Pregenerated sensors for TMEM67 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049488Ensembl transcript IDs: ENSMUST00000050686.10, ENSMUST00000108293.3, ENSMUST00000131145.9
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCTTGATTCATCTCATACTTCACTGAGAAGGAAATCTGCTTGGTaGGTCAGGAAGTGGACCCAGCTGCTGAGGCTACCGAGGACATGT | + |
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Preference number: 1 (lower is better) Translates to: LLDSSHTSLRRKSAW*VRKWTQLLRLPRTC Trigger: ACATGTCCTCGGTAGCCTCAGCAGCTGGGTCCACTTCCTGACTCACCAAGCAGATTTCCTTCTCAGTGAAGTATGAGATGAATCAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR TCA 90 bp | TCAAATAGATTTGACACCGTGAGGAAAAGCAGGCAGGTCATGTTCTaGAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: SNRFDTVRKSRQVMF*NNGKFQPAVKTRDS Trigger: GCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACCTGCCTGCTTTTCCTCACGGTGTCAAATCTATTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
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| 3UTR GCA 90 bp | TTCCTAGGTCATTTTCTCGCCCACTTACTGCATCCACTAAGAAAATaGGCCGAGTCAGAAGCCACTTGCTGGAGCTACTGTCTTGGTTCA | + |
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Preference number: 1 (lower is better) Translates to: FLGHFLAHLLHPLRK*AESEATCWSYCLGS Trigger: TGAACCAAGACAGTAGCTCCAGCAAGTGGCTTCTGACTCGGCGCATTTTCTTAGTGGATGCAGTAAGTGGGCGAGAAAATGACCTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR GCA 90 bp | TCTGAATCTCATTCCATTCATTTGCCACGAAATACGTTCTCCATATaGTCACAGGAACAGTGGCACTCCGCACACCACCCTCACCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: SESHSIHLPRNTFSI*SQEQWHSAHHPHLQ Trigger: TTGAAGGTGAGGGTGGTGTGCGGAGTGCCACTGTTCCTGTGAGCATATGGAGAACGTATTTCGTGGCAAATGAATGGAATGAGATTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CCA 90 bp | GGTTGGCGTGAGTCCAGCATGCAGCTGCTGTTGCCTGCAAATACTTaGCAAACCATTCTGAATTTAATGACATGCCAAGCTCTCCATAAC | + |
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Preference number: 1 (lower is better) Translates to: GWRESSMQLLLPANT*QTILNLMTCQALHN Trigger: GTTATGGAGAGCTTGGCATGTCATTAAATTCAGAATGGTTTGCCAAGTATTTGCAGGCAACAGCAGCTGCATGCTGGACTCACGCCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CCA 90 bp | ATTTGTAGGAAGAGGTGTAGTACTGAGAACTTGAGGAGCCAATCCTaGCTGGTCTCCATAGAACAGCCAAGGAAGGTTCTGTCTCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: ICRKRCSTENLRSQS*LVSIEQPRKVLSPE Trigger: TTCTGGAGACAGAACCTTCCTTGGCTGTTCTATGGAGACCAGCCAGGATTGGCTCCTCAAGTTCTCAGTACTACACCTCTTCCTACAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR GCA 90 bp | AGTCTCATGAATCCTGTCATAGTGTTGTCTCATCTGACTAGAAACTaGAATCTGAAACGTCTGCCCATCCGTGTTGGGCACCAAACCTCT | + |
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Preference number: 1 (lower is better) Translates to: SLMNPVIVLSHLTRN*NLKRLPIRVGHQTS Trigger: AGAGGTTTGGTGCCCAACACGGATGGGCAGACGTTTCAGATTGCAGTTTCTAGTCAGATGAGACAACACTATGACAGGATTCATGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CCA 90 bp | TGGCTGGTCTCCATAGAACAGCCAAGGAAGGTTCTGTCTCCAGAATaGAACAGAATGCACACTGATCAATCCAGCAGTGCTTTCAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: WLVSIEQPRKVLSPE*NRMHTDQSSSAFKD Trigger: ATCTTTGAAAGCACTGCTGGATTGATCAGTGTGCATTCTGTTCCATTCTGGAGACAGAACCTTCCTTGGCTGTTCTATGGAGACCAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR TCA 90 bp | ACAGCCAAGGAAGGTTCTGTCTCCAGAATGGAACAGAATGCACACTaGTCAATCCAGCAGTGCTTTCAAAGATGTAATGGAACAGTCGAC | + |
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Preference number: 1 (lower is better) Translates to: TAKEGSVSRMEQNAH*SIQQCFQRCNGTVD Trigger: GTCGACTGTTCCATTACATCTTTGAAAGCACTGCTGGATTGATCAGTGTGCATTCTGTTCCATTCTGGAGACAGAACCTTCCTTGGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR TCA 90 bp | CGTATGCTCAGTGAAATCTGGGTAGCAACTCGAATTACTCTTGGCTaGTTTCCTAGGTCATTTTCTCGCCCACTTACTGCATCCACTAAG | + |
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Preference number: 1 (lower is better) Translates to: RMLSEIWVATRITLG*FPRSFSRPLTASTK Trigger: CTTAGTGGATGCAGTAAGTGGGCGAGAAAATGACCTAGGAAATCAGCCAAGAGTAATTCGAGTTGCTACCCAGATTTCACTGAGCATACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR TCA 90 bp | GTTCATATTCATTTCCTCCATGTTAGTGTCTGCATGGCCGTGGACTaGCCTCCCATGAATGTAATATCCAAAACATCTGTGGGACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: VHIHFLHVSVCMAVD*PPMNVISKTSVGQQ Trigger: CTGCTGTCCCACAGATGTTTTGGATATTACATTCATGGGAGGTCAGTCCACGGCCATGCAGACACTAACATGGAGGAAATGAATATGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR GCA 90 bp | CTGCTGAAGTCAACCAGGAGTTTAGAGAGAGAGATTTCACAATTTTaGTGGTACGTTGTTCCAAAAGCATACGCTGCATCCAGCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: LLKSTRSLEREISQF*WYVVPKAYAASSLL Trigger: GAGAAGGCTGGATGCAGCGTATGCTTTTGGAACAACGTACCAGCAAAATTGTGAAATCTCTCTCTCTAAACTCCTGGTTGACTTCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CCA 90 bp | CAGTGCTTTCAAAGATGTAATGGAACAGTCGACAAGCATCGAGTGTaGTCGAGTCGTAAGAGTTCATGTTCATCACGCACATATTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: QCFQRCNGTVDKHRV*SSRKSSCSSRTYFQ Trigger: TTGGAAATATGTGCGTGATGAACATGAACTCTTACGACTCGACCACACTCGATGCTTGTCGACTGTTCCATTACATCTTTGAAAGCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR GCA 90 bp | TTCCTTATGAACGTGGTCAATGAAAGAGCCAAGGAACTTATTCATTaGGTGGTATGCTTTGATGCTTTGTTCAAAAGTACTCCCCGACGA | + |
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Preference number: 1 (lower is better) Translates to: FLMNVVNERAKELIH*VVCFDALFKSTPRR Trigger: TCGTCGGGGAGTACTTTTGAACAAAGCATCAAAGCATACCACGCAATGAATAAGTTCCTTGGCTCTTTCATTGACCACGTTCATAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR GCA 90 bp | GAGTGGATTAATTTTTCTCACAGTCTGAATCTCATTCCATTCATTTaGCACGAAATACGTTCTCCATATGCTCACAGGAACAGTGGCACT | + |
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Preference number: 1 (lower is better) Translates to: EWINFSHSLNLIPFI*HEIRSPYAHRNSGT Trigger: AGTGCCACTGTTCCTGTGAGCATATGGAGAACGTATTTCGTGGCAAATGAATGGAATGAGATTCAGACTGTGAGAAAAATTAATCCACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR TCA 90 bp | AATGGCCTTCATCATTATAGAAGATGCTCTTCTCCATGGGCTCCATaGATTCCATCCCAAGGATTCTTTCAAGAAGCAACTTATCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: NGLHHYRRCSSPWAP*IPSQGFFQEATYLL Trigger: TAAAAGATAAGTTGCTTCTTGAAAGAATCCTTGGGATGGAATTCATGGAGCCCATGGAGAAGAGCATCTTCTATAATGATGAAGGCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR GCA 90 bp | AGGTATGTGAGGAAGGATGCTAAAACAAAGTCCTGGCAAGCCAAATCCACAACATCATGGGGCTCCCGATaGGCCTCTTCCATCCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: RYVRKDAKTKSWQAKSTTSWGSR*ASSIPL Trigger: CAGCGGGATGGAAGAGGCGCATCGGGAGCCCCATGA...TGTTGTGGATTTGGCTTGCCAGGACTTTGTTTTAGCATCCTTCCTCACATACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCAAAAGTACTCCCCGACGAACTCAGCAGTCTGGCAGGGCCATTTCTCCTTTGAGGAGCCAATCCTaGCTGGTCTCCATAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: LFKSTPRRTQQSGRAISPLRSQS*LVSIEQ Trigger: CTGTTCTATGGAGACCAGCCAGGATTGGCTCCTCAA...AGGAGAAATGGCCCTGCCAGACTGCTGAGTTCGTCGGGGAGTACTTTTGAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAGCAGCTGCTGTTGCCTaGAAATACTTGGCAAACCAT | + |
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Preference number: 2 (lower is better) Translates to: VLKQWQVSACCQDPGQHRAAAVA*KYLANH Trigger: ATGGTTTGCCAAGTATTTGCAGGCAACAGCAGCTGC...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR GCA 90 bp | CTCGAATTACTCTTGGCTGATTTCCTAGGTCATTTTCTCGCCCACTTACTGCATGGCGTGAGTCCAGCATaGAGCTGCTGTTGCCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LELLLADFLGHFLAHLLHGVSPA*SCCCLQ Trigger: TTGCAGGCAACAGCAGCTGCATGCTGGACTCACGCC...ATGCAGTAAGTGGGCGAGAAAATGACCTAGGAAATCAGCCAAGAGTAATTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CAA 90 bp | CTTGGCACGATGTCAGGTTGGCGTGAGTCCAGCATGCAGCTGCTGTaGCCTGCAAATACTTGGCAAACCATTCTGAATTTAATGACATGC | + |
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Preference number: 2 (lower is better) Translates to: LGTMSGWRESSMQLL*PANTWQTILNLMTC Trigger: GCATGTCATTAAATTCAGAATGGTTTGCCAAGTATTTGCAGGCAACAGCAGCTGCATGCTGGACTCACGCCAACCTGACATCGTGCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CAA 90 bp | GAAAGAGCCAAGGAACTTATTCATTGCGTGGTATGCTTTGATGCTTaGTTCAAAAGTACTCCCCGACGAACTCAGCAGTCTGGCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: ERAKELIHCVVCFDA*FKSTPRRTQQSGRA Trigger: GGCCCTGCCAGACTGCTGAGTTCGTCGGGGAGTACTTTTGAACAAAGCATCAAAGCATACCACGCAATGAATAAGTTCCTTGGCTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR CCA 90 bp | ACTAAGAAAATGCGCCGAGTCAGAAGCCACTTGCTGGAGCTACTGTCTTGGTTCATATTTCCAAGAGCTTaGCACGATGTCAGGTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: TKKMRRVRSHLLELLSWFIFPRA*HDVRLA Trigger: CGCCAACCTGACATCGTGCCAAGCTCTTGGAAATAT...GAACCAAGACAGTAGCTCCAGCAAGTGGCTTCTGACTCGGCGCATTTTCTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CAA 90 bp | AAGTACTCCCCGACGAACTCAGCAGTCTGGCAGGGCCATTTCTCCTaGTTAAAGTCTCATGAATCCTGTCATAGTGTTGTCTCATCTGAC | + |
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Preference number: 2 (lower is better) Translates to: KYSPTNSAVWQGHFS*LKSHESCHSVVSSD Trigger: GTCAGATGAGACAACACTATGACAGGATTCATGAGACTTTAACAAGGAGAAATGGCCCTGCCAGACTGCTGAGTTCGTCGGGGAGTACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR GCA 90 bp | CGTGGACTGACCTCCCATGAATGTAATATCCAAAACATCTGTGGGACAGCAGGATCCAAAAGCATACGCTaGATCCAGCCTTCTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: RGLTSHECNIQNICGTAGSKSIR*IQPSLS Trigger: ACTGAGAGAAGGCTGGATGCAGCGTATGCTTTTGGA...TCCTGCTGTCCCACAGATGTTTTGGATATTACATTCATGGGAGGTCAGTCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR GCA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGTTTGTTTGTATGTTTaGCTCCTGGTCAGTGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: NNGKFQPAVKTRDSTESGVCLYV*LLVSVN Trigger: ATTAACACTGACCAGGAGGCAAACATACAAACAAAC...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCATAGTGTTGTCTCATCTGACTAGAAACTGCAATCTGAAACGTCTGCCCGCATGCAGCTGCTGTTaGCTGCAAATACTTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: PVIVLSHLTRNCNLKRLPACSCC*LQILGK Trigger: TTTGCCAAGTATTTGCAGGCAACAGCAGCTGCATGC...GGGCAGACGTTTCAGATTGCAGTTTCTAGTCAGATGAGACAACACTATGACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CAA 90 bp | GCTGCTGAAGTCAACCAGGAGTTTAGAGAGAGAGATTTCACAATTTaGCTGGTACGTTGTTCCAAAAGCATACGCTGCATCCAGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: AAEVNQEFRERDFTI*LVRCSKSIRCIQPS Trigger: AGAAGGCTGGATGCAGCGTATGCTTTTGGAACAACGTACCAGCAAAATTGTGAAATCTCTCTCTCTAAACTCCTGGTTGACTTCAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CAA 90 bp | ACATATGTGAAGGACAGCTGGGTGCTCAAAACTCAAACACAGCCTTaGTCAGGGCTTCGCAGACTGGCTATGAGCATTTTTGATGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: TYVKDSWVLKTQTQP*SGLRRLAMSIFDVN Trigger: ATTGACATCAAAAATGCTCATAGCCAGTCTGCGAAGCCCTGACAAAGGCTGTGTTTGAGTTTTGAGCACCCAGCTGTCCTTCACATATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR CCA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGTGTATGTTTGCCTCCTaGTCAGTGTTAATGTACTAT | + |
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Preference number: 2 (lower is better) Translates to: GHVLKQWQVSACCQDPGQCMFAS*SVLMYY Trigger: ATAGTACATTAACACTGACCAGGAGGCAAACATACA...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAACTCAAACACAGCCTTTGTCAGGGCTTCGCAGACTGGCTATGAGCATTCTGGAGCTACTGTCTTaGTTCACAAACAGTTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LKTQTQPLSGLRRLAMSILELLS*FTNSLL Trigger: CAACAAACTGTTTGTGAACCAAGACAGTAGCTCCAG...AATGCTCATAGCCAGTCTGCGAAGCCCTGACAAAGGCTGTGTTTGAGTTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTCACCTTCAACAGCTTTAAGAACTTTTCCTTTCGGCCGTTCCCAATCATATGTGAAGGACAGCTaGGTGCTCAAAACTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: PPSPSTALRTFPFGRSQSYVKDS*VLKTQT Trigger: TGTTTGAGTTTTGAGCACCCAGCTGTCCTTCACATA...TGATTGGGAACGGCCGAAAGGAAAAGTTCTTAAAGCTGTTGAAGGTGAGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CAA 90 bp | TGGTCAATGAAAGAGCCAAGGAACTTATTCATTGCGTGGTATGCTTaGATGCTTTGTTCAAAAGTACTCCCCGACGAACTCAGCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: WSMKEPRNLFIAWYA*MLCSKVLPDELSSL Trigger: CAGACTGCTGAGTTCGTCGGGGAGTACTTTTGAACAAAGCATCAAAGCATACCACGCAATGAATAAGTTCCTTGGCTCTTTCATTGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTCTAGAAAGGCTGGAGGATGAATCCATTAACGCTAAATTTTTGAATCCCCACAGAAAGTGGGGCTaGGAGGGGCTTGTTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: GFLERLEDESINAKFLNPHRKWG*EGLVCF Trigger: AAAACAAACAAGCCCCTCCCAGCCCCACTTTCTGTG...GGGATTCAAAAATTTAGCGTTAATGGATTCATCCTCCAGCCTTTCTAGAAACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGTCCTACTGTATTTCGGATAAATCGGAAAATCTCTTGTTGCAGGTATGTAGGAAATCTGCTTGGTaGGTCAGGAAGTGGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLSYCISDKSENLLLQVCRKSAW*VRKWTQ Trigger: CTGGGTCCACTTCCTGACTCACCAAGCAGATTTCCT...ACATACCTGCAACAAGAGATTTTCCGATTTATCCGAAATACAGTAGGACAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR TCA 90 bp | CGTGGACTGACCTCCCATGAATGTAATATCCAAAACATCTGTGGGACAGCAGGAGGATTTTGTCTTCTATaGATCTCTCATAAAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RGLTSHECNIQNICGTAGGFCLL*ISHKRQ Trigger: CTGCCTTTTATGAGAGATTCATAGAAGACAAAATCC...TCCTGCTGTCCCACAGATGTTTTGGATATTACATTCATGGGAGGTCAGTCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGTCCTACTGTATTTCGGATAAATCGGAAAATCTCTTGTTGCAGGTATGTACAACAGATCAAAGATaGGGAGCGTGGCCTCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: LLSYCISDKSENLLLQVCTTDQR*GAWPRS Trigger: GGAACGAGGCCACGCTCCTCATCTTTGATCTGTTGT...ACATACCTGCAACAAGAGATTTTCCGATTTATCCGAAATACAGTAGGACAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGGACTGACCTCCCATGAATGTAATATCCAAAACATCTGTGGGACAGCAGGAGCAACAAACTTCAGCTaGTTTTGTCCTTTAAAACTG | + |
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Preference number: 2 (lower is better) Translates to: RGLTSHECNIQNICGTAGATNFS*FCPLKL Trigger: CAGTTTTAAAGGACAAAACCAGCTGAAGTTTGTTGC...TCCTGCTGTCCCACAGATGTTTTGGATATTACATTCATGGGAGGTCAGTCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGAACAACAGATCAAAGATGAGGAGCGTGGCCTCGTTCCCATAATACAGATGCTCAGTGAAATCTaGGTAGCAACTCGAATTACT | + |
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Preference number: 2 (lower is better) Translates to: TEEQQIKDEERGLVPIIQMLSEI*VATRIT Trigger: AGTAATTCGAGTTGCTACCCAGATTTCACTGAGCAT...CTGTATTATGGGAACGAGGCCACGCTCCTCATCTTTGATCTGTTGTTCTTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTAAAACACCACCTTCTAAAGGTTGCCATTTGATGAAGTTTCCTCGTATAAGTCCAGCATGCAGCTaGTGTTGCCTGCAAATACTT | + |
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Preference number: 2 (lower is better) Translates to: SCKTPPSKGCHLMKFPRISPACS*CCLQIL Trigger: AAGTATTTGCAGGCAACAGCAGCTGCATGCTGGACT...TATACGAGGAAACTTCATCAAATGGCAACCTTTAGAAGGTGGTGTTTTACAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTTAGAGAGAGAGATTTCACAATTTTGCTGGTACGTTGTTCCAAAAGCATACCAGAATGGAACAGAATaGACACTGATCAATCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLEREISQFCWYVVPKAYQNGTE*TLINPA Trigger: TGCTGGATTGATCAGTGTGCATTCTGTTCCATTCTG...GTATGCTTTTGGAACAACGTACCAGCAAAATTGTGAAATCTCTCTCTCTAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CAA 90 bp | ATTTTTGAATCCCACAACCTCCAAGAAGAAGAGTGTGGTAAGCACTaGAAAGAGTGGATTAATTTTTCTCACAGTCTGAATCTCATTCCA | + |
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Preference number: 2 (lower is better) Translates to: IFESHNLQEEECGKH*KEWINFSHSLNLIP Trigger: TGGAATGAGATTCAGACTGTGAGAAAAATTAATCCACTCTTTCAAGTGCTTACCACACTCTTCTTCTTGGAGGTTGTGGGATTCAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTTAGAGAGAGAGATTTCACAATTTTGCTGGTACGTTGTTCCAAAAGCATACGTTTGTTTGTATGTTTaGCTCCTGGTCAGTGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: SLEREISQFCWYVVPKAYVCLYV*LLVSVN Trigger: ATTAACACTGACCAGGAGGCAAACATACAAACAAAC...GTATGCTTTTGGAACAACGTACCAGCAAAATTGTGAAATCTCTCTCTCTAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAGAGAGAGAGATTTCACAATTTTGCTGGTACGTTGTTCCAAAAGCATACTGTATGTTTGCCTCCTaGTCAGTGTTAATGTACTAT | + |
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Preference number: 2 (lower is better) Translates to: SLEREISQFCWYVVPKAYCMFAS*SVLMYY Trigger: ATAGTACATTAACACTGACCAGGAGGCAAACATACA...GTATGCTTTTGGAACAACGTACCAGCAAAATTGTGAAATCTCTCTCTCTAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR CCA 72 bp | CGCACATATTTCCAAGAGCTTGGCACGATGTCAGGTTaGCGTGAGTCCAGCATGCAGCTGCTGTTGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: RTYFQELGTMSG*RESSMQLLLPA Trigger: TGCAGGCAACAGCAGCTGCATGCTGGACTCACGCCAACCTGACATCGTGCCAAGCTCTTGGAAATATGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| 3UTR GCA 72 bp | GCAGGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTaGTGTCAAGACCCGGGACAGCACAGAAAGTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGHVLKQWQVSA*CQDPGQHRKWG Trigger: GCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| 3UTR GCA 72 bp | AGCTTGGCACGATGTCAGGTTGGCGTGAGTCCAGCATaGAGCTGCTGTTGCCTGCAAATACTTGGCAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SLARCQVGVSPA*SCCCLQILGKP Trigger: TGGTTTGCCAAGTATTTGCAGGCAACAGCAGCTGCATGCTGGACTCACGCCAACCTGACATCGTGCCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR TCA 72 bp | CCAGCTGCTGAGGCTACCGAGGACATGTCACATATGTaGAGGACAGCTGGGTGCTCAAAACTCAAACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PAAEATEDMSHM*RTAGCSKLKHS Trigger: GCTGTGTTTGAGTTTTGAGCACCCAGCTGTCCTTCACATATGTGACATGTCCTCGGTAGCCTCAGCAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR TCA 72 bp | AATCTGCTTGGTGAGTCAGGAAGTGGACCCAGCTGCTaGGGCTACCGAGGACATGTCACATATGTGAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: NLLGESGSGPSC*GYRGHVTYVKD Trigger: GTCCTTCACATATGTGACATGTCCTCGGTAGCCTCAGCAGCTGGGTCCACTTCCTGACTCACCAAGCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR CCA 72 bp | CGTGAGGAAAAGCAGGCAGGTCATGTTCTGAAACAATaGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: REEKQAGHVLKQ*QVSACCQDPGQ Trigger: CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACCTGCCTGCTTTTCCTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| 3UTR CCA 72 bp | CCACGAAATACGTTCTCCATATGCTCACAGGAACAGTaGCACTCCGCACACCACCCTCACCTTCAACAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRNTFSICSQEQ*HSAHHPHLQQL Trigger: AAGCTGTTGAAGGTGAGGGTGGTGTGCGGAGTGCCACTGTTCCTGTGAGCATATGGAGAACGTATTTCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR CCA 72 bp | AACGTCTGCCCATCCGTGTTGGGCACCAAACCTCTTTaGCTGCACAAATTTTCCGCCTCTCTCTTAAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: NVCPSVLGTKPL*LHKFSASLLRF Trigger: GAACCTTAAGAGAGAGGCGGAAAATTTGTGCAGCCAAAGAGGTTTGGTGCCCAACACGGATGGGCAGACGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR GCA 72 bp | CATTTTCTCGCCCACTTACTGCATCCACTAAGAAAATaGGCCGAGTCAGAAGCCACTTGCTGGAGCTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: HFLAHLLHPLRK*AESEATCWSYC Trigger: ACAGTAGCTCCAGCAAGTGGCTTCTGACTCGGCGCATTTTCTTAGTGGATGCAGTAAGTGGGCGAGAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR GCA 72 bp | CATTCCATTCATTTGCCACGAAATACGTTCTCCATATaGTCACAGGAACAGTGGCACTCCGCACACCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: HSIHLPRNTFSI*SQEQWHSAHHP Trigger: AGGGTGGTGTGCGGAGTGCCACTGTTCCTGTGAGCATATGGAGAACGTATTTCGTGGCAAATGAATGGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR CCA 72 bp | AAGAGGTGTAGTACTGAGAACTTGAGGAGCCAATCCTaGCTGGTCTCCATAGAACAGCCAAGGAAGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KRCSTENLRSQS*LVSIEQPRKVL Trigger: CAGAACCTTCCTTGGCTGTTCTATGGAGACCAGCCAGGATTGGCTCCTCAAGTTCTCAGTACTACACCTCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACCCTCACCTTCAACAGCTTTAAGAACTTTTCCTTTCGGCCGTTCCCAATCAAGCATGCAGCTGCTGTaGCCTGCAAATACTTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PPSPSTALRTFPFGRSQSSMQLL*PANTWQ Trigger: TTGCCAAGTATTTGCAGGCAACAGCAGCTGCATGCT...TGATTGGGAACGGCCGAAAGGAAAAGTTCTTAAAGCTGTTGAAGGTGAGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAAACTCAAACACAGCCTTTGTCAGGGCTTCGCAGACTGGCTATGAGCATTCATATTTCCAAGAGCTaGGCACGATGTCAGGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LKTQTQPLSGLRRLAMSIHISKS*ARCQVG Trigger: GCCAACCTGACATCGTGCCAAGCTCTTGGAAATATG...AATGCTCATAGCCAGTCTGCGAAGCCCTGACAAAGGCTGTGTTTGAGTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR TCA 72 bp | CCAAATCCACAACACAGAAGAACAACAGATCAAAGATaGGGAGCGTGGCCTCGTTCCCATAATACAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: PNPQHRRTTDQR*GAWPRSHNTAH Trigger: GTGTGCTGTATTATGGGAACGAGGCCACGCTCCTCATCTTTGATCTGTTGTTCTTCTGTGTTGTGGATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR GCA 72 bp | ACAATTTTGCTGGTACGTTGTTCCAAAAGCATACGCTaGATCCAGCCTTCTCTCAGTGTCTGGACAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TILLVRCSKSIR*IQPSLSVWTKL Trigger: CAGCTTTGTCCAGACACTGAGAGAAGGCTGGATGCAGCGTATGCTTTTGGAACAACGTACCAGCAAAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR GCA 72 bp | AATCCTGTCATAGTGTTGTCTCATCTGACTAGAAACTaGAATCTGAAACGTCTGCCCATCCGTGTTGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NPVIVLSHLTRN*NLKRLPIRVGH Trigger: GTGCCCAACACGGATGGGCAGACGTTTCAGATTGCAGTTTCTAGTCAGATGAGACAACACTATGACAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR CCA 72 bp | ATCTGTGGGACAGCAGGAACACTGACACATTACTCATaGAGCACAGGTCAACAAACTGCCGGATTTTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ICGTAGTLTHYS*STGQQTAGFCL Trigger: AAGACAAAATCCGGCAGTTTGTTGACCTGTGCTCCATGAGTAATGTGTCAGTGTTCCTGCTGTCCCACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR TCA 72 bp | CACAGATGCGTCTCCTTGATTCATCTCATACTTCACTaGGAAGGAAATCTGCTTGGTGAGTCAGGAAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HRCVSLIHLILH*EGNLLGESGSG Trigger: TCCACTTCCTGACTCACCAAGCAGATTTCCTTCTCAGTGAAGTATGAGATGAATCAAGGAGACGCATCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR TCA 72 bp | CATTTCCTCCATGTTAGTGTCTGCATGGCCGTGGACTaGCCTCCCATGAATGTAATATCCAAAACATCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HFLHVSVCMAVD*PPMNVISKTSV Trigger: CACAGATGTTTTGGATATTACATTCATGGGAGGTCAGTCCACGGCCATGCAGACACTAACATGGAGGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR CCA 72 bp | GAGTCCAGCATGCAGCTGCTGTTGCCTGCAAATACTTaGCAAACCATTCTGAATTTAATGACATGCCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ESSMQLLLPANT*QTILNLMTCQA Trigger: AGCTTGGCATGTCATTAAATTCAGAATGGTTTGCCAAGTATTTGCAGGCAACAGCAGCTGCATGCTGGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR CCA 72 bp | CAAAGATGTAATGGAACAGTCGACAAGCATCGAGTGTaGTCGAGTCGTAAGAGTTCATGTTCATCACGCACA | + |
|
Preference number: 3 (lower is better) Translates to: QRCNGTVDKHRV*SSRKSSCSSRT Trigger: TGTGCGTGATGAACATGAACTCTTACGACTCGACCACACTCGATGCTTGTCGACTGTTCCATTACATCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR CCA 72 bp | TTTGTTCAAAAGTACTCCCCGACGAACTCAGCAGTCTaGCAGGGCCATTTCTCCTTGTTAAAGTCTCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: FVQKYSPTNSAV*QGHFSLLKSHE Trigger: TTCATGAGACTTTAACAAGGAGAAATGGCCCTGCCAGACTGCTGAGTTCGTCGGGGAGTACTTTTGAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR-3UTR CAA 90 bp | CGTGGACTGACCTCCCATGAATGTAATATCCAAAACATCTGTGGGACAGCAGGAGTTGCCTGCAAATACTaGGCAAACCATTCTGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: RGLTSHECNIQNICGTAGVACKY*ANHSEF Trigger: AAATTCAGAATGGTTTGCCAAGTATTTGCAGGCAAC...TCCTGCTGTCCCACAGATGTTTTGGATATTACATTCATGGGAGGTCAGTCCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR TCA 72 bp | AGTGAAATCTGGGTAGCAACTCGAATTACTCTTGGCTaGTTTCCTAGGTCATTTTCTCGCCCACTTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SEIWVATRITLG*FPRSFSRPLTA Trigger: TGCAGTAAGTGGGCGAGAAAATGACCTAGGAAATCAGCCAAGAGTAATTCGAGTTGCTACCCAGATTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR TCA 72 bp | GTAATATCCAAAACATCTGTGGGACAGCAGGAACACTaGCACATTACTCATGGAGCACAGGTCAACAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: VISKTSVGQQEH*HITHGAQVNKL Trigger: CAGTTTGTTGACCTGTGCTCCATGAGTAATGTGTCAGTGTTCCTGCTGTCCCACAGATGTTTTGGATATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR TCA 72 bp | GAAGGTTCTGTCTCCAGAATGGAACAGAATGCACACTaGTCAATCCAGCAGTGCTTTCAAAGATGTAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: EGSVSRMEQNAH*SIQQCFQRCNG Trigger: TCCATTACATCTTTGAAAGCACTGCTGGATTGATCAGTGTGCATTCTGTTCCATTCTGGAGACAGAACCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR GCA 72 bp | TCAACCAGGAGTTTAGAGAGAGAGATTTCACAATTTTaGTGGTACGTTGTTCCAAAAGCATACGCTGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: STRSLEREISQF*WYVVPKAYAAS Trigger: GGATGCAGCGTATGCTTTTGGAACAACGTACCAGCAAAATTGTGAAATCTCTCTCTCTAAACTCCTGGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAGAACAACAGATCAAAGATGAGGAGCGTGGCCTCGTTCCCATAATACAGGAGTGTGGTAAGCACTaGAAAGAGTGGATTAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: TEEQQIKDEERGLVPIIQECGKH*KEWINF Trigger: AAAATTAATCCACTCTTTCAAGTGCTTACCACACTC...CTGTATTATGGGAACGAGGCCACGCTCCTCATCTTTGATCTGTTGTTCTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR TCA 72 bp | CATCATTATAGAAGATGCTCTTCTCCATGGGCTCCATaGATTCCATCCCAAGGATTCTTTCAAGAAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: HHYRRCSSPWAP*IPSQGFFQEAT Trigger: AGTTGCTTCTTGAAAGAATCCTTGGGATGGAATTCATGGAGCCCATGGAGAAGAGCATCTTCTATAATGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTTCTAGAAAGGCTGGAGGATGAATCCATTAACGCTAAATTTTTGAATCCCCAACTCGAATTACTCTaGGCTGATTTCCTAGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GFLERLEDESINAKFLNPQLELL*ADFLGH Trigger: ATGACCTAGGAAATCAGCCAAGAGTAATTCGAGTTG...GGGATTCAAAAATTTAGCGTTAATGGATTCATCCTCCAGCCTTTCTAGAAACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTTTTCTCACAGTCTGAATCTCATTCCATTCATTTGCCACGAAATACGTTCTAGAGATTTCACAATTTaGCTGGTACGTTGTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NFSHSLNLIPFICHEIRSRDFTI*LVRCSK Trigger: TTTGGAACAACGTACCAGCAAAATTGTGAAATCTCT...AGAACGTATTTCGTGGCAAATGAATGGAATGAGATTCAGACTGTGAGAAAAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTCATCCCGCCGCTGGTTaGCGCCACAGGGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACHPAAG*RHRGHR Trigger: CCTGTGCCCCCTGTGGCGCCAACCAGCGGCGGGATG...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGCATCCCGCCGCTGGTTaGCGCCACAGGGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKFQPAVKTRDSTESGAGHPAAG*RHRGHR Trigger: CCTGTGCCCCCTGTGGCGCCAACCAGCGGCGGGATG...CCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTGGTGCCAGTCCGGGATaGAGAACGAGATCTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACGASPG*RTRSDR Trigger: GCGGTCAGATCTCGTTCTTCATCCCGGACTGGCACC...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTTGCTCACAGGAACAGTaGCACTCCGCACACCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SACCQDPGQHRKWGWEGLCSQEQ*HSAHHP Trigger: AGGGTGGTGTGCGGAGTGCCACTGTTCCTGTGAGCA...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTTGTCAAAGTACTGGTTaGAGTCGCAGGTCTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACCQSTG*SRRSQA Trigger: GGCCTGAGACCTGCGACTTCAACCAGTACTTTGACA...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTTGTCAAAGTACTGGTTaGAGTCGCAGGTCTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SACCQDPGQHRKWGWEGLCQSTG*SRRSQA Trigger: GGCCTGAGACCTGCGACTTCAACCAGTACTTTGACA...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTCGCAGCGGACACACCTaGTTCCTAAAGCATTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACRSGHT*FLKHWL Trigger: AAGCCAATGCTTTAGGAACCAGGTGTGTCCGCTGCG...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGGACAGCAGGAACACTaGCACATTACTCATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SACCQDPGQHRKWGWEGLGQQEH*HITHGA Trigger: TGCTCCATGAGTAATGTGTCAGTGTTCCTGCTGTCC...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTTCTCCATGGGCTCCATaGATTCCATCCCAAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SACCQDPGQHRKWGWEGLSPWAP*IPSQGF Trigger: GAATCCTTGGGATGGAATTCATGGAGCCCATGGAGA...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTTTGAGGAGCCAATCCTaGCTGGTCTCCATAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SACCQDPGQHRKWGWEGLLRSQS*LVSIEQ Trigger: CTGTTCTATGGAGACCAGCCAGGATTGGCTCCTCAA...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGGTGCCAGTCCGGGATaGAGAACGAGATCTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: NNGKFQPAVKTRDSTESGGASPG*RTRSDR Trigger: GCGGTCAGATCTCGTTCTTCATCCCGGACTGGCACC...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTCCACCTGTTAAAGTGTaGGGCTCTGAACATGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACPPVKV*GSEHEQ Trigger: CTGTTCATGTTCAGAGCCTCACACTTTAACAGGTGG...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGCATGCAGCTGCTGTTaGCTGCAAATACTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SACCQDPGQHRKWGWEGLACSCC*LQILGK Trigger: TTTGCCAAGTATTTGCAGGCAACAGCAGCTGCATGC...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTAGTCCAGCATGCAGCTaGTGTTGCCTGCAAATACTT | + |
|
Preference number: 4 (lower is better) Translates to: SACCQDPGQHRKWGWEGLSPACS*CCLQIL Trigger: AAGTATTTGCAGGCAACAGCAGCTGCATGCTGGACT...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGTCATGGGGCTCCCGATaGGCCTCTTCCATCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVSWGSR*ASSIPL Trigger: CAGCGGGATGGAAGAGGCGCATCGGGAGCCCCATGA...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGGCAGCTGCTGTTGCCTaGAAATACTTGGCAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKFQPAVKTRDSTESGAGAAAVA*KYLANH Trigger: ATGGTTTGCCAAGTATTTGCAGGCAACAGCAGCTGC...CCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTGGCTATGAGCATTTTTaGTGTCAATGTCACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACGYEHF*CQCHCR Trigger: CCTACAGTGACATTGACATCAAAAATGCTCATAGCC...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTTTCGCAGACTGGCTATaGGCATTTTTGATGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACFADWL*AFLMSM Trigger: CATTGACATCAAAAATGCTCATAGCCAGTCTGCGAA...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGAGGAGCTGTGTAGTCTaGTGGGTTTCTAGAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WQVSACCQDPGQHRKWGWRSCVV*WVSRKA Trigger: AGCCTTTCTAGAAACCCATCAGACTACACAGCTCCT...CCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTCTTGTTGCAGGTATGTaGGGAAGGATGCTAAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SACCQDPGQHRKWGWEGLLVAGM*GRMLKQ Trigger: TTGTTTTAGCATCCTTCCTCACATACCTGCAACAAG...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAGGCGTGAGTCCAGCATaGAGCTGCTGTTGCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLKQWQVSACCQDPGQHRGVSPA*SCCCLQ Trigger: TTGCAGGCAACAGCAGCTGCATGCTGGACTCACGCC...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTCAGAATGGAACAGAATaGACACTGATCAATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACQNGTE*TLINPA Trigger: TGCTGGATTGATCAGTGTGCATTCTGTTCCATTCTG...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTCCACCTTCTAAAGGTTaGCATTTGATGAAGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACPPSKG*HLMKFP Trigger: AGGAAACTTCATCAAATGGCAACCTTTAGAAGGTGG...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGAATACGTTCTCCATATaGTCACAGGAACAGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WQVSACCQDPGQHRKWGWNTFSI*SQEQWH Trigger: GTGCCACTGTTCCTGTGAGCATATGGAGAACGTATT...CCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTCTCATTCCATTCATTTaGCACGAAATACGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACLIPFI*HEIRSP Trigger: TGGAGAACGTATTTCGTGGCAAATGAATGGAATGAG...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGCTGGAGCTACTGTCTTaGTTCACAAACAGTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKFQPAVKTRDSTESGAGLELLS*FTNSLL Trigger: CAACAAACTGTTTGTGAACCAAGACAGTAGCTCCAG...CCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGATCTGCCCATCCGTGTTaGGCACCAAACCTCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLKQWQVSACCQDPGQHRSAHPC*APNLFG Trigger: GCCAAAGAGGTTTGGTGCCCAACACGGATGGGCAGA...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGACGAACTCAGCAGTCTaGCAGGGCCATTTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NNGKFQPAVKTRDSTESGTNSAV*QGHFSL Trigger: CAAGGAGAAATGGCCCTGCCAGACTGCTGAGTTCGT...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGACGAAACGTTCTTCCTaGACTGGCATCGGCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NNGKFQPAVKTRDSTESGTKRSS*TGIGSK Trigger: TTTGCTGCCGATGCCAGTTCAGGAAGAACGTTTCGT...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGGATTTTGTCTTCTATaGATCTCTCATAAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SACCQDPGQHRKWGWEGLGFCLL*ISHKRQ Trigger: CTGCCTTTTATGAGAGATTCATAGAAGACAAAATCC...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAACAACAGATCAAAGATaGGGAGCGTGGCCTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLKQWQVSACCQDPGQHRTTDQR*GAWPRS Trigger: GGAACGAGGCCACGCTCCTCATCTTTGATCTGTTGT...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGAGTCAGAAGCCACTTaGTGGAGCTACTGTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NNGKFQPAVKTRDSTESGESEAT*WSYCLG Trigger: ACCAAGACAGTAGCTCCAGCAAGTGGCTTCTGACTC...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGCGCAGCGGACACACCTaGTTCCTAAAGCATTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVRSGHT*FLKHWL Trigger: AAGCCAATGCTTTAGGAACCAGGTGTGTCCGCTGCG...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGCTCCATAACGTGCAGTaGAAATTACACGTTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKFQPAVKTRDSTESGAGLHNVQ*KLHVDE Trigger: TTCATCAACGTGTAATTTCCACTGCACGTTATGGAG...CCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTGCAACAAACTTCAGCTaGTTTTGTCCTTTAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACATNFS*FCPLKL Trigger: CAGTTTTAAAGGACAAAACCAGCTGAAGTTTGTTGC...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGTGCATGGCCGTGGACTaGCCTCCCATGAATGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: GHVLKQWQVSACCQDPGQCMAVD*PPMNVI Trigger: TATTACATTCATGGGAGGTCAGTCCACGGCCATGCA...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGTATGAACGTGGTCAATaGAAGAGCCAAGGAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WQVSACCQDPGQHRKWGWYERGQ*KSQGTY Trigger: ATAAGTTCCTTGGCTCTTTCATTGACCACGTTCATA...CCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCGGCATATCTCAGAATaGGGCTGTAAGGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHVLKQWQVSACCQDPGQRHISE*GCKELC Trigger: ACACAGCTCCTTACAGCCGCATTCTGAGATATGCCG...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTTTGCCTGCAAATACTTaGCAAACCATTCTGAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSRPGTAQKVGLGGACLPANT*QTILNL Trigger: TAAATTCAGAATGGTTTGCCAAGTATTTGCAGGCAA...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGATGCTCAGTGAAATCTaGGTAGCAACTCGAATTACT | + |
|
Preference number: 4 (lower is better) Translates to: WQVSACCQDPGQHRKWGWMLSEI*VATRIT Trigger: AGTAATTCGAGTTGCTACCCAGATTTCACTGAGCAT...CCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGTCTGTAAATCAATCATaGGGCTCCCGATGCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHVLKQWQVSACCQDPGQSVNQS*GSRCAS Trigger: AGAGGCGCATCGGGAGCCCCATGATTGATTTACAGA...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGCACCAAACCTCTTTaGCTGCACAAATTTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVGTKPL*LHKFSA Trigger: GGCGGAAAATTTGTGCAGCCAAAGAGGTTTGGTGCC...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGCATCCACTAGTGTTTTaGTTGCCAAATTCTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKFQPAVKTRDSTESGAGHPLVF*LPNSFV Trigger: GACAAAAGAATTTGGCAACCAAAACACTAGTGGATG...CCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGTCCAAAAGCATACGCTaGATCCAGCCTTCTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVSKSIR*IQPSLS Trigger: ACTGAGAGAAGGCTGGATGCAGCGTATGCTTTTGGA...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCATCCACTAAGAAAATaGGCCGAGTCAGAAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GHVLKQWQVSACCQDPGQHPLRK*AESEAT Trigger: AGTGGCTTCTGACTCGGCGCATTTTCTTAGTGGATG...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGACCAAACCTCTTTGGCTaGACAAATTTTCCGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLKQWQVSACCQDPGQHRPNLFG*TNFPPL Trigger: GAGAGGCGGAAAATTTGTGCAGCCAAAGAGGTTTGG...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGATATTTCCAAGAGCTTaGCACGATGTCAGGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVIFPRA*HDVRLA Trigger: CGCCAACCTGACATCGTGCCAAGCTCTTGGAAATAT...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGACGTTCTTCCTGAACTaGCATCGGCAGCAAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHVLKQWQVSACCQDPGQTFFLN*HRQQNR Trigger: TCTGTTTTGCTGCCGATGCCAGTTCAGGAAGAACGT...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| 3UTR CAA 72 bp | AAACGTCTGCCCATCCGTGTTGGGCACCAAACCTCTTaGGCTGCACAAATTTTCCGCCTCTCTCTTAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLPIRVGHQTS*AAQIFRLSLKV Trigger: AACCTTAAGAGAGAGGCGGAAAATTTGTGCAGCCAAAGAGGTTTGGTGCCCAACACGGATGGGCAGACGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| CDS-3UTR TCA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGAATACAGCACACTGCTaGAAGAATGGCCTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NNGKFQPAVKTRDSTESGNTAHC*KNGLHH Trigger: ATGATGAAGGCCATTCTTTCAGCAGTGTGCTGTATT...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCATCTGACTAGAAACTaGAATCTGAAACGTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHVLKQWQVSACCQDPGQHLTRN*NLKRLP Trigger: GGGCAGACGTTTCAGATTGCAGTTTCTAGTCAGATG...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGCGGAAAATCTCTTGTTaGAGGTATGTGAGGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NNGKFQPAVKTRDSTESGRKISC*RYVRKD Trigger: ATCCTTCCTCACATACCTGCAACAAGAGATTTTCCG...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGTTCTGTCTCCAGAATaGAACAGAATGCACACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NNGKFQPAVKTRDSTESGVLSPE*NRMHTD Trigger: ATCAGTGTGCATTCTGTTCCATTCTGGAGACAGAAC...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGCTGACACATTACTCATaGAGCACAGGTCAACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NNGKFQPAVKTRDSTESGLTHYS*STGQQT Trigger: AGTTTGTTGACCTGTGCTCCATGAGTAATGTGTCAG...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGTATCCAAAACATCTGTaGGACAGCAGGAACACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVYPKHL*DSRNTD Trigger: GTCAGTGTTCCTGCTGTCCCACAGATGTTTTGGATA...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| 3UTR CAA 72 bp | GCATCCACTAAGAAAATGCGCCGAGTCAGAAGCCACTaGCTGGAGCTACTGTCTTGGTTCACAAACAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASTKKMRRVRSH*LELLSWFTNSL Trigger: CAAACTGTTTGTGAACCAAGACAGTAGCTCCAGCAAGTGGCTTCTGACTCGGCGCATTTTCTTAGTGGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR CAA 72 bp | CCGACGAACTCAGCAGTCTGGCAGGGCCATTTCTCCTaGTTAAAGTCTCATGAATCCTGTCATAGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTNSAVWQGHFS*LKSHESCHSVV Trigger: GACAACACTATGACAGGATTCATGAGACTTTAACAAGGAGAAATGGCCCTGCCAGACTGCTGAGTTCGTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGACATCATTATAGAAGATaGTCTTCTCCATGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLKQWQVSACCQDPGQHRHHYRR*SSPWAP Trigger: TGGAGCCCATGGAGAAGAGCATCTTCTATAATGATG...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGGCTAAAACAAAGTCCTaGCAAGCCAAATCCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: GHVLKQWQVSACCQDPGQAKTKS*QAKSTT Trigger: TGTTGTGGATTTGGCTTGCCAGGACTTTGTTTTAGC...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGAATTCCCTGTGTTGCTaGAACATAATCCACCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVNSLCC*NIIHLL Trigger: TAACAGGTGGATTATGTTTCAGCAACACAGGGAATT...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR TCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGCGAATTACTCTTGGCTaGTTTCCTAGGTCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVRITLG*FPRSFS Trigger: AGAAAATGACCTAGGAAATCAGCCAAGAGTAATTCG...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGCTGAATTTAATGACATaGCAAGCTCTCCATAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVLNLMT*QALHNV Trigger: CACGTTATGGAGAGCTTGGCATGTCATTAAATTCAG...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAGAGATTTCACAATTTTaGTGGTACGTTGTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLKQWQVSACCQDPGQHREISQF*WYVVPK Trigger: TTTTGGAACAACGTACCAGCAAAATTGTGAAATCTC...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR GCA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGATTCATTGCGTGGTATaGTTTGATGCTTTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GHVLKQWQVSACCQDPGQIHCVV*FDALFK Trigger: TTTGAACAAAGCATCAAAGCATACCACGCAATGAAT...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CCA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGAACTTATTCATTGCGTaGTATGCTTTGATGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETMASFSLLSRPGTAQKVNLFIA*YALMLC Trigger: ACAAAGCATCAAAGCATACCACGCAATGAATAAGTT...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| 3UTR CAA 72 bp | AAGGAACTTATTCATTGCGTGGTATGCTTTGATGCTTaGTTCAAAAGTACTCCCCGACGAACTCAGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KELIHCVVCFDA*FKSTPRRTQQS Trigger: AGACTGCTGAGTTCGTCGGGGAGTACTTTTGAACAAAGCATCAAAGCATACCACGCAATGAATAAGTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| 3UTR CAA 72 bp | AAAGAGCCAAGGAACTTATTCATTGCGTGGTATGCTTaGATGCTTTGTTCAAAAGTACTCCCCGACGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: KEPRNLFIAWYA*MLCSKVLPDEL Trigger: GAGTTCGTCGGGGAGTACTTTTGAACAAAGCATCAAAGCATACCACGCAATGAATAAGTTCCTTGGCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
||
| CDS TCA 90 bp | GCGTTCAGAGCGCCAAGGGGTGGCTGGTTGGGCCTGGATTGCGCATaGGCAGAGAGACGGTGCATCGGTTTGTCCGGACCGGAGGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AFRAPRGGWLGLDCA*AERRCIGLSGPEGS Trigger: ACTCCCCTCCGGTCCGGACAAACCGATGCACCGTCTCTCTGCTCATGCGCAATCCAGGCCCAACCAGCCACCCCTTGGCGCTCTGAACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108293.3 |
||
| CDS CCA 90 bp | TCTGCGCACGCGCGTTCAGAGCGCCAAGGGGTGGCTGGTTGGGCCTaGATTGCGCATGAGCAGAGAGACGGTGCATCGGTTTGTCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SAHARSERQGVAGWA*IAHEQRDGASVCPD Trigger: GTCCGGACAAACCGATGCACCGTCTCTCTGCTCATGCGCAATCCAGGCCCAACCAGCCACCCCTTGGCGCTCTGAACGCGCGTGCGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108293.3 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTCTGCCCATCCGTGTaGGGCACCAAACCTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SACCQDPGQHRKWGWEGLVCPSV*GTKPLW Trigger: CCAAAGAGGTTTGGTGCCCAACACGGATGGGCAGAC...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS CCA 90 bp | CTGGTAGACATACACAGGAAGTTCCTAGTGCATCCCGCCGCTGGTTaGCGCCACAGGGGGCACAGGAGAGCGCCGAGATGTCAAAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LVDIHRKFLVHPAAG*RHRGHRRAPRCQST Trigger: AGTACTTTGACATCTCGGCGCTCTCCTGTGCCCCCTGTGGCGCCAACCAGCGGCGGGATGCACTAGGAACTTCCTGTGTATGTCTACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTCATATTTCCAAGAGCTaGGCACGATGTCAGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLSRPGTAQKVGLGGACHISKS*ARCQVG Trigger: GCCAACCTGACATCGTGCCAAGCTCTTGGAAATATG...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTTGTAGTACTGAGAACTaGAGGAGCCAATCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SACCQDPGQHRKWGWEGLCSTEN*RSQSWL Trigger: CAGCCAGGATTGGCTCCTCAAGTTCTCAGTACTACA...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CAA 90 bp | GGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGCAACTCGAATTACTCTaGGCTGATTTCCTAGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GKFQPAVKTRDSTESGAGQLELL*ADFLGH Trigger: ATGACCTAGGAAATCAGCCAAGAGTAATTCGAGTTG...CCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTCCACTAGTGTTTTGGTaGCCAAATTCTTTTGTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SACCQDPGQHRKWGWEGLPLVFW*PNSFVL Trigger: TAGGACAAAAGAATTTGGCAACCAAAACACTAGTGG...AAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTCTGGTTCCTAAAGCATaGGCTTTTGTAAATGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLSRPGTAQKVGLGGACLVPKA*AFVNEF Trigger: AAACTCATTTACAAAAGCCAATGCTTTAGGAACCAG...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000131145.9 |
||
| CDS-3UTR CAA 90 bp | AACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGAGCATGCAGCTGCTGTaGCCTGCAAATACTTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NNGKFQPAVKTRDSTESGSMQLL*PANTWQ Trigger: TTGCCAAGTATTTGCAGGCAACAGCAGCTGCATGCT...CCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGAGGGGCTTGTTCTAAAGGTTGCCATTaGATGAAGTTTCCTCGTATA | + |
|
Preference number: 5 (lower is better) Translates to: SLLSRPGTAQKVGLGGACSKGCH*MKFPRI Trigger: TATACGAGGAAACTTCATCAAATGGCAACCTTTAGA...ACAAGCCCCTCCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CAA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGGGGCACCAAACCTCTTaGGCTGCACAAATTTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GHVLKQWQVSACCQDPGQGHQTS*AAQIFR Trigger: GCGGAAAATTTGTGCAGCCAAAGAGGTTTGGTGCCC...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGTTGCCTGCAAATACTaGGCAAACCATTCTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: WQVSACCQDPGQHRKWGWVACKY*ANHSEF Trigger: AAATTCAGAATGGTTTGCCAAGTATTTGCAGGCAAC...CCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CAA 90 bp | GGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGGGAGTGTGGTAAGCACTaGAAAGAGTGGATTAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKFQPAVKTRDSTESGAGECGKH*KEWINF Trigger: AAAATTAATCCACTCTTTCAAGTGCTTACCACACTC...CCCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGGGGCTGGATTAACGCTAAATTTTaGAATCCCACAACCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: WQVSACCQDPGQHRKWGWINAKF*NPTTSK Trigger: CTTGGAGGTTGTGGGATTCAAAAATTTAGCGTTAAT...CCAGCCCCACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
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| CDS-3UTR CAA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGGCTGGAGCTACTGTCTaGGTTCACAAACAGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GHVLKQWQVSACCQDPGQAGATV*VHKQFV Trigger: AACAAACTGTTTGTGAACCAAGACAGTAGCTCCAGC...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS CCA 90 bp | GACCCACTAACATTTCTTTCCACTAATATATGGCCAGTGGGACAGTaGCACTTCCCCTCAGCAGTTAAGCCACTAGGACAAGAAATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DPLTFLSTNIWPVGQ*HFPSAVKPLGQEMQ Trigger: CTGCATTTCTTGTCCTAGTGGCTTAACTGCTGAGGGGAAGTGCCACTGTCCCACTGGCCATATATTAGTGGAAAGAAATGTTAGTGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
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| CDS-3UTR CAA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGATCTCATTCCATTCATTaGCCACGAAATACGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLKQWQVSACCQDPGQHRSHSIH*PRNTFS Trigger: GGAGAACGTATTTCGTGGCAAATGAATGGAATGAGA...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
||
| CDS GCA 90 bp | ATAATCCACCTGTTAAAGTGTGAGGCTCTGAACATGAACAGGACCTaGTTGTATTCACAAATGTTGGTTCGCAGCGGACACACCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IIHLLKCEALNMNRT*LYSQMLVRSGHTWF Trigger: GAACCAGGTGTGTCCGCTGCGAACCAACATTTGTGAATACAAGCAGGTCCTGTTCATGTTCAGAGCCTCACACTTTAACAGGTGGATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 |
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| CDS-3UTR CAA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAACAAACTGCCGGATTTaGTCTTCTATGAATCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLKQWQVSACCQDPGQHRTNCRI*SSMNLS Trigger: TGAGAGATTCATAGAAGACAAAATCCGGCAGTTTGT...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
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| CDS-3UTR CAA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGAATCCTGTCATAGTGTaGTCTCATCTGACTAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GHVLKQWQVSACCQDPGQNPVIV*SHLTRN Trigger: GTTTCTAGTCAGATGAGACAACACTATGACAGGATT...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
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| CDS-3UTR CAA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGGGTTGCCAAATTCTTTaGTCCTACTGTATTTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GHVLKQWQVSACCQDPGQGCQIL*SYCISD Trigger: ATCCGAAATACAGTAGGACAAAAGAATTTGGCAACC...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
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| CDS GCA 90 bp | AAACATAATCCACTAAAGTGTGAGGCTCTGAACATGAACAGGACCTaGTTGTATTCACAAATGTTGGTTCGCAGCGGACACACCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KHNPLKCEALNMNRT*LYSQMLVRSGHTWF Trigger: GAACCAGGTGTGTCCGCTGCGAACCAACATTTGTGAATACAAGCAGGTCCTGTTCATGTTCAGAGCCTCACACTTTAGTGGATTATGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| CDS-3UTR CAA 90 bp | GGTCATGTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGAGTGGAAATTACACGTaGATGAAAATTCCCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GHVLKQWQVSACCQDPGQSGNYT*MKIPCV Trigger: AACACAGGGAATTTTCATCAACGTGTAATTTCCACT...CTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAACATGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
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| CDS-3UTR CAA 90 bp | GAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAAAGTGAGAGATTTCACAATTTaGCTGGTACGTTGTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ETMASFSLLSRPGTAQKVRDFTI*LVRCSK Trigger: TTTGGAACAACGTACCAGCAAAATTGTGAAATCTCT...CACTTTCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
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| CDS-3UTR CAA 90 bp | GTTCTGAAACAATGGCAAGTTTCAGCCTGCTGTCAAGACCCGGGACAGCACAGAATTGCGTGGTATGCTTaGATGCTTTGTTCAAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VLKQWQVSACCQDPGQHRIAWYA*MLCSKV Trigger: TACTTTTGAACAAAGCATCAAAGCATACCACGCAAT...TCTGTGCTGTCCCGGGTCTTGACAGCAGGCTGAAACTTGCCATTGTTTCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050686.10 |
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| CDS-3UTR CAA 90 bp | CGTGGACTGACCTCCCATGAATGTAATATCCAAAACATCTGTGGGACAGCAGGACTGGTTCCTAAAGCATaGGCTTTTGTAAATGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RGLTSHECNIQNICGTAGLVPKA*AFVNEF Trigger: AAACTCATTTACAAAAGCCAATGCTTTAGGAACCAG...TCCTGCTGTCCCACAGATGTTTTGGATATTACATTCATGGGAGGTCAGTCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131145.9 |
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| CDS TCA 90 bp | CACTTTTTACAAATAATAGAAGGTCCTCCATTATTAGAGATCATATaGTATCCTGGTAGACATACACAGGAAGTTCCTAGTGCATCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HFLQIIEGPPLLEII*YPGRHTQEVPSASR Trigger: GCGGGATGCACTAGGAACTTCCTGTGTATGTCTACCAGGATATCATATGATCTCTAATAATGGAGGACCTTCTATTATTTGTAAAAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
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| CDS CCA 72 bp | GCGCACGCGCGTTCAGAGCGCCAAGGGGTGGCTGGTTaGGCCTGGATTGCGCATGAGCAGAGAGACGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AHARSERQGVAG*AWIAHEQRDGA Trigger: TGCACCGTCTCTCTGCTCATGCGCAATCCAGGCCCAACCAGCCACCCCTTGGCGCTCTGAACGCGCGTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108293.3 |
||
| CDS CAA 90 bp | CGCACGCGCGTTCAGAGCGCCAAGGGGTGGCTGGTTGGGCCTGGATaGCGCATGAGCAGAGAGACGGTGCATCGGTTTGTCCGGACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RTRVQSAKGWLVGPG*RMSRETVHRFVRTG Trigger: TCCGGTCCGGACAAACCGATGCACCGTCTCTCTGCTCATGCGCAATCCAGGCCCAACCAGCCACCCCTTGGCGCTCTGAACGCGCGTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108293.3 |
||
| CDS TCA 72 bp | GCGCCAAGGGGTGGCTGGTTGGGCCTGGATTGCGCATaGGCAGAGAGACGGTGCATCGGTTTGTCCGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: APRGGWLGLDCA*AERRCIGLSGP Trigger: CGGTCCGGACAAACCGATGCACCGTCTCTCTGCTCATGCGCAATCCAGGCCCAACCAGCCACCCCTTGGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108293.3 |
||
| CDS CCA 72 bp | CCGCCATGGCCGCCACAGGCCTTGTACGCGTCACCATaGTACCCATATCCTGGGTCCGCAGTCTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPWPPQALYASP*YPYPGSAVSSS Trigger: GGAGCTGGAGACTGCGGACCCAGGATATGGGTACCATGGTGACGCGTACAAGGCCTGTGGCGGCCATGGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108293.3 |
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| CDS CCA 72 bp | AGACATACACAGGAAGTTCCTAGTGCATCCCGCCGCTaGTTGGCGCCACAGGGGGCACAGGAGAGCGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RHTQEVPSASRR*LAPQGAQESAE Trigger: CTCGGCGCTCTCCTGTGCCCCCTGTGGCGCCAACCAGCGGCGGGATGCACTAGGAACTTCCTGTGTATGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
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| CDS CAA 72 bp | CATACACAGGAAGTTCCTAGTGCATCCCGCCGCTGGTaGGCGCCACAGGGGGCACAGGAGAGCGCCGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: HTQEVPSASRRW*APQGAQESAEM Trigger: CATCTCGGCGCTCTCCTGTGCCCCCTGTGGCGCCAACCAGCGGCGGGATGCACTAGGAACTTCCTGTGTATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
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| CDS CCA 72 bp | CAGGGGGCACAGGAGAGCGCCGAGATGTCAAAGTACTaGTTGAAGTCGCAGGTCTCAGGCCGCCGGAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QGAQESAEMSKY*LKSQVSGRRKG Trigger: CCCTTTCCGGCGGCCTGAGACCTGCGACTTCAACCAGTACTTTGACATCTCGGCGCTCTCCTGTGCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
||
| CDS CCA 72 bp | ATACACAGGAAGTTCCTAGTGCATCCCGCCGCTGGTTaGCGCCACAGGGGGCACAGGAGAGCGCCGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: IHRKFLVHPAAG*RHRGHRRAPRC Trigger: ACATCTCGGCGCTCTCCTGTGCCCCCTGTGGCGCCAACCAGCGGCGGGATGCACTAGGAACTTCCTGTGTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
||
| CDS CCA 72 bp | ACAGGCCTTGTACGCGTCACCATGGTACCCATATCCTaGGTCCGCAGTCTCCAGCTCCCCAGCAGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGLVRVTMVPIS*VRSLQLPSSLL Trigger: GAGGAGGCTGCTGGGGAGCTGGAGACTGCGGACCCAGGATATGGGTACCATGGTGACGCGTACAAGGCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108293.3 |
||
| CDS CAA 90 bp | GCGCCACAGGGGGCACAGGAGAGCGCCGAGATGTCAAAGTACTGGTaGAAGTCGCAGGTCTCAGGCCGCCGGAAAGGGAAGGAGAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: APQGAQESAEMSKYW*KSQVSGRRKGKEKI Trigger: AATCTTCTCCTTCCCTTTCCGGCGGCCTGAGACCTGCGACTTCAACCAGTACTTTGACATCTCGGCGCTCTCCTGTGCCCCCTGTGGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
||
| CDS CAA 90 bp | CCTGGTAGACATACACAGGAAGTTCCTAGTGCATCCCGCCGCTGGTaGGCGCCACAGGGGGCACAGGAGAGCGCCGAGATGTCAAAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: PGRHTQEVPSASRRW*APQGAQESAEMSKY Trigger: GTACTTTGACATCTCGGCGCTCTCCTGTGCCCCCTGTGGCGCCAACCAGCGGCGGGATGCACTAGGAACTTCCTGTGTATGTCTACCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
||
| CDS CAA 90 bp | TGTGAGGCTCTGAACATGAACAGGACCTGCTTGTATTCACAAATGTaGGTTCGCAGCGGACACACCTGGTTCCTAAAGCATTGGCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CEALNMNRTCLYSQM*VRSGHTWFLKHWLL Trigger: CAAAAGCCAATGCTTTAGGAACCAGGTGTGTCCGCTGCGAACCAACATTTGTGAATACAAGCAGGTCCTGTTCATGTTCAGAGCCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
||
| CDS CAA 72 bp | CTGAACATGAACAGGACCTGCTTGTATTCACAAATGTaGGTTCGCAGCGGACACACCTGGTTCCTAAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LNMNRTCLYSQM*VRSGHTWFLKH Trigger: ATGCTTTAGGAACCAGGTGTGTCCGCTGCGAACCAACATTTGTGAATACAAGCAGGTCCTGTTCATGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
||
| CDS CCA 72 bp | AACAAAGACCCACTAACATTTCTTTCCACTAATATATaGCCAGTGGGACAGTGGCACTTCCCCTCAGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: NKDPLTFLSTNI*PVGQWHFPSAV Trigger: AACTGCTGAGGGGAAGTGCCACTGTCCCACTGGCCATATATTAGTGGAAAGAAATGTTAGTGGGTCTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
||
| CDS TCA 72 bp | CACAGATGCGTCTCCTTGATTCATCTCATACTTCACTaGGAAGGAAATCTTCGCAGACTGGCTATGAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: HRCVSLIHLILH*EGNLRRLAMSI Trigger: AATGCTCATAGCCAGTCTGCGAAGATTTCCTTCTCAGTGAAGTATGAGATGAATCAAGGAGACGCATCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 |
||
| CDS CAA 90 bp | TTCACAAATGTTGGTTCGCAGCGGACACACCTGGTTCCTAAAGCATaGGCTTTTGTAAATGAGTTTTCACTTTCATCACAAAGCTCGCAA | + |
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Preference number: 6 (lower is better) Translates to: FTNVGSQRTHLVPKA*AFVNEFSLSSQSSQ Trigger: TTGCGAGCTTTGTGATGAAAGTGAAAACTCATTTACAAAAGCCAATGCTTTAGGAACCAGGTGTGTCCGCTGCGAACCAACATTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
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| CDS CCA 72 bp | AATTTAATGACATGCCAAGCTCTCCATAACGTGCAGTaGAAATTACACGTTGATGAAAATTCCCTGTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: NLMTCQALHNVQ*KLHVDENSLCC Trigger: GCAACACAGGGAATTTTCATCAACGTGTAATTTCCACTGCACGTTATGGAGAGCTTGGCATGTCATTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 |
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| CDS TCA 72 bp | CAAATAATAGAAGGTCCTCCATTATTAGAGATCATATaGTATCCTGGTAGACATACACAGGAAGTTCCTAGT | + |
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Preference number: 6 (lower is better) Translates to: QIIEGPPLLEII*YPGRHTQEVPS Trigger: ACTAGGAACTTCCTGTGTATGTCTACCAGGATATCATATGATCTCTAATAATGGAGGACCTTCTATTATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050686.10 ENSMUST00000108293.3 ENSMUST00000131145.9 |
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