Pregenerated sensors for TMEM79 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001420Ensembl transcript IDs: ENSMUST00000001456.11, ENSMUST00000107552.2, ENSMUST00000107553.8, ENSMUST00000193872.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGGGCTGTGGCTCTGCACTCCTGACCCACAGGAAGCTAGGGAGTaGGATGACCATCCCGCCATAGCACCTGTGCCATGGTGGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: GGLWLCTPDPQEARE*DDHPAIAPVPWWEA Trigger: AGCTTCCCACCATGGCACAGGTGCTATGGCGGGATGGTCATCTCACTCCCTAGCTTCCTGTGGGTCAGGAGTGCAGAGCCACAGCCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR CCA 90 bp | GACATCAACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTaGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: DINFYPRAKAGFPSP*RSLAQTVQGGLWLC Trigger: GCAGAGCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTTGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR TCA 90 bp | GGGGTGGGGGAGGAGCAGAATGAACGAGCCACAGGAGCCTGGCAGTaGTTTATTACATACTCACAGCTATATGCTGGGCTGAGGGCGCTC | + |
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Preference number: 1 (lower is better) Translates to: GVGEEQNERATGAWQ*FITYSQLYAGLRAL Trigger: GAGCGCCCTCAGCCCAGCATATAGCTGTGAGTATGTAATAAATCACTGCCAGGCTCCTGTGGCTCGTTCATTCTGCTCCTCCCCCACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR CCA 90 bp | TGGGAAGCTGCCCAAGAAGGAAGTGTGCTTCTCCAGTCTCGACCTTaGGCTCTCATCCTCTGGGTTTGTAAAGCAGCGGCTAGGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: WEAAQEGSVLLQSRP*ALILWVCKAAARRE Trigger: CTCTCTCCTAGCCGCTGCTTTACAAACCCAGAGGATGAGAGCCCAAGGTCGAGACTGGAGAAGCACACTTCCTTCTTGGGCAGCTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR TCA 90 bp | ACTAGATCCCATGGAACTGTAACCCACCAGGTGGGTCCAGGGAACTaGACCAGAGTCCTCTGCAAGAGCAGCAAGTACTCTGACTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: TRSHGTVTHQVGPGN*TRVLCKSSKYSDWL Trigger: CAGCCAGTCAGAGTACTTGCTGCTCTTGCAGAGGACTCTGGTTCAGTTCCCTGGACCCACCTGGTGGGTTACAGTTCCATGGGATCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR CCA 90 bp | TCCTCTGGGTTTGTAAAGCAGCGGCTAGGAGAGAGTAAGGGTATTTaGGGCCCCAGTGGGGAAGTAGCAAGGTTCCTCGCATCAAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: SSGFVKQRLGESKGI*GPSGEVARFLASKV Trigger: GACCTTTGATGCGAGGAACCTTGCTACTTCCCCACTGGGGCCCCAAATACCCTTACTCTCTCCTAGCCGCTGCTTTACAAACCCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR TCA 90 bp | TCCAGGGAACTGAACCAGAGTCCTCTGCAAGAGCAGCAAGTACTCTaGCTGGCTGAGCCAGCTCTCCAGCCTAGATCCAATCTCTTAATG | + |
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Preference number: 1 (lower is better) Translates to: SRELNQSPLQEQQVL*LAEPALQPRSNLLM Trigger: CATTAAGAGATTGGATCTAGGCTGGAGAGCTGGCTCAGCCAGTCAGAGTACTTGCTGCTCTTGCAGAGGACTCTGGTTCAGTTCCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR CCA 90 bp | GCTGGTTTGGGACGGTTTCAACAAACAGGAAGACAGAGAGAGGCTTaGAAGGCAGTTAGTTTCTCTTTGAGGGCCCGATTCTCCCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: AGLGRFQQTGRQREA*KAVSFSLRARFSPV Trigger: GACTGGGGAGAATCGGGCCCTCAAAGAGAAACTAACTGCCTTCCAAGCCTCTCTCTGTCTTCCTGTTTGTTGAAACCGTCCCAAACCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR GCA 90 bp | GCTGAGCCAGCTCTCCAGCCTAGATCCAATCTCTTAATGTGTGAGTaGTGTTGGGCTGGTTTGGGACGGTTTCAACAAACAGGAAGACAG | + |
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Preference number: 1 (lower is better) Translates to: AEPALQPRSNLLMCE*CWAGLGRFQQTGRQ Trigger: CTGTCTTCCTGTTTGTTGAAACCGTCCCAAACCAGCCCAACAGCACTCACACATTAAGAGATTGGATCTAGGCTGGAGAGCTGGCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR CCA 90 bp | CCAGCTCTCCAGCCTAGATCCAATCTCTTAATGTGTGAGTGCTGTTaGGCTGGTTTGGGACGGTTTCAACAAACAGGAAGACAGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: PALQPRSNLLMCECC*AGLGRFQQTGRQRE Trigger: CTCTCTCTGTCTTCCTGTTTGTTGAAACCGTCCCAAACCAGCCCAACAGCACTCACACATTAAGAGATTGGATCTAGGCTGGAGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR-3UTR CCA 90 bp | GGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCTCTGCACTCCTGACCATAGCACCTGTGCCATaGTGGGAAGCTGCCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GAHWHRQFRVGCGSALLTIAPVP*WEAAQE Trigger: TTCTTGGGCAGCTTCCCACCATGGCACAGGTGCTAT...GGTCAGGAGTGCAGAGCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCGCATCAAAGGTCCATTaGCTGGGCAAAGGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VFLLLGAHWHRQFRVGCGASKVH*LGKGQA Trigger: GGCCTGGCCTTTGCCCAGGCAATGGACCTTTGATGC...GCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCTCTGCACTCCTGGAGAGTAAGGGTATTTaGGGCCCCAGTGGGGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LGAHWHRQFRVGCGSALLESKGI*GPSGEV Trigger: TACTTCCCCACTGGGGCCCCAAATACCCTTACTCTC...CAGGAGTGCAGAGCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCTCTGCACTCCTGACCCACGAGAGTAAGGGTATTTaGGGCCCCAGTGGGGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: AHWHRQFRVGCGSALLTHESKGI*GPSGEV Trigger: TACTTCCCCACTGGGGCCCCAAATACCCTTACTCTC...GTGGGTCAGGAGTGCAGAGCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCGCCATGGTGGGAAGCTaGCCAAGAAGGAAGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VFLLLGAHWHRQFRVGCGAMVGS*PRRKCA Trigger: AGCACACTTCCTTCTTGGGCAGCTTCCCACCATGGC...GCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR GCA 90 bp | AACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCAGGTGGGCTGTGGCTCTaGACTCCTGACCCACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: NFYPRAKAGFPSPWRSLAGGLWL*TPDPQE Trigger: TTCCTGTGGGTCAGGAGTGCAGAGCCACAGCCCACC...TGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGGGTGGGCTGTGGCTCTaGACTCCTGACCCACAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: STSTLGLRQVFLLLGAHWGGLWL*TPDPQE Trigger: TTCCTGTGGGTCAGGAGTGCAGAGCCACAGCCCACC...CCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | TCAACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGGTTCAGGGTGGGCTGTaGCTCTGCACTCCTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: STSTLGLRQVFLLLGAHWVQGGL*LCTPDP Trigger: TGGGTCAGGAGTGCAGAGCCACAGCCCACCCTGAAC...CCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | AACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCACAAAGGTCCATTGCCTaGGCAAAGGCCAGGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: NFYPRAKAGFPSPWRSLAQRSIA*AKARPT Trigger: TGTAGGCCTGGCCTTTGCCCAGGCAATGGACCTTTG...TGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATAGCACCTGTGCCATGGTGGGAAGCTGCCCAAGAAGGAAGTGTGCTTCTCTGGGCTCTCATCCTCTaGGTTTGTAAAGCAGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: AIAPVPWWEAAQEGSVLLWALIL*VCKAAA Trigger: AGCCGCTGCTTTACAAACCCAGAGGATGAGAGCCCA...GAGAAGCACACTTCCTTCTTGGGCAGCTTCCCACCATGGCACAGGTGCTATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAGCTCTGTGCCCCGCCCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTGCACCTGTGCCATGGTaGGAAGCTGCCCAAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: FSSVPRPLRVGLLGSLNSAPVPW*EAAQEG Trigger: TCCTTCTTGGGCAGCTTCCCACCATGGCACAGGTGC...ACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGGGCGGGGCACAGAGCTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCCCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTGGAATGTTACAGACAGACAGTTCAGGGTaGGCTGTGGCTCTGCACTCC | + |
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Preference number: 2 (lower is better) Translates to: PRPLRVGLLGSLNSGMLQTDSSG*AVALHS Trigger: GGAGTGCAGAGCCACAGCCCACCCTGAACTGTCTGT...CTGTAACATTCCACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGGGCGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTGGGATGGGGGAGGGCACTAGATCCCATGGAACTGTAACCCACCAGGTGATGTGTGAGTGCTGTTaGGCTGGTTTGGGACGGTTT | + |
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Preference number: 2 (lower is better) Translates to: QCGMGEGTRSHGTVTHQVMCECC*AGLGRF Trigger: AAACCGTCCCAAACCAGCCCAACAGCACTCACACAT...CACCTGGTGGGTTACAGTTCCATGGGATCTAGTGCCCTCCCCCATCCCACACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCCCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTGGAATGTTACAGCTCCAGTCTCGACCTTaGGCTCTCATCCTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PRPLRVGLLGSLNSGMLQLQSRP*ALILWV Trigger: AACCCAGAGGATGAGAGCCCAAGGTCGAGACTGGAG...CTGTAACATTCCACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGGGCGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTGGAATGTTACAGAGACCCGCACCTGTGCCATGGTaGGAAGCTGCCCAAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: PLRVGLLGSLNSGMLQRPAPVPW*EAAQEG Trigger: TCCTTCTTGGGCAGCTTCCCACCATGGCACAGGTGC...GGGTCTCTGTAACATTCCACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCAGCAAGTACTCTGACTGGCTGAGCCAGCTCTCCAGCCTAGATCCAATCGAGACCCGTGTAGGTTaGGACAGGAAAGACAACAGC | + |
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Preference number: 2 (lower is better) Translates to: KSSKYSDWLSQLSSLDPIETRVG*DRKDNS Trigger: GCTGTTGTCTTTCCTGTCCCAACCTACACGGGTCTC...GATTGGATCTAGGCTGGAGAGCTGGCTCAGCCAGTCAGAGTACTTGCTGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR-3UTR GCA 90 bp | CTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGCAGGTTGCATCAAAGGTCCATTaGCTGGGCAAAGGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LHQLSDMTSTSTLGLRQVASKVH*LGKGQA Trigger: GGCCTGGCCTTTGCCCAGGCAATGGACCTTTGATGC...AACCTGCCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGTTTGTATGGATGTGCAGTGTGGGATGGGGGAGGGCACTAGATCCCATGATAGCACCTGTGCCATaGTGGGAAGCTGCCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LLFVWMCSVGWGRALDPMIAPVP*WEAAQE Trigger: TTCTTGGGCAGCTTCCCACCATGGCACAGGTGCTAT...CATGGGATCTAGTGCCCTCCCCCATCCCACACTGCACATCCATACAAACAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR-3UTR CCA 90 bp | TTAATGTGTGAGTGCTGTTGGGCTGGTTTGGGACGGTTTCAACAAACAGGAAGAGTTCAGGGTGGGCTGTaGCTCTGCACTCCTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: LMCECCWAGLGRFQQTGRVQGGL*LCTPDP Trigger: TGGGTCAGGAGTGCAGAGCCACAGCCCACCCTGAAC...TCTTCCTGTTTGTTGAAACCGTCCCAAACCAGCCCAACAGCACTCACACATTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR-3UTR CCA 90 bp | CTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGCAGGTTCAAAGGTCCATTGCCTaGGCAAAGGCCAGGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: LHQLSDMTSTSTLGLRQVQRSIA*AKARPT Trigger: TGTAGGCCTGGCCTTTGCCCAGGCAATGGACCTTTG...AACCTGCCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | TTAATGTGTGAGTGCTGTTGGGCTGGTTTGGGACGGTTTCAACAAACAGGAAGACTCCAGTCTCGACCTTaGGCTCTCATCCTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: LMCECCWAGLGRFQQTGRLQSRP*ALILWV Trigger: AACCCAGAGGATGAGAGCCCAAGGTCGAGACTGGAG...TCTTCCTGTTTGTTGAAACCGTCCCAAACCAGCCCAACAGCACTCACACATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTCTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGCTCCAGTCTCGACCTTaGGCTCTCATCCTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KGLHQLSDMTSTSTLGLRLQSRP*ALILWV Trigger: AACCCAGAGGATGAGAGCCCAAGGTCGAGACTGGAG...CCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAGACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTCTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGGGTTTTCCTTCTCCTTaGCGCTCACTGGCACAGACA | + |
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Preference number: 2 (lower is better) Translates to: KGLHQLSDMTSTSTLGLRGFPSP*RSLAQT Trigger: TGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAACC...CCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAGACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCTCTGCACTCCTGACCCACTCTCCAGTCTCGACCTaGGGCTCTCATCCTCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: AHWHRQFRVGCGSALLTHSPVST*GSHPLG Trigger: ACCCAGAGGATGAGAGCCCAAGGTCGAGACTGGAGA...GTGGGTCAGGAGTGCAGAGCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR TCA 72 bp | TGGCTCTGCACTCCTGACCCACAGGAAGCTAGGGAGTaGGATGACCATCCCGCCATAGCACCTGTGCCATGG | + |
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Preference number: 3 (lower is better) Translates to: WLCTPDPQEARE*DDHPAIAPVPW Trigger: CCATGGCACAGGTGCTATGGCGGGATGGTCATCTCACTCCCTAGCTTCCTGTGGGTCAGGAGTGCAGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR GCA 72 bp | CCATCCCGCCATAGCACCTGTGCCATGGTGGGAAGCTaGCCAAGAAGGAAGTGTGCTTCTCCAGTCTCGACC | + |
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Preference number: 3 (lower is better) Translates to: PSRHSTCAMVGS*PRRKCASPVST Trigger: GGTCGAGACTGGAGAAGCACACTTCCTTCTTGGGCAGCTTCCCACCATGGCACAGGTGCTATGGCGGGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR CCA 72 bp | TTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTaGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: FYPRAKAGFPSP*RSLAQTVQGGL Trigger: CAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR GCA 72 bp | GGGGAAGTAGCAAGGTTCCTCGCATCAAAGGTCCATTaGCTGGGCAAAGGCCAGGCCTACAACTGTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GEVARFLASKVH*LGKGQAYNCSR Trigger: CCTGGAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAATGGACCTTTGATGCGAGGAACCTTGCTACTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR GCA 72 bp | CTGTGCCATGGTGGGAAGCTGCCCAAGAAGGAAGTGTaGTTCTCCAGTCTCGACCTTGGGCTCTCATCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LCHGGKLPKKEV*FSSLDLGLSSS Trigger: AGAGGATGAGAGCCCAAGGTCGAGACTGGAGAAGCACACTTCCTTCTTGGGCAGCTTCCCACCATGGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR CCA 72 bp | GCCCAAGAAGGAAGTGTGCTTCTCCAGTCTCGACCTTaGGCTCTCATCCTCTGGGTTTGTAAAGCAGCGGCT | + |
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Preference number: 3 (lower is better) Translates to: AQEGSVLLQSRP*ALILWVCKAAA Trigger: AGCCGCTGCTTTACAAACCCAGAGGATGAGAGCCCAAGGTCGAGACTGGAGAAGCACACTTCCTTCTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR-3UTR CAA 90 bp | TTTAGCTCTGTGCCCCGCCCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTAGGTTTTCCTTCTCCTaGGCGCTCACTGGCACAGAC | + |
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Preference number: 3 (lower is better) Translates to: FSSVPRPLRVGLLGSLNSRFSFS*ALTGTD Trigger: GTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAACCT...ACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGGGCGGGGCACAGAGCTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR TCA 72 bp | CATGGAACTGTAACCCACCAGGTGGGTCCAGGGAACTaGACCAGAGTCCTCTGCAAGAGCAGCAAGTACTCT | + |
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Preference number: 3 (lower is better) Translates to: HGTVTHQVGPGN*TRVLCKSSKYS Trigger: AGAGTACTTGCTGCTCTTGCAGAGGACTCTGGTTCAGTTCCCTGGACCCACCTGGTGGGTTACAGTTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| 3UTR GCA 72 bp | ACATACTCACAGCTATATGCTGGGCTGAGGGCGCTCTaGCTTCCTAGCCACCATGTGAGTTCACACCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: TYSQLYAGLRAL*LPSHHVSSHPV Trigger: AACTGGGTGTGAACTCACATGGTGGCTAGGAAGGCAGAGCGCCCTCAGCCCAGCATATAGCTGTGAGTATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| 3UTR CCA 72 bp | TTTGTAAAGCAGCGGCTAGGAGAGAGTAAGGGTATTTaGGGCCCCAGTGGGGAAGTAGCAAGGTTCCTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: FVKQRLGESKGI*GPSGEVARFLA Trigger: TGCGAGGAACCTTGCTACTTCCCCACTGGGGCCCCAAATACCCTTACTCTCTCCTAGCCGCTGCTTTACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTGGAATGTTACAGAGACCCTCTCCAGTCTCGACCTaGGGCTCTCATCCTCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLRVGLLGSLNSGMLQRPSPVST*GSHPLG Trigger: ACCCAGAGGATGAGAGCCCAAGGTCGAGACTGGAGA...GGGTCTCTGTAACATTCCACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAATGTGTGAGTGCTGTTGGGCTGGTTTGGGACGGTTTCAACAAACAGGAAGAATGCTAGGAGGTAACTaGTGCCTGAGGGTGGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LMCECCWAGLGRFQQTGRMLGGN*CLRVGV Trigger: CACCCCCACCCTCAGGCACAAGTTACCTCCTAGCAT...TCTTCCTGTTTGTTGAAACCGTCCCAAACCAGCCCAACAGCACTCACACATTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| 3UTR TCA 72 bp | GAGGAGCAGAATGAACGAGCCACAGGAGCCTGGCAGTaGTTTATTACATACTCACAGCTATATGCTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EEQNERATGAWQ*FITYSQLYAGL Trigger: CAGCCCAGCATATAGCTGTGAGTATGTAATAAATCACTGCCAGGCTCCTGTGGCTCGTTCATTCTGCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| 3UTR GCA 72 bp | GCTCTCCAGCCTAGATCCAATCTCTTAATGTGTGAGTaGTGTTGGGCTGGTTTGGGACGGTTTCAACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: ALQPRSNLLMCE*CWAGLGRFQQT Trigger: TGTTTGTTGAAACCGTCCCAAACCAGCCCAACAGCACTCACACATTAAGAGATTGGATCTAGGCTGGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTGTTTGTATGGATGTGCAGTGTGGGATGGGGGAGGGCACTAGATCCCATGCTACATATAACAGTCTaGACTGAGGCAAAAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLFVWMCSVGWGRALDPMLHITV*TEAKES Trigger: AGACTCTTTTGCCTCAGTCAAGACTGTTATATGTAG...CATGGGATCTAGTGCCCTCCCCCATCCCACACTGCACATCCATACAAACAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| 3UTR CCA 72 bp | CAGCCTAGATCCAATCTCTTAATGTGTGAGTGCTGTTaGGCTGGTTTGGGACGGTTTCAACAAACAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QPRSNLLMCECC*AGLGRFQQTGR Trigger: TCTTCCTGTTTGTTGAAACCGTCCCAAACCAGCCCAACAGCACTCACACATTAAGAGATTGGATCTAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| 3UTR GCA 72 bp | TATTATGTATTTGTGAGTCTTTTGTTTGTATGGATGTaGAGTGTGGGATGGGGGAGGGCACTAGATCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: YYVFVSLLFVWM*SVGWGRALDPM Trigger: CATGGGATCTAGTGCCCTCCCCCATCCCACACTGCACATCCATACAAACAAAAGACTCACAAATACATAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| CDS-3UTR GCA 90 bp | GGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCTGTGCCGGCCTCAGCCCACTTaGGCTCTGGGGGCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQRPGLQLFQGSAESPLCRPQPT*ALGAQG Trigger: ACCCTGAGCCCCCAGAGCGCAAGTGGGCTGAGGCCG...GCACAGGGGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCTCTGCACTCCTGCCAAGCGGGAGCTCATaGTGGGCAGCCTCGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGAHWHRQFRVGCGSALLPSGSS*WAASGH Trigger: ATGCCCCGAGGCTGCCCACCATGAGCTCCCGCTTGG...CAGGAGTGCAGAGCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCTGTGCCTGAAGACCCCACTCTaGGCGACTCAGTTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQRPGLQLFQGSAESPLCLKTPL*ATQFQG Trigger: CCCCTGGAACTGAGTCGCTCAGAGTGGGGTCTTCAG...GCACAGGGGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCTGTGCCTGGCAGGAAATTCCTaGGCTCGCCTGGTCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GQRPGLQLFQGSAESPLCLAGNS*ARLVQR Trigger: ACGCTGGACCAGGCGAGCTCAGGAATTTCCTGCCAG...GCACAGGGGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCTGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCTCTGGGGGCTCAGGGTaGCTGAGTCGAGCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IAWAKARPTTVPGKCRKPSGGSG*LSRAGR Trigger: CCTGCCAGCTCGACTCAGCCACCCTGAGCCCCCAGA...GGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCAGCCCACTTGCGCTCTaGGGGCTCAGGGTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLLGAHWHRQFRVGCGSPLAL*GLRVAE Trigger: CTCAGCCACCCTGAGCCCCCAGAGCGCAAGTGGGCT...GCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCTGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCAAGCGGGAGCTCATaGTGGGCAGCCTCGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IAWAKARPTTVPGKCRKPPSGSS*WAASGH Trigger: ATGCCCCGAGGCTGCCCACCATGAGCTCCCGCTTGG...GGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGGCTCTGCACTCCTGACCCACAGGAAGCTAGGGAGTGAGATGACCATCCGTCGCGATGCAGGATaGGCTCCTCCTGTGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCGSALLTHRKLGSEMTIRRDAG*APPVAS Trigger: GGAAGCCACAGGAGGAGCGCATCCTGCATCGCGACG...GATGGTCATCTCACTCCCTAGCTTCCTGTGGGTCAGGAGTGCAGAGCCACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCGGCCTCAGCCCACTTaGGCTCTGGGGGCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: STSTLGLRQVFLLLGAHWRPQPT*ALGAQG Trigger: ACCCTGAGCCCCCAGAGCGCAAGTGGGCTGAGGCCG...CCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCTGTGGGCGACAGCTCTCAGTaGCTCACGACCTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WAKARPTTVPGKCRKPPVGDSSQ*LTTSTA Trigger: AGCTGTGGAGGTCGTGAGGCACTGAGAGCTGTCGCC...CACAGGGGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCTGTGGATGCGCTCCTCCTGTaGCTTCCGCTCGATGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WAKARPTTVPGKCRKPPVDALLL*LPLDAL Trigger: CAGTGCATCGAGCGGAAGCCACAGGAGGAGCGCATC...CACAGGGGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | GCCATAGCACCTGTGCCATGGTGGGAAGCTGCCCAAGAAGGAAGTGTGCTTCTCTCTGGGGGCTCAGGGTaGCTGAGTCGAGCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIAPVPWWEAAQEGSVLLSGGSG*LSRAGR Trigger: CCTGCCAGCTCGACTCAGCCACCCTGAGCCCCCAGA...GAGAAGCACACTTCCTTCTTGGGCAGCTTCCCACCATGGCACAGGTGCTATGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTTGTAAAGCAGCGGCTAGGAGAGAGTAAGGGTATTTGGGGCCCCAGTGGGAGCCCACTTGCGCTCTaGGGGCTCAGGGTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFVKQRLGESKGIWGPSGSPLAL*GLRVAE Trigger: CTCAGCCACCCTGAGCCCCCAGAGCGCAAGTGGGCT...CCCACTGGGGCCCCAAATACCCTTACTCTCTCCTAGCCGCTGCTTTACAAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCCTGAAGACCCCACTCTaGGCGACTCAGTTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLLGAHWHRQFRVGCGLKTPL*ATQFQG Trigger: CCCCTGGAACTGAGTCGCTCAGAGTGGGGTCTTCAG...GCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR TCA 90 bp | TCCCGCCATAGCACCTGTGCCATGGTGGGAAGCTGCCCAAGAAGGAAGTGTGCTCTGAAGACCCCACTCTaGGCGACTCAGTTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRHSTCAMVGSCPRRKCALKTPL*ATQFQG Trigger: CCCCTGGAACTGAGTCGCTCAGAGTGGGGTCTTCAG...AGCACACTTCCTTCTTGGGCAGCTTCCCACCATGGCACAGGTGCTATGGCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGGCTCTGCACTCCTGACCCACAGGAAGCTAGGGAGTGAGATGACCATCCTGGCAGGAAATTCCTaGGCTCGCCTGGTCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GCGSALLTHRKLGSEMTILAGNS*ARLVQR Trigger: ACGCTGGACCAGGCGAGCTCAGGAATTTCCTGCCAG...GATGGTCATCTCACTCCCTAGCTTCCTGTGGGTCAGGAGTGCAGAGCCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCGTCGCGATGCAGGATaGGCTCCTCCTGTGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAGFPSPWRSLAQTVQGGRRDAG*APPVAS Trigger: GGAAGCCACAGGAGGAGCGCATCCTGCATCGCGACG...CCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | ATTGCCTGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCGGCGACAGCTCTCAGTaGCTCACGACCTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IAWAKARPTTVPGKCRKPGDSSQ*LTTSTA Trigger: AGCTGTGGAGGTCGTGAGGCACTGAGAGCTGTCGCC...GGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGGATGGGGGAGGGCACTAGATCCCATGGAACTGTAACCCACCAGGTGGACTGGGCCACGTACTaGCGGTGGATCTCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCGMGEGTRSHGTVTHQVDWATY*RWISTS Trigger: GGAAGTGGAGATCCACCGGCAGTACGTGGCCCAGTC...CACCTGGTGGGTTACAGTTCCATGGGATCTAGTGCCCTCCCCCATCCCACACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| CDS-3UTR GCA 90 bp | ATTGCCTGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCGACTGGGCCACGTACTaGCGGTGGATCTCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IAWAKARPTTVPGKCRKPDWATY*RWISTS Trigger: GGAAGTGGAGATCCACCGGCAGTACGTGGCCCAGTC...GGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | GGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCTCTGCACTCCTGACCACTTATTGTGCTGTCTaGACCATCCTCAGGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GAHWHRQFRVGCGSALLTTYCAV*TILRPL Trigger: GAGGGGCCTGAGGATGGTCCAGACAGCACAATAAGT...GGTCAGGAGTGCAGAGCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGGATGGGGGAGGGCACTAGATCCCATGGAACTGTAACCCACCAGGTGGATGCGCTCCTCCTGTaGCTTCCGCTCGATGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QCGMGEGTRSHGTVTHQVDALLL*LPLDAL Trigger: CAGTGCATCGAGCGGAAGCCACAGGAGGAGCGCATC...CACCTGGTGGGTTACAGTTCCATGGGATCTAGTGCCCTCCCCCATCCCACACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| CDS-3UTR CCA 90 bp | AACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCACCAAGCGGGAGCTCATaGTGGGCAGCCTCGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NFYPRAKAGFPSPWRSLAPSGSS*WAASGH Trigger: ATGCCCCGAGGCTGCCCACCATGAGCTCCCGCTTGG...TGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCTGTGGGAGCCCGAGTACGATaGGAAAGGTGGCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: WAKARPTTVPGKCRKPPVGARVR*ERWQRP Trigger: GGGTCTTTGCCACCTTTCCCATCGTACTCGGGCTCC...CACAGGGGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCTCTGCACTCCTGGGTTCCACACCAGCATaGCCAAGAGTGGCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGAHWHRQFRVGCGSALLGSTPA*PRVAGK Trigger: CTTTCCTGCCACTCTTGGCCATGCTGGTGTGGAACC...CAGGAGTGCAGAGCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| 3UTR CAA 72 bp | GAGGGCCCGATTCTCCCCAGTCCTCCTTTGTACCCCTaGATGCTAGGAGGTAACTTGTGCCTGAGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGPILPSPPLYP*MLGGNLCLRVG Trigger: CCCCACCCTCAGGCACAAGTTACCTCCTAGCATCAAGGGGTACAAAGGAGGACTGGGGAGAATCGGGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| CDS-3UTR GCA 90 bp | CTTTTGTTTGTATGGATGTGCAGTGTGGGATGGGGGAGGGCACTAGATCCCATGCGGCCTCAGCCCACTTaGGCTCTGGGGGCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFVWMCSVGWGRALDPMRPQPT*ALGAQG Trigger: ACCCTGAGCCCCCAGAGCGCAAGTGGGCTGAGGCCG...CATGGGATCTAGTGCCCTCCCCCATCCCACACTGCACATCCATACAAACAAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
||
| CDS-3UTR GCA 90 bp | GTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCAGGCAGGAAGGCGTATaGTCCGTACAGCAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLLGAHWHRQFRVGCGRQEGV*SVQQTG Trigger: CCCTGTCTGCTGTACGGAGCATACGCCTTCCTGCCT...GCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | TCCCGCCATAGCACCTGTGCCATGGTGGGAAGCTGCCCAAGAAGGAAGTGTGCTGGAGCCCGAGTACGATaGGAAAGGTGGCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SRHSTCAMVGSCPRRKCAGARVR*ERWQRP Trigger: GGGTCTTTGCCACCTTTCCCATCGTACTCGGGCTCC...AGCACACTTCCTTCTTGGGCAGCTTCCCACCATGGCACAGGTGCTATGGCGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | GCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCTCTGCACTCCTGACCCACCAGCATGGCCAAGAGTaGCAGGAAAGTCAGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: AHWHRQFRVGCGSALLTHQHGQE*QESQAI Trigger: TATGGCCTGACTTTCCTGCCACTCTTGGCCATGCTG...GTGGGTCAGGAGTGCAGAGCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTCGCATCAAAGGTCCATTGCCTGGGCAAAGGCCAGGCCTACAACTGTTCGATGCGCTCCTCCTGTaGCTTCCGCTCGATGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VPRIKGPLPGQRPGLQLFDALLL*LPLDAL Trigger: CAGTGCATCGAGCGGAAGCCACAGGAGGAGCGCATC...GAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAATGGACCTTTGATGCGAGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCTGTGCAGCATGGCCAAGAGTaGCAGGAAAGTCAGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: WAKARPTTVPGKCRKPPVQHGQE*QESQAI Trigger: TATGGCCTGACTTTCCTGCCACTCTTGGCCATGCTG...CACAGGGGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | ATTGCCTGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCTTCTTCCTCTGACTaGAGGACTAAAGCCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IAWAKARPTTVPGKCRKPPSSSD*RTKACG Trigger: ACCGCAGGCTTTAGTCCTGCAGTCAGAGGAAGAAGG...GGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | AACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCAAGGCAGGAAGGCGTATaGTCCGTACAGCAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NFYPRAKAGFPSPWRSLARQEGV*SVQQTG Trigger: CCCTGTCTGCTGTACGGAGCATACGCCTTCCTGCCT...TGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | CCCCGCCCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTGGAATGTTACAGGACTGGGCCACGTACTaGCGGTGGATCTCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRPLRVGLLGSLNSGMLQDWATY*RWISTS Trigger: GGAAGTGGAGATCCACCGGCAGTACGTGGCCCAGTC...CTGTAACATTCCACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGGGCGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | CATTGCCTGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCACTTATTGTGCTGTCTaGACCATCCTCAGGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCLGKGQAYNCSREVPKATYCAV*TILRPL Trigger: GAGGGGCCTGAGGATGGTCCAGACAGCACAATAAGT...GGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTGGAATGTTACAGAGACCCAGCCCACTTGCGCTCTaGGGGCTCAGGGTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLRVGLLGSLNSGMLQRPSPLAL*GLRVAE Trigger: CTCAGCCACCCTGAGCCCCCAGAGCGCAAGTGGGCT...GGGTCTCTGTAACATTCCACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CCA 90 bp | CATTGCCTGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCGTACGATGGGAAAGGTaGCAAAGACCCCACAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCLGKGQAYNCSREVPKAVRWER*QRPHSE Trigger: TTCGCTGTGGGGTCTTTGCCACCTTTCCCATCGTAC...GGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTGGAATGTTACAGAGACCCCGTCGCGATGCAGGATaGGCTCCTCCTGTGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLRVGLLGSLNSGMLQRPRRDAG*APPVAS Trigger: GGAAGCCACAGGAGGAGCGCATCCTGCATCGCGACG...GGGTCTCTGTAACATTCCACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | GCCATAGCACCTGTGCCATGGTGGGAAGCTGCCCAAGAAGGAAGTGTGCTTCTCACTTATTGTGCTGTCTaGACCATCCTCAGGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AIAPVPWWEAAQEGSVLLTYCAV*TILRPL Trigger: GAGGGGCCTGAGGATGGTCCAGACAGCACAATAAGT...GAGAAGCACACTTCCTTCTTGGGCAGCTTCCCACCATGGCACAGGTGCTATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CCA 90 bp | AACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCAGTGGCTGAGTCGAGCTaGCAGGAAATTCCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NFYPRAKAGFPSPWRSLAVAESS*QEIPEL Trigger: GAGCTCAGGAATTTCCTGCCAGCTCGACTCAGCCAC...TGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCTCTGGGGGCTCAGGGTaGCTGAGTCGAGCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSDMTSTSTLGLRQVFLLSGGSG*LSRAGR Trigger: CCTGCCAGCTCGACTCAGCCACCCTGAGCCCCCAGA...GAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGCTGCCCAAGAAGGAAGTGTGCTTCTCCAGTCTCGACCTTGGGCTCTCGTACGATGGGAAAGGTaGCAAAGACCCCACAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: WEAAQEGSVLLQSRPWALVRWER*QRPHSE Trigger: TTCGCTGTGGGGTCTTTGCCACCTTTCCCATCGTAC...GAGAGCCCAAGGTCGAGACTGGAGAAGCACACTTCCTTCTTGGGCAGCTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCAGCATGGCCAAGAGTaGCAGGAAAGTCAGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KAGFPSPWRSLAQTVQGGQHGQE*QESQAI Trigger: TATGGCCTGACTTTCCTGCCACTCTTGGCCATGCTG...CCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | AACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCACCTTCTTCCTCTGACTaGAGGACTAAAGCCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NFYPRAKAGFPSPWRSLAPSSSD*RTKACG Trigger: ACCGCAGGCTTTAGTCCTGCAGTCAGAGGAAGAAGG...TGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | GCCATAGCACCTGTGCCATGGTGGGAAGCTGCCCAAGAAGGAAGTGTGCTTCTCCAGCCTCACTTATTGTaGTGTCTGGACCATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIAPVPWWEAAQEGSVLLQPHLL*CLDHPQ Trigger: CTGAGGATGGTCCAGACAGCACAATAAGTGAGGCTG...GAGAAGCACACTTCCTTCTTGGGCAGCTTCCCACCATGGCACAGGTGCTATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGTTCCCCAGGGTAAAGTaGCAGCCTCACTTATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KAGFPSPWRSLAQTVQGGFPRVK*QPHLLC Trigger: GCACAATAAGTGAGGCTGCCACTTTACCCTGGGGAA...CCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGCAGGTTGGCGACAGCTCTCAGTaGCTCACGACCTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHQLSDMTSTSTLGLRQVGDSSQ*LTTSTA Trigger: AGCTGTGGAGGTCGTGAGGCACTGAGAGCTGTCGCC...AACCTGCCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGTTCCCCAGGGTAAAGTaGCAGCCTCACTTATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: STSTLGLRQVFLLLGAHWFPRVK*QPHLLC Trigger: GCACAATAAGTGAGGCTGCCACTTTACCCTGGGGAA...CCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CCA 90 bp | CCCCGCCCCCTGAGAGTGGGACTCCTTGGAAGTTTGAATAGTGGAATGTTACAGGTACGATGGGAAAGGTaGCAAAGACCCCACAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRPLRVGLLGSLNSGMLQVRWER*QRPHSE Trigger: TTCGCTGTGGGGTCTTTGCCACCTTTCCCATCGTAC...CTGTAACATTCCACTATTCAAACTTCCAAGGAGTCCCACTCTCAGGGGGCGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | AACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCAAGTGAGCATGCGCTCTaGCTCCACCACAAACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: NFYPRAKAGFPSPWRSLASEHAL*LHHKHV Trigger: TACATGTTTGTGGTGGAGCCAGAGCGCATGCTCACT...TGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CCA 90 bp | GTTCCTCGCATCAAAGGTCCATTGCCTGGGCAAAGGCCAGGCCTACAACTGTTCAGTGAGCATGCGCTCTaGCTCCACCACAAACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPRIKGPLPGQRPGLQLFSEHAL*LHHKHV Trigger: TACATGTTTGTGGTGGAGCCAGAGCGCATGCTCACT...GAACAGTTGTAGGCCTGGCCTTTGCCCAGGCAATGGACCTTTGATGCGAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGTCTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGAGGCAGGAAGGCGTATaGTCCGTACAGCAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGLHQLSDMTSTSTLGLRRQEGV*SVQQTG Trigger: CCCTGTCTGCTGTACGGAGCATACGCCTTCCTGCCT...CCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAGACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CCA 90 bp | CTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGCAGGTTGTGGCTGAGTCGAGCTaGCAGGAAATTCCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHQLSDMTSTSTLGLRQVVAESS*QEIPEL Trigger: GAGCTCAGGAATTTCCTGCCAGCTCGACTCAGCCAC...AACCTGCCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGTCTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGGGAGCCCGAGTACGATaGGAAAGGTGGCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: KGLHQLSDMTSTSTLGLRGARVR*ERWQRP Trigger: GGGTCTTTGCCACCTTTCCCATCGTACTCGGGCTCC...CCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAGACCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CCA 90 bp | CTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGCAGGTTGGTTCCACACCAGCATaGCCAAGAGTGGCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLSDMTSTSTLGLRQVGSTPA*PRVAGK Trigger: CTTTCCTGCCACTCTTGGCCATGCTGGTGTGGAACC...AACCTGCCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CCA 90 bp | AGTGCTGTTGGGCTGGTTTGGGACGGTTTCAACAAACAGGAAGACAGAGAGAGGAGTGAGCATGCGCTCTaGCTCCACCACAAACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SAVGLVWDGFNKQEDRERSEHAL*LHHKHV Trigger: TACATGTTTGTGGTGGAGCCAGAGCGCATGCTCACT...CCTCTCTCTGTCTTCCTGTTTGTTGAAACCGTCCCAAACCAGCCCAACAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001456.11 |
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| CDS-3UTR GCA 90 bp | CTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCCTTCTTCCTCTGACTaGAGGACTAAAGCCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSDMTSTSTLGLRQVFLLPSSSD*RTKACG Trigger: ACCGCAGGCTTTAGTCCTGCAGTCAGAGGAAGAAGG...GAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CCA 90 bp | AAAGGTCTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGGGTTCCACACCAGCATaGCCAAGAGTGGCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLHQLSDMTSTSTLGLRGSTPA*PRVAGK Trigger: CTTTCCTGCCACTCTTGGCCATGCTGGTGTGGAACC...CCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAGACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR GCA 90 bp | CTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGCAGGTTCAGCCTCACTTATTGTaGTGTCTGGACCATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLSDMTSTSTLGLRQVQPHLL*CLDHPQ Trigger: CTGAGGATGGTCCAGACAGCACAATAAGTGAGGCTG...AACCTGCCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 90 bp | GGACCGGCCAGGGGGTCTCACCACGGCCTCAGCCCACTTGCGCTCTaGGGGCTCAGGGTGGCTGAGTCGAGCTGGCAGGAAATTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPARGSHHGLSPLAL*GLRVAESSWQEIPE Trigger: CTCAGGAATTTCCTGCCAGCTCGACTCAGCCACCCTGAGCCCCCAGAGCGCAAGTGGGCTGAGGCCGTGGTGAGACCCCCTGGCCGGTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 90 bp | CTCAGCCCACTTGCGCTCTGGGGGCTCAGGGTGGCTGAGTCGAGCTaGCAGGAAATTCCTGAGCTCGCCTGGTCCAGCGTCGCGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSPLALWGLRVAESS*QEIPELAWSSVAMQ Trigger: CTGCATCGCGACGCTGGACCAGGCGAGCTCAGGAATTTCCTGCCAGCTCGACTCAGCCACCCTGAGCCCCCAGAGCGCAAGTGGGCTGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 90 bp | GGTCTCACCACGGCCTCAGCCCACTTGCGCTCTGGGGGCTCAGGGTaGCTGAGTCGAGCTGGCAGGAAATTCCTGAGCTCGCCTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLTTASAHLRSGGSG*LSRAGRKFLSSPGP Trigger: TGGACCAGGCGAGCTCAGGAATTTCCTGCCAGCTCGACTCAGCCACCCTGAGCCCCCAGAGCGCAAGTGGGCTGAGGCCGTGGTGAGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CAA 90 bp | TGGGCAAAGGCCAGGCCTACAACTGTTCCAGGGAAGTGCCGAAAGCCCCCTGTGACGGCCTCAGCCCACTaGCGCTCTGGGGGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WAKARPTTVPGKCRKPPVTASAH*RSGGSG Trigger: CCCTGAGCCCCCAGAGCGCAAGTGGGCTGAGGCCGT...CACAGGGGGCTTTCGGCACTTCCCTGGAACAGTTGTAGGCCTGGCCTTTGCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS GCA 90 bp | GCTCATGGTGGGCAGCCTCGGGGCATCGAAAGGCAGGAAGGCGTATaGTCCGTACAGCAGACAGGGGAAGAAGATGAGGGCCGCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: AHGGQPRGIERQEGV*SVQQTGEEDEGRHH Trigger: GTGGTGGCGGCCCTCATCTTCTTCCCCTGTCTGCTGTACGGAGCATACGCCTTCCTGCCTTTCGATGCCCCGAGGCTGCCCACCATGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CAA 90 bp | GTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGCTGTGGCAGCAGCGGGAGCAGCTaGAGGGTGTCCTGGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VFLLLGAHWHRQFRVGCGSSGSS*RVSWGR Trigger: TCTGCCCCAGGACACCCTCAAGCTGCTCCCGCTGCT...GCCACAGCCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 90 bp | CAAAGACCCCACAGCGAAGGGTGTAAACCAAGCGGGAGCTCATGGTaGGCAGCCTCGGGGCATCGAAAGGCAGGAAGGCGTATGCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QRPHSEGCKPSGSSW*AASGHRKAGRRMLR Trigger: ACGGAGCATACGCCTTCCTGCCTTTCGATGCCCCGAGGCTGCCCACCATGAGCTCCCGCTTGGTTTACACCCTTCGCTGTGGGGTCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 90 bp | TGGCAAAGACCCCACAGCGAAGGGTGTAAACCAAGCGGGAGCTCATaGTGGGCAGCCTCGGGGCATCGAAAGGCAGGAAGGCGTATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WQRPHSEGCKPSGSS*WAASGHRKAGRRML Trigger: GAGCATACGCCTTCCTGCCTTTCGATGCCCCGAGGCTGCCCACCATGAGCTCCCGCTTGGTTTACACCCTTCGCTGTGGGGTCTTTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CAA 90 bp | TGGGAAGCTGCCCAAGAAGGAAGTGTGCTTCTCCAGTCTCGACCTTGGGCTCTCAGCAGCGGGAGCAGCTaGAGGGTGTCCTGGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WEAAQEGSVLLQSRPWALSSGSS*RVSWGR Trigger: TCTGCCCCAGGACACCCTCAAGCTGCTCCCGCTGCT...GAGAGCCCAAGGTCGAGACTGGAGAAGCACACTTCCTTCTTGGGCAGCTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CAA 90 bp | GGGTTTGTAAAGCAGCGGCTAGGAGAGAGTAAGGGTATTTGGGGCCCCAGTGGGAGCAGCGGGAGCAGCTaGAGGGTGTCCTGGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GFVKQRLGESKGIWGPSGSSGSS*RVSWGR Trigger: TCTGCCCCAGGACACCCTCAAGCTGCTCCCGCTGCT...CCCACTGGGGCCCCAAATACCCTTACTCTCTCCTAGCCGCTGCTTTACAAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS GCA 90 bp | GGGGACTCAGTCCCACCTTCTTCCTCTGACTGCAGGACTAAAGCCTaGGGTGGGCTCTTCTCTGGAGTCTCGGGTTCCTTCATGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GDSVPPSSSDCRTKA*GGLFSGVSGSFMSS Trigger: GCTGGACATGAAGGAACCCGAGACTCCAGAGAAGAGCCCACCGCAGGCTTTAGTCCTGCAGTCAGAGGAAGAAGGTGGGACTGAGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 ENSMUST00000193872.2 |
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| CDS TCA 90 bp | CAGACCGAGCATGGTCAGGGTAGTCCAAGCGGCTCTCGGAGGCAGTaGGCATGCGCTCTGGCTCCACCACAAACATGTAATAGAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QTEHGQGSPSGSRRQ*ACALAPPQTCNRGS Trigger: GGAACCTCTATTACATGTTTGTGGTGGAGCCAGAGCGCATGCTCACTGCCTCCGAGAGCCGCTTGGACTACCCTGACCATGCTCGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS CCA 90 bp | ATAGGCTCAGCCCGTACACAAGGAGCCCGAGTACGATGGGAAAGGTaGCAAAGACCCCACAGCGAAGGGTGTAAACCAAGCGGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IGSARTQGARVRWER*QRPHSEGCKPSGSS Trigger: TGAGCTCCCGCTTGGTTTACACCCTTCGCTGTGGGGTCTTTGCCACCTTTCCCATCGTACTCGGGCTCCTTGTGTACGGGCTGAGCCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS CCA 90 bp | GTCAGGGTAGTCCAAGCGGCTCTCGGAGGCAGTGAGCATGCGCTCTaGCTCCACCACAAACATGTAATAGAGGTTCCACACCAGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRVVQAALGGSEHAL*LHHKHVIEVPHQHG Trigger: GCCATGCTGGTGTGGAACCTCTATTACATGTTTGTGGTGGAGCCAGAGCGCATGCTCACTGCCTCCGAGAGCCGCTTGGACTACCCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCACAGACAGTTCAGGGTGGGTTCTCGGGGAGCAGGTaGGCATCCTCTTTGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KAGFPSPWRSLAQTVQGGFSGSR*ASSLNG Trigger: GCCATTCAAAGAGGATGCCAACCTGCTCCCCGAGAA...CCCACCCTGAACTGTCTGTGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCTTCACCAACTATCTGACATGACATCAACTTCTACCCTCGGGCTAAGGACGGCCTCAGCCCACTaGCGCTCTGGGGGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KGLHQLSDMTSTSTLGLRTASAH*RSGGSG Trigger: CCCTGAGCCCCCAGAGCGCAAGTGGGCTGAGGCCGT...CCTTAGCCCGAGGGTAGAAGTTGATGTCATGTCAGATAGTTGGTGAAGACCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
||
| CDS CCA 90 bp | CACCACAAACATGTAATAGAGGTTCCACACCAGCATGGCCAAGAGTaGCAGGAAAGTCAGGCCATAGCCAAAGCCTCGGAAGGAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HHKHVIEVPHQHGQE*QESQAIAKASEGAA Trigger: GGCCGCTCCTTCCGAGGCTTTGGCTATGGCCTGACTTTCCTGCCACTCTTGGCCATGCTGGTGTGGAACCTCTATTACATGTTTGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CAA 90 bp | TCTCGACCTTGGGCTCTCATCCTCTGGGTTTGTAAAGCAGCGGCTAGGAGAGAGTTCTCGGGGAGCAGGTaGGCATCCTCTTTGAATGGC | + |
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Preference number: 5 (lower is better) Translates to: SRPWALILWVCKAAARREFSGSR*ASSLNG Trigger: GCCATTCAAAGAGGATGCCAACCTGCTCCCCGAGAA...CTCTCTCCTAGCCGCTGCTTTACAAACCCAGAGGATGAGAGCCCAAGGTCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS-3UTR CAA 90 bp | AACTTCTACCCTCGGGCTAAGGCAGGTTTTCCTTCTCCTTGGCGCTCACTGGCATTCTCGGGGAGCAGGTaGGCATCCTCTTTGAATGGC | + |
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Preference number: 5 (lower is better) Translates to: NFYPRAKAGFPSPWRSLAFSGSR*ASSLNG Trigger: GCCATTCAAAGAGGATGCCAACCTGCTCCCCGAGAA...TGCCAGTGAGCGCCAAGGAGAAGGAAAACCTGCCTTAGCCCGAGGGTAGAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 90 bp | GCTCTGGCTCCACCACAAACATGTAATAGAGGTTCCACACCAGCATaGCCAAGAGTGGCAGGAAAGTCAGGCCATAGCCAAAGCCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: ALAPPQTCNRGSTPA*PRVAGKSGHSQSLG Trigger: TCCGAGGCTTTGGCTATGGCCTGACTTTCCTGCCACTCTTGGCCATGCTGGTGTGGAACCTCTATTACATGTTTGTGGTGGAGCCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 72 bp | AGGGGGTCTCACCACGGCCTCAGCCCACTTGCGCTCTaGGGGCTCAGGGTGGCTGAGTCGAGCTGGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RGSHHGLSPLAL*GLRVAESSWQE Trigger: TTCCTGCCAGCTCGACTCAGCCACCCTGAGCCCCCAGAGCGCAAGTGGGCTGAGGCCGTGGTGAGACCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 72 bp | CTTGCGCTCTGGGGGCTCAGGGTGGCTGAGTCGAGCTaGCAGGAAATTCCTGAGCTCGCCTGGTCCAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: LALWGLRVAESS*QEIPELAWSSV Trigger: GACGCTGGACCAGGCGAGCTCAGGAATTTCCTGCCAGCTCGACTCAGCCACCCTGAGCCCCCAGAGCGCAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 72 bp | ACGGCCTCAGCCCACTTGCGCTCTGGGGGCTCAGGGTaGCTGAGTCGAGCTGGCAGGAAATTCCTGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: TASAHLRSGGSG*LSRAGRKFLSS Trigger: CGAGCTCAGGAATTTCCTGCCAGCTCGACTCAGCCACCCTGAGCCCCCAGAGCGCAAGTGGGCTGAGGCCGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 72 bp | ATGAAGAGCTGCACAGACTGGGCCACGTACTGCCGGTaGATCTCCACTTCCCGCCTCGGCTCGCCGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: MKSCTDWATYCR*ISTSRLGSPKG Trigger: GCCCTTCGGCGAGCCGAGGCGGGAAGTGGAGATCCACCGGCAGTACGTGGCCCAGTCTGTGCAGCTCTTCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 72 bp | CACAGCGAAGGGTGTAAACCAAGCGGGAGCTCATGGTaGGCAGCCTCGGGGCATCGAAAGGCAGGAAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: HSEGCKPSGSSW*AASGHRKAGRR Trigger: ACGCCTTCCTGCCTTTCGATGCCCCGAGGCTGCCCACCATGAGCTCCCGCTTGGTTTACACCCTTCGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 72 bp | GCCCGTACACAAGGAGCCCGAGTACGATGGGAAAGGTaGCAAAGACCCCACAGCGAAGGGTGTAAACCAAGC | + |
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Preference number: 6 (lower is better) Translates to: ARTQGARVRWER*QRPHSEGCKPS Trigger: GCTTGGTTTACACCCTTCGCTGTGGGGTCTTTGCCACCTTTCCCATCGTACTCGGGCTCCTTGTGTACGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 72 bp | ATAGGCTCAGCCCGTACACAAGGAGCCCGAGTACGATaGGAAAGGTGGCAAAGACCCCACAGCGAAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: IGSARTQGARVR*ERWQRPHSEGC Trigger: ACACCCTTCGCTGTGGGGTCTTTGCCACCTTTCCCATCGTACTCGGGCTCCTTGTGTACGGGCTGAGCCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CAA 90 bp | ACGAAGGCCCTAACTGTCTTCTCGGGGAGCAGGTTGGCATCCTCTTaGAATGGCTCCTCCGACTTAGTAGGTGCCTCTGACTCTAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: TKALTVFSGSRLASS*NGSSDLVGASDSRG Trigger: GCCCCTAGAGTCAGAGGCACCTACTAAGTCGGAGGAGCCATTCAAAGAGGATGCCAACCTGCTCCCCGAGAAGACAGTTAGGGCCTTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 ENSMUST00000193872.2 |
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| CDS TCA 72 bp | CATGGTCAGGGTAGTCCAAGCGGCTCTCGGAGGCAGTaGGCATGCGCTCTGGCTCCACCACAAACATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: HGQGSPSGSRRQ*ACALAPPQTCN Trigger: ATTACATGTTTGTGGTGGAGCCAGAGCGCATGCTCACTGCCTCCGAGAGCCGCTTGGACTACCCTGACCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CCA 72 bp | GTCCAAGCGGCTCTCGGAGGCAGTGAGCATGCGCTCTaGCTCCACCACAAACATGTAATAGAGGTTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: VQAALGGSEHAL*LHHKHVIEVPH Trigger: GTGTGGAACCTCTATTACATGTTTGTGGTGGAGCCAGAGCGCATGCTCACTGCCTCCGAGAGCCGCTTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 |
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| CDS CAA 72 bp | GGCACGAAGGCCCTAACTGTCTTCTCGGGGAGCAGGTaGGCATCCTCTTTGAATGGCTCCTCCGACTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: GTKALTVFSGSR*ASSLNGSSDLV Trigger: TACTAAGTCGGAGGAGCCATTCAAAGAGGATGCCAACCTGCTCCCCGAGAAGACAGTTAGGGCCTTCGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 ENSMUST00000193872.2 |
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| CDS CAA 90 bp | AGATCAATGGGCACGAAGGCCCTAACTGTCTTCTCGGGGAGCAGGTaGGCATCCTCTTTGAATGGCTCCTCCGACTTAGTAGGTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RSMGTKALTVFSGSR*ASSLNGSSDLVGAS Trigger: AGAGGCACCTACTAAGTCGGAGGAGCCATTCAAAGAGGATGCCAACCTGCTCCCCGAGAAGACAGTTAGGGCCTTCGTGCCCATTGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001456.11 ENSMUST00000107552.2 ENSMUST00000107553.8 ENSMUST00000193872.2 |
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