Pregenerated sensors for TMEM80 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025505Ensembl transcript IDs: ENSMUST00000026578.14, ENSMUST00000126510.8, ENSMUST00000128906.2, ENSMUST00000132061.2, ENSMUST00000133012.8, ENSMUST00000145184.8
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACCAGGTAGGCTGGCTTTGAACTCACAAAGATATGCCCATCTTTaGCTCCTGGGTGCTGGGACTAAAAGGTTTGTGTGCCACCATACC | + |
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Preference number: 1 (lower is better) Translates to: RPGRLALNSQRYAHL*LLGAGTKRFVCHHT Trigger: GGTATGGTGGCACACAAACCTTTTAGTCCCAGCACCCAGGAGGCAAAGATGGGCATATCTTTGTGAGTTCAAAGCCAGCCTACCTGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR TCA 90 bp | CAAGACCTGAGAAGACATTTCTGGGATTCACTAGGCTCCTGTCCATaGTGGTCATCTTCAAGCTTCCAAGTTTGTCCCTCCCTGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: QDLRRHFWDSLGSCP*WSSSSFQVCPSLAL Trigger: CAGAGCCAGGGAGGGACAAACTTGGAAGCTTGAAGATGACCATCATGGACAGGAGCCTAGTGAATCCCAGAAATGTCTTCTCAGGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACAGGCTCGACAGTCTCCTTGTCTaGGCCAAGGAACCTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SRGIPALDQGLATKYNRLDSLLV*AKEPAE Trigger: CTCAGCAGGTTCCTTGGCCCAGACAAGGAGACTGTC...GAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACAGGCTCTGACAGTCTCCTTGTCTaGGCCAAGGAACCTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PEGSQPWTKVWQLSTTGSDSLLV*AKEPAE Trigger: CTCAGCAGGTTCCTTGGCCCAGACAAGGAGACTGTC...AGAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATCTACAAAGGCTGCAGTTTGGTGGACTGCGACTCCCAGAATCATAGACTAGGGGCTGAGACAAGGTaGAGCTGCAGGGCTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GIYKGCSLVDCDSQNHRLGAETR*SCRAAP Trigger: AGGGGCAGCCCTGCAGCTCCACCTTGTCTCAGCCCC...TAGTCTATGATTCTGGGAGTCGCAGTCCACCAAACTGCAGCCTTTGTAGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000145184.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACAGGCTCGCAAACACAGGGTGGTaGCCAGCACAGTTTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: SRGIPALDQGLATKYNRLANTGW*PAQFVH Trigger: GTGTACAAACTGTGCTGGTCACCACCCTGTGTTTGC...GAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTCCCGCTATAGTCAGCACCCCAGCCACAAGACCTGAGAAGACATTTCTGGACAGTCTCCTTGTCTaGGCCAAGGAACCTGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GGPAIVSTPATRPEKTFLDSLLV*AKEPAE Trigger: CTCAGCAGGTTCCTTGGCCCAGACAAGGAGACTGTC...CAGAAATGTCTTCTCAGGTCTTGTGGCTGGGGTGCTGACTATAGCGGGACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGATGAGATTCATTTGGCATCTACAAAGGCTGCAGTTTGGTGGACTGCGAGGGGCTGAGACAAGGTaGAGCTGCAGGGCTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: QEMRFIWHLQRLQFGGLRGAETR*SCRAAP Trigger: AGGGGCAGCCCTGCAGCTCCACCTTGTCTCAGCCCC...TCGCAGTCCACCAAACTGCAGCCTTTGTAGATGCCAAATGAATCTCATCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000145184.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAGCTCCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACCCCAGCCACAAGACCTaGGAAGACATTTCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: CSSRGIPALDQGLATKYNPSHKT*EDISGI Trigger: AATCCCAGAAATGTCTTCTCAGGTCTTGTGGCTGGG...GTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGGAGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAAACACAGGGTGGTGACCAGCACAGTTTGTACACTCCTGCCAGGAAGCCATGACAGTCTCCTTGTCTaGGCCAAGGAACCTGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SKHRVVTSTVCTLLPGSHDSLLV*AKEPAE Trigger: CTCAGCAGGTTCCTTGGCCCAGACAAGGAGACTGTC...ATGGCTTCCTGGCAGGAGTGTACAAACTGTGCTGGTCACCACCCTGTGTTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGATGGGGGGGGCTGAGACAAGGTaGAGCTGCAGGGCTGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: FCFLLETKQFHFRAGLMGGAETR*SCRAAP Trigger: AGGGGCAGCCCTGCAGCTCCACCTTGTCTCAGCCCC...CCCCATCAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAA 54% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACAGGCTCTCAGTTTGTACACTCCTaGCAGGAAGCCATGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PEGSQPWTKVWQLSTTGSQFVHS*QEAMFL Trigger: CAGAAACATGGCTTCCTGGCAGGAGTGTACAAACTG...AGAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATCTACAAAGGCTGCAGTTTGGTGGACTGCGACTCCCAGAATCATAGACTAACAAGGCTGCCATCCTaGAGCTCCAGAGGGATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GIYKGCSLVDCDSQNHRLTRLPS*SSRGIP Trigger: TGGGATCCCTCTGGAGCTGCAGGATGGCAGCCTTGT...TAGTCTATGATTCTGGGAGTCGCAGTCCACCAAACTGCAGCCTTTGTAGATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000145184.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTTTGAACTCACAAAGATATGCCCATCTTTGCCTCCTGGGTGCTGGGACTACTGGAACACAAGGCTaGCATCCTGCAGCTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LALNSQRYAHLCLLGAGTTGTQG*HPAAPE Trigger: CTCTGGAGCTGCAGGATGGCAGCCTTGTGTTCCAGT...AGTCCCAGCACCCAGGAGGCAAAGATGGGCATATCTTTGTGAGTTCAAAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR TCA 90 bp | CAAACACAGGGTGGTGACCAGCACAGTTTGTACACTCCTGCCAGGAAGCCATGTCCCAGCCACAAGACCTaGGAAGACATTTCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: QTQGGDQHSLYTPARKPCPSHKT*EDISGI Trigger: AATCCCAGAAATGTCTTCTCAGGTCTTGTGGCTGGG...ACATGGCTTCCTGGCAGGAGTGTACAAACTGTGCTGGTCACCACCCTGTGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGATGGGGGAGACAAGGTGGAGCTaGAGGGCTGCCCCTAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: FCFLLETKQFHFRAGLMGETRWS*RAAPSH Trigger: ATGGCTAGGGGCAGCCCTGCAGCTCCACCTTGTCTC...CCCCATCAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGACTTGCAAATCACTATGTAGACCAGGTAGGCTGGCTTTGAACTCACAAACAAGGCTGCCATCCTaGAGCTCCAGAGGGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: WVTCKSLCRPGRLALNSQTRLPS*SSRGIP Trigger: TGGGATCCCTCTGGAGCTGCAGGATGGCAGCCTTGT...TTGTGAGTTCAAAGCCAGCCTACCTGGTCTACATAGTGATTTGCAAGTCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGGTGACTTGCAAATCACTATGTAGACCAGGTAGGCTGGCTTTGAACTCAAGATATGCCCATCTTTaGCTCCTGGGTGCTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: PWVTCKSLCRPGRLALNSRYAHL*LLGAGT Trigger: AGTCCCAGCACCCAGGAGGCAAAGATGGGCATATCT...TGAGTTCAAAGCCAGCCTACCTGGTCTACATAGTGATTTGCAAGTCACCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGGTGACTTGCAAATCACTATGTAGACCAGGTAGGCTGGCTTTGAACTCACCCATCTTTGCCTCCTaGGTGCTGGGACTAAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PWVTCKSLCRPGRLALNSPIFAS*VLGLKG Trigger: ACCTTTTAGTCCCAGCACCCAGGAGGCAAAGATGGG...TGAGTTCAAAGCCAGCCTACCTGGTCTACATAGTGATTTGCAAGTCACCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATCTACAAAGGCTGCAGTTTGGTGGACTGCGACTCCCAGAATCATAGACTAACCCATGAAAGGGGCTaGGATGGTCATAATACCCAG | + |
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Preference number: 2 (lower is better) Translates to: GIYKGCSLVDCDSQNHRLTHERG*DGHNTQ Trigger: CTGGGTATTATGACCATCTCAGCCCCTTTCATGGGT...TAGTCTATGATTCTGGGAGTCGCAGTCCACCAAACTGCAGCCTTTGTAGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAAACACAGGGTGGTGACCAGCACAGTTTGTACACTCCTGCCAGGAAGCCATCTGAGAAGACATTTCTaGGATTCACTAGGCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SKHRVVTSTVCTLLPGSHLRRHF*DSLGSC Trigger: ACAGGAGCCTAGTGAATCCCAGAAATGTCTTCTCAG...ATGGCTTCCTGGCAGGAGTGTACAAACTGTGCTGGTCACCACCCTGTGTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGATGGGGGCAAACACAGGGTGGTaGCCAGCACAGTTTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: FCFLLETKQFHFRAGLMGANTGW*PAQFVH Trigger: GTGTACAAACTGTGCTGGTCACCACCCTGTGTTTGC...CCCCATCAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCCATGAAAGGGGCTGAGATGGTCATAATACCCAGCTCTCTGTATACTTTTCCCATCTTTGCCTCCTaGGTGCTGGGACTAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PPMKGAEMVIIPSSLYTFPIFAS*VLGLKG Trigger: ACCTTTTAGTCCCAGCACCCAGGAGGCAAAGATGGG...AAAAGTATACAGAGAGCTGGGTATTATGACCATCTCAGCCCCTTTCATGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000145184.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGATGGGGCCCAGCCACAAGACCTaGGAAGACATTTCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: FCFLLETKQFHFRAGLMGPSHKT*EDISGI Trigger: AATCCCAGAAATGTCTTCTCAGGTCTTGTGGCTGGG...CCCCATCAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGCTTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGCCCTGGACCAAGGTCTaGCAACTAAGTACAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: ICFCFLLETKQFHFRAGLPWTKV*QLSTTG Trigger: GCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGG...CAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAAGCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGGTGGACTGCGACTCCCAGAATCATAGACTAAAAGCGGTTCTTTTATTCAAATTGGAGGGCCACTaGAACACAAGGCTGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: SLVDCDSQNHRLKAVLLFKLEGH*NTRLPS Trigger: GGATGGCAGCCTTGTGTTCCAGTGGCCCTCCAATTT...GAATAAAAGAACCGCTTTTAGTCTATGATTCTGGGAGTCGCAGTCCACCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000145184.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGCTTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGAAATTGGAGGGCCACTaGAACACAAGGCTGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: ICFCFLLETKQFHFRAGLKLEGH*NTRLPS Trigger: GGATGGCAGCCTTGTGTTCCAGTGGCCCTCCAATTT...CAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAAGCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR GCA 72 bp | GGGGAGCCAAATTGGAGGGCCACTGGAACACAAGGCTaGCATCCTGCAGCTCCAGAGGGATCCCAGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: GEPNWRATGTQG*HPAAPEGSQPW Trigger: CCAGGGCTGGGATCCCTCTGGAGCTGCAGGATGGCAGCCTTGTGTTCCAGTGGCCCTCCAATTTGGCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR CCA 72 bp | GGCTGCCATCCTGCAGCTCCAGAGGGATCCCAGCCCTaGACCAAGGTCTGGCAACTAAGTACAACAGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: GCHPAAPEGSQP*TKVWQLSTTGS Trigger: AGAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGGAGCTGCAGGATGGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CAA 90 bp | CTGATGGGGAGCCAAATTGGAGGGCCACTGGAACACAAGGCTGCCATCCTGCAGTTCAAGCTTCCAAGTTaGTCCCTCCCTGGCTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: LMGSQIGGPLEHKAAILQFKLPS*SLPGSG Trigger: ACCAGAGCCAGGGAGGGACAAACTTGGAAGCTTGAA...CTGCAGGATGGCAGCCTTGTGTTCCAGTGGCCCTCCAATTTGGCTCCCCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR CCA 72 bp | GCAGCTCCAGAGGGATCCCAGCCCTGGACCAAGGTCTaGCAACTAAGTACAACAGGCTCTCAGAACAAGACC | + |
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Preference number: 3 (lower is better) Translates to: AAPEGSQPWTKV*QLSTTGSQNKT Trigger: GGTCTTGTTCTGAGAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGGAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR CCA 72 bp | GTTTCATTTCAGGGCTGGCCTGATGGGGAGCCAAATTaGAGGGCCACTGGAACACAAGGCTGCCATCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: VSFQGWPDGEPN*RATGTQGCHPA Trigger: TGCAGGATGGCAGCCTTGTGTTCCAGTGGCCCTCCAATTTGGCTCCCCATCAGGCCAGCCCTGAAATGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR TCA 72 bp | GAGACAAGGTGGAGCTGCAGGGCTGCCCCTAGCCATTaGCTTCCTGAAAGGCTTTACCTTCTACTGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ETRWSCRAAPSH*LPERLYLLLSG Trigger: CCCAGACAGTAGAAGGTAAAGCCTTTCAGGAAGTCAATGGCTAGGGGCAGCCCTGCAGCTCCACCTTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CAA 90 bp | GGCATCTACAAAGGCTGCAGTTTGGTGGACTGCGACTCCCAGAATCATAGACTAGGTGACCAGCACAGTTaGTACACTCCTGCCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GIYKGCSLVDCDSQNHRLGDQHS*YTPARK Trigger: CTTCCTGGCAGGAGTGTACAAACTGTGCTGGTCACC...TAGTCTATGATTCTGGGAGTCGCAGTCCACCAAACTGCAGCCTTTGTAGATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000145184.8 |
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| 3UTR-3UTR CAA 90 bp | GAACTCAGTAATCCGTGTGTGAGCAAACACAGGGTGGTGACCAGCACAGTTTGTTTCAAGCTTCCAAGTTaGTCCCTCCCTGGCTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: ELSNPCVSKHRVVTSTVCFKLPS*SLPGSG Trigger: ACCAGAGCCAGGGAGGGACAAACTTGGAAGCTTGAA...ACAAACTGTGCTGGTCACCACCCTGTGTTTGCTCACACACGGATTACTGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR TCA 72 bp | TTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTaGTGGGGAGCCAAATTGGAGGGCCACTGGAACACA | + |
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Preference number: 3 (lower is better) Translates to: FWKPSSFISGLA*WGAKLEGHWNT Trigger: TGTGTTCCAGTGGCCCTCCAATTTGGCTCCCCATCAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR GCA 72 bp | AGGCTGGCTTTGAACTCACAAAGATATGCCCATCTTTaGCTCCTGGGTGCTGGGACTAAAAGGTTTGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: RLALNSQRYAHL*LLGAGTKRFVC Trigger: GCACACAAACCTTTTAGTCCCAGCACCCAGGAGGCAAAGATGGGCATATCTTTGTGAGTTCAAAGCCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGATGGGGTTCAAGCTTCCAAGTTaGTCCCTCCCTGGCTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: FCFLLETKQFHFRAGLMGFKLPS*SLPGSG Trigger: ACCAGAGCCAGGGAGGGACAAACTTGGAAGCTTGAA...CCCCATCAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR-3UTR CAA 90 bp | ATTTGCTTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGTTCAAGCTTCCAAGTTaGTCCCTCCCTGGCTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: ICFCFLLETKQFHFRAGLFKLPS*SLPGSG Trigger: ACCAGAGCCAGGGAGGGACAAACTTGGAAGCTTGAA...CAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAAGCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR TCA 72 bp | CTTGCAAATCACTATGTAGACCAGGTAGGCTGGCTTTaGACTCACAAAGATATGCCCATCTTTGCCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LANHYVDQVGWL*THKDMPIFASW Trigger: CCAGGAGGCAAAGATGGGCATATCTTTGTGAGTTCAAAGCCAGCCTACCTGGTCTACATAGTGATTTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| 3UTR GCA 72 bp | CTTTGCCTCCTGGGTGCTGGGACTAAAAGGTTTGTGTaGCACCATACCTGGAATACATTTGCTTTTGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: LCLLGAGTKRFV*HHTWNTFAFVS Trigger: GGAAACAAAAGCAAATGTATTCCAGGTATGGTGGCACACAAACCTTTTAGTCCCAGCACCCAGGAGGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| CDS-3UTR TCA 90 bp | TCTGGGCCAAGGAACCTGCTGAGGGCTAAGGAGCAGTGCTGTGCAGGTTACCCTGGCCACCGACTGCTGTaGATGCCAGGCTGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGPRNLLRAKEQCCAGYPGHRLL*MPGWQP Trigger: TGGCTGCCAGCCTGGCATTCACAGCAGTCGGTGGCC...AGGGTAACCTGCACAGCACTGCTCCTTAGCCCTCAGCAGGTTCCTTGGCCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCAAGGAACCTGCTGAGGGCTAAGGAGCAGTGCTGTGCAGGTTACCCTGCTACCGACTGCTGTGAATaGCAGGCTGGCAGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRNLLRAKEQCCAGYPATDCCE*QAGSQW Trigger: CCACTGGCTGCCAGCCTGGCATTCACAGCAGTCGGT...AGCAGGGTAACCTGCACAGCACTGCTCCTTAGCCCTCAGCAGGTTCCTTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGGCCAAGGAACCTGCTGAGGGCTAAGGAGCAGTGCTGTGCAGGTTACCCTCCAGCCTCCAGCCCATaGAGCACCAGGAGAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGPRNLLRAKEQCCAGYPPASSP*STRRTV Trigger: CACCGTTCTCCTGGTGCTGCATGGGCTGGAGGCTGG...AGGGTAACCTGCACAGCACTGCTCCTTAGCCCTCAGCAGGTTCCTTGGCCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGGGGATCATGGTGGTCCCGCTATAGTCAGCACCCCAGCCACAAGACCTACCGACTGCTGTGAATaGCAGGCTGGCAGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGDHGGPAIVSTPATRPTDCCE*QAGSQW Trigger: CCACTGGCTGCCAGCCTGGCATTCACAGCAGTCGGT...AGGTCTTGTGGCTGGGGTGCTGACTATAGCGGGACCACCATGATCCCCAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCTCCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACCCAGCCTCCAGCCCATaGAGCACCAGGAGAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSSRGIPALDQGLATKYNPASSP*STRRTV Trigger: CACCGTTCTCCTGGTGCTGCATGGGCTGGAGGCTGG...GTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGGAGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACAGGCTCCCAGCCTCCAGCCCATaGAGCACCAGGAGAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRGIPALDQGLATKYNRLPASSP*STRRTV Trigger: CACCGTTCTCCTGGTGCTGCATGGGCTGGAGGCTGG...GAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCCAAGGAACCTGCTGAGGGCTAAGGAGCAGTGCTGTGCAGGTTACCCTCAGGCTGGCAGCCAGTaGCACTTCAGCCTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGPRNLLRAKEQCCAGYPQAGSQ*HFSLHQ Trigger: CTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCCTG...AGGGTAACCTGCACAGCACTGCTCCTTAGCCCTCAGCAGGTTCCTTGGCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR TCA 90 bp | CAAACACAGGGTGGTGACCAGCACAGTTTGTACACTCCTGCCAGGAAGCCATGTGGCCACCGACTGCTGTaGATGCCAGGCTGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTQGGDQHSLYTPARKPCGHRLL*MPGWQP Trigger: TGGCTGCCAGCCTGGCATTCACAGCAGTCGGTGGCC...ACATGGCTTCCTGGCAGGAGTGTACAAACTGTGCTGGTCACCACCCTGTGTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACAGGCTCCAGGCTGGCAGCCAGTaGCACTTCAGCCTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRGIPALDQGLATKYNRLQAGSQ*HFSLHQ Trigger: CTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCCTG...GAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGCCAAGGAACCTGCTGAGGGCTAAGGAGCAGTGCTGTGCAGGTTACCCTTGCCAGAGTAGGAAGTaGACAGAAAGGAGGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SGPRNLLRAKEQCCAGYPCQSRK*TERRPP Trigger: CGGTGGCCTCCTTTCTGTTCACTTCCTACTCTGGCA...AGGGTAACCTGCACAGCACTGCTCCTTAGCCCTCAGCAGGTTCCTTGGCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR TCA 90 bp | CTGATGGGGAGCCAAATTGGAGGGCCACTGGAACACAAGGCTGCCATCCTGCAGTGCCAGAGTAGGAAGTaGACAGAAAGGAGGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LMGSQIGGPLEHKAAILQCQSRK*TERRPP Trigger: CGGTGGCCTCCTTTCTGTTCACTTCCTACTCTGGCA...CTGCAGGATGGCAGCCTTGTGTTCCAGTGGCCCTCCAATTTGGCTCCCCATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR CCA 90 bp | CAAACACAGGGTGGTGACCAGCACAGTTTGTACACTCCTGCCAGGAAGCCATGTCAGGCTGGCAGCCAGTaGCACTTCAGCCTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTQGGDQHSLYTPARKPCQAGSQ*HFSLHQ Trigger: CTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCCTG...ACATGGCTTCCTGGCAGGAGTGTACAAACTGTGCTGGTCACCACCCTGTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCAGCGTGGGAAGCACAGAACTCAGTAATCCGTGTGTGAGCAAACACAGGTGCCAGAGTAGGAAGTaGACAGAAAGGAGGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RASVGSTELSNPCVSKHRCQSRK*TERRPP Trigger: CGGTGGCCTCCTTTCTGTTCACTTCCTACTCTGGCA...CCTGTGTTTGCTCACACACGGATTACTGAGTTCTGTGCTTCCCACGCTGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | GTCCATGATGGTCATCTTCAAGCTTCCAAGTTTGTCCCTCCCTGGCTCTGGTATCCAGCCTCCAGCCCATaGAGCACCAGGAGAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHDGHLQASKFVPPWLWYPASSP*STRRTV Trigger: CACCGTTCTCCTGGTGCTGCATGGGCTGGAGGCTGG...ATACCAGAGCCAGGGAGGGACAAACTTGGAAGCTTGAAGATGACCATCATGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTTGAACTCACAAAGATATGCCCATCTTTGCCTCCTGGGTGCTGGGACTCAGGCTGGCAGCCAGTaGCACTTCAGCCTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LALNSQRYAHLCLLGAGTQAGSQ*HFSLHQ Trigger: CTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCCTG...AGTCCCAGCACCCAGGAGGCAAAGATGGGCATATCTTTGTGAGTTCAAAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| 3UTR CAA 72 bp | GTGTGTGAGCAAACACAGGGTGGTGACCAGCACAGTTaGTACACTCCTGCCAGGAAGCCATGTTTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VCEQTQGGDQHS*YTPARKPCFWG Trigger: GCCCCAGAAACATGGCTTCCTGGCAGGAGTGTACAAACTGTGCTGGTCACCACCCTGTGTTTGCTCACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCAAGGAACCTGCTGAGGGCTAAGGAGCAGTGCTGTGCAGGTTACCCTGCTAGAGCTGAGCTACTTTaGGAATTCCCATCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRNLLRAKEQCCAGYPARAELL*EFPSEA Trigger: TGCTTCTGATGGGAATTCTCAAAGTAGCTCAGCTCT...AGCAGGGTAACCTGCACAGCACTGCTCCTTAGCCCTCAGCAGGTTCCTTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000133012.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGGAACCTGCTGAGGGCTAAGGAGCAGTGCTGTGCAGGTTACCCTGCTCCATCAGGTTGCCTTTTGTaGCTAGGTAGAGCTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PRNLLRAKEQCCAGYPAPSGCLL*LGRAEL Trigger: TAGCTCAGCTCTACCTAGGCACAAAAGGCAACCTGA...TGGAGCAGGGTAACCTGCACAGCACTGCTCCTTAGCCCTCAGCAGGTTCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000133012.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGGAACCTGCTGAGGGCTAAGGAGCAGTGCTGTGCAGGTTACCCTGCTCCAAGAGCTGAGCTACTTTaGGAATTCCCATCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRNLLRAKEQCCAGYPAPRAELL*EFPSEA Trigger: TGCTTCTGATGGGAATTCTCAAAGTAGCTCAGCTCT...TGGAGCAGGGTAACCTGCACAGCACTGCTCCTTAGCCCTCAGCAGGTTCCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000133012.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGTCCCGCTATAGTCAGCACCCCAGCCACAAGACCTGAGAAGACATTTCTGAGAGCTGAGCTACTTTaGGAATTCCCATCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGPAIVSTPATRPEKTFLRAELL*EFPSEA Trigger: TGCTTCTGATGGGAATTCTCAAAGTAGCTCAGCTCT...CAGAAATGTCTTCTCAGGTCTTGTGGCTGGGGTGCTGACTATAGCGGGACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000133012.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCTTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGCCAGCCTCCAGCCCATaGAGCACCAGGAGAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ICFCFLLETKQFHFRAGLPASSP*STRRTV Trigger: CACCGTTCTCCTGGTGCTGCATGGGCTGGAGGCTGG...CAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAAGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCTCCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACCAGCCTCCATCAGGTTaGCTTTTGTGCTTTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: CSSRGIPALDQGLATKYNQPPSG*LLCFCI Trigger: TATACAAAAGCACAAAAGGCAACCTGATGGAGGCTG...GTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGGAGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCTTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGCAGGCTGGCAGCCAGTaGCACTTCAGCCTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICFCFLLETKQFHFRAGLQAGSQ*HFSLHQ Trigger: CTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCCTG...CAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAAGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | GTCCATGATGGTCATCTTCAAGCTTCCAAGTTTGTCCCTCCCTGGCTCTGGTATTCAGGTTGCCTTTTGTaGCTAGGTAGAGCTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VHDGHLQASKFVPPWLWYSGCLL*LGRAEL Trigger: TAGCTCAGCTCTACCTAGGCACAAAAGGCAACCTGA...ATACCAGAGCCAGGGAGGGACAAACTTGGAAGCTTGAAGATGACCATCATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000133012.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGTGCCAGAGTAGGAAGTaGACAGAAAGGAGGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: ICFCFLLETKQFHFRAGLCQSRK*TERRPP Trigger: CGGTGGCCTCCTTTCTGTTCACTTCCTACTCTGGCA...CAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAAGCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGTGGACTGCGACTCCCAGAATCATAGACTAAAAGCGGTTCTTTTATTCTGCCAGAGTAGGAAGTaGACAGAAAGGAGGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SLVDCDSQNHRLKAVLLFCQSRK*TERRPP Trigger: CGGTGGCCTCCTTTCTGTTCACTTCCTACTCTGGCA...GAATAAAAGAACCGCTTTTAGTCTATGATTCTGGGAGTCGCAGTCCACCAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACAGGCTCTTCAGGTTGCCTTTTGTaGTTTTGTATACAATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PEGSQPWTKVWQLSTTGSSGCLL*FCIQSS Trigger: TGATGATTGTATACAAAAGCACAAAAGGCAACCTGA...AGAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGATGAGATTCATTTGGCATCTACAAAGGCTGCAGTTTGGTGGACTGCGACAGCCTCCATCAGGTTaGCTTTTGTGCTTTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: QEMRFIWHLQRLQFGGLRQPPSG*LLCFCI Trigger: TATACAAAAGCACAAAAGGCAACCTGATGGAGGCTG...TCGCAGTCCACCAAACTGCAGCCTTTGTAGATGCCAAATGAATCTCATCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCTTTTGTTTCCTTTTGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTGTCAGGTTGCCTTTTGTaGCTAGGTAGAGCTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ICFCFLLETKQFHFRAGLSGCLL*LGRAEL Trigger: TAGCTCAGCTCTACCTAGGCACAAAAGGCAACCTGA...CAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAAGCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026578.14 ENSMUST00000133012.8 |
||
| 3UTR CAA 72 bp | CCACCATACCTGGAATACATTTGCTTTTGTTTCCTTTaGGAAACCAAGCAGTTTCATTTCAGGGCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPYLEYICFCFL*ETKQFHFRAGL Trigger: CAGGCCAGCCCTGAAATGAAACTGCTTGGTTTCCAAAAGGAAACAAAAGCAAATGTATTCCAGGTATGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGATGAGATTCATTTGGCATCTACAAAGGCTGCAGTTTGGTGGACTGCGATCAGGTTGCCTTTTGTaGTTTTGTATACAATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QEMRFIWHLQRLQFGGLRSGCLL*FCIQSS Trigger: TGATGATTGTATACAAAAGCACAAAAGGCAACCTGA...TCGCAGTCCACCAAACTGCAGCCTTTGTAGATGCCAAATGAATCTCATCTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145184.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCAAGGAACCTGCTGAGGGCTAAGGAGCAGTGCTGTGCAGGTTACCCTGCTAGCAATGACCACCACTaGCAGGCCAGCCTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPRNLLRAKEQCCAGYPASNDHH*QASLQP Trigger: GGGCTGGAGGCTGGCCTGCAAGTGGTGGTCATTGCT...AGCAGGGTAACCTGCACAGCACTGCTCCTTAGCCCTCAGCAGGTTCCTTGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS TCA 90 bp | CTTGCAGGCCAGCCTCCAGCCCATGCAGCACCAGGAGAACGGTGCTaGGGACCGAGTCCATCCACAGTACCAAGGTCTGCCAGAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAGQPPAHAAPGERC*GPSPSTVPRSARVG Trigger: TCCTACTCTGGCAGACCTTGGTACTGTGGATGGACTCGGTCCTCAGCACCGTTCTCCTGGTGCTGCATGGGCTGGAGGCTGGCCTGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000132061.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGGGGATCATGGTGGTCCCGCTATAGTCAGCACCCCAGCCACAAGACCTAGCAATGACCACCACTaGCAGGCCAGCCTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSGDHGGPAIVSTPATRPSNDHH*QASLQP Trigger: GGGCTGGAGGCTGGCCTGCAAGTGGTGGTCATTGCT...AGGTCTTGTGGCTGGGGTGCTGACTATAGCGGGACCACCATGATCCCCAGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS TCA 90 bp | TCTGCCAGAGTAGGAAGTGAACAGAAAGGAGGCCACCGACTGCTGTaGATGCCAGGCTGGCAGCCAGTGGCACTTCAGCCTCCATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SARVGSEQKGGHRLL*MPGWQPVALQPPSG Trigger: ACCTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCCTGGCATTCACAGCAGTCGGTGGCCTCCTTTCTGTTCACTTCCTACTCTGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000132061.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS TCA 90 bp | AGGACCGAGTCCATCCACAGTACCAAGGTCTGCCAGAGTAGGAAGTaGACAGAAAGGAGGCCACCGACTGCTGTGAATGCCAGGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTESIHSTKVCQSRK*TERRPPTAVNARLA Trigger: TGCCAGCCTGGCATTCACAGCAGTCGGTGGCCTCCTTTCTGTTCACTTCCTACTCTGGCAGACCTTGGTACTGTGGATGGACTCGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000132061.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR CAA 90 bp | GTCCATGATGGTCATCTTCAAGCTTCCAAGTTTGTCCCTCCCTGGCTCTGGTATAGCAATGACCACCACTaGCAGGCCAGCCTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VHDGHLQASKFVPPWLWYSNDHH*QASLQP Trigger: GGGCTGGAGGCTGGCCTGCAAGTGGTGGTCATTGCT...ATACCAGAGCCAGGGAGGGACAAACTTGGAAGCTTGAAGATGACCATCATGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS CCA 90 bp | AGAAAGGAGGCCACCGACTGCTGTGAATGCCAGGCTGGCAGCCAGTaGCACTTCAGCCTCCATCAGGTTGCCTTTTGTGCTTTTGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: RKEATDCCECQAGSQ*HFSLHQVAFCAFVY Trigger: GTATACAAAAGCACAAAAGGCAACCTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCCTGGCATTCACAGCAGTCGGTGGCCTCCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCCATTGACTTCCTGAAAGGCTTTACCTTCTACTGTCTGGGGATCATGGTGAGCAATGACCACCACTaGCAGGCCAGCCTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LAIDFLKGFTFYCLGIMVSNDHH*QASLQP Trigger: GGGCTGGAGGCTGGCCTGCAAGTGGTGGTCATTGCT...CACCATGATCCCCAGACAGTAGAAGGTAAAGCCTTTCAGGAAGTCAATGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTGACTTGCAAATCACTATGTAGACCAGGTAGGCTGGCTTTGAACTCACAAAGCAATGACCACCACTaGCAGGCCAGCCTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WVTCKSLCRPGRLALNSQSNDHH*QASLQP Trigger: GGGCTGGAGGCTGGCCTGCAAGTGGTGGTCATTGCT...TTGTGAGTTCAAAGCCAGCCTACCTGGTCTACATAGTGATTTGCAAGTCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000128906.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGGGATCCCAGCCCTGGACCAAGGTCTGGCAACTAAGTACAACAGGCTCTTCAGCCTCCATCAGGTaGCCTTTTGTGCTTTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PEGSQPWTKVWQLSTTGSSASIR*PFVLLY Trigger: ATACAAAAGCACAAAAGGCAACCTGATGGAGGCTGA...AGAGCCTGTTGTACTTAGTTGCCAGACCTTGGTCCAGGGCTGGGATCCCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
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| CDS TCA 90 bp | CCTCCATCAGGTTGCCTTTTGTGCCTAGGTAGAGCTGAGCTACTTTaGGAATTCCCATCAGAAGCAAGAGAACCAGATCCAGGGCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: PPSGCLLCLGRAELL*EFPSEAREPDPGPD Trigger: GTCTGGCCCTGGATCTGGTTCTCTTGCTTCTGATGGGAATTCTCAAAGTAGCTCAGCTCTACCTAGGCACAAAAGGCAACCTGATGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000132061.2 ENSMUST00000133012.8 |
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| CDS-3UTR CAA 90 bp | AGGGCCAGCGTGGGAAGCACAGAACTCAGTAATCCGTGTGTGAGCAAACACAGGTCAGCCTCCATCAGGTaGCCTTTTGTGCTTTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: RASVGSTELSNPCVSKHRSASIR*PFVLLY Trigger: ATACAAAAGCACAAAAGGCAACCTGATGGAGGCTGA...CCTGTGTTTGCTCACACACGGATTACTGAGTTCTGTGCTTCCCACGCTGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
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| CDS-3UTR CAA 90 bp | GTCTGGCAACTAAGTACAACAGGCTCTCAGAACAAGACCCAGGGCCAGCGTGGGTTGCCTTTTGTGCTTTaGTATACAATCATCAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: VWQLSTTGSQNKTQGQRGLPFVL*YTIIRS Trigger: ACTCCTGATGATTGTATACAAAAGCACAAAAGGCAA...CCCACGCTGGCCCTGGGTCTTGTTCTGAGAGCCTGTTGTACTTAGTTGCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTGCAGGGCTGCCCCTAGCCATTGACTTCCTGAAAGGCTTTACCTTCTACTTGCCTTTTGTGCTTTaGTATACAATCATCAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: GAAGLPLAIDFLKGFTFYLPFVL*YTIIRS Trigger: ACTCCTGATGATTGTATACAAAAGCACAAAAGGCAA...GTAGAAGGTAAAGCCTTTCAGGAAGTCAATGGCTAGGGGCAGCCCTGCAGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
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| CDS GCA 72 bp | GCAATGACCACCACTTGCAGGCCAGCCTCCAGCCCATaGAGCACCAGGAGAACGGTGCTGAGGACCGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: AMTTTCRPASSP*STRRTVLRTES Trigger: GGACTCGGTCCTCAGCACCGTTCTCCTGGTGCTGCATGGGCTGGAGGCTGGCCTGCAAGTGGTGGTCATTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000132061.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| CDS TCA 72 bp | CAGCCTCCAGCCCATGCAGCACCAGGAGAACGGTGCTaGGGACCGAGTCCATCCACAGTACCAAGGTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: QPPAHAAPGERC*GPSPSTVPRSA Trigger: GGCAGACCTTGGTACTGTGGATGGACTCGGTCCTCAGCACCGTTCTCCTGGTGCTGCATGGGCTGGAGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000132061.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| CDS TCA 72 bp | GTAGGAAGTGAACAGAAAGGAGGCCACCGACTGCTGTaGATGCCAGGCTGGCAGCCAGTGGCACTTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VGSEQKGGHRLL*MPGWQPVALQP Trigger: AGGCTGAAGTGCCACTGGCTGCCAGCCTGGCATTCACAGCAGTCGGTGGCCTCCTTTCTGTTCACTTCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000132061.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| CDS GCA 72 bp | GAAGTGAACAGAAAGGAGGCCACCGACTGCTGTGAATaGCAGGCTGGCAGCCAGTGGCACTTCAGCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: EVNRKEATDCCE*QAGSQWHFSLH Trigger: ATGGAGGCTGAAGTGCCACTGGCTGCCAGCCTGGCATTCACAGCAGTCGGTGGCCTCCTTTCTGTTCACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000132061.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| CDS TCA 72 bp | TCCATCCACAGTACCAAGGTCTGCCAGAGTAGGAAGTaGACAGAAAGGAGGCCACCGACTGCTGTGAATGCC | + |
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Preference number: 6 (lower is better) Translates to: SIHSTKVCQSRK*TERRPPTAVNA Trigger: GGCATTCACAGCAGTCGGTGGCCTCCTTTCTGTTCACTTCCTACTCTGGCAGACCTTGGTACTGTGGATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000128906.2 ENSMUST00000132061.2 ENSMUST00000133012.8 ENSMUST00000145184.8 |
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| CDS CAA 90 bp | GTGAATGCCAGGCTGGCAGCCAGTGGCACTTCAGCCTCCATCAGGTaGCCTTTTGTGCTTTTGTATACAATCATCAGGAGTGTAGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: VNARLAASGTSASIR*PFVLLYTIIRSVAR Trigger: CCTAGCTACACTCCTGATGATTGTATACAAAAGCACAAAAGGCAACCTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCCTGGCATTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
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| CDS GCA 72 bp | GGCTGGCAGCCAGTGGCACTTCAGCCTCCATCAGGTTaGCTTTTGTGCTTTTGTATACAATCATCAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: GWQPVALQPPSG*LLCFCIQSSGV Trigger: CACTCCTGATGATTGTATACAAAAGCACAAAAGGCAACCTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
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| CDS CAA 90 bp | GCAGCCAGTGGCACTTCAGCCTCCATCAGGTTGCCTTTTGTGCTTTaGTATACAATCATCAGGAGTGTAGCTAGGAAGTACAGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: AASGTSASIRLPFVL*YTIIRSVARKYRAE Trigger: CTCTGCCCTGTACTTCCTAGCTACACTCCTGATGATTGTATACAAAAGCACAAAAGGCAACCTGATGGAGGCTGAAGTGCCACTGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
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| CDS CAA 72 bp | AGGCTGGCAGCCAGTGGCACTTCAGCCTCCATCAGGTaGCCTTTTGTGCTTTTGTATACAATCATCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RLAASGTSASIR*PFVLLYTIIRS Trigger: ACTCCTGATGATTGTATACAAAAGCACAAAAGGCAACCTGATGGAGGCTGAAGTGCCACTGGCTGCCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
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| CDS TCA 72 bp | GGTTGCCTTTTGTGCCTAGGTAGAGCTGAGCTACTTTaGGAATTCCCATCAGAAGCAAGAGAACCAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: GCLLCLGRAELL*EFPSEAREPDP Trigger: TGGATCTGGTTCTCTTGCTTCTGATGGGAATTCTCAAAGTAGCTCAGCTCTACCTAGGCACAAAAGGCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000132061.2 ENSMUST00000133012.8 |
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| CDS CAA 72 bp | GGCACTTCAGCCTCCATCAGGTTGCCTTTTGTGCTTTaGTATACAATCATCAGGAGTGTAGCTAGGAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: GTSASIRLPFVL*YTIIRSVARKY Trigger: GTACTTCCTAGCTACACTCCTGATGATTGTATACAAAAGCACAAAAGGCAACCTGATGGAGGCTGAAGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128906.2 ENSMUST00000145184.8 |
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| CDS TCA 72 bp | GAACCAGATCCAGGGCCAGACAGTTACAAGGATAGCTaGAAACCTGACTTTTGTATACAATCATCAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: EPDPGPDSYKDS*KPDFCIQSSGV Trigger: CACTCCTGATGATTGTATACAAAAGTCAGGTTTTCAGCTATCCTTGTAACTGTCTGGCCCTGGATCTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026578.14 ENSMUST00000126510.8 ENSMUST00000132061.2 ENSMUST00000133012.8 |
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