCACAGTAGCGCTGGCTaGTGTGCAGTTCATAGAGGCTGCAGATGTGGCGGGTTAGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGWPAGPSRPHSSAG*CAVHRGCRCGGLGA Trigger: GGCGCCTAACCCGCCACATCTGCAGCCTCTATGAACTGCACAGCAGCCAGCGCTACTGTGGGGTCTGCTTGGGCCTGCTGGCCAGCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 90 bp | TCACAGCAAAGGCCACTGTCAGAGTGCGGCTCAGGAGCCTGGGCATaGCGTGCTGGCTGGCCAGCAGGCCCAAGCAGACCCCACAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQQRPLSECGSGAWA*RAGWPAGPSRPHSS Trigger: GCTACTGTGGGGTCTGCTTGGGCCTGCTGGCCAGCCAGCACGGCATGCCCAGGCTCCTGAGCCGCACTCTGACAGTGGCCTTTGCTGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCAGAGGGCAGGGGCCATTCTGAGGTCACAATTGTCCTCTTGCCCAGCCAAGCTCAGCCGCTGCTTTaGGGGCTGCCGCTGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WPEGRGHSEVTIVLLPSQAQPLL*GLPLGV Trigger: GACCCCCAGCGGCAGCCCCAAAAGCAGCGGCTGAGC...TTGGCTGGGCAAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCCTCTGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 90 bp | AGCAGACCCCACAGTAGCGCTGGCTGCTGTGCAGTTCATAGAGGCTaGAGATGTGGCGGGTTAGGCGCCGGGCACCCAGGGCAAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRPHSSAGCCAVHRG*RCGGLGAGHPGQGV Trigger: TACTCCTTGCCCTGGGTGCCCGGCGCCTAACCCGCCACATCTGCAGCCTCTATGAACTGCACAGCAGCCAGCGCTACTGTGGGGTCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGTGGCCAGAGGGCAGGGGCCATTCTGAGGTCACAATTGTCCTCTTGCAGCTGGAGCCTTTCCTaGTTCCCGGAACCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGGQRAGAILRSQLSSCSWSLS*FPEPLP Trigger: GGGCAAGGGTTCCGGGAACAAGGAAAGGCTCCAGCT...GCAAGAGGACAATTGTGACCTCAGAATGGCCCCTGCCCTCTGGCCACCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 90 bp | ACCCGGGACCCTATCAAGGTCAGGAACAGGGTCAGACCAGCCAGATaGAGCATCTCCAACGAGGCCCATTGCGCGCTCAGCCGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TRDPIKVRNRVRPAR*SISNEAHCALSRCF Trigger: AAAGCAGCGGCTGAGCGCGCAATGGGCCTCGTTGGAGATGCTGCATCTGGCTGGTCTGACCCTGTTCCTGACCTTGATAGGGTCCCGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS CCA 90 bp | GTCATCAACAGAAGGAAGAGGCCACCCATGCGCACCAGCACCGTCTaGACCTGGCCCTGTAGGCTGAAGCGATGTTGCCACTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VINRRKRPPMRTSTV*TWPCRLKRCCHCSS Trigger: GGAGGAGCAGTGGCAACATCGCTTCAGCCTACAGGGCCAGGTCCAGACGGTGCTGGTGCGCATGGGTGGCCTCTTCCTTCTGTTGATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
||
| CDS TCA 90 bp | CAGTGTGTAACAGATGGTGAGCGGGGTCCAGAATCGCACGGCCTCTaGGGAGCTCAGGAAGTCCTTGTTGATGAGAGCCACTGCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QCVTDGERGPESHGL*GAQEVLVDESHCRQ Trigger: CTGGCGGCAGTGGCTCTCATCAACAAGGACTTCCTGAGCTCCTCAGAGGCCGTGCGATTCTGGACCCCGCTCACCATCTGTTACACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 90 bp | GACACACCAGGAAAAGCTGGAGCCTTTCCTTGTTCCCGGAACCCTTaGCCAGAGACAGCAGAGTGGACACAGCCCGGAGCGAGAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DTPGKAGAFPCSRNP*PETAEWTQPGARTP Trigger: TGGAGTTCTCGCTCCGGGCTGTGTCCACTCTGCTGTCTCTGGGCAAGGGTTCCGGGAACAAGGAAAGGCTCCAGCTTTTCCTGGTGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | CAACTTCTCCAGCTCCCAACCATCTTGATAACCGCATGTTCCTGGTGCAGTTCTGCTCAGCCGCTGCTTTaGGGGCTGCCGCTGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLQLPTILITACSWCSSAQPLL*GLPLGV Trigger: GACCCCCAGCGGCAGCCCCAAAAGCAGCGGCTGAGC...AGAACTGCACCAGGAACATGCGGTTATCAAGATGGTTGGGAGCTGGAGAAGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTCTAGGTCCCCAGCCGAGCTCAGGAAGTCCTaGTTGATGAGAGCCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: REGFTLRPSCPHLSRSPAELRKS*LMRATA Trigger: GGCAGTGGCTCTCATCAACAAGGACTTCCTGAGCTC...GGCTGGGGACCTAGAGAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 90 bp | AGGAGACTGTTGAGAACCGAGACTCCAAGGGCCCCGATCAAGCCTTaGAGAAGGCTGTCGAAGAGACTGGAACCCCACTCAAAGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRLLRTETPRAPIKP*RRLSKRLEPHSKEG Trigger: CCCTTCCTTTGAGTGGGGTTCCAGTCTCTTCGACAGCCTTCTGCAAGGCTTGATCGGGGCCCTTGGAGTCTCGGTTCTCAACAGTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | CAATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCTCGGCCCCGATCAAGCCTaGCAGAAGGCTGTCGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLSSCPAKKSGSADAVHLGPDQA*QKAVEE Trigger: CTCTTCGACAGCCTTCTGCAAGGCTTGATCGGGGCC...GAGATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | GGTCACAATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCTGCCGCTGGGGGTCATaGACACAGGCCACGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GHNCPLAQPRKVGLLTLSCRWGS*TQATKK Trigger: TTTCTTCGTGGCCTGTGTCAATGACCCCCAGCGGCA...GGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | CACAATTGTCCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCAGCTGGAGCCTTTCCTaGTTCCCGGAACCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HNCPLAQPRKVGLLTLSISWSLS*FPEPLP Trigger: GGGCAAGGGTTCCGGGAACAAGGAAAGGCTCCAGCT...GATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACAATTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAGAGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTCTAGGTCCCTCAGGAAGTCCTTGTaGATGAGAGCCACTGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKREGFTLRPSCPHLSRSLRKSL*MRATAA Trigger: GGCGGCAGTGGCTCTCATCAACAAGGACTTCCTGAG...GGACCTAGAGAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCTCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTCTAGGTCCCCAGCCACTTTCAGGAGACTGTaGAGAACCGAGACTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: REGFTLRPSCPHLSRSPATFRRL*RTETPR Trigger: CCTTGGAGTCTCGGTTCTCAACAGTCTCCTGAAAGT...GGCTGGGGACCTAGAGAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGAGGGATTCACTCTGAGGCTCAGGAAGTCCTTGTaGATGAGAGCCACTGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KVGLLTLSISKREGFTLRLRKSL*MRATAA Trigger: GGCGGCAGTGGCTCTCATCAACAAGGACTTCCTGAG...CCTCAGAGTGAATCCCTCTCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGCCCAGCCAAGAAAAGTGGGTCTGCTGACGCTGTCCATCTCCAAGAGAGAGCTCAGGAAGTCCTaGTTGATGAGAGCCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLAQPRKVGLLTLSISKRELRKS*LMRATA Trigger: GGCAGTGGCTCTCATCAACAAGGACTTCCTGAGCTC...TCTCTTGGAGATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | CATGAATACAAGTGCCCAAGGAGGCCAGAGACATCACATCTCTTAAGCATCTCCGGCCCCGATCAAGCCTaGCAGAAGGCTGTCGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HEYKCPRRPETSHLLSISGPDQA*QKAVEE Trigger: CTCTTCGACAGCCTTCTGCAAGGCTTGATCGGGGCC...GGAGATGCTTAAGAGATGTGATGTCTCTGGCCTCCTTGGGCACTTGTATTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143154.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAGAGAGAGGGATTCACTCTGAGGCCTTCATGTCCCCACCTCTCTAGGTCCACTTTCAGGAGACTGTaGAGAACCGAGACTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKREGFTLRPSCPHLSRSTFRRL*RTETPR Trigger: CCTTGGAGTCTCGGTTCTCAACAGTCTCCTGAAAGT...GGACCTAGAGAGGTGGGGACATGAAGGCCTCAGAGTGAATCCCTCTCTCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS CCA 72 bp | GAGTGCGGCTCAGGAGCCTGGGCATGCCGTGCTGGCTaGCCAGCAGGCCCAAGCAGACCCCACAGTAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ECGSGAWACRAG*PAGPSRPHSSA Trigger: AGCGCTACTGTGGGGTCTGCTTGGGCCTGCTGGCCAGCCAGCACGGCATGCCCAGGCTCCTGAGCCGCACTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 72 bp | ACTGTCAGAGTGCGGCTCAGGAGCCTGGGCATGCCGTaGTGGCTGGCCAGCAGGCCCAAGCAGACCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: TVRVRLRSLGMP*WLASRPKQTPQ Trigger: CTGTGGGGTCTGCTTGGGCCTGCTGGCCAGCCAGCACGGCATGCCCAGGCTCCTGAGCCGCACTCTGACAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS CCA 72 bp | CAGCAAAGGCCACTGTCAGAGTGCGGCTCAGGAGCCTaGGCATGCCGTGCTGGCTGGCCAGCAGGCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QQRPLSECGSGA*ACRAGWPAGPS Trigger: GCTTGGGCCTGCTGGCCAGCCAGCACGGCATGCCCAGGCTCCTGAGCCGCACTCTGACAGTGGCCTTTGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 72 bp | AGACCAGCCAGATGCAGCATCTCCAACGAGGCCCATTaGGCGCTCAGCCGCTGCTTTTGGGGCTGCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RPARCSISNEAH*ALSRCFWGCRW Trigger: CCAGCGGCAGCCCCAAAAGCAGCGGCTGAGCGCGCAATGGGCCTCGTTGGAGATGCTGCATCTGGCTGGTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS GCA 72 bp | CACAGTAGCGCTGGCTGCTGTGCAGTTCATAGAGGCTaGAGATGTGGCGGGTTAGGCGCCGGGCACCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HSSAGCCAVHRG*RCGGLGAGHPG Trigger: CCCTGGGTGCCCGGCGCCTAACCCGCCACATCTGCAGCCTCTATGAACTGCACAGCAGCCAGCGCTACTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS CCA 72 bp | AAGAGGCCACCCATGCGCACCAGCACCGTCTGGACCTaGCCCTGTAGGCTGAAGCGATGTTGCCACTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KRPPMRTSTVWT*PCRLKRCCHCS Trigger: GGAGCAGTGGCAACATCGCTTCAGCCTACAGGGCCAGGTCCAGACGGTGCTGGTGCGCATGGGTGGCCTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
||
| CDS CCA 72 bp | AGAAGGAAGAGGCCACCCATGCGCACCAGCACCGTCTaGACCTGGCCCTGTAGGCTGAAGCGATGTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRKRPPMRTSTV*TWPCRLKRCCH Trigger: GTGGCAACATCGCTTCAGCCTACAGGGCCAGGTCCAGACGGTGCTGGTGCGCATGGGTGGCCTCTTCCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
||
| CDS TCA 72 bp | TGCGCACCAGCACCGTCTGGACCTGGCCCTGTAGGCTaGAGCGATGTTGCCACTGCTCCTCCTGCATGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: CAPAPSGPGPVG*SDVATAPPACR Trigger: TCTACATGCAGGAGGAGCAGTGGCAACATCGCTTCAGCCTACAGGGCCAGGTCCAGACGGTGCTGGTGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053263.9 |
||
| CDS GCA 72 bp | GGAAAAGCTGGAGCCTTTCCTTGTTCCCGGAACCCTTaGCCAGAGACAGCAGAGTGGACACAGCCCGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GKAGAFPCSRNP*PETAEWTQPGA Trigger: CGCTCCGGGCTGTGTCCACTCTGCTGTCTCTGGGCAAGGGTTCCGGGAACAAGGAAAGGCTCCAGCTTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS CCA 72 bp | CCTTGTTCCCGGAACCCTTGCCCAGAGACAGCAGAGTaGACACAGCCCGGAGCGAGAACTCCAAGACGACGA | + |
|
Preference number: 6 (lower is better) Translates to: PCSRNPCPETAE*TQPGARTPRRR Trigger: TCGTCGTCTTGGAGTTCTCGCTCCGGGCTGTGTCCACTCTGCTGTCTCTGGGCAAGGGTTCCGGGAACAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS CAA 90 bp | AGCGGGGTCCAGAATCGCACGGCCTCTGAGGAGCTCAGGAAGTCCTaGTTGATGAGAGCCACTGCCGCCAGATCACTCACAGCAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGVQNRTASEELRKS*LMRATAARSLTAKA Trigger: GGCCTTTGCTGTGAGTGATCTGGCGGCAGTGGCTCTCATCAACAAGGACTTCCTGAGCTCCTCAGAGGCCGTGCGATTCTGGACCCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
||
| CDS CAA 90 bp | GGGGTCCAGAATCGCACGGCCTCTGAGGAGCTCAGGAAGTCCTTGTaGATGAGAGCCACTGCCGCCAGATCACTCACAGCAAAGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: GVQNRTASEELRKSL*MRATAARSLTAKAT Trigger: AGTGGCCTTTGCTGTGAGTGATCTGGCGGCAGTGGCTCTCATCAACAAGGACTTCCTGAGCTCCTCAGAGGCCGTGCGATTCTGGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS TCA 72 bp | ACAGATGGTGAGCGGGGTCCAGAATCGCACGGCCTCTaGGGAGCTCAGGAAGTCCTTGTTGATGAGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: TDGERGPESHGL*GAQEVLVDESH Trigger: GTGGCTCTCATCAACAAGGACTTCCTGAGCTCCTCAGAGGCCGTGCGATTCTGGACCCCGCTCACCATCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS CAA 90 bp | CAGGAGACTGTTGAGAACCGAGACTCCAAGGGCCCCGATCAAGCCTaGCAGAAGGCTGTCGAAGAGACTGGAACCCCACTCAAAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: QETVENRDSKGPDQA*QKAVEETGTPLKGR Trigger: CCTTCCTTTGAGTGGGGTTCCAGTCTCTTCGACAGCCTTCTGCAAGGCTTGATCGGGGCCCTTGGAGTCTCGGTTCTCAACAGTCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS TCA 72 bp | CTCAGGCCACAGCTTAGCCCACAGCCCAGGGAGAACTaGCACACCAGGAAAAGCTGGAGCCTTTCCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LRPQLSPQPREN*HTRKSWSLSLF Trigger: GAACAAGGAAAGGCTCCAGCTTTTCCTGGTGTGTCAGTTCTCCCTGGGCTGTGGGCTAAGCTGTGGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS CAA 72 bp | AATCGCACGGCCTCTGAGGAGCTCAGGAAGTCCTTGTaGATGAGAGCCACTGCCGCCAGATCACTCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: NRTASEELRKSL*MRATAARSLTA Trigger: TGCTGTGAGTGATCTGGCGGCAGTGGCTCTCATCAACAAGGACTTCCTGAGCTCCTCAGAGGCCGTGCGATT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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| CDS CAA 72 bp | CAGAATCGCACGGCCTCTGAGGAGCTCAGGAAGTCCTaGTTGATGAGAGCCACTGCCGCCAGATCACTCACA | + |
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Preference number: 6 (lower is better) Translates to: QNRTASEELRKS*LMRATAARSLT Trigger: TGTGAGTGATCTGGCGGCAGTGGCTCTCATCAACAAGGACTTCCTGAGCTCCTCAGAGGCCGTGCGATTCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053263.9 ENSMUST00000143154.8 |
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