Pregenerated sensors for TMEM70 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025940Ensembl transcript IDs: ENSMUST00000065373.6, ENSMUST00000177501.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGAGGGCATCAGATCCCCTCATGGTTGTGAGCCACCATGTGGTTaGTGGGAACTGAACTCAGGACCTCTGGAAGAACAGCCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: EEGIRSPHGCEPPCG*WELNSGPLEEQPVL Trigger: GAGCACTGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATGAGGGGATCTGATGCCCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR TCA 90 bp | ACTGAACTCAGGACCTCTGGAAGAACAGCCAGTGCTCTTAACCACTaGGCCACCGCTCCGGTTCTGATGTACCGCCATACATGGCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: TELRTSGRTASALNH*ATAPVLMYRHTWLR Trigger: TCTGAGCCATGTATGGCGGTACATCAGAACCGGAGCGGTGGCTCAGTGGTTAAGAGCACTGGCTGTTCTTCCAGAGGTCCTGAGTTCAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR CCA 90 bp | GAGGGCATCAGATCCCCTCATGGTTGTGAGCCACCATGTGGTTGCTaGGAACTGAACTCAGGACCTCTGGAAGAACAGCCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: EGIRSPHGCEPPCGC*ELNSGPLEEQPVLL Trigger: TAAGAGCACTGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATGAGGGGATCTGATGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR CCA 90 bp | CACCGCTCCGGTTCTGATGTACCGCCATACATGGCTCAGATGTGGTaGCACACACAGAAGCAGATAGATTTCTATGAATTCAAGGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: HRSGSDVPPYMAQMW*HTQKQIDFYEFKVR Trigger: TCTGACCTTGAATTCATAGAAATCTATCTGCTTCTGTGTGTGCCACCACATCTGAGCCATGTATGGCGGTACATCAGAACCGGAGCGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR TCA 90 bp | CATGGCTCAGATGTGGTGGCACACACAGAAGCAGATAGATTTCTATaGATTCAAGGTCAGACTGGTCTACATAGTAAGATTCTGTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: HGSDVVAHTEADRFL*IQGQTGLHSKILSK Trigger: TTTAGACAGAATCTTACTATGTAGACCAGTCTGACCTTGAATTCATAGAAATCTATCTGCTTCTGTGTGTGCCACCACATCTGAGCCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCTGGAAGAACAGCCAAGCATCCTGCTTCTATaGAGGCCAATTCTAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: EPPCGCWELNSGPLEEQPSILLL*RPILGP Trigger: AGGCCCTAGAATTGGCCTTCATAGAAGCAGGATGCT...TGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCTGGAAGAACAGCCACGCTGTCCCATGTGCTaGGATTCTAAGTGTACAAAA | + |
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Preference number: 2 (lower is better) Translates to: EPPCGCWELNSGPLEEQPRCPMC*DSKCTK Trigger: TTTTGTACACTTAGAATCCCAGCACATGGGACAGCG...TGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR-3UTR GCA 90 bp | TGTACCGCCATACATGGCTCAGATGTGGTGGCACACACAGAAGCAGATAGATTTAAACACAGTGCCAATTaGTGTGTCCTCAGCCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: CTAIHGSDVVAHTEADRFKHSAN*CVLSPY Trigger: GTAAGGGCTGAGGACACAGCAATTGGCACTGTGTTT...AAATCTATCTGCTTCTGTGTGTGCCACCACATCTGAGCCATGTATGGCGGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR-3UTR CCA 90 bp | TGTACCGCCATACATGGCTCAGATGTGGTGGCACACACAGAAGCAGATAGATTTCGCTGTCCCATGTGCTaGGATTCTAAGTGTACAAAA | + |
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Preference number: 2 (lower is better) Translates to: CTAIHGSDVVAHTEADRFRCPMC*DSKCTK Trigger: TTTTGTACACTTAGAATCCCAGCACATGGGACAGCG...AAATCTATCTGCTTCTGTGTGTGCCACCACATCTGAGCCATGTATGGCGGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATGTGGTGGCACACACAGAAGCAGATAGATTTCTATGAATTCAAGGTCAGACTACATTACCAAGGATaGCCTCAGATTTCTAATCTT | + |
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Preference number: 2 (lower is better) Translates to: QMWWHTQKQIDFYEFKVRLHYQG*PQISNL Trigger: AAGATTAGAAATCTGAGGTCATCCTTGGTAATGTAG...TCTGACCTTGAATTCATAGAAATCTATCTGCTTCTGTGTGTGCCACCACATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR-3UTR TCA 90 bp | ACATACTGGGTAATGGTGGCATGCCTTAATTTATTTAAGGCCTTAATCCTTTATCTACATTACCAAGGATaGCCTCAGATTTCTAATCTT | + |
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Preference number: 2 (lower is better) Translates to: TYWVMVACLNLFKALILYLHYQG*PQISNL Trigger: AAGATTAGAAATCTGAGGTCATCCTTGGTAATGTAG...ATAAAGGATTAAGGCCTTAAATAAATTAAGGCATGCCACCATTACCCAGTATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065373.6 |
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| 3UTR TCA 72 bp | AGGACCTCTGGAAGAACAGCCAGTGCTCTTAACCACTaGGCCACCGCTCCGGTTCTGATGTACCGCCATACA | + |
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Preference number: 3 (lower is better) Translates to: RTSGRTASALNH*ATAPVLMYRHT Trigger: TGTATGGCGGTACATCAGAACCGGAGCGGTGGCTCAGTGGTTAAGAGCACTGGCTGTTCTTCCAGAGGTCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR TCA 72 bp | CACACGAGAAGAGGGCATCAGATCCCCTCATGGTTGTaGGCCACCATGTGGTTGCTGGGAACTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: HTRRGHQIPSWL*ATMWLLGTELR Trigger: CCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATGAGGGGATCTGATGCCCTCTTCTCGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR TCA 72 bp | CTCATGGTTGTGAGCCACCATGTGGTTGCTGGGAACTaGACTCAGGACCTCTGGAAGAACAGCCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LMVVSHHVVAGN*TQDLWKNSQCS Trigger: AGAGCACTGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR CCA 72 bp | AGATCCCCTCATGGTTGTGAGCCACCATGTGGTTGCTaGGAACTGAACTCAGGACCTCTGGAAGAACAGCCA | + |
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Preference number: 3 (lower is better) Translates to: RSPHGCEPPCGC*ELNSGPLEEQP Trigger: TGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATGAGGGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR GCA 72 bp | ATCAGATCCCCTCATGGTTGTGAGCCACCATGTGGTTaGTGGGAACTGAACTCAGGACCTCTGGAAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: IRSPHGCEPPCG*WELNSGPLEEQ Trigger: CTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATGAGGGGATCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR TCA 72 bp | GATGTGGTGGCACACACAGAAGCAGATAGATTTCTATaGATTCAAGGTCAGACTGGTCTACATAGTAAGATT | + |
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Preference number: 3 (lower is better) Translates to: DVVAHTEADRFL*IQGQTGLHSKI Trigger: AATCTTACTATGTAGACCAGTCTGACCTTGAATTCATAGAAATCTATCTGCTTCTGTGTGTGCCACCACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| 3UTR CCA 72 bp | AAACAAACAAAAACCCAAAACCAAACAAACACATACTaGGTAATGGTGGCATGCCTTAATTTATTTAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: KQTKTQNQTNTY*VMVACLNLFKA Trigger: GGCCTTAAATAAATTAAGGCATGCCACCATTACCCAGTATGTGTTTGTTTGGTTTTGGGTTTTTGTTTGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065373.6 |
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| CDS-3UTR TCA 90 bp | CCAATTCTAGGGCCTCACATCAGCAAACACAGTGCCAATTGCTGTGTCCTCAGCCCTTTTGTAAGAAGGTaGAGCAGCGTGGGAGTGATC | + |
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Preference number: 4 (lower is better) Translates to: PILGPHISKHSANCCVLSPFVRR*SSVGVI Trigger: GATCACTCCCACGCTGCTTCACCTTCTTACAAAAGG...GCTGAGGACACAGCAATTGGCACTGTGTTTGCTGATGTGAGGCCCTAGAATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS-3UTR CCA 90 bp | GAGCCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCTGGAAGAACAGCCACAGCCTGCCATTTTCTaGCTTATCAACTTGTGTATG | + |
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Preference number: 4 (lower is better) Translates to: EPPCGCWELNSGPLEEQPQPAIF*LINLCM Trigger: CATACACAAGTTGATAAGCCAGAAAATGGCAGGCTG...TGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS-3UTR CCA 90 bp | GAGCCACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCTGGAAGAACAGCCATGTAAGTGTCACTTGTaGCTTCATGATACAACCGAA | + |
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Preference number: 4 (lower is better) Translates to: EPPCGCWELNSGPLEEQPCKCHL*LHDTTE Trigger: TTCGGTTGTATCATGAAGCCACAAGTGACACTTACA...TGGCTGTTCTTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGTGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS-3UTR GCA 90 bp | TGTACCGCCATACATGGCTCAGATGTGGTGGCACACACAGAAGCAGATAGATTTAAGGTACGGCAAGAATaGAAGGCTGACAACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: CTAIHGSDVVAHTEADRFKVRQE*KADNTC Trigger: ACAAGTGTTGTCAGCCTTGCATTCTTGCCGTACCTT...AAATCTATCTGCTTCTGTGTGTGCCACCACATCTGAGCCATGTATGGCGGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS-3UTR CCA 90 bp | CCAATTCTAGGGCCTCACATCAGCAAACACAGTGCCAATTGCTGTGTCCTCAGCTGTAAGTGTCACTTGTaGCTTCATGATACAACCGAA | + |
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Preference number: 4 (lower is better) Translates to: PILGPHISKHSANCCVLSCKCHL*LHDTTE Trigger: TTCGGTTGTATCATGAAGCCACAAGTGACACTTACA...GCTGAGGACACAGCAATTGGCACTGTGTTTGCTGATGTGAGGCCCTAGAATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS-3UTR TCA 90 bp | CAGATGTGGTGGCACACACAGAAGCAGATAGATTTCTATGAATTCAAGGTCAGACCTTTTGTAAGAAGGTaGAGCAGCGTGGGAGTGATC | + |
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Preference number: 4 (lower is better) Translates to: QMWWHTQKQIDFYEFKVRPFVRR*SSVGVI Trigger: GATCACTCCCACGCTGCTTCACCTTCTTACAAAAGG...TCTGACCTTGAATTCATAGAAATCTATCTGCTTCTGTGTGTGCCACCACATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS-3UTR GCA 90 bp | TGTACCGCCATACATGGCTCAGATGTGGTGGCACACACAGAAGCAGATAGATTTCAGTATAAATCAGCCTaGCATTTTCTGGCTTATCAA | + |
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Preference number: 4 (lower is better) Translates to: CTAIHGSDVVAHTEADRFQYKSA*HFLAYQ Trigger: TTGATAAGCCAGAAAATGGCAGGCTGATTTATACTG...AAATCTATCTGCTTCTGTGTGTGCCACCACATCTGAGCCATGTATGGCGGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS-3UTR GCA 90 bp | CAGATGTGGTGGCACACACAGAAGCAGATAGATTTCTATGAATTCAAGGTCAGAAAGGTACGGCAAGAATaGAAGGCTGACAACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: QMWWHTQKQIDFYEFKVRKVRQE*KADNTC Trigger: ACAAGTGTTGTCAGCCTTGCATTCTTGCCGTACCTT...TCTGACCTTGAATTCATAGAAATCTATCTGCTTCTGTGTGTGCCACCACATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS-3UTR CCA 90 bp | ACATACTGGGTAATGGTGGCATGCCTTAATTTATTTAAGGCCTTAATCCTTTATCAGCCTGCCATTTTCTaGCTTATCAACTTGTGTATG | + |
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Preference number: 4 (lower is better) Translates to: TYWVMVACLNLFKALILYQPAIF*LINLCM Trigger: CATACACAAGTTGATAAGCCAGAAAATGGCAGGCTG...ATAAAGGATTAAGGCCTTAAATAAATTAAGGCATGCCACCATTACCCAGTATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065373.6 |
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| CDS-3UTR GCA 90 bp | ACATACTGGGTAATGGTGGCATGCCTTAATTTATTTAAGGCCTTAATCCTTTATCAGTATAAATCAGCCTaGCATTTTCTGGCTTATCAA | + |
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Preference number: 4 (lower is better) Translates to: TYWVMVACLNLFKALILYQYKSA*HFLAYQ Trigger: TTGATAAGCCAGAAAATGGCAGGCTGATTTATACTG...ATAAAGGATTAAGGCCTTAAATAAATTAAGGCATGCCACCATTACCCAGTATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065373.6 |
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| CDS GCA 90 bp | TGCTGCGCTCGCCCGGGTGGCCCGCAAGACTCGGCTAGCGCTAGATaGCCGCCGCTCCGGAGCCGCTCTGGCTCGGCTAGCGAGGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: CCARPGGPQDSASAR*PPLRSRSGSASEAA Trigger: TGCGGCCTCGCTAGCCGAGCCAGAGCGGCTCCGGAGCGGCGGGCATCTAGCGCTAGCCGAGTCTTGCGGGCCACCCGGGCGAGCGCAGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177501.2 |
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| CDS GCA 90 bp | ATCTGCGCTCGCCCGGGTGGCCCGCAAGACTCGGCTAGCGCTAGATaGCCGCCGCTCCGGAGCCGCTCTGGCTCGGCTAGCGAGGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: ICARPGGPQDSASAR*PPLRSRSGSASEAA Trigger: TGCGGCCTCGCTAGCCGAGCCAGAGCGGCTCCGGAGCGGCGGGCATCTAGCGCTAGCCGAGTCTTGCGGGCCACCCGGGCGAGCGCAGAT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065373.6 |
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| CDS GCA 90 bp | GTATGGAAGCAGCGGACACATTGTTCCCAACAAACAGGTATCTGCTaGGCTCGCCCGGGTGGCCCGCAAGACTCGGCTAGCGCTAGATGC | + |
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Preference number: 5 (lower is better) Translates to: VWKQRTHCSQQTGIC*ARPGGPQDSASARC Trigger: GCATCTAGCGCTAGCCGAGTCTTGCGGGCCACCCGGGCGAGCGCAGCAGATACCTGTTTGTTGGGAACAATGTGTCCGCTGCTTCCATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177501.2 |
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| CDS GCA 90 bp | TGTGTATGGAAGCAGCGGACACATTGTTCCCAACAAACAGGTATCTaGGCTCGCCCGGGTGGCCCGCAAGACTCGGCTAGCGCTAGATGC | + |
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Preference number: 5 (lower is better) Translates to: CVWKQRTHCSQQTGI*ARPGGPQDSASARC Trigger: GCATCTAGCGCTAGCCGAGTCTTGCGGGCCACCCGGGCGAGCGCAGATACCTGTTTGTTGGGAACAATGTGTCCGCTGCTTCCATACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065373.6 |
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| CDS GCA 90 bp | TGTGTATGGAAGCAGCGGACACATTGTTCCCAACAAACAGGTATCTaGTGCGCTCGCCCGGGTGGCCCGCAAGACTCGGCTAGCGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: CVWKQRTHCSQQTGI*CARPGGPQDSASAR Trigger: TCTAGCGCTAGCCGAGTCTTGCGGGCCACCCGGGCGAGCGCAGCAGATACCTGTTTGTTGGGAACAATGTGTCCGCTGCTTCCATACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177501.2 |
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| CDS GCA 90 bp | TCACACCAAATATCGTTCGGGCCAGGTTTCCAGTATAAATCAGCCTaGCATTTTCTGGCTTATCAACTTGTGTATGGAAGCAGCGGACAC | + |
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Preference number: 5 (lower is better) Translates to: SHQISFGPGFQYKSA*HFLAYQLVYGSSGH Trigger: GTGTCCGCTGCTTCCATACACAAGTTGATAAGCCAGAAAATGGCAGGCTGATTTATACTGGAAACCTGGCCCGAACGATATTTGGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS CCA 90 bp | TATCGTTCGGGCCAGGTTTCCAGTATAAATCAGCCTGCCATTTTCTaGCTTATCAACTTGTGTATGGAAGCAGCGGACACATTGTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: YRSGQVSSINQPAIF*LINLCMEAADTLFP Trigger: TGGGAACAATGTGTCCGCTGCTTCCATACACAAGTTGATAAGCCAGAAAATGGCAGGCTGATTTATACTGGAAACCTGGCCCGAACGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS GCA 72 bp | CGCCCGGGTGGCCCGCAAGACTCGGCTAGCGCTAGATaGCCGCCGCTCCGGAGCCGCTCTGGCTCGGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: RPGGPQDSASAR*PPLRSRSGSAS Trigger: GCTAGCCGAGCCAGAGCGGCTCCGGAGCGGCGGGCATCTAGCGCTAGCCGAGTCTTGCGGGCCACCCGGGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS CAA 90 bp | GCCATTTTCTGGCTTATCAACTTGTGTATGGAAGCAGCGGACACATaGTTCCCAACAAACAGGTATCTGCGCTCGCCCGGGTGGCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: AIFWLINLCMEAADT*FPTNRYLRSPGWPA Trigger: TGCGGGCCACCCGGGCGAGCGCAGATACCTGTTTGTTGGGAACAATGTGTCCGCTGCTTCCATACACAAGTTGATAAGCCAGAAAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065373.6 |
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| CDS CAA 90 bp | GCCATTTTCTGGCTTATCAACTTGTGTATGGAAGCAGCGGACACATaGTTCCCAACAAACAGGTATCTGCTGCGCTCGCCCGGGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AIFWLINLCMEAADT*FPTNRYLLRSPGWP Trigger: GGGCCACCCGGGCGAGCGCAGCAGATACCTGTTTGTTGGGAACAATGTGTCCGCTGCTTCCATACACAAGTTGATAAGCCAGAAAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177501.2 |
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| CDS CAA 72 bp | TGGCTTATCAACTTGTGTATGGAAGCAGCGGACACATaGTTCCCAACAAACAGGTATCTGCGCTCGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: WLINLCMEAADT*FPTNRYLRSPG Trigger: CCCGGGCGAGCGCAGATACCTGTTTGTTGGGAACAATGTGTCCGCTGCTTCCATACACAAGTTGATAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065373.6 |
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| CDS CAA 72 bp | TGGCTTATCAACTTGTGTATGGAAGCAGCGGACACATaGTTCCCAACAAACAGGTATCTGCTGCGCTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: WLINLCMEAADT*FPTNRYLLRSP Trigger: GGGCGAGCGCAGCAGATACCTGTTTGTTGGGAACAATGTGTCCGCTGCTTCCATACACAAGTTGATAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177501.2 |
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| CDS CCA 72 bp | GGCCAGGTTTCCAGTATAAATCAGCCTGCCATTTTCTaGCTTATCAACTTGTGTATGGAAGCAGCGGACACA | + |
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Preference number: 6 (lower is better) Translates to: GQVSSINQPAIF*LINLCMEAADT Trigger: TGTGTCCGCTGCTTCCATACACAAGTTGATAAGCCAGAAAATGGCAGGCTGATTTATACTGGAAACCTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS CAA 72 bp | GAATATATGTGCGCTCTCTGGAATTGTCACGTCGTCTaGGTGAAACACTGTGCTGGTTTCCGAAAGCATAAC | + |
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Preference number: 6 (lower is better) Translates to: EYMCALWNCHVV*VKHCAGFRKHN Trigger: GTTATGCTTTCGGAAACCAGCACAGTGTTTCACCAAGACGACGTGACAATTCCAGAGAGCGCACATATATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS GCA 72 bp | ATATCGTTCGGGCCAGGTTTCCAGTATAAATCAGCCTaGCATTTTCTGGCTTATCAACTTGTGTATGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: ISFGPGFQYKSA*HFLAYQLVYGS Trigger: GCTTCCATACACAAGTTGATAAGCCAGAAAATGGCAGGCTGATTTATACTGGAAACCTGGCCCGAACGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS CAA 90 bp | AAAGCTGGTGAATATATGTGCGCTCTCTGGAATTGTCACGTCGTCTaGGTGAAACACTGTGCTGGTTTCCGAAAGCATAACATTGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: KAGEYMCALWNCHVV*VKHCAGFRKHNIVS Trigger: ACTTACAATGTTATGCTTTCGGAAACCAGCACAGTGTTTCACCAAGACGACGTGACAATTCCAGAGAGCGCACATATATTCACCAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS TCA 72 bp | TTGCAAAGGCAGACTTCCAAACATCATGTTATTTTGTaGGAGAAGGTACGGCAAGAATGCAAGGCTGACAAC | + |
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Preference number: 6 (lower is better) Translates to: LQRQTSKHHVIL*EKVRQECKADN Trigger: GTTGTCAGCCTTGCATTCTTGCCGTACCTTCTCTCACAAAATAACATGATGTTTGGAAGTCTGCCTTTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS CCA 72 bp | TTTAGCATAAAAGCTGGTGAATATATGTGCGCTCTCTaGAATTGTCACGTCGTCTTGGTGAAACACTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: FSIKAGEYMCAL*NCHVVLVKHCA Trigger: AGCACAGTGTTTCACCAAGACGACGTGACAATTCCAGAGAGCGCACATATATTCACCAGCTTTTATGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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| CDS CAA 72 bp | AGTATAAATCAGCCTGCCATTTTCTGGCTTATCAACTaGTGTATGGAAGCAGCGGACACATTGTTCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: SINQPAIFWLIN*CMEAADTLFPT Trigger: TGTTGGGAACAATGTGTCCGCTGCTTCCATACACAAGTTGATAAGCCAGAAAATGGCAGGCTGATTTATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065373.6 ENSMUST00000177501.2 |
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