Pregenerated sensors for TMEM74B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044364Ensembl transcript IDs: ENSMUST00000060196.3, ENSMUST00000109872.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGCGTCAGGACTGACCCAGATGCCACACCTCCCAGGAAGAGGTTaGCATGGCAGCTGCCTTCTTTTCCCATCTCTGTTCCTCTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: LASGLTQMPHLPGRG*HGSCLLFPSLFLWA Trigger: GGCCCAGAGGAACAGAGATGGGAAAAGAAGGCAGCTGCCATGCCAACCTCTTCCTGGGAGGTGTGGCATCTGGGTCAGTCCTGACGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR CCA 90 bp | AGGGCTGCCAAGTTGAGGCACAGAGTCAAAGCCATGTCCCCCGACTaGAGTAAGAAGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RAAKLRHRVKAMSPD*SKKGRKGEPGCAAV Trigger: CACTGCAGCACACCCTGGCTCTCCTTTACGGCCCTTCTTACTCCAGTCGGGGGACATGGCTTTGACTCTGTGCCTCAACTTGGCAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR GCA 90 bp | CTGACCCAGATGCCACACCTCCCAGGAAGAGGTTGGCATGGCAGCTaGCTTCTTTTCCCATCTCTGTTCCTCTGGGCCAGAAGAATGGGT | + |
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Preference number: 1 (lower is better) Translates to: LTQMPHLPGRGWHGS*LLFPSLFLWARRMG Trigger: ACCCATTCTTCTGGCCCAGAGGAACAGAGATGGGAAAAGAAGGCAGCTGCCATGCCAACCTCTTCCTGGGAGGTGTGGCATCTGGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR CCA 90 bp | GAGATCAGCAGCTACCACCTTAACCCTGGAGACTCAGAAATCAAGTaGGGGAGGGCTGCCAAGTTGAGGCACAGAGTCAAAGCCATGTCC | + |
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Preference number: 1 (lower is better) Translates to: EISSYHLNPGDSEIK*GRAAKLRHRVKAMS Trigger: GGACATGGCTTTGACTCTGTGCCTCAACTTGGCAGCCCTCCCCCACTTGATTTCTGAGTCTCCAGGGTTAAGGTGGTAGCTGCTGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR CAA 90 bp | CCTGGCGTCAGGACTGACCCAGATGCCACACCTCCCAGGAAGAGGTaGGCATGGCAGCTGCCTTCTTTTCCCATCTCTGTTCCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PGVRTDPDATPPRKR*AWQLPSFPISVPLG Trigger: GCCCAGAGGAACAGAGATGGGAAAAGAAGGCAGCTGCCATGCCAACCTCTTCCTGGGAGGTGTGGCATCTGGGTCAGTCCTGACGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR CAA 90 bp | CTTAACCCTGGAGACTCAGAAATCAAGTGGGGGAGGGCTGCCAAGTaGAGGCACAGAGTCAAAGCCATGTCCCCCGACTGGAGTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LNPGDSEIKWGRAAK*RHRVKAMSPDWSKK Trigger: CTTCTTACTCCAGTCGGGGGACATGGCTTTGACTCTGTGCCTCAACTTGGCAGCCCTCCCCCACTTGATTTCTGAGTCTCCAGGGTTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGGCATGGCAGCTGCCTTCTTTTCCCATCTCTGTTCCTCTGGGCCAGAAGGGTGTGCTGCAGTGTTaGCTCCACAGTGCATCTGTT | + |
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Preference number: 2 (lower is better) Translates to: RLAWQLPSFPISVPLGQKGVLQC*LHSASV Trigger: AACAGATGCACTGTGGAGGCAACACTGCAGCACACC...CTTCTGGCCCAGAGGAACAGAGATGGGAAAAGAAGGCAGCTGCCATGCCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR CAA 90 bp | TGGAGTAAGAAGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGTGTaGCCTCCACAGTGCATCTGTTATAGAAGATTCTTCCAGACAAAC | + |
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Preference number: 2 (lower is better) Translates to: WSKKGRKGEPGCAAV*PPQCICYRRFFQTN Trigger: GTTTGTCTGGAAGAATCTTCTATAACAGATGCACTGTGGAGGCAACACTGCAGCACACCCTGGCTCTCCTTTACGGCCCTTCTTACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR TCA 72 bp | CTCAAGCTGCAAACGCATCAGCAGTGTTTGCCTGAGTaGCGCCTAAGCCAGGCCCCAGGCTACCCCCACCCC | + |
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Preference number: 3 (lower is better) Translates to: LKLQTHQQCLPE*RLSQAPGYPHP Trigger: GGGGTGGGGGTAGCCTGGGGCCTGGCTTAGGCGTCACTCAGGCAAACACTGCTGATGCGTTTGCAGCTTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| 3UTR TCA 72 bp | GAGACTCAGAAATCAAGTGGGGGAGGGCTGCCAAGTTaGGGCACAGAGTCAAAGCCATGTCCCCCGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: ETQKSSGGGLPS*GTESKPCPPTG Trigger: TCCAGTCGGGGGACATGGCTTTGACTCTGTGCCTCAACTTGGCAGCCCTCCCCCACTTGATTTCTGAGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR GCA 72 bp | ATGCCACACCTCCCAGGAAGAGGTTGGCATGGCAGCTaGCTTCTTTTCCCATCTCTGTTCCTCTGGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: MPHLPGRGWHGS*LLFPSLFLWAR Trigger: TCTGGCCCAGAGGAACAGAGATGGGAAAAGAAGGCAGCTGCCATGCCAACCTCTTCCTGGGAGGTGTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR CCA 72 bp | GGACTGACCCAGATGCCACACCTCCCAGGAAGAGGTTaGCATGGCAGCTGCCTTCTTTTCCCATCTCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: GLTQMPHLPGRG*HGSCLLFPSLF Trigger: GAACAGAGATGGGAAAAGAAGGCAGCTGCCATGCCAACCTCTTCCTGGGAGGTGTGGCATCTGGGTCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR TCA 72 bp | AAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTaGAGCCCCAGGTTTTGGGAACCTCCAAGCTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: KLPLQCPPWVSL*SPRFWEPPSSA Trigger: TGCAGAGCTTGGAGGTTCCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| 3UTR GCA 72 bp | AGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGTGTTaGCTCCACAGTGCATCTGTTATAGAAGATTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: RAVKESQGVLQC*LHSASVIEDSS Trigger: GGAAGAATCTTCTATAACAGATGCACTGTGGAGGCAACACTGCAGCACACCCTGGCTCTCCTTTACGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR TCA 72 bp | TTTCCCATCTCTGTTCCTCTGGGCCAGAAGAATGGGTaGGTCTCTTTTCATTTTCTGCTTTCCCTTAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: FPISVPLGQKNG*VSFHFLLSLKA Trigger: GGCCTTAAGGGAAAGCAGAAAATGAAAAGAGACTCACCCATTCTTCTGGCCCAGAGGAACAGAGATGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR GCA 90 bp | TCAGCAGCTACCACCTTAACCCTGGAGACTCAGAAATCAAGTGGGGGAGGGCTGGGCGCCACGGGGCCCTaGGAGGCCGCTCTCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SAATTLTLETQKSSGGGLGATGP*EAALLG Trigger: TCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCC...CAGCCCTCCCCCACTTGATTTCTGAGTCTCCAGGGTTAAGGTGGTAGCTGCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR GCA 90 bp | AACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTGGGGGCGCCACGGGGCCCTaGGAGGCCGCTCTCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: NSLYNALHGCHFEAPGFGGATGP*EAALLG Trigger: TCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCC...CCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CCA 90 bp | TGTCCCCCGACTGGAGTAAGAAGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGGAAAGATCATCCCGCTaGGACCGGGACAGTGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: CPPTGVRRAVKESQGVLQERSSR*DRDSEG Trigger: CCCCTCACTGTCCCGGTCCCAGCGGGATGATCTTTC...CTGCAGCACACCCTGGCTCTCCTTTACGGCCCTTCTTACTCCAGTCGGGGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR TCA 90 bp | TCAGCAGCTACCACCTTAACCCTGGAGACTCAGAAATCAAGTGGGGGAGGGCTGTCACTGTGTCAGGGTTaGCCCGGGCCTCTCGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SAATTLTLETQKSSGGGLSLCQG*PGPLGG Trigger: TCCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGA...CAGCCCTCCCCCACTTGATTTCTGAGTCTCCAGGGTTAAGGTGGTAGCTGCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR TCA 90 bp | ACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTGGGAGCATGCCACCCACTGTaGGCAGCCCGAGGCCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: TPSTMPSMGVTLKPQVLGACHPL*AARGPQ Trigger: TTGCGGGCCTCGGGCTGCTCACAGTGGGTGGCATGC...TCCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CCA 90 bp | AAGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGTGTTGCCTCCACAGTGCATCCGAGGCCGCTCTCCTTaGAACCTGGGGACCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: KGRKGEPGCAAVLPPQCIRGRSP*NLGTIA Trigger: AGCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCG...GATGCACTGTGGAGGCAACACTGCAGCACACCCTGGCTCTCCTTTACGGCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR CCA 90 bp | ACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTGGGATCTCCACACCCATCCTaGGTGGCGCCACGGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TPSTMPSMGVTLKPQVLGSPHPS*VAPRGP Trigger: AGGGCCCCGTGGCGCCACCCAGGATGGGTGTGGAGA...TCCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR TCA 90 bp | CCACCCCAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAATCACTGTGTCAGGGTTaGCCCGGGCCTCTCGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: PPQHQNSLYNALHGCHFESLCQG*PGPLGG Trigger: TCCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGA...TTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTGGGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR GCA 90 bp | AAGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGTGTTGCCTCCACAGTGCATCTCGGGGGATGGCGTATaGTGTCACCACCAGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: KGRKGEPGCAAVLPPQCISGDGV*CHHQED Trigger: ATCCTCCTGGTGGTGACAGCATACGCCATCCCCCGA...GATGCACTGTGGAGGCAACACTGCAGCACACCCTGGCTCTCCTTTACGGCCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR CCA 90 bp | AACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTGGGCACCTCCAGGGGGACTaGGGGCGTTACCCAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: NSLYNALHGCHFEAPGFGHLQGD*GRYPVW Trigger: CCAGACTGGGTAACGCCCCCAGTCCCCCTGGAGGTG...CCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CCA 90 bp | TCAGCAGCTACCACCTTAACCCTGGAGACTCAGAAATCAAGTGGGGGAGGGCTGGGGCCTCTCGGGGGATaGCGTATGCTGTCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: SAATTLTLETQKSSGGGLGPLGG*RMLSPP Trigger: TGGTGGTGACAGCATACGCCATCCCCCGAGAGGCCC...CAGCCCTCCCCCACTTGATTTCTGAGTCTCCAGGGTTAAGGTGGTAGCTGCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR TCA 90 bp | AAGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGTGTTGCCTCCACAGTGCATCCCAGGGTTCTGGAAATaGGTCTCCTGCTCCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: KGRKGEPGCAAVLPPQCIPGFWK*VSCSSE Trigger: CTCTGAGGAGCAGGAGACTCATTTCCAGAACCCTGG...GATGCACTGTGGAGGCAACACTGCAGCACACCCTGGCTCTCCTTTACGGCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR CCA 90 bp | AGGAGATCAGCAGCTACCACCTTAACCCTGGAGACTCAGAAATCAAGTGGGGGACACCTCCAGGGGGACTaGGGGCGTTACCCAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RRSAATTLTLETQKSSGGHLQGD*GRYPVW Trigger: CCAGACTGGGTAACGCCCCCAGTCCCCCTGGAGGTG...TCCCCCACTTGATTTCTGAGTCTCCAGGGTTAAGGTGGTAGCTGCTGATCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCGAAAGATCATCCCGCTaGGACCGGGACAGTGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PQHQNSLYNALHGCHFEAERSSR*DRDSEG Trigger: CCCCTCACTGTCCCGGTCCCAGCGGGATGATCTTTC...GGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CCA 90 bp | CAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGGCCTCTCGGGGGATaGCGTATGCTGTCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: QHQNSLYNALHGCHFEAPGPLGG*RMLSPP Trigger: TGGTGGTGACAGCATACGCCATCCCCCGAGAGGCCC...TGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| 3UTR CAA 72 bp | GGAGACTCAGAAATCAAGTGGGGGAGGGCTGCCAAGTaGAGGCACAGAGTCAAAGCCATGTCCCCCGACTGG | + |
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Preference number: 4 (lower is better) Translates to: GDSEIKWGRAAK*RHRVKAMSPDW Trigger: CCAGTCGGGGGACATGGCTTTGACTCTGTGCCTCAACTTGGCAGCCCTCCCCCACTTGATTTCTGAGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR TCA 90 bp | CCCCAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCGCCCGAGGCCCGCAATaGTGCATTTGTCCAGATGTG | + |
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Preference number: 4 (lower is better) Translates to: PQHQNSLYNALHGCHFEAARGPQ*CICPDV Trigger: CACATCTGGACAAATGCATCATTGCGGGCCTCGGGC...GGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR TCA 90 bp | TGCTGGGAGAGTGACAGCAATAGTGACAGCTCACCGCCGGGCACCCAACCCCCGGGTATAGCTGGTCTCTaGGACTTGAACAACCTCATT | + |
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Preference number: 4 (lower is better) Translates to: CWESDSNSDSSPPGTQPPGIAGL*DLNNLI Trigger: AATGAGGTTGTTCAAGTCTCAGAGACCAGCTATACC...CGGGGGTTGGGTGCCCGGCGGTGAGCTGTCACTATTGCTGTCACTCTCCCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR CCA 90 bp | AACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTGGGCGAGGCCGCTCTCCTTaGAACCTGGGGACCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: NSLYNALHGCHFEAPGFGRGRSP*NLGTIA Trigger: AGCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCG...CCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CCA 90 bp | CAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGGCGTTACCCAGTCTaGCATCCCCAGGGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: QHQNSLYNALHGCHFEAPGRYPV*HPQGSG Trigger: TCCAGAACCCTGGGGATGCCAGACTGGGTAACGCCC...TGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR TCA 90 bp | CCCCAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGGTTCTGGAAATaGGTCTCCTGCTCCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PQHQNSLYNALHGCHFEAPGFWK*VSCSSE Trigger: CTCTGAGGAGCAGGAGACTCATTTCCAGAACCCTGG...GGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR TCA 90 bp | TCTCTTTTCATTTTCTGCTTTCCCTTAAGGCCAGGAGATCAGCAGCTACCACCTGCATGCCACCCACTGTaGGCAGCCCGAGGCCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: SLFIFCFPLRPGDQQLPPACHPL*AARGPQ Trigger: TTGCGGGCCTCGGGCTGCTCACAGTGGGTGGCATGC...AGGTGGTAGCTGCTGATCTCCTGGCCTTAAGGGAAAGCAGAAAATGAAAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR CCA 90 bp | GTAAAGGAGAGCCAGGGTGTGCTGCAGTGTTGCCTCCACAGTGCATCTGTTATAGGGCGTTACCCAGTCTaGCATCCCCAGGGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VKESQGVLQCCLHSASVIGRYPV*HPQGSG Trigger: TCCAGAACCCTGGGGATGCCAGACTGGGTAACGCCC...TATAACAGATGCACTGTGGAGGCAACACTGCAGCACACCCTGGCTCTCCTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR TCA 90 bp | CCACCCCAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAATGCACAGAGAGACCATaGGCAGCACAGAGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PPQHQNSLYNALHGCHFECTERP*AAQRGA Trigger: TGCTCCTCTCTGTGCTGCTCATGGTCTCTCTGTGCA...TTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR TCA 90 bp | TGTCCCCCGACTGGAGTAAGAAGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGCTGGTCTCTGAGACTTaGACAACCTCATTCTCTACT | + |
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Preference number: 4 (lower is better) Translates to: CPPTGVRRAVKESQGVLQLVSET*TTSFST Trigger: AGTAGAGAATGAGGTTGTTCAAGTCTCAGAGACCAG...CTGCAGCACACCCTGGCTCTCCTTTACGGCCCTTCTTACTCCAGTCGGGGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR GCA 90 bp | ACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTCGGGGGATGGCGTATaGTGTCACCACCAGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TKTPSTMPSMGVTLKPQVSGDGV*CHHQED Trigger: ATCCTCCTGGTGGTGACAGCATACGCCATCCCCCGA...AACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR GCA 90 bp | AACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTGGGTCTTTCTGGATCCCCTaGCGGGGACAAAGGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: NSLYNALHGCHFEAPGFGSFWIP*RGQRSV Trigger: GACAGACCTTTGTCCCCGGCAGGGGATCCAGAAAGA...CCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTCCGTCCCCAGTGAGCTaGCTCATACGCAGGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: TKTPSTMPSMGVTLKPQVPSPVS*LIRRLM Trigger: CATCAACCTGCGTATGAGGCAGCTCACTGGGGACGG...AACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR TCA 90 bp | AGGAGATCAGCAGCTACCACCTTAACCCTGGAGACTCAGAAATCAAGTGGGGGATGCACAGAGAGACCATaGGCAGCACAGAGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: RRSAATTLTLETQKSSGGCTERP*AAQRGA Trigger: TGCTCCTCTCTGTGCTGCTCATGGTCTCTCTGTGCA...TCCCCCACTTGATTTCTGAGTCTCCAGGGTTAAGGTGGTAGCTGCTGATCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR GCA 90 bp | GTAAGAAGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGTGTTGCCTCCACAGTGAACCTGGGGACCATTaGTCAATGTCTTCAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VRRAVKESQGVLQCCLHSEPGDH*SMSSVP Trigger: TGGAACTGAAGACATTGAGCAATGGTCCCCAGGTTC...ACTGTGGAGGCAACACTGCAGCACACCCTGGCTCTCCTTTACGGCCCTTCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCGGTCCCTCCTCTGAATaGAAAGAAAGATCATCCCGC | + |
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Preference number: 4 (lower is better) Translates to: PQHQNSLYNALHGCHFEAGPSSE*KERSSR Trigger: GCGGGATGATCTTTCTTTGCATTCAGAGGAGGGACC...GGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR GCA 90 bp | CAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGCGTTCCATCTCCCTTaGTGTCACTGTGTCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: QHQNSLYNALHGCHFEAPAFHLP*CHCVRV Trigger: AACCCTGACACAGTGACAGCAAGGGAGATGGAACGC...TGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR GCA 90 bp | AGGAGATCAGCAGCTACCACCTTAACCCTGGAGACTCAGAAATCAAGTGGGGGATCTTTCTGGATCCCCTaGCGGGGACAAAGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRSAATTLTLETQKSSGGSFWIP*RGQRSV Trigger: GACAGACCTTTGTCCCCGGCAGGGGATCCAGAAAGA...TCCCCCACTTGATTTCTGAGTCTCCAGGGTTAAGGTGGTAGCTGCTGATCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR CCA 90 bp | ACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTGCTCTCCTTGGAACCTaGGGACCATTGCTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKTPSTMPSMGVTLKPQVALLGT*GPLLNV Trigger: GACATTGAGCAATGGTCCCCAGGTTCCAAGGAGAGC...AACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CCA 90 bp | AGGAGATCAGCAGCTACCACCTTAACCCTGGAGACTCAGAAATCAAGTGGGGGAGCTCTCCTTGGAACCTaGGGACCATTGCTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRSAATTLTLETQKSSGGALLGT*GPLLNV Trigger: GACATTGAGCAATGGTCCCCAGGTTCCAAGGAGAGC...TCCCCCACTTGATTTCTGAGTCTCCAGGGTTAAGGTGGTAGCTGCTGATCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR GCA 90 bp | AACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTGGGGAACCTGGGGACCATTaGTCAATGTCTTCAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLYNALHGCHFEAPGFGEPGDH*SMSSVP Trigger: TGGAACTGAAGACATTGAGCAATGGTCCCCAGGTTC...CCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR GCA 90 bp | TCTCTTTTCATTTTCTGCTTTCCCTTAAGGCCAGGAGATCAGCAGCTACCACCTCCGTCCCCAGTGAGCTaGCTCATACGCAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLFIFCFPLRPGDQQLPPPSPVS*LIRRLM Trigger: CATCAACCTGCGTATGAGGCAGCTCACTGGGGACGG...AGGTGGTAGCTGCTGATCTCCTGGCCTTAAGGGAAAGCAGAAAATGAAAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| 3UTR CAA 72 bp | AAGGGCCGTAAAGGAGAGCCAGGGTGTGCTGCAGTGTaGCCTCCACAGTGCATCTGTTATAGAAGATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGRKGEPGCAAV*PPQCICYRRFF Trigger: GAAGAATCTTCTATAACAGATGCACTGTGGAGGCAACACTGCAGCACACCCTGGCTCTCCTTTACGGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR TCA 90 bp | ACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTGGGAGGTATAGCTGGTCTCTaGGACTTGAACAACCTCATT | + |
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Preference number: 4 (lower is better) Translates to: TPSTMPSMGVTLKPQVLGGIAGL*DLNNLI Trigger: AATGAGGTTGTTCAAGTCTCAGAGACCAGCTATACC...TCCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR GCA 90 bp | TTCCCATCTCTGTTCCTCTGGGCCAGAAGAATGGGTGAGTCTCTTTTCATTTTCGCGTTCCATCTCCCTTaGTGTCACTGTGTCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: FPSLFLWARRMGESLFIFAFHLP*CHCVRV Trigger: AACCCTGACACAGTGACAGCAAGGGAGATGGAACGC...GAAAATGAAAAGAGACTCACCCATTCTTCTGGCCCAGAGGAACAGAGATGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS-3UTR CCA 90 bp | ACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTCCTGAGTGGTATAGCTaGTCTCTGAGACTTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TKTPSTMPSMGVTLKPQVPEWYS*SLRLEQ Trigger: TTGTTCAAGTCTCAGAGACCAGCTATACCACTCAGG...AACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR TCA 90 bp | CAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTCTGGTCTCTGAGACTTaGACAACCTCATTCTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: QNSLYNALHGCHFEAPGFLVSET*TTSFST Trigger: AGTAGAGAATGAGGTTGTTCAAGTCTCAGAGACCAG...AAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CCA 90 bp | TTTCATTTTCTGCTTTCCCTTAAGGCCAGGAGATCAGCAGCTACCACCTTAACCCCTGAGTGGTATAGCTaGTCTCTGAGACTTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FHFLLSLKARRSAATTLTPEWYS*SLRLEQ Trigger: TTGTTCAAGTCTCAGAGACCAGCTATACCACTCAGG...GGTTAAGGTGGTAGCTGCTGATCTCCTGGCCTTAAGGGAAAGCAGAAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS CCA 90 bp | CTGCTCCTCAGAGAAGAAGCAGGCATTCTCCACACCCATCCTGGGTaGCGCCACGGGGCCCTGCGAGGCCGCTCTCCTTGGAACCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLREEAGILHTHPG*RHGALRGRSPWNLG Trigger: CCCCAGGTTCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCAGGATGGGTGTGGAGAATGCCTGCTTCTTCTCTGAGGAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS GCA 90 bp | AAGCAGGCATTCTCCACACCCATCCTGGGTGGCGCCACGGGGCCCTaGGAGGCCGCTCTCCTTGGAACCTGGGGACCATTGCTCAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KQAFSTPILGGATGP*EAALLGTWGPLLNV Trigger: GACATTGAGCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCAGGATGGGTGTGGAGAATGCCTGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CCA 90 bp | CTGGGTGGCGCCACGGGGCCCTGCGAGGCCGCTCTCCTTGGAACCTaGGGACCATTGCTCAATGTCTTCAGTTCCAGACCAGGGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGGATGPCEAALLGT*GPLLNVFSSRPGGD Trigger: ATCTCCCCCTGGTCTGGAACTGAAGACATTGAGCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CCA 90 bp | ACCCATCCTGGGTGGCGCCACGGGGCCCTGCGAGGCCGCTCTCCTTaGAACCTGGGGACCATTGCTCAATGTCTTCAGTTCCAGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: THPGWRHGALRGRSP*NLGTIAQCLQFQTR Trigger: CCTGGTCTGGAACTGAAGACATTGAGCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCAGGATGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CCA 90 bp | TCTCCTGCTCCTCAGAGAAGAAGCAGGCATTCTCCACACCCATCCTaGGTGGCGCCACGGGGCCCTGCGAGGCCGCTCTCCTTGGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAPQRRSRHSPHPS*VAPRGPARPLSLEP Trigger: AGGTTCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCAGGATGGGTGTGGAGAATGCCTGCTTCTTCTCTGAGGAGCAGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS-3UTR CAA 90 bp | ATAGGGACTGCTGGGAGAGTGACAGCAATAGTGACAGCTCACCGCCGGGCACCCGCGAGGCCGCTCTCCTaGGAACCTGGGGACCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: IGTAGRVTAIVTAHRRAPARPLS*EPGDHC Trigger: GCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCGC...GGGTGCCCGGCGGTGAGCTGTCACTATTGCTGTCACTCTCCCAGCAGTCCCTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS GCA 90 bp | TCCACCGGGCGGCTCACAGGTTCCAGGCCTGGTCCCTCCTCTGAATaGAAAGAAAGATCATCCCGCTGGGACCGGGACAGTGAGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: STGRLTGSRPGPSSE*KERSSRWDRDSEGT Trigger: TGTCCCCTCACTGTCCCGGTCCCAGCGGGATGATCTTTCTTTGCATTCAGAGGAGGGACCAGGCCTGGAACCTGTGAGCCGCCCGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS TCA 90 bp | ACATCTCCAGGCGTTCCATCTCCCTTGCTGTCACTGTGTCAGGGTTaGCCCGGGCCTCTCGGGGGATGGCGTATGCTGTCACCACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSPGVPSPLLSLCQG*PGPLGGWRMLSPPG Trigger: TCCTGGTGGTGACAGCATACGCCATCCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGACAGCAAGGGAGATGGAACGCCTGGAGATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS-3UTR CAA 90 bp | AGGTTGGCATGGCAGCTGCCTTCTTTTCCCATCTCTGTTCCTCTGGGCCAGAAGGTCACTGTGTCAGGGTaGACCCGGGCCTCTCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLAWQLPSFPISVPLGQKVTVSG*TRASRG Trigger: CCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGAC...CTTCTGGCCCAGAGGAACAGAGATGGGAAAAGAAGGCAGCTGCCATGCCAACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS GCA 90 bp | TGTCACTGTGTCAGGGTTGACCCGGGCCTCTCGGGGGATGGCGTATaGTGTCACCACCAGGAGGATTCCGCTCACCAAGAAAACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CHCVRVDPGLSGDGV*CHHQEDSAHQENQS Trigger: GCTCTGGTTTTCTTGGTGAGCGGAATCCTCCTGGTGGTGACAGCATACGCCATCCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS-3UTR CAA 90 bp | CCACCCCAGCACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGTCACTGTGTCAGGGTaGACCCGGGCCTCTCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPQHQNSLYNALHGCHFEVTVSG*TRASRG Trigger: CCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGAC...TTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGTGCTGGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS TCA 90 bp | GGACTGGGGGCGTTACCCAGTCTGGCATCCCCAGGGTTCTGGAAATaGGTCTCCTGCTCCTCAGAGAAGAAGCAGGCATTCTCCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: GLGALPSLASPGFWK*VSCSSEKKQAFSTP Trigger: GGGTGTGGAGAATGCCTGCTTCTTCTCTGAGGAGCAGGAGACTCATTTCCAGAACCCTGGGGATGCCAGACTGGGTAACGCCCCCAGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS TCA 90 bp | CACTGTGAGCAGCCCGAGGCCCGCAATGATGCATTTGTCCAGATGTaGGCCCAAGCGGGCGTAGTACATCTCCAGGCGTTCCATCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HCEQPEARNDAFVQM*AQAGVVHLQAFHLP Trigger: AGGGAGATGGAACGCCTGGAGATGTACTACGCCCGCTTGGGCTCACATCTGGACAAATGCATCATTGCGGGCCTCGGGCTGCTCACAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS-3UTR CAA 90 bp | AACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTGGGGCGAGGCCGCTCTCCTaGGAACCTGGGGACCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: NSLYNALHGCHFEAPGFGARPLS*EPGDHC Trigger: GCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCGC...CCCAAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CAA 90 bp | CAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTTTCGGTACAGCTCTCCCTaGCACAGAGAGACCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNSLYNALHGCHFEAPGFRYSSP*HRETMS Trigger: GCTCATGGTCTCTCTGTGCAAGGGAGAGCTGTACCG...AAAACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAACTCCCTCTACAATGCCCTCCATGGGTGTCACTTTGAAGCCCCAGGTTCCCGCAATGATGCATTaGTCCAGATGTGAGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TKTPSTMPSMGVTLKPQVPAMMH*SRCEPK Trigger: CTTGGGCTCACATCTGGACAAATGCATCATTGCGGG...AACCTGGGGCTTCAAAGTGACACCCATGGAGGGCATTGTAGAGGGAGTTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060196.3 |
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| CDS-3UTR CAA 90 bp | TCTCTTTTCATTTTCTGCTTTCCCTTAAGGCCAGGAGATCAGCAGCTACCACCTCGGTACAGCTCTCCCTaGCACAGAGAGACCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLFIFCFPLRPGDQQLPPRYSSP*HRETMS Trigger: GCTCATGGTCTCTCTGTGCAAGGGAGAGCTGTACCG...AGGTGGTAGCTGCTGATCTCCTGGCCTTAAGGGAAAGCAGAAAATGAAAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109872.2 |
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| CDS GCA 72 bp | TTCTCCACACCCATCCTGGGTGGCGCCACGGGGCCCTaGGAGGCCGCTCTCCTTGGAACCTGGGGACCATTG | + |
|
Preference number: 6 (lower is better) Translates to: FSTPILGGATGP*EAALLGTWGPL Trigger: CAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCAGGATGGGTGTGGAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CCA 72 bp | CCTCAGAGAAGAAGCAGGCATTCTCCACACCCATCCTaGGTGGCGCCACGGGGCCCTGCGAGGCCGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PQRRSRHSPHPS*VAPRGPARPLS Trigger: GGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCAGGATGGGTGTGGAGAATGCCTGCTTCTTCTCTGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CCA 72 bp | AGAGAAGAAGCAGGCATTCTCCACACCCATCCTGGGTaGCGCCACGGGGCCCTGCGAGGCCGCTCTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: REEAGILHTHPG*RHGALRGRSPW Trigger: CCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCAGGATGGGTGTGGAGAATGCCTGCTTCTTCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CAA 90 bp | CACCCATCCTGGGTGGCGCCACGGGGCCCTGCGAGGCCGCTCTCCTaGGAACCTGGGGACCATTGCTCAATGTCTTCAGTTCCAGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPSWVAPRGPARPLS*EPGDHCSMSSVPDQ Trigger: CTGGTCTGGAACTGAAGACATTGAGCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCAGGATGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CAA 72 bp | TGGGTGGCGCCACGGGGCCCTGCGAGGCCGCTCTCCTaGGAACCTGGGGACCATTGCTCAATGTCTTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: WVAPRGPARPLS*EPGDHCSMSSV Trigger: AACTGAAGACATTGAGCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGCGCCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS TCA 72 bp | CGGGCGGCTCACAGGTTCCAGGCCTGGTCCCTCCTCTaGATGCAAAGAAAGATCATCCCGCTGGGACCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RAAHRFQAWSLL*MQRKIIPLGPG Trigger: TCCCGGTCCCAGCGGGATGATCTTTCTTTGCATTCAGAGGAGGGACCAGGCCTGGAACCTGTGAGCCGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS TCA 72 bp | GGCGTTCCATCTCCCTTGCTGTCACTGTGTCAGGGTTaGCCCGGGCCTCTCGGGGGATGGCGTATGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GVPSPLLSLCQG*PGPLGGWRMLS Trigger: TGACAGCATACGCCATCCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGACAGCAAGGGAGATGGAACGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS GCA 72 bp | GTCAGGGTTGACCCGGGCCTCTCGGGGGATGGCGTATaGTGTCACCACCAGGAGGATTCCGCTCACCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VRVDPGLSGDGV*CHHQEDSAHQE Trigger: TTCTTGGTGAGCGGAATCCTCCTGGTGGTGACAGCATACGCCATCCCCCGAGAGGCCCGGGTCAACCCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS GCA 72 bp | GCGGGCGTAGTACATCTCCAGGCGTTCCATCTCCCTTaGTGTCACTGTGTCAGGGTTGACCCGGGCCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGVVHLQAFHLP*CHCVRVDPGLS Trigger: CGAGAGGCCCGGGTCAACCCTGACACAGTGACAGCAAGGGAGATGGAACGCCTGGAGATGTACTACGCCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CCA 72 bp | GCCACGGGGCCCTGCGAGGCCGCTCTCCTTGGAACCTaGGGACCATTGCTCAATGTCTTCAGTTCCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: ATGPCEAALLGT*GPLLNVFSSRP Trigger: TGGTCTGGAACTGAAGACATTGAGCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCTCGCAGGGCCCCGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CAA 72 bp | AGGCGTTCCATCTCCCTTGCTGTCACTGTGTCAGGGTaGACCCGGGCCTCTCGGGGGATGGCGTATGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRSISLAVTVSG*TRASRGMAYAV Trigger: GACAGCATACGCCATCCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGACAGCAAGGGAGATGGAACGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CAA 90 bp | TACATCTCCAGGCGTTCCATCTCCCTTGCTGTCACTGTGTCAGGGTaGACCCGGGCCTCTCGGGGGATGGCGTATGCTGTCACCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: YISRRSISLAVTVSG*TRASRGMAYAVTTR Trigger: CCTGGTGGTGACAGCATACGCCATCCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGACAGCAAGGGAGATGGAACGCCTGGAGATGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CAA 90 bp | GATCCCCTGCCGGGGACAAAGGTCTGTCTGCGGTACAGCTCTCCCTaGCACAGAGAGACCATGAGCAGCACAGAGAGGAGCATGCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: DPLPGTKVCLRYSSP*HRETMSSTERSMPP Trigger: GGGTGGCATGCTCCTCTCTGTGCTGCTCATGGTCTCTCTGTGCAAGGGAGAGCTGTACCGCAGACAGACCTTTGTCCCCGGCAGGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CCA 72 bp | GGTCCCTCCTCTGAATGCAAAGAAAGATCATCCCGCTaGGACCGGGACAGTGAGGGGACACCTCCAGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPSSECKERSSR*DRDSEGTPPGG Trigger: TCCCCCTGGAGGTGTCCCCTCACTGTCCCGGTCCCAGCGGGATGATCTTTCTTTGCATTCAGAGGAGGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS TCA 72 bp | CAGCCCGAGGCCCGCAATGATGCATTTGTCCAGATGTaGGCCCAAGCGGGCGTAGTACATCTCCAGGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QPEARNDAFVQM*AQAGVVHLQAF Trigger: GAACGCCTGGAGATGTACTACGCCCGCTTGGGCTCACATCTGGACAAATGCATCATTGCGGGCCTCGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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| CDS CAA 72 bp | CCGGGGACAAAGGTCTGTCTGCGGTACAGCTCTCCCTaGCACAGAGAGACCATGAGCAGCACAGAGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGTKVCLRYSSP*HRETMSSTERS Trigger: GCTCCTCTCTGTGCTGCTCATGGTCTCTCTGTGCAAGGGAGAGCTGTACCGCAGACAGACCTTTGTCCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060196.3 ENSMUST00000109872.2 |
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