Pregenerated sensors for TMEM68 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028232Ensembl transcript IDs: ENSMUST00000029891.12, ENSMUST00000154922.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCTAATGTTCCCCGGTATCCTTTGGTGCTTGTCAATCAAAGCTTaGACAGCATTCTTGGTCTTTTCGGCTAATTCTTCTGCTGTTACC | + |
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Preference number: 1 (lower is better) Translates to: LLMFPGILWCLSIKA*TAFLVFSANSSAVT Trigger: GGTAACAGCAGAAGAATTAGCCGAAAAGACCAAGAATGCTGTTCAAGCTTTGATTGACAAGCACCAAAGGATACCGGGGAACATTAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR CCA 90 bp | TCTTTTCGGCTAATTCTTCTGCTGTTACCTTTGGGTCATATGGTATaGGATCACCTAAGAAGGTCCGCAACTTTACAGGAAAACCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: SFRLILLLLPLGHMV*DHLRRSATLQENLH Trigger: ATGGAGGTTTTCCTGTAAAGTTGCGGACCTTCTTAGGTGATCCCATACCATATGACCCAAAGGTAACAGCAGAAGAATTAGCCGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR GCA 90 bp | CAATATACAACCTACAAGACAGTACCACAGATGCAAACTTGTCACTaGAGACACATTAAGCTATCTGCTAATGAGCCTTCTGCTCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: QYTTYKTVPQMQTCH*RHIKLSANEPSALY Trigger: ATAAAGAGCAGAAGGCTCATTAGCAGATAGCTTAATGTGTCTGCAGTGACAAGTTTGCATCTGTGGTACTGTCTTGTAGGTTGTATATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | CACGTTACTGGCTGCAAAGCACAGGAAGAGAGCCCGGATACTGAGCGAGACCAGAACCCACTTCTAACATaGACTGCAGAGCATGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: HVTGCKAQEESPDTERDQNPLLT*TAEHAH Trigger: ATGGGCATGCTCTGCAGTTCATGTTAGAAGTGGGTT...CTGGTCTCGCTCAGTATCCGGGCTCTCTTCCTGTGCTTTGCAGCCAGTAACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | CACGTTACTGGCTGCAAAGCACAGGAAGAGAGCCCGGATACTGAGCGAGACCAGACTGCAAATGCAACATaGTCATTTGCTGAGTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: HVTGCKAQEESPDTERDQTANAT*SFAESS Trigger: GCTTGACTCAGCAAATGATCATGTTGCATTTGCAGT...CTGGTCTCGCTCAGTATCCGGGCTCTCTTCCTGTGCTTTGCAGCCAGTAACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | CACGTTACTGGCTGCAAAGCACAGGAAGAGAGCCCGGATACTGAGCGAGACCAGACTGGACATCATACCTaGAGGAGTAGTTTCAACATC | + |
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Preference number: 2 (lower is better) Translates to: HVTGCKAQEESPDTERDQTGHHT*RSSFNI Trigger: GATGTTGAAACTACTCCTTCAGGTATGATGTCCAGT...CTGGTCTCGCTCAGTATCCGGGCTCTCTTCCTGTGCTTTGCAGCCAGTAACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR CAA 90 bp | ATGAAAGCGGTCCAGCAGAGCACTCCTAATGTTCCCCGGTATCCTTaGGTGCTTGTCAATCAAAGCTTGAACAGCATTCTTGGTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: MKAVQQSTPNVPRYP*VLVNQSLNSILGLF Trigger: GAAAAGACCAAGAATGCTGTTCAAGCTTTGATTGACAAGCACCAAAGGATACCGGGGAACATTAGGAGTGCTCTGCTGGACCGCTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAAACCACGTTACTGGCTaGAAAGCACAGGAAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: AANWLLSLKLSLKYTDYINHVTG*KAQEES Trigger: GCTCTCTTCCTGTGCTTTGCAGCCAGTAACGTGGTT...TATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR CAA 90 bp | GAACAGCATTCTTGGTCTTTTCGGCTAATTCTTCTGCTGTTACCTTaGGGTCATATGGTATGGGATCACCTAAGAAGGTCCGCAACTTTA | + |
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Preference number: 2 (lower is better) Translates to: EQHSWSFRLILLLLP*GHMVWDHLRRSATL Trigger: TAAAGTTGCGGACCTTCTTAGGTGATCCCATACCATATGACCCAAAGGTAACAGCAGAAGAATTAGCCGAAAAGACCAAGAATGCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGAACCCACTTCTAACATaGACTGCAGAGCATGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRNPLLT*TAEHAH Trigger: ATGGGCATGCTCTGCAGTTCATGTTAGAAGTGGGTT...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGAACCAAGTACCATTTACTAAAGTGAGAGGGAGTGGCAGCAAATTGGCTACATCTCTTTCAATGTaGTTGGCAACTGGACATCAT | + |
|
Preference number: 2 (lower is better) Translates to: ALNQVPFTKVRGSGSKLATSLSM*LATGHH Trigger: ATGATGTCCAGTTGCCAAGCACATTGAAAGAGATGT...AGCCAATTTGCTGCCACTCCCTCTCACTTTAGTAAATGGTACTTGGTTCAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTAATGTTCCCCGGTATCCTTTGGTGCTTGTCAATCAAAGCTTGAACAGCACCCTACTATCATATTaGCACAACAGACACAAACAT | + |
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Preference number: 2 (lower is better) Translates to: TPNVPRYPLVLVNQSLNSTLLSY*HNRHKH Trigger: ATGTTTGTGTCTGTTGTGCCAATATGATAGTAGGGT...GCTGTTCAAGCTTTGATTGACAAGCACCAAAGGATACCGGGGAACATTAGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGACGTTTGGGTCATATGGTATaGGATCACCTAAGAAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: NWLLSLKLSLKYTDYIGRLGHMV*DHLRRS Trigger: GGACCTTCTTAGGTGATCCCATACCATATGACCCAA...ACGTCCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAACTGCAAATGCAACATaGTCATTTGCTGAGTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: AANWLLSLKLSLKYTDYITANAT*SFAESS Trigger: GCTTGACTCAGCAAATGATCATGTTGCATTTGCAGT...TATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGTGCAGAGCATGCCCATaGTTTTGTCTTTACACCATA | + |
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Preference number: 2 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRCRACP*FCLYTI Trigger: TATGGTGTAAAGACAAAATCATGGGCATGCTCTGCA...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGCATCAATTGCAACCTaGGCAAAGCCTTTACGATTA | + |
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Preference number: 2 (lower is better) Translates to: AANWLLSLKLSLKYTDYIASIAT*AKPLRL Trigger: TAATCGTAAAGGCTTTGCTCAGGTTGCAATTGATGC...TATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR GCA 90 bp | TATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGACAACCACGTTACTGGCTaGAAAGCACAGGAAGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: YTTYLLWSKEMTTETYGDNHVTG*KAQEES Trigger: GCTCTCTTCCTGTGCTTTGCAGCCAGTAACGTGGTT...GTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATACTCTTTCAATGTGCTTaGCAACTGGACATCATACCT | + |
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Preference number: 2 (lower is better) Translates to: AANWLLSLKLSLKYTDYILFQCA*QLDIIP Trigger: AGGTATGATGTCCAGTTGCCAAGCACATTGAAAGAG...TATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGAACATGATCATTTGCTaGGTCAAGCAAATGATGAGC | + |
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Preference number: 2 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRNMIIC*VKQMMS Trigger: GCTCATCATTTGCTTGACTCAGCAAATGATCATGTT...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATACTTAACATAAATCATTaGGGTGCAAAAGAGTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: AANWLLSLKLSLKYTDYILNINH*GAKEFH Trigger: GTGGAACTCTTTTGCACCTCAATGATTTATGTTAAG...TATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | GTACGTTTTATTAAAATAATAACCACGTTACTGGCTGCAAAGCACAGGAAGAGATCTTGTGCCTCCAAGTaGTCTAAATCCTTCTCGAAT | + |
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Preference number: 2 (lower is better) Translates to: VRFIKIITTLLAAKHRKRSCASK*SKSFSN Trigger: ATTCGAGAAGGATTTAGATCACTTGGAGGCACAAGA...TCTCTTCCTGTGCTTTGCAGCCAGTAACGTGGTTATTATTTTAATAAAACGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR TCA 90 bp | ACGTATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGAGATAGCTAACAAGTaGCCACTCCTCAAGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: TYTTYLLWSKEMTTETYGEIANK*PLLKIS Trigger: TGAAATCTTGAGGAGTGGTCACTTGTTAGCTATCTC...TCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGCATAAATCATTGAGGTaGAAAAGAGTTCCACAACTT | + |
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Preference number: 2 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRHKSLR*KRVPQL Trigger: AAGTTGTGGAACTCTTTTGCACCTCAATGATTTATG...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR GCA 90 bp | AATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGACGTCATAAATCATTGAGGTaGAAAAGAGTTCCACAACTT | + |
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Preference number: 2 (lower is better) Translates to: NWLLSLKLSLKYTDYIGRHKSLR*KRVPQL Trigger: AAGTTGTGGAACTCTTTTGCACCTCAATGATTTATG...ACGTCCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR GCA 90 bp | GTACGTTTTATTAAAATAATAACCACGTTACTGGCTGCAAAGCACAGGAAGAGAATGCAAACTTGTCACTaGAGACACATTAAGCTATCT | + |
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Preference number: 2 (lower is better) Translates to: VRFIKIITTLLAAKHRKRMQTCH*RHIKLS Trigger: AGATAGCTTAATGTGTCTGCAGTGACAAGTTTGCAT...TCTCTTCCTGTGCTTTGCAGCCAGTAACGTGGTTATTATTTTAATAAAACGTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR GCA 90 bp | TATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGACCACTTTTGCATCAATTaGAACCTGAGCAAAGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: YTTYLLWSKEMTTETYGDHFCIN*NLSKAF Trigger: AAAGGCTTTGCTCAGGTTGCAATTGATGCAAAAGTG...GTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR CAA 90 bp | GTCCCTGAAATATACAGACTACATAGGACGTATACCACATATTTATaGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGACAATTTT | + |
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Preference number: 2 (lower is better) Translates to: VPEIYRLHRTYTTYL*WSKEMTTETYGDNF Trigger: AAAATTGTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATACGTCCTATGTAGTCTGTATATTTCAGGGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR GCA 90 bp | TATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGACATGCAAACTTGTCACTaGAGACACATTAAGCTATCT | + |
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Preference number: 2 (lower is better) Translates to: YTTYLLWSKEMTTETYGDMQTCH*RHIKLS Trigger: AGATAGCTTAATGTGTCTGCAGTGACAAGTTTGCAT...GTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR CCA 90 bp | TATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGACACCCTACTATCATATTaGCACAACAGACACAAACAT | + |
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Preference number: 2 (lower is better) Translates to: YTTYLLWSKEMTTETYGDTLLSY*HNRHKH Trigger: ATGTTTGTGTCTGTTGTGCCAATATGATAGTAGGGT...GTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR CCA 90 bp | GGAATGAAGGACAGATACATAAAGGCATCACTCATCTTAATTAAGCAAGTGCTAAACACATTTTTCTCTTaGTCCATGAAGAGCACAAAA | + |
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Preference number: 2 (lower is better) Translates to: GMKDRYIKASLILIKQVLNTFFS*SMKSTK Trigger: TTTTGTGCTCTTCATGGACCAAGAGAAAAATGTGTT...TAGCACTTGCTTAATTAAGATGAGTGATGCCTTTATGTATCTGTCCTTCATTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGGGGAGTGGCAGCAAATaGGCTCCTTTCTCTGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRGSGSK*APFSEV Trigger: AACTTCAGAGAAAGGAGCCAATTTGCTGCCACTCCC...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR CAA 90 bp | AATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGACGTGTTCCCCGGTATCCTTaGGTGCTTGTCAATCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: NWLLSLKLSLKYTDYIGRVPRYP*VLVNQS Trigger: GCTTTGATTGACAAGCACCAAAGGATACCGGGGAAC...ACGTCCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR TCA 72 bp | GAACCCACTTCTAACATGAACTGCAGAGCATGCCCATaGTTTTGTCTTTACACCATAAAACACTGTGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: EPTSNMNCRACP*FCLYTIKHCAD Trigger: GTCAGCACAGTGTTTTATGGTGTAAAGACAAAATCATGGGCATGCTCTGCAGTTCATGTTAGAAGTGGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR GCA 72 bp | ACCTACAAGACAGTACCACAGATGCAAACTTGTCACTaGAGACACATTAAGCTATCTGCTAATGAGCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: TYKTVPQMQTCH*RHIKLSANEPS Trigger: AGAAGGCTCATTAGCAGATAGCTTAATGTGTCTGCAGTGACAAGTTTGCATCTGTGGTACTGTCTTGTAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR CCA 72 bp | CTAATTCTTCTGCTGTTACCTTTGGGTCATATGGTATaGGATCACCTAAGAAGGTCCGCAACTTTACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: LILLLLPLGHMV*DHLRRSATLQE Trigger: TTCCTGTAAAGTTGCGGACCTTCTTAGGTGATCCCATACCATATGACCCAAAGGTAACAGCAGAAGAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGTCTCTTTCAATGTGCTaGGCAACTGGACATCATACC | + |
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Preference number: 3 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRSLSMC*ATGHHT Trigger: GGTATGATGTCCAGTTGCCAAGCACATTGAAAGAGA...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGGCACTTTTGCATCAATaGCAACCTGAGCAAAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRALLHQ*QPEQSL Trigger: AAGGCTTTGCTCAGGTTGCAATTGATGCAAAAGTGC...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR CCA 72 bp | GAAGGTCCGCAACTTTACAGGAAAACCTCCATACATTaGAGCAAATGGATAGCGGAATTTTTCATAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: EGPQLYRKTSIH*SKWIAEFFIKP Trigger: TGGCTTTATGAAAAATTCCGCTATCCATTTGCTCCAATGTATGGAGGTTTTCCTGTAAAGTTGCGGACCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTTGAACCAAGTACCATTTACTAAAGTGAGAGGGAGTGGCAGCAAATTGGCTATGCAACATGATCATTaGCTGAGTCAAGCAAATGAT | + |
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Preference number: 3 (lower is better) Translates to: ALNQVPFTKVRGSGSKLAMQHDH*LSQAND Trigger: ATCATTTGCTTGACTCAGCAAATGATCATGTTGCAT...AGCCAATTTGCTGCCACTCCCTCTCACTTTAGTAAATGGTACTTGGTTCAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR-3UTR CAA 90 bp | TATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGACGTTCCTGGGCCAGCTTaGCTTTTATTACTCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: YTTYLLWSKEMTTETYGDVPGPA*LLLLQR Trigger: TCTCTGGAGTAATAAAAGCAAAGCTGGCCCAGGAAC...GTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR TCA 72 bp | ATAGGAATAATGGGCACTTTTGCATCAATTGCAACCTaGGCAAAGCCTTTACGATTACCCCATATGATGTTG | + |
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Preference number: 3 (lower is better) Translates to: IGIMGTFASIAT*AKPLRLPHMML Trigger: CAACATCATATGGGGTAATCGTAAAGGCTTTGCTCAGGTTGCAATTGATGCAAAAGTGCCCATTATTCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR CAA 90 bp | GTACGTTTTATTAAAATAATAACCACGTTACTGGCTGCAAAGCACAGGAAGAGACACCCTACTATCATATaGGCACAACAGACACAAACA | + |
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Preference number: 3 (lower is better) Translates to: VRFIKIITTLLAAKHRKRHPTII*AQQTQT Trigger: TGTTTGTGTCTGTTGTGCCAATATGATAGTAGGGTG...TCTCTTCCTGTGCTTTGCAGCCAGTAACGTGGTTATTATTTTAATAAAACGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR TCA 72 bp | TCTCTTTCAATGTGCTTGGCAACTGGACATCATACCTaGAGGAGTAGTTTCAACATCCAATGGACAAAATTA | + |
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Preference number: 3 (lower is better) Translates to: SLSMCLATGHHT*RSSFNIQWTKL Trigger: TAATTTTGTCCATTGGATGTTGAAACTACTCCTTCAGGTATGATGTCCAGTTGCCAAGCACATTGAAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR GCA 72 bp | TGTAAACATAGGAATAATGGGCACTTTTGCATCAATTaGAACCTGAGCAAAGCCTTTACGATTACCCCATAT | + |
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Preference number: 3 (lower is better) Translates to: CKHRNNGHFCIN*NLSKAFTITPY Trigger: ATATGGGGTAATCGTAAAGGCTTTGCTCAGGTTGCAATTGATGCAAAAGTGCCCATTATTCCTATGTTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
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| 3UTR-3UTR CAA 90 bp | ACGTATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGACTCCTTTCTCTGAAGTaGTCCCTGAAATATACAGAC | + |
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Preference number: 3 (lower is better) Translates to: TYTTYLLWSKEMTTETYGLLSLK*SLKYTD Trigger: GTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAG...TCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
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| 3UTR GCA 72 bp | ACCCAAGTATACAAAGGTGGTAGGAGACAGACATACTaGAGTGAGCTTATGATACTTTGTTGTTTAAATACT | + |
|
Preference number: 3 (lower is better) Translates to: TQVYKGGRRQTY*SELMILCCLNT Trigger: AGTATTTAAACAACAAAGTATCATAAGCTCACTGCAGTATGTCTGTCTCCTACCACCTTTGTATACTTGGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| 3UTR CCA 72 bp | TACAGACTACATAGGACGTATACCACATATTTATTGTaGTCAAAAGAAATGACTACTGAGACGTATGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: YRLHRTYTTYLL*SKEMTTETYGD Trigger: GTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATACGTCCTATGTAGTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR TCA 90 bp | CACGTTACTGGCTGCAAAGCACAGGAAGAGAGCCCGGATACTGAGCGAGACCAGGCATCAATTGCAACCTaGGCAAAGCCTTTACGATTA | + |
|
Preference number: 4 (lower is better) Translates to: HVTGCKAQEESPDTERDQASIAT*AKPLRL Trigger: TAATCGTAAAGGCTTTGCTCAGGTTGCAATTGATGC...CTGGTCTCGCTCAGTATCCGGGCTCTCTTCCTGTGCTTTGCAGCCAGTAACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR GCA 90 bp | CACGTTACTGGCTGCAAAGCACAGGAAGAGAGCCCGGATACTGAGCGAGACCAGAATAATGGGCACTTTTaGATCAATTGCAACCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVTGCKAQEESPDTERDQNNGHF*INCNLS Trigger: GCTCAGGTTGCAATTGATGCAAAAGTGCCCATTATT...CTGGTCTCGCTCAGTATCCGGGCTCTCTTCCTGTGCTTTGCAGCCAGTAACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| 3UTR CAA 72 bp | GTCCAGCAGAGCACTCCTAATGTTCCCCGGTATCCTTaGGTGCTTGTCAATCAAAGCTTGAACAGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQQSTPNVPRYP*VLVNQSLNSIL Trigger: AAGAATGCTGTTCAAGCTTTGATTGACAAGCACCAAAGGATACCGGGGAACATTAGGAGTGCTCTGCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGCACAGAGTCCTGTCCTaGAGCACAGGTTTGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRHRVLS*STGLVV Trigger: AACAACCAAACCTGTGCTGCAGGACAGGACTCTGTG...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR GCA 90 bp | AATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGACGTCACAGAGTCCTGTCCTaGAGCACAGGTTTGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NWLLSLKLSLKYTDYIGRHRVLS*STGLVV Trigger: AACAACCAAACCTGTGCTGCAGGACAGGACTCTGTG...ACGTCCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| 3UTR CAA 72 bp | GAGGGAGTGGCAGCAAATTGGCTCCTTTCTCTGAAGTaGTCCCTGAAATATACAGACTACATAGGACGTATA | + |
|
Preference number: 4 (lower is better) Translates to: EGVAANWLLSLK*SLKYTDYIGRI Trigger: TATACGTCCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGCCACTCCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| 3UTR CAA 72 bp | TCTTGGTCTTTTCGGCTAATTCTTCTGCTGTTACCTTaGGGTCATATGGTATGGGATCACCTAAGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWSFRLILLLLP*GHMVWDHLRRS Trigger: GGACCTTCTTAGGTGATCCCATACCATATGACCCAAAGGTAACAGCAGAAGAATTAGCCGAAAAGACCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
||
| CDS-3UTR TCA 90 bp | GTACGTTTTATTAAAATAATAACCACGTTACTGGCTGCAAAGCACAGGAAGAGAGCCTTCTGCTCTTTATaGAAGCGGTCCAGCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRFIKIITTLLAAKHRKRAFCSL*KRSSRA Trigger: TGCTCTGCTGGACCGCTTTCATAAAGAGCAGAAGGC...TCTCTTCCTGTGCTTTGCAGCCAGTAACGTGGTTATTATTTTAATAAAACGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| 3UTR CAA 72 bp | GTACCATTTACTAAAGTGAGAGGGAGTGGCAGCAAATaGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: VPFTKVRGSGSK*APFSEVVPEIY Trigger: GTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGCCACTCCCTCTCACTTTAGTAAATGGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGAAGTGCAGCTCCTTCTaGTATCTTTTCCATCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRKCSSF*YLFHPM Trigger: CATGGGATGGAAAAGATACCAGAAGGAGCTGCACTT...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGTTCCACAACTTGCCAGCAGTTGTGAATGGAATGAAGGACAGATACATTTGGGTCATATGGTATaGGATCACCTAAGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRVPQLASSCEWNEGQIHLGHMV*DHLRRS Trigger: GGACCTTCTTAGGTGATCCCATACCATATGACCCAA...ATGTATCTGTCCTTCATTCCATTCACAACTGCTGGCAAGTTGTGGAACTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CCA 90 bp | AATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGACGTTTCCCCGGTATCCTTTaGTGCTTGTCAATCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NWLLSLKLSLKYTDYIGRFPGIL*CLSIKA Trigger: AGCTTTGATTGACAAGCACCAAAGGATACCGGGGAA...ACGTCCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CCA 90 bp | ACTCCTAATGTTCCCCGGTATCCTTTGGTGCTTGTCAATCAAAGCTTGAACAGCCTGGCTGGTTTCTACTaGAATTTTAAAGACAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPNVPRYPLVLVNQSLNSLAGFY*NFKDKV Trigger: CACTTTGTCTTTAAAATTCCAGTAGAAACCAGCCAG...GCTGTTCAAGCTTTGATTGACAAGCACCAAAGGATACCGGGGAACATTAGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
||
| 3UTR CAA 72 bp | AGAAGGTCCGCAACTTTACAGGAAAACCTCCATACATaGGAGCAAATGGATAGCGGAATTTTTCATAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSATLQENLHT*EQMDSGIFHKA Trigger: GGCTTTATGAAAAATTCCGCTATCCATTTGCTCCAATGTATGGAGGTTTTCCTGTAAAGTTGCGGACCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGAGATAGCTAACAAGTaGCCACTCCTCAAGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AANWLLSLKLSLKYTDYIEIANK*PLLKIS Trigger: TGAAATCTTGAGGAGTGGTCACTTGTTAGCTATCTC...TATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR TCA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGTCTTGTGCCTCCAAGTaGTCTAAATCCTTCTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRSCASK*SKSFSN Trigger: ATTCGAGAAGGATTTAGATCACTTGGAGGCACAAGA...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CCA 90 bp | CAATATACAACCTACAAGACAGTACCACAGATGCAAACTTGTCACTGCAGACACAAAACCTCCATACATTaGAGCAAATGGATAGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QYTTYKTVPQMQTCHCRHKTSIH*SKWIAE Trigger: TTCCGCTATCCATTTGCTCCAATGTATGGAGGTTTT...GTGTCTGCAGTGACAAGTTTGCATCTGTGGTACTGTCTTGTAGGTTGTATATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR GCA 90 bp | AATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGACGTCACTTTTGCATCAATTaGAACCTGAGCAAAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NWLLSLKLSLKYTDYIGRHFCIN*NLSKAF Trigger: AAAGGCTTTGCTCAGGTTGCAATTGATGCAAAAGTG...ACGTCCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CCA 90 bp | GCTTTGAACCAAGTACCATTTACTAAAGTGAGAGGGAGTGGCAGCAAATTGGCTAACACATTTTTCTCTTaGTCCATGAAGAGCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALNQVPFTKVRGSGSKLANTFFS*SMKSTK Trigger: TTTTGTGCTCTTCATGGACCAAGAGAAAAATGTGTT...AGCCAATTTGCTGCCACTCCCTCTCACTTTAGTAAATGGTACTTGGTTCAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATATTGTCAATCAAAGCTTaGACAGCATTCTTGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AANWLLSLKLSLKYTDYILSIKA*TAFLVF Trigger: AAAGACCAAGAATGCTGTTCAAGCTTTGATTGACAA...TATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CCA 90 bp | TATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGACAAGTGCAGCTCCTTCTaGTATCTTTTCCATCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: YTTYLLWSKEMTTETYGDKCSSF*YLFHPM Trigger: CATGGGATGGAAAAGATACCAGAAGGAGCTGCACTT...GTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CCA 90 bp | AATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGACGTAGTAGTAAAAGTCTATaGGGATGGCTCCATGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: NWLLSLKLSLKYTDYIGRSSKSL*GWLHDK Trigger: TTTATCATGGAGCCATCCCCATAGACTTTTACTACT...ACGTCCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CCA 90 bp | TCAATATACAACCTACAAGACAGTACCACAGATGCAAACTTGTCACTGCAGACACAAGTTCTGCCTTTCTaGATGAAAATTTTAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SIYNLQDSTTDANLSLQTQVLPF*MKILAM Trigger: CATGGCTAAAATTTTCATCCAGAAAGGCAGAACTTG...TGTCTGCAGTGACAAGTTTGCATCTGTGGTACTGTCTTGTAGGTTGTATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGCTTGAACAGCATTCTTaGTCTTTTCGGCTAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRLEQHS*SFRLIL Trigger: AAGAATTAGCCGAAAAGACCAAGAATGCTGTTCAAG...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CCA 90 bp | CCTCAAGATTTCAACACATTTTTCTCTTGGTCCATGAAGAGCACAAAACACATCATTTTAAAGACAAAGTaGTCAGCTACTACTCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQDFNTFFSWSMKSTKHIILKTK*SATTRQ Trigger: TTGCCGAGTAGTAGCTGACCACTTTGTCTTTAAAAT...GATGTGTTTTGTGCTCTTCATGGACCAAGAGAAAAATGTGTTGAAATCTTGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154922.8 |
||
| CDS-3UTR CCA 90 bp | TATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGACTTCTGCTGTTACCTTTaGGTCATATGGTATGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YTTYLLWSKEMTTETYGDFCCYL*VIWYGI Trigger: GATCCCATACCATATGACCCAAAGGTAACAGCAGAA...GTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR GCA 90 bp | GTACGTTTTATTAAAATAATAACCACGTTACTGGCTGCAAAGCACAGGAAGAGACCACAAAAGATGGTTTaGAAAATTCAGATAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRFIKIITTLLAAKHRKRPQKMV*KIQIVL Trigger: GAGGACTATCTGAATTTTGCAAACCATCTTTTGTGG...TCTCTTCCTGTGCTTTGCAGCCAGTAACGTGGTTATTATTTTAATAAAACGTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CCA 90 bp | GGAATGAAGGACAGATACATAAAGGCATCACTCATCTTAATTAAGCAAGTGCTAAGTAGTAAAAGTCTATaGGGATGGCTCCATGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GMKDRYIKASLILIKQVLSSKSL*GWLHDK Trigger: TTTATCATGGAGCCATCCCCATAGACTTTTACTACT...TAGCACTTGCTTAATTAAGATGAGTGATGCCTTTATGTATCTGTCCTTCATTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CCA 90 bp | ACACTAATCAATATACAACCTACAAGACAGTACCACAGATGCAAACTTGTCACTATTTTAAAGACAAAGTaGTCAGCTACTACTCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLINIQPTRQYHRCKLVTILKTK*SATTRQ Trigger: TTGCCGAGTAGTAGCTGACCACTTTGTCTTTAAAAT...AGTGACAAGTTTGCATCTGTGGTACTGTCTTGTAGGTTGTATATTGATTAGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR GCA 90 bp | TATACCACATATTTATTGTGGTCAAAAGAAATGACTACTGAGACGTATGGAGACCCACAAAAGATGGTTTaGAAAATTCAGATAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YTTYLLWSKEMTTETYGDPQKMV*KIQIVL Trigger: GAGGACTATCTGAATTTTGCAAACCATCTTTTGTGG...GTCTCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| 3UTR CAA 72 bp | ATATACAGACTACATAGGACGTATACCACATATTTATaGTGGTCAAAAGAAATGACTACTGAGACGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IYRLHRTYTTYL*WSKEMTTETYG Trigger: TCCATACGTCTCAGTAGTCATTTCTTTTGACCACAATAAATATGTGGTATACGTCCTATGTAGTCTGTATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CAA 90 bp | CACGTTACTGGCTGCAAAGCACAGGAAGAGAGCCCGGATACTGAGCGAGACCAGCCCACAAAAGATGGTTaGCAAAATTCAGATAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HVTGCKAQEESPDTERDQPTKDG*QNSDSP Trigger: AGGACTATCTGAATTTTGCAAACCATCTTTTGTGGG...CTGGTCTCGCTCAGTATCCGGGCTCTCTTCCTGTGCTTTGCAGCCAGTAACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATACAGATAGTCCTCCAATaGCTCCACACCCAACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: AANWLLSLKLSLKYTDYIQIVLQ*LHTQPL Trigger: GAGTGGTTGGGTGTGGAGCAATTGGAGGACTATCTG...TATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAATTGGCTCCTTTCTCTGAAGTTGTCCCTGAAATATACAGACTACATAGGCAGATAGTCCTCCAATaGCTCCACACCCAACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SKLAPFSEVVPEIYRLHRQIVLQ*LHTQPL Trigger: GAGTGGTTGGGTGTGGAGCAATTGGAGGACTATCTG...CCTATGTAGTCTGTATATTTCAGGGACAACTTCAGAGAAAGGAGCCAATTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTGAACCAAGTACCATTTACTAAAGTGAGAGGGAGTGGCAGCAAATTGGCTCAACACATTTTTCTCTaGGTCCATGAAGAGCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALNQVPFTKVRGSGSKLAQHIFL*VHEEHK Trigger: TTTGTGCTCTTCATGGACCAAGAGAAAAATGTGTTG...AGCCAATTTGCTGCCACTCCCTCTCACTTTAGTAAATGGTACTTGGTTCAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CAA 90 bp | TCAATATACAACCTACAAGACAGTACCACAGATGCAAACTTGTCACTGCAGACAGCACTTTTGCATCAATaGCAACCTGAGCAAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SIYNLQDSTTDANLSLQTALLHQ*QPEQSL Trigger: AAGGCTTTGCTCAGGTTGCAATTGATGCAAAAGTGC...TGTCTGCAGTGACAAGTTTGCATCTGTGGTACTGTCTTGTAGGTTGTATATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CAA 90 bp | GGAATGAAGGACAGATACATAAAGGCATCACTCATCTTAATTAAGCAAGTGCTAGTTCCCCGGTATCCTTaGGTGCTTGTCAATCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GMKDRYIKASLILIKQVLVPRYP*VLVNQS Trigger: GCTTTGATTGACAAGCACCAAAGGATACCGGGGAAC...TAGCACTTGCTTAATTAAGATGAGTGATGCCTTTATGTATCTGTCCTTCATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CAA 90 bp | GTACGTTTTATTAAAATAATAACCACGTTACTGGCTGCAAAGCACAGGAAGAGAGAAAACCTCCATACATaGGAGCAAATGGATAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRFIKIITTLLAAKHRKRENLHT*EQMDSG Trigger: TCCGCTATCCATTTGCTCCAATGTATGGAGGTTTTC...TCTCTTCCTGTGCTTTGCAGCCAGTAACGTGGTTATTATTTTAATAAAACGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029891.12 |
||
| CDS-3UTR CAA 90 bp | GGAATGAAGGACAGATACATAAAGGCATCACTCATCTTAATTAAGCAAGTGCTACCCACAAAAGATGGTTaGCAAAATTCAGATAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GMKDRYIKASLILIKQVLPTKDG*QNSDSP Trigger: AGGACTATCTGAATTTTGCAAACCATCTTTTGTGGG...TAGCACTTGCTTAATTAAGATGAGTGATGCCTTTATGTATCTGTCCTTCATTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029891.12 ENSMUST00000154922.8 |
||