Pregenerated sensors for TMEM71 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036944Ensembl transcript IDs: ENSMUST00000048372.7
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGAAGTTCATTATATTTGGGACAATGAGGAAACATTACTCCAGGTaGTCTGTCCTCTGTTACTTTTTCCTATCCCTTCTCTTTCAACTG | + |
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Preference number: 1 (lower is better) Translates to: LKFIIFGTMRKHYSR*SVLCYFFLSLLFQL Trigger: CAGTTGAAAGAGAAGGGATAGGAAAAAGTAACAGAGGACAGACCACCTGGAGTAATGTTTCCTCATTGTCCCAAATATAATGAACTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR-3UTR TCA 90 bp | GACTCAAAGTTTAAGAGGATACAGCTCATGACAGGCAGACAAGGAGCCAGAACCGACAGACTGAGGGACTaGCCATTTACACATTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: DSKFKRIQLMTGRQGARTDRLRD*PFTHSE Trigger: TTCAGAATGTGTAAATGGTCAGTCCCTCAGTCTGTC...GGTTCTGGCTCCTTGTCTGCCTGTCATGAGCTGTATCCTCTTAAACTTTGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR-3UTR GCA 90 bp | AATACCCGAGGCAGAACACTGAGTGATGAAAAGGAATTCCATTGGCGCACAGTTTTAGCAAGGCATAGCTaGATGATGGCAGACATGCTA | + |
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Preference number: 2 (lower is better) Translates to: NTRGRTLSDEKEFHWRTVLARHS*MMADML Trigger: TAGCATGTCTGCCATCATGCAGCTATGCCTTGCTAA...AACTGTGCGCCAATGGAATTCCTTTTCATCACTCAGTGTTCTGCCTCGGGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAAAGATGAATGCTGGTGCTCTCTTGTTCCCTCCGTCGTTTTTATTCTGGAAAAGGAATTCCATTaGCGCACAGTTCTGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: REKDECWCSLVPSVVFILEKEFH*RTVLQV Trigger: AACCTGCAGAACTGTGCGCCAATGGAATTCCTTTTC...CAGAATAAAAACGACGGAGGGAACAAGAGAGCACCAGCATTCATCTTTCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGAGTAGGTCTTCTTCCTTCAACCTCTCTAGAAACAACTATGTAGACATACCCGAGGCAGAACACTaGGTGATGAAAAGGAATTCC | + |
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Preference number: 2 (lower is better) Translates to: VQSRSSSFNLSRNNYVDIPEAEH*VMKRNS Trigger: GGAATTCCTTTTCATCACTCAGTGTTCTGCCTCGGG...TATGTCTACATAGTTGTTTCTAGAGAGGTTGAAGGAAGAAGACCTACTCTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGAAAGATGAATGCTGGTGCTCTCTTGTTCCCTCCGTCGTTTTTATTCTGTCTATACATAGACATTaGTCAGCATGGAGCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: REKDECWCSLVPSVVFILSIHRH*SAWSIL Trigger: GAGGATGCTCCATGCTGAGCAATGTCTATGTATAGA...CAGAATAAAAACGACGGAGGGAACAAGAGAGCACCAGCATTCATCTTTCTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR-3UTR CCA 90 bp | GATAGCATCACATCACATCACATGATGGACATGGGAGGAAGTGATCATATAGCTCAACACATGGACATCTaGAGACAAACAATAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: DSITSHHMMDMGGSDHIAQHMDI*RQTIAP Trigger: AGGTGCTATTGTTTGTCTCCAGATGTCCATGTGTTG...AGCTATATGATCACTTCCTCCCATGTCCATCATGTGATGTGATGTGATGCTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR-3UTR TCA 90 bp | CATTGGCGCACAGTTCTGCAGGTTCCTATGCATAGTGACAACATATTCTTCATTACCATTTACACATTCTaGATGAAGTTCCCTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: HWRTVLQVPMHSDNIFFITIYTF*MKFPQM Trigger: CATCTGAGGGAACTTCATTCAGAATGTGTAAATGGT...AATGAAGAATATGTTGTCACTATGCATAGGAACCTGCAGAACTGTGCGCCAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGAGTAGGTCTTCTTCCTTCAACCTCTCTAGAAACAACTATGTAGACATAGAAAGTTTCAACACATaGACATCTGGAGACAAACAA | + |
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Preference number: 2 (lower is better) Translates to: VQSRSSSFNLSRNNYVDIESFNT*TSGDKQ Trigger: TTGTTTGTCTCCAGATGTCCATGTGTTGAAACTTTC...TATGTCTACATAGTTGTTTCTAGAGAGGTTGAAGGAAGAAGACCTACTCTGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR CCA 72 bp | CGAGGCAGAACACTGAGTGATGAAAAGGAATTCCATTaGCGCACAGTTCTGCAGGTTCCTATGCATAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: RGRTLSDEKEFH*RTVLQVPMHSD Trigger: GTCACTATGCATAGGAACCTGCAGAACTGTGCGCCAATGGAATTCCTTTTCATCACTCAGTGTTCTGCCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR TCA 72 bp | CATCACATCACATCACATGATGGACATGGGAGGAAGTaGTCATATAGCTGGACAGAAAGCCAGAGACAGACT | + |
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Preference number: 3 (lower is better) Translates to: HHITSHDGHGRK*SYSWTESQRQT Trigger: AGTCTGTCTCTGGCTTTCTGTCCAGCTATATGATCACTTCCTCCCATGTCCATCATGTGATGTGATGTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR CCA 72 bp | CTGAATGAAGTTCCCTCAGATGTAAGGATATCCCACTaGCCCGATTTCTTAAAAGTCCTACCACCTCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: LNEVPSDVRISH*PDFLKVLPPLN Trigger: GTTAAGAGGTGGTAGGACTTTTAAGAAATCGGGCCAGTGGGATATCCTTACATCTGAGGGAACTTCATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR CCA 72 bp | AGGCATAGCTGCATGATGGCAGACATGCTATACCCATaGTCCAGGCCTCTCACAAATTCTCTAATTAAAATA | + |
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Preference number: 3 (lower is better) Translates to: RHSCMMADMLYP*SRPLTNSLIKI Trigger: TATTTTAATTAGAGAATTTGTGAGAGGCCTGGACCATGGGTATAGCATGTCTGCCATCATGCAGCTATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR CCA 72 bp | ATTATATTTGGGACAATGAGGAAACATTACTCCAGGTaGTCTGTCCTCTGTTACTTTTTCCTATCCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: IIFGTMRKHYSR*SVLCYFFLSLL Trigger: GAGAAGGGATAGGAAAAAGTAACAGAGGACAGACCACCTGGAGTAATGTTTCCTCATTGTCCCAAATATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR TCA 72 bp | ATTGCTCAGCATGGAGCATCCTCAACAGGTTATATCTaGAAGTTCTTGGTAAGAGGTAAGAATACTGAATAT | + |
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Preference number: 3 (lower is better) Translates to: IAQHGASSTGYI*KFLVRGKNTEY Trigger: ATATTCAGTATTCTTACCTCTTACCAAGAACTTTCAGATATAACCTGTTGAGGATGCTCCATGCTGAGCAAT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR GCA 90 bp | AGAGAGAAAGATGAATGCTGGTGCTCTCTTGTTCCCTCCGTCGTTTTTATTCTGGGAGTCGGGGGCTTCTaGGGCAGATATAGTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: REKDECWCSLVPSVVFILGVGGF*GRYSGS Trigger: GCTCCCACTATATCTGCCGCAGAAGCCCCCGACTCC...CAGAATAAAAACGACGGAGGGAACAAGAGAGCACCAGCATTCATCTTTCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR CCA 90 bp | GACTCAAAGTTTAAGAGGATACAGCTCATGACAGGCAGACAAGGAGCCAGAACCGTCCTTCGTCTGACCTaGAGTCATTTGCTACTGGTG | + |
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Preference number: 4 (lower is better) Translates to: DSKFKRIQLMTGRQGARTVLRLT*SHLLLV Trigger: CACCAGTAGCAAATGACTCCAGGTCAGACGAAGGAC...GGTTCTGGCTCCTTGTCTGCCTGTCATGAGCTGTATCCTCTTAAACTTTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR TCA 90 bp | GACTCAAAGTTTAAGAGGATACAGCTCATGACAGGCAGACAAGGAGCCAGAACCAGAAGAGGAGGATTCTaGAGTGTCTGTGACTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: DSKFKRIQLMTGRQGARTRRGGF*SVCDWL Trigger: AAGCCAGTCACAGACACTTCAGAATCCTCCTCTTCT...GGTTCTGGCTCCTTGTCTGCCTGTCATGAGCTGTATCCTCTTAAACTTTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR TCA 90 bp | AGGCATAGCTGCATGATGGCAGACATGCTATACCCATGGTCCAGGCCTCTCACAAAACCAGCTCTTGAATaGTCCAAACTGTTCTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: RHSCMMADMLYPWSRPLTKPALE*SKLFFS Trigger: CGAAAAGAACAGTTTGGATCATTCAAGAGCTGGTTT...TGTGAGAGGCCTGGACCATGGGTATAGCATGTCTGCCATCATGCAGCTATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR TCA 90 bp | CTTCATTCTAGTGATAGTTTCAAGGCAGATAGCATCACATCACATCACATGATGTGTAGTAGCCATTGGTaGGGAGTCGGGGGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LHSSDSFKADSITSHHMMCSSHW*GVGGFC Trigger: GCAGAAGCCCCCGACTCCTCACCAATGGCTACTACA...CATCATGTGATGTGATGTGATGCTATCTGCCTTGAAACTATCACTAGAATGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR TCA 90 bp | ATGGCAGACATGCTATACCCATGGTCCAGGCCTCTCACAAATTCTCTAATTAAAAGAAGGTCCTTCGTCTaGCCTGGAGTCATTTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: MADMLYPWSRPLTNSLIKRRSFV*PGVICY Trigger: GTAGCAAATGACTCCAGGTCAGACGAAGGACCTTCT...TTTAATTAGAGAATTTGTGAGAGGCCTGGACCATGGGTATAGCATGTCTGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR TCA 90 bp | ATTCCAAGAAGGCTACAAATTACTGTTCCCAGGTATTCAAAGCGAAGACATTCATCTGTGACTGGCTTCTaGGACTCCCAGCCATCACTC | + |
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Preference number: 4 (lower is better) Translates to: IPRRLQITVPRYSKRRHSSVTGF*DSQPSL Trigger: GAGTGATGGCTGGGAGTCTCAGAAGCCAGTCACAGA...TGAATGTCTTCGCTTTGAATACCTGGGAACAGTAATTTGTAGCCTTCTTGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR TCA 90 bp | CATTGGCGCACAGTTCTGCAGGTTCCTATGCATAGTGACAACATATTCTTCATTATTCTGAAGTGTCTGTaGCTGGCTTCTGAGACTCCC | + |
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Preference number: 4 (lower is better) Translates to: HWRTVLQVPMHSDNIFFIILKCL*LASETP Trigger: GGGAGTCTCAGAAGCCAGTCACAGACACTTCAGAAT...AATGAAGAATATGTTGTCACTATGCATAGGAACCTGCAGAACTGTGCGCCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR TCA 90 bp | ATGGCAGACATGCTATACCCATGGTCCAGGCCTCTCACAAATTCTCTAATTAAATTTGGGAGCTTTCTCTaGGAGACTGAGGCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: MADMLYPWSRPLTNSLIKFGSFL*ETEAGC Trigger: ACATCCTGCCTCAGTCTCTCAGAGAAAGCTCCCAAA...TTTAATTAGAGAATTTGTGAGAGGCCTGGACCATGGGTATAGCATGTCTGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR CCA 90 bp | CATTGGCGCACAGTTCTGCAGGTTCCTATGCATAGTGACAACATATTCTTCATTGTCACAAGTAAAGCTTaGGAAAAGGCATGTCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HWRTVLQVPMHSDNIFFIVTSKA*EKACRR Trigger: TCTCCGACATGCCTTTTCCCAAGCTTTACTTGTGAC...AATGAAGAATATGTTGTCACTATGCATAGGAACCTGCAGAACTGTGCGCCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR TCA 90 bp | ATTGGCGCACAGTTCTGCAGGTTCCTATGCATAGTGACAACATATTCTTCATTCAATAGCGGGCAAGGTTaGGAAACAGTGATTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: IGAQFCRFLCIVTTYSSFNSGQG*ETVISQ Trigger: TTGTGAAATCACTGTTTCTCAACCTTGCCCGCTATT...GAATGAAGAATATGTTGTCACTATGCATAGGAACCTGCAGAACTGTGCGCCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR CCA 90 bp | CTTCATTCTAGTGATAGTTTCAAGGCAGATAGCATCACATCACATCACATGATGCTGTCAGGGGGTCTATaGAGCAGCATTCAAAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LHSSDSFKADSITSHHMMLSGGL*SSIQKN Trigger: GTTCTTTTGAATGCTGCTCCATAGACCCCCTGACAG...CATCATGTGATGTGATGTGATGCTATCTGCCTTGAAACTATCACTAGAATGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR TCA 90 bp | CTTCATTCTAGTGATAGTTTCAAGGCAGATAGCATCACATCACATCACATGATGTTGTGTATGCAGAAATaGCTAAGCACACTGCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: LHSSDSFKADSITSHHMMLCMQK*LSTLLG Trigger: TCCTAGCAGTGTGCTTAGTCATTTCTGCATACACAA...CATCATGTGATGTGATGTGATGCTATCTGCCTTGAAACTATCACTAGAATGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| 3UTR CAA 72 bp | TTCTTAAAAGTCCTACCACCTCTTAACATTGCCACATaGACAATGAAAGTTTCAACACATGGACATCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLKVLPPLNIAT*TMKVSTHGHLE Trigger: CTCCAGATGTCCATGTGTTGAAACTTTCATTGTCAATGTGGCAATGTTAAGAGGTGGTAGGACTTTTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 90 bp | GGTCACAGAAGAAACTGTCCTCAGTCCAAATGTAGTAGCCATTGGTaGGGAGTCGGGGGCTTCTGCGGCAGATATAGTGGGAGCCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: GHRRNCPQSKCSSHW*GVGGFCGRYSGSLS Trigger: TGACAGGCTCCCACTATATCTGCCGCAGAAGCCCCCGACTCCTCACCAATGGCTACTACATTTGGACTGAGGACAGTTTCTTCTGTGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 90 bp | TGGGAAAAGGCATGTCGGAGACAGCTTTCCAGAAGGTCCTTCGTCTaGCCTGGAGTCATTTGCTACTGGTGTCGACATCAGTGGAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: WEKACRRQLSRRSFV*PGVICYWCRHQWRV Trigger: GACTCTCCACTGATGTCGACACCAGTAGCAAATGACTCCAGGTCAGACGAAGGACCTTCTGGAAAGCTGTCTCCGACATGCCTTTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS CCA 90 bp | AAAGGCATGTCGGAGACAGCTTTCCAGAAGGTCCTTCGTCTGACCTaGAGTCATTTGCTACTGGTGTCGACATCAGTGGAGAGTCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: KGMSETAFQKVLRLT*SHLLLVSTSVESLG Trigger: ACCGAGACTCTCCACTGATGTCGACACCAGTAGCAAATGACTCCAGGTCAGACGAAGGACCTTCTGGAAAGCTGTCTCCGACATGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 90 bp | CTAAGTTCTCCTTGTACATCACACTGGTTTGGGAGGGGTTCAGTGTaGTGTGGCCATCTGGGTCACAGAAGAAACTGTCCTCAGTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LSSPCTSHWFGRGSV*CGHLGHRRNCPQSK Trigger: TTTGGACTGAGGACAGTTTCTTCTGTGACCCAGATGGCCACATCACACTGAACCCCTCCCAAACCAGTGTGATGTACAAGGAGAACTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 90 bp | TCCAAGGCTCCTGATTCCATCCAGCCAGAGATCCTCACTTGGGAGTaGGTCAACTTCTCCAAAGATACTTCCATGCAGCCAAGACTTAGA | + |
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Preference number: 5 (lower is better) Translates to: SKAPDSIQPEILTWE*VNFSKDTSMQPRLR Trigger: TCTAAGTCTTGGCTGCATGGAAGTATCTTTGGAGAAGTTGACTCACTCCCAAGTGAGGATCTCTGGCTGGATGGAATCAGGAGCCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS GCA 90 bp | AGATCCTCACTTGGGAGTGAGTCAACTTCTCCAAAGATACTTCCATaGAGCCAAGACTTAGAGGCTCGGGGGTCCAAGAGAGAAGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: RSSLGSESTSPKILP*SQDLEARGSKREER Trigger: TCTTTCTTCTCTCTTGGACCCCCGAGCCTCTAAGTCTTGGCTGCATGGAAGTATCTTTGGAGAAGTTGACTCACTCCCAAGTGAGGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS CCA 90 bp | GTACATCACACTGGTTTGGGAGGGGTTCAGTGTGATGTGGCCATCTaGGTCACAGAAGAAACTGTCCTCAGTCCAAATGTAGTAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: VHHTGLGGVQCDVAI*VTEETVLSPNVVAI Trigger: AATGGCTACTACATTTGGACTGAGGACAGTTTCTTCTGTGACCCAGATGGCCACATCACACTGAACCCCTCCCAAACCAGTGTGATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 90 bp | ATGCTTTCACCTGAAGTTGAAGAGAGGAACTTTGGGAGCTTTCTCTaGGAGACTGAGGCAGGATGTAGCCAGAAGAGGAGGATTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: MLSPEVEERNFGSFL*ETEAGCSQKRRILK Trigger: CTTCAGAATCCTCCTCTTCTGGCTACATCCTGCCTCAGTCTCTCAGAGAAAGCTCCCAAAGTTCCTCTCTTCAACTTCAGGTGAAAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS CCA 90 bp | GCATTCAAAAGAACTGTCTCCATCCAGGAAGTCACAAGTAAAGCTTaGGAAAAGGCATGTCGGAGACAGCTTTCCAGAAGGTCCTTCGTC | + |
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Preference number: 5 (lower is better) Translates to: AFKRTVSIQEVTSKA*EKACRRQLSRRSFV Trigger: GACGAAGGACCTTCTGGAAAGCTGTCTCCGACATGCCTTTTCCCAAGCTTTACTTGTGACTTCCTGGATGGAGACAGTTCTTTTGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 90 bp | TGCTGGCTAATTCTCCTCCCACAAACCACCTTGTGTATGCAGAAATaGCTAAGCACACTGCTAGGAGGATTGCCTGAAAGGAGACCTTAT | + |
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Preference number: 5 (lower is better) Translates to: CWLILLPQTTLCMQK*LSTLLGGLPERRPY Trigger: ATAAGGTCTCCTTTCAGGCAATCCTCCTAGCAGTGTGCTTAGTCATTTCTGCATACACAAGGTGGTTTGTGGGAGGAGAATTAGCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR CAA 90 bp | CATTGGCGCACAGTTCTGCAGGTTCCTATGCATAGTGACAACATATTCTTCATTGCCAGAGATCCTCACTaGGGAGTGAGTCAACTTCTC | + |
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Preference number: 5 (lower is better) Translates to: HWRTVLQVPMHSDNIFFIARDPH*GVSQLL Trigger: GAGAAGTTGACTCACTCCCAAGTGAGGATCTCTGGC...AATGAAGAATATGTTGTCACTATGCATAGGAACCTGCAGAACTGTGCGCCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS-3UTR CAA 90 bp | ATTGGCGCACAGTTCTGCAGGTTCCTATGCATAGTGACAACATATTCTTCATTCACACTGCTAGGAGGATaGCCTGAAAGGAGACCTTAT | + |
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Preference number: 5 (lower is better) Translates to: IGAQFCRFLCIVTTYSSFTLLGG*PERRPY Trigger: ATAAGGTCTCCTTTCAGGCAATCCTCCTAGCAGTGT...GAATGAAGAATATGTTGTCACTATGCATAGGAACCTGCAGAACTGTGCGCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 90 bp | AGCACAGGAGGTGGCTTTGAAATAGCGGGCAAGGTTGAGAAACAGTaGTTTCACAACATAAGCTATTGTGATCAGCAATGCACATGTAAA | + |
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Preference number: 5 (lower is better) Translates to: STGGGFEIAGKVEKQ*FHNISYCDQQCTCK Trigger: TTTACATGTGCATTGCTGATCACAATAGCTTATGTTGTGAAATCACTGTTTCTCAACCTTGCCCGCTATTTCAAAGCCACCTCCTGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 72 bp | AGACTGAGGCAGGATGTAGCCAGAAGAGGAGGATTCTaGAGTGTCTGTGACTGGCTTCTGAGACTCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RLRQDVARRGGF*SVCDWLLRLPA Trigger: GGCTGGGAGTCTCAGAAGCCAGTCACAGACACTTCAGAATCCTCCTCTTCTGGCTACATCCTGCCTCAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 72 bp | AGAAACTGTCCTCAGTCCAAATGTAGTAGCCATTGGTaGGGAGTCGGGGGCTTCTGCGGCAGATATAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RNCPQSKCSSHW*GVGGFCGRYSG Trigger: CCCACTATATCTGCCGCAGAAGCCCCCGACTCCTCACCAATGGCTACTACATTTGGACTGAGGACAGTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS CCA 72 bp | TACATCACACTGGTTTGGGAGGGGTTCAGTGTGATGTaGCCATCTGGGTCACAGAAGAAACTGTCCTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: YITLVWEGFSVM*PSGSQKKLSSV Trigger: GACTGAGGACAGTTTCTTCTGTGACCCAGATGGCCACATCACACTGAACCCCTCCCAAACCAGTGTGATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 72 bp | GAAGAGGAGGATTCTGAAGTGTCTGTGACTGGCTTCTaGGACTCCCAGCCATCACTCAGAGAACAGTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: EEEDSEVSVTGF*DSQPSLREQSR Trigger: TCTAGACTGTTCTCTGAGTGATGGCTGGGAGTCTCAGAAGCCAGTCACAGACACTTCAGAATCCTCCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 72 bp | ATTCTCCTCCCACAAACCACCTTGTGTATGCAGAAATaGCTAAGCACACTGCTAGGAGGATTGCCTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: ILLPQTTLCMQK*LSTLLGGLPER Trigger: CCTTTCAGGCAATCCTCCTAGCAGTGTGCTTAGTCATTTCTGCATACACAAGGTGGTTTGTGGGAGGAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS CCA 72 bp | ATTCTAACTAAGTTCTCCTTGTACATCACACTGGTTTaGGAGGGGTTCAGTGTGATGTGGCCATCTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ILTKFSLYITLV*EGFSVMWPSGS Trigger: TGACCCAGATGGCCACATCACACTGAACCCCTCCCAAACCAGTGTGATGTACAAGGAGAACTTAGTTAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS CAA 90 bp | CTAGGAGGATTGCCTGAAAGGAGACCTTATGCATCAAACCAGCTCTaGAATGATCCAAACTGTTCTTTTCGAAGTGCCCTGATGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LGGLPERRPYASNQL*NDPNCSFRSALMLS Trigger: TGAAAGCATCAGGGCACTTCGAAAAGAACAGTTTGGATCATTCAAGAGCTGGTTTGATGCATAAGGTCTCCTTTCAGGCAATCCTCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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| CDS TCA 72 bp | GGTGGCTTTGAAATAGCGGGCAAGGTTGAGAAACAGTaGTTTCACAACATAAGCTATTGTGATCAGCAATGC | + |
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Preference number: 6 (lower is better) Translates to: GGFEIAGKVEKQ*FHNISYCDQQC Trigger: GCATTGCTGATCACAATAGCTTATGTTGTGAAATCACTGTTTCTCAACCTTGCCCGCTATTTCAAAGCCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048372.7 |
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