Pregenerated sensors for TMEM81 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048174Ensembl transcript IDs: ENSMUST00000058167.3, ENSMUST00000188789.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCTGCGATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTaGAGTGGAGGTGAGCGGGGCACACACACTGGGAAGTGTGGCACA | + |
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Preference number: 1 (lower is better) Translates to: KAAISTFWSIHCSER*SGGERGTHTGKCGT Trigger: TGTGCCACACTTCCCAGTGTGTGTGCCCCGCTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAATCGCAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACAGCTGCCCTGAACTACTaGGGTTACATCTTCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LGSVAQKQACKTELSLGTAALNY*GYIFPA Trigger: GGCTGGGAAGATGTAACCTCAGTAGTTCAGGGCAGC...TGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTGGAGTGGAGGTGAGCGGCTAGCCAACTCTGGCTaGGAGCCCTCTTTTGACACT | + |
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Preference number: 2 (lower is better) Translates to: ISTFWSIHCSERWSGGERLANSG*EPSFDT Trigger: AGTGTCAAAAGAGGGCTCTCAGCCAGAGTTGGCTAG...CCGCTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACAGAACCGCTGCCCTGAACTACTaGGGTTACATCTTCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: KCGTKTSLQDRTLSRDRTAALNY*GYIFPA Trigger: GGCTGGGAAGATGTAACCTCAGTAGTTCAGGGCAGC...GGTTCTGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACAGAACCCTGAGAGCCCTCTTTTaGCACTTCACCATCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: KCGTKTSLQDRTLSRDRTLRALF*HFTIRG Trigger: GCCTCTGATGGTGAAGTGTCAAAAGAGGGCTCTCAG...GGTTCTGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACATGGTGGATGCTGCCCTaGACTACTGAGGTTACATCT | + |
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Preference number: 2 (lower is better) Translates to: LGSVAQKQACKTELSLGTWWMLP*TTEVTS Trigger: AGATGTAACCTCAGTAGTTCAGGGCAGCATCCACCA...TGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| 3UTR TCA 72 bp | AGGTTACATCTTCCCAGCCTCCTAGCCAACTCTGGCTaGGAGCCCTCTTTTGACACTTCACCATCAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RLHLPSLLANSG*EPSFDTSPSEA Trigger: TGCCTCTGATGGTGAAGTGTCAAAAGAGGGCTCTCAGCCAGAGTTGGCTAGGAGGCTGGGAAGATGTAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| 3UTR-3UTR CAA 90 bp | GCGATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTGGAGTGGAGGTGAGGCTGAGAGCCCTCTTTaGACACTTCACCATCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: AISTFWSIHCSERWSGGEAESPL*TLHHQR Trigger: CCTCTGATGGTGAAGTGTCAAAAGAGGGCTCTCAGC...CTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAATCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACAGAACCGCTGAGAGCCCTCTTTaGACACTTCACCATCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: KCGTKTSLQDRTLSRDRTAESPL*TLHHQR Trigger: CCTCTGATGGTGAAGTGTCAAAAGAGGGCTCTCAGC...GGTTCTGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| 3UTR GCA 72 bp | GCACACACACTGGGAAGTGTGGCACAAAAACAAGCTTaGAAGACAGAACTCTCTCTAGGGACAGAACCTAAG | + |
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Preference number: 3 (lower is better) Translates to: AHTLGSVAQKQA*KTELSLGTEPK Trigger: CTTAGGTTCTGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAGTGTGTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR GCA 90 bp | CCAACTCTGGCTGAGAGCCCTCTTTTGACACTTCACCATCAGAGGCACACATACGGGTGCGGCCCCCACTaGCATCAGTCCCTCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PTLAESPLLTLHHQRHTYGCGPH*HQSLPG Trigger: CCCTGGGAGGGACTGATGGCAGTGGGGGCCGCACCC...GTATGTGTGCCTCTGATGGTGAAGTGTCAAAAGAGGGCTCTCAGCCAGAGTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR GCA 90 bp | CTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACAGGGTGCGGCCCCCACTaGCATCAGTCCCTCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LGSVAQKQACKTELSLGTGCGPH*HQSLPG Trigger: CCCTGGGAGGGACTGATGGCAGTGGGGGCCGCACCC...TGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR TCA 90 bp | CTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACATCCCTCCCAGGGCCTTaGAGACAGCAACGCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: LGSVAQKQACKTELSLGTSLPGP*RQQRSP Trigger: TGGTGAGCGTTGCTGTCTTCAAGGCCCTGGGAGGGA...TGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR TCA 90 bp | AAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACAGAACCTCCCTCCCAGGGCCTTaGAGACAGCAACGCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: KCGTKTSLQDRTLSRDRTSLPGP*RQQRSP Trigger: TGGTGAGCGTTGCTGTCTTCAAGGCCCTGGGAGGGA...GGTTCTGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR TCA 90 bp | ATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTGGAGTGGAGGTGAGCGGTCCCATGGACGATGGTaGAATGGAGCATCCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: ISTFWSIHCSERWSGGERSHGRW*NGASHR Trigger: TCTGTGGGATGCTCCATTTCACCATCGTCCATGGGA...CCGCTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR TCA 90 bp | CACACTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGTCCCATGGACGATGGTaGAATGGAGCATCCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: HTGKCGTKTSLQDRTLSRSHGRW*NGASHR Trigger: TCTGTGGGATGCTCCATTTCACCATCGTCCATGGGA...CCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR GCA 90 bp | ATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTGGAGTGGAGGTGAGCGGAAGCGGAAGGCTTCCTaGCCTTTCTCCAGGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: ISTFWSIHCSERWSGGERKRKAS*PFSRMS Trigger: AGACATCCTGGAGAAAGGGCAGGAAGCCTTCCGCTT...CCGCTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR GCA 90 bp | GCGATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTGGAGTGGAGGTGAGAAGCGGAAGGCTTCCTaGCCTTTCTCCAGGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: AISTFWSIHCSERWSGGEKRKAS*PFSRMS Trigger: AGACATCCTGGAGAAAGGGCAGGAAGCCTTCCGCTT...CTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAATCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR TCA 90 bp | CACACTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGTTTCTCCAGGATGTCTaGGCTGAGACAGTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: HTGKCGTKTSLQDRTLSRFLQDV*AETVQL Trigger: GAGCTGAACTGTCTCAGCTCAGACATCCTGGAGAAA...CCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CCA 90 bp | ATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTGGAGTGGAGGTGAGCGGTCCCACAGATCCAGTTaGTCACACACTCCAAACGCT | + |
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Preference number: 4 (lower is better) Translates to: ISTFWSIHCSERWSGGERSHRSS*SHTPNA Trigger: AGCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGA...CCGCTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CCA 90 bp | GCGATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTGGAGTGGAGGTGAGTGGACGATGGTGAAATaGAGCATCCCACAGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: AISTFWSIHCSERWSGGEWTMVK*SIPQIQ Trigger: CTGGATCTGTGGGATGCTCCATTTCACCATCGTCCA...CTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CCA 90 bp | CACACTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGTGGACGATGGTGAAATaGAGCATCCCACAGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: HTGKCGTKTSLQDRTLSRWTMVK*SIPQIQ Trigger: CTGGATCTGTGGGATGCTCCATTTCACCATCGTCCA...CCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR TCA 90 bp | AAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACAGAACCTTTCTCCAGGATGTCTaGGCTGAGACAGTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KCGTKTSLQDRTLSRDRTFLQDV*AETVQL Trigger: GAGCTGAACTGTCTCAGCTCAGACATCCTGGAGAAA...GGTTCTGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CCA 90 bp | AAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACAGAACCTCCCACAGATCCAGTTaGTCACACACTCCAAACGCT | + |
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Preference number: 4 (lower is better) Translates to: KCGTKTSLQDRTLSRDRTSHRSS*SHTPNA Trigger: AGCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGA...GGTTCTGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CCA 90 bp | CACACTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGTCAAACGTCTTCCCATaGACGATGGTGAAATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HTGKCGTKTSLQDRTLSRSNVFP*TMVKWS Trigger: GCTCCATTTCACCATCGTCCATGGGAAGACGTTTGA...CCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CCA 90 bp | CCAACTCTGGCTGAGAGCCCTCTTTTGACACTTCACCATCAGAGGCACACATACTCAGTAAGGGACTGTTaGAAATTTAGGTTTACCAAC | + |
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Preference number: 4 (lower is better) Translates to: PTLAESPLLTLHHQRHTYSVRDC*KFRFTN Trigger: GTTGGTAAACCTAAATTTCCAACAGTCCCTTACTGA...GTATGTGTGCCTCTGATGGTGAAGTGTCAAAAGAGGGCTCTCAGCCAGAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR TCA 90 bp | CTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACATTATCTATCAACTTCTaGTCCTCAGTAAGGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: LGSVAQKQACKTELSLGTLSINF*SSVRDC Trigger: ACAGTCCCTTACTGAGGATCAGAAGTTGATAGATAA...TGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS TCA 90 bp | ATAAGCGGGTGCGGCCCCCACTGCCATCAGTCCCTCCCAGGGCCTTaGAGACAGCAACGCTCACCAACACGCCGCCAACCACTCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ISGCGPHCHQSLPGP*RQQRSPTRRQPLQP Trigger: TGGCTGGAGTGGTTGGCGGCGTGTTGGTGAGCGTTGCTGTCTTCAAGGCCCTGGGAGGGACTGATGGCAGTGGGGGCCGCACCCGCTTAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS GCA 90 bp | GCATCCCACAGATCCAGTTGGTCACACACTCCAAACGCTGGAACGTaGAGTTTCTCCTCACTCCGTCGGGACCCACCTCGCACTCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: ASHRSSWSHTPNAGT*SFSSLRRDPPRTPS Trigger: AGACGGAGTGCGAGGTGGGTCCCGACGGAGTGAGGAGAAACTGCACGTTCCAGCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS GCA 90 bp | GAGATGATGCCCCGGGCAAGCCTCCAGGTGAAGCGGAAGGCTTCCTaGCCTTTCTCCAGGATGTCTGAGCTGAGACAGTTCAGCTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: EMMPRASLQVKRKAS*PFSRMSELRQFSSN Trigger: GTTTGAGCTGAACTGTCTCAGCTCAGACATCCTGGAGAAAGGGCAGGAAGCCTTCCGCTTCACCTGGAGGCTTGCCCGGGGCATCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS GCA 90 bp | CAACGCTCACCAACACGCCGCCAACCACTCCAGCCACAATTCCTATaGCCAAGGCCGATGTCACTTTCCTTTGCCACACAGGGAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: QRSPTRRQPLQPQFL*PRPMSLSFATQGGE Trigger: CTCACCTCCCTGTGTGGCAAAGGAAAGTGACATCGGCCTTGGGCATAGGAATTGTGGCTGGAGTGGTTGGCGGCGTGTTGGTGAGCGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CCA 90 bp | AAATGGAGCATCCCACAGATCCAGTTGGTCACACACTCCAAACGCTaGAACGTGCAGTTTCTCCTCACTCCGTCGGGACCCACCTCGCAC | + |
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Preference number: 5 (lower is better) Translates to: KWSIPQIQLVTHSKR*NVQFLLTPSGPTSH Trigger: GTGCGAGGTGGGTCCCGACGGAGTGAGGAGAAACTGCACGTTCCAGCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGATGCTCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS TCA 90 bp | CCTCCAGGTGAAGCGGAAGGCTTCCTGCCCTTTCTCCAGGATGTCTaGGCTGAGACAGTTCAGCTCAAACGTCTTCCCATGGACGATGGT | + |
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Preference number: 5 (lower is better) Translates to: PPGEAEGFLPFLQDV*AETVQLKRLPMDDG Trigger: ACCATCGTCCATGGGAAGACGTTTGAGCTGAACTGTCTCAGCTCAGACATCCTGGAGAAAGGGCAGGAAGCCTTCCGCTTCACCTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS TCA 90 bp | CCTATGCCCAAGGCCGATGTCACTTTCCTTTGCCACACAGGGAGGTaGGGCTTAGACCCATTGTCCAGATTAACTTCCCAGCCCTTATCT | + |
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Preference number: 5 (lower is better) Translates to: PMPKADVTFLCHTGR*GLDPLSRLTSQPLS Trigger: AGATAAGGGCTGGGAAGTTAATCTGGACAATGGGTCTAAGCCTCACCTCCCTGTGTGGCAAAGGAAAGTGACATCGGCCTTGGGCATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CCA 90 bp | CTGAGACAGTTCAGCTCAAACGTCTTCCCATGGACGATGGTGAAATaGAGCATCCCACAGATCCAGTTGGTCACACACTCCAAACGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LRQFSSNVFPWTMVK*SIPQIQLVTHSKRW Trigger: CCAGCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGATGCTCCATTTCACCATCGTCCATGGGAAGACGTTTGAGCTGAACTGTCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CAA 90 bp | CCAACTCTGGCTGAGAGCCCTCTTTTGACACTTCACCATCAGAGGCACACATACATCCCACAGATCCAGTaGGTCACACACTCCAAACGC | + |
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Preference number: 5 (lower is better) Translates to: PTLAESPLLTLHHQRHTYIPQIQ*VTHSKR Trigger: GCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGAT...GTATGTGTGCCTCTGATGGTGAAGTGTCAAAAGAGGGCTCTCAGCCAGAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CCA 90 bp | TCCAGGATGTCTGAGCTGAGACAGTTCAGCTCAAACGTCTTCCCATaGACGATGGTGAAATGGAGCATCCCACAGATCCAGTTGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: SRMSELRQFSSNVFP*TMVKWSIPQIQLVT Trigger: TGTGACCAACTGGATCTGTGGGATGCTCCATTTCACCATCGTCCATGGGAAGACGTTTGAGCTGAACTGTCTCAGCTCAGACATCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CAA 90 bp | GCGATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTGGAGTGGAGGTGAGCTGCATCCTGTGGCATaGACAATGACTCTCCCCACG | + |
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Preference number: 5 (lower is better) Translates to: AISTFWSIHCSERWSGGELHPVA*TMTLPT Trigger: CGTGGGGAGAGTCATTGTCAATGCCACAGGATGCAG...CTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAATCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACAGAACCCTGCATCCTGTGGCATaGACAATGACTCTCCCCACG | + |
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Preference number: 5 (lower is better) Translates to: KCGTKTSLQDRTLSRDRTLHPVA*TMTLPT Trigger: CGTGGGGAGAGTCATTGTCAATGCCACAGGATGCAG...GGTTCTGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CAA 90 bp | GCGATTAGTACATTCTGGTCAATACACTGTTCAGAGAGGTGGAGTGGAGGTGAGATCCCACAGATCCAGTaGGTCACACACTCCAAACGC | + |
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Preference number: 5 (lower is better) Translates to: AISTFWSIHCSERWSGGEIPQIQ*VTHSKR Trigger: GCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGAT...CTCACCTCCACTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAATCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CCA 90 bp | CAGCTGCACGTCACATCGATACGTCCCAGCGTTATACTCATAGGCTaGTTTAAATCCTATAAAGGGGGAATTGGCTCGGAAGGGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: QLHVTSIRPSVILIG*FKSYKGGIGSEGSE Trigger: TTCAGACCCTTCCGAGCCAATTCCCCCTTTATAGGATTTAAACCAGCCTATGAGTATAACGCTGGGACGTATCGATGTGACGTGCAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS-3UTR CAA 90 bp | CTGGGAAGTGTGGCACAAAAACAAGCTTGCAAGACAGAACTCTCTCTAGGGACATTAGGTTTACCAACTTaGGAGGAAGGACCCTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: LGSVAQKQACKTELSLGTLGLPT*EEGPSV Trigger: GACTGAGGGTCCTTCCTCCAAAGTTGGTAAACCTAA...TGTCCCTAGAGAGAGTTCTGTCTTGCAAGCTTGTTTTTGTGCCACACTTCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS TCA 90 bp | GACCCATTGTCCAGATTAACTTCCCAGCCCTTATCTATCAACTTCTaGTCCTCAGTAAGGGACTGTTGGAAATTTAGGTTTACCAACTTT | + |
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Preference number: 5 (lower is better) Translates to: DPLSRLTSQPLSINF*SSVRDCWKFRFTNF Trigger: AAAGTTGGTAAACCTAAATTTCCAACAGTCCCTTACTGAGGATCAGAAGTTGATAGATAAGGGCTGGGAAGTTAATCTGGACAATGGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CAA 90 bp | CATAAGCGGGTGCGGCCCCCACTGCCATCAGTCCCTCCCAGGGCCTaGAAGACAGCAACGCTCACCAACACGCCGCCAACCACTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: HKRVRPPLPSVPPRA*KTATLTNTPPTTPA Trigger: GGCTGGAGTGGTTGGCGGCGTGTTGGTGAGCGTTGCTGTCTTCAAGGCCCTGGGAGGGACTGATGGCAGTGGGGGCCGCACCCGCTTATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS GCA 72 bp | AGATCCAGTTGGTCACACACTCCAAACGCTGGAACGTaGAGTTTCTCCTCACTCCGTCGGGACCCACCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RSSWSHTPNAGT*SFSSLRRDPPR Trigger: GCGAGGTGGGTCCCGACGGAGTGAGGAGAAACTGCACGTTCCAGCGTTTGGAGTGTGTGACCAACTGGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS GCA 72 bp | CCAACACGCCGCCAACCACTCCAGCCACAATTCCTATaGCCAAGGCCGATGTCACTTTCCTTTGCCACACAG | + |
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Preference number: 6 (lower is better) Translates to: PTRRQPLQPQFL*PRPMSLSFATQ Trigger: CTGTGTGGCAAAGGAAAGTGACATCGGCCTTGGGCATAGGAATTGTGGCTGGAGTGGTTGGCGGCGTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CCA 72 bp | ATCCCACAGATCCAGTTGGTCACACACTCCAAACGCTaGAACGTGCAGTTTCTCCTCACTCCGTCGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: IPQIQLVTHSKR*NVQFLLTPSGP Trigger: GGGTCCCGACGGAGTGAGGAGAAACTGCACGTTCCAGCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS TCA 72 bp | GGAAGGCTTCCTGCCCTTTCTCCAGGATGTCTGAGCTaGGACAGTTCAGCTCAAACGTCTTCCCATGGACGA | + |
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Preference number: 6 (lower is better) Translates to: GRLPALSPGCLS*DSSAQTSSHGR Trigger: TCGTCCATGGGAAGACGTTTGAGCTGAACTGTCTCAGCTCAGACATCCTGGAGAAAGGGCAGGAAGCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS TCA 72 bp | GAAGCGGAAGGCTTCCTGCCCTTTCTCCAGGATGTCTaGGCTGAGACAGTTCAGCTCAAACGTCTTCCCATG | + |
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Preference number: 6 (lower is better) Translates to: EAEGFLPFLQDV*AETVQLKRLPM Trigger: CATGGGAAGACGTTTGAGCTGAACTGTCTCAGCTCAGACATCCTGGAGAAAGGGCAGGAAGCCTTCCGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CAA 72 bp | CACAATTCCTATGCCCAAGGCCGATGTCACTTTCCTTaGCCACACAGGGAGGTGAGGCTTAGACCCATTGTC | + |
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Preference number: 6 (lower is better) Translates to: HNSYAQGRCHFP*PHREVRLRPIV Trigger: GACAATGGGTCTAAGCCTCACCTCCCTGTGTGGCAAAGGAAAGTGACATCGGCCTTGGGCATAGGAATTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CAA 90 bp | GTCTTCCCATGGACGATGGTGAAATGGAGCATCCCACAGATCCAGTaGGTCACACACTCCAAACGCTGGAACGTGCAGTTTCTCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: VFPWTMVKWSIPQIQ*VTHSKRWNVQFLLT Trigger: AGTGAGGAGAAACTGCACGTTCCAGCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGATGCTCCATTTCACCATCGTCCATGGGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CAA 90 bp | CACTCCAGCCACAATTCCTATGCCCAAGGCCGATGTCACTTTCCTTaGCCACACAGGGAGGTGAGGCTTAGACCCATTGTCCAGATTAAC | + |
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Preference number: 6 (lower is better) Translates to: HSSHNSYAQGRCHFP*PHREVRLRPIVQIN Trigger: GTTAATCTGGACAATGGGTCTAAGCCTCACCTCCCTGTGTGGCAAAGGAAAGTGACATCGGCCTTGGGCATAGGAATTGTGGCTGGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS TCA 72 bp | AAGGCCGATGTCACTTTCCTTTGCCACACAGGGAGGTaGGGCTTAGACCCATTGTCCAGATTAACTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: KADVTFLCHTGR*GLDPLSRLTSQ Trigger: CTGGGAAGTTAATCTGGACAATGGGTCTAAGCCTCACCTCCCTGTGTGGCAAAGGAAAGTGACATCGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CCA 72 bp | TTCAGCTCAAACGTCTTCCCATGGACGATGGTGAAATaGAGCATCCCACAGATCCAGTTGGTCACACACTCC | + |
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Preference number: 6 (lower is better) Translates to: FSSNVFPWTMVK*SIPQIQLVTHS Trigger: GGAGTGTGTGACCAACTGGATCTGTGGGATGCTCCATTTCACCATCGTCCATGGGAAGACGTTTGAGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CCA 72 bp | TCTGAGCTGAGACAGTTCAGCTCAAACGTCTTCCCATaGACGATGGTGAAATGGAGCATCCCACAGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: SELRQFSSNVFP*TMVKWSIPQIQ Trigger: CTGGATCTGTGGGATGCTCCATTTCACCATCGTCCATGGGAAGACGTTTGAGCTGAACTGTCTCAGCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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| CDS CAA 72 bp | TGGACGATGGTGAAATGGAGCATCCCACAGATCCAGTaGGTCACACACTCCAAACGCTGGAACGTGCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: WTMVKWSIPQIQ*VTHSKRWNVQF Trigger: AAACTGCACGTTCCAGCGTTTGGAGTGTGTGACCAACTGGATCTGTGGGATGCTCCATTTCACCATCGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058167.3 ENSMUST00000188789.2 |
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