Pregenerated sensors for TMEM64 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043252Ensembl transcript IDs: ENSMUST00000062684.9
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGGATTTCTCTGGATGTCAGCAGTACCCAGGGCAAAGGTTTTACTaGCAGCAAAAGGCAGCGGAGAGAGCTCTGATAGGTTGGAACAGT | + |
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Preference number: 1 (lower is better) Translates to: RDFSGCQQYPGQRFY*QQKAAERALIGWNS Trigger: ACTGTTCCAACCTATCAGAGCTCTCTCCGCTGCCTTTTGCTGGCAGTAAAACCTTTGCCCTGGGTACTGCTGACATCCAGAGAAATCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 90 bp | ACTGTAGACCAGGTGCCTTTCGTCCCAGTTACTCTGGTCTTCTACTaGTACTCAGAGGCAGAGGGATTTACGCATCAGCAGGGGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: TVDQVPFVPVTLVFY*YSEAEGFTHQQGKE Trigger: TTCCTTCCCCTGCTGATGCGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGACGAAAGGCACCTGGTCTACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 90 bp | GCAGAGGGATTTACGCATCAGCAGGGGAAGGAAAGCCACCTGAACTaGGCAAAAACCTCGTGTGTGAACACAATCAAACTCTTCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: AEGFTHQQGKESHLN*AKTSCVNTIKLFSG Trigger: CCCAGAGAAGAGTTTGATTGTGTTCACACACGAGGTTTTTGCCCAGTTCAGGTGGCTTTCCTTCCCCTGCTGATGCGTAAATCCCTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR TCA 90 bp | ACTGCTTTGCTGTTAGAATTCGGTACTGTAAATCCCAGCCACCTCTaGGAACAGTCTGCAGCAATCACTGTGCAGCTCAGACGTACCAGG | + |
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Preference number: 1 (lower is better) Translates to: TALLLEFGTVNPSHL*EQSAAITVQLRRTR Trigger: CCTGGTACGTCTGAGCTGCACAGTGATTGCTGCAGACTGTTCTCAGAGGTGGCTGGGATTTACAGTACCGAATTCTAACAGCAAAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 90 bp | AATGGCACTCATCTGCCACACAGGAAGGATCTATTTGCACCAATGTaGCACACACCCAGCAGCTTTCAAGAACTGGAAAGATCAGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: NGTHLPHRKDLFAPM*HTPSSFQELERSAS Trigger: TGAGGCTGATCTTTCCAGTTCTTGAAAGCTGCTGGGTGTGTGCCACATTGGTGCAAATAGATCCTTCCTGTGTGGCAGATGAGTGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 90 bp | CTTTTCTGTGAATGGCACTCATCTGCCACACAGGAAGGATCTATTTaGACCAATGTGGCACACACCCAGCAGCTTTCAAGAACTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: LFCEWHSSATQEGSI*TNVAHTQQLSRTGK Trigger: CTTTCCAGTTCTTGAAAGCTGCTGGGTGTGTGCCACATTGGTGCAAATAGATCCTTCCTGTGTGGCAGATGAGTGCCATTCACAGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 90 bp | ACACAATCAAACTCTTCTCTGGGGTTAAGACTAGAAAAATCTGCTTaGGCGGGATTTCTCTGGATGTCAGCAGTACCCAGGGCAAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: TQSNSSLGLRLEKSA*AGFLWMSAVPRAKV Trigger: AACCTTTGCCCTGGGTACTGCTGACATCCAGAGAAATCCCGCGCAAGCAGATTTTTCTAGTCTTAACCCCAGAGAAGAGTTTGATTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 90 bp | GTGAACACAATCAAACTCTTCTCTGGGGTTAAGACTAGAAAAATCTaGTTGCGCGGGATTTCTCTGGATGTCAGCAGTACCCAGGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: VNTIKLFSGVKTRKI*LRGISLDVSSTQGK Trigger: TTTGCCCTGGGTACTGCTGACATCCAGAGAAATCCCGCGCAAGCAGATTTTTCTAGTCTTAACCCCAGAGAAGAGTTTGATTGTGTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 90 bp | GCCCAGGGTACAGGATTAGAGACAGTGAACATGATACAGCTCTGCTaGACAGATTACAGTGAATATAAATATAACCCAGCCACCAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: AQGTGLETVNMIQLC*TDYSEYKYNPATSH Trigger: GTGGCTGGTGGCTGGGTTATATTTATATTCACTGTAATCTGTGCAGCAGAGCTGTATCATGTTCACTGTCTCTAATCCTGTACCCTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 90 bp | ATCTATTTGCACCAATGTGGCACACACCCAGCAGCTTTCAAGAACTaGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTC | + |
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Preference number: 1 (lower is better) Translates to: IYLHQCGTHPAAFKN*KDQPHRQQCKSCNF Trigger: GAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTTCTTGAAAGCTGCTGGGTGTGTGCCACATTGGTGCAAATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGTTACTCTGGTCTTCTACTGCTACTCAGAGGCAGAGGGATTTACGCATCGGGCAAAGGTTTTACTaGCAGCAAAAGGCAGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: SQLLWSSTATQRQRDLRIGQRFY*QQKAAE Trigger: CTCCGCTGCCTTTTGCTGGCAGTAAAACCTTTGCCC...GATGCGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGCAACATAATCTCAGCACCAAGGCCACCAACCCAGTTACAGTTATCTGGAACAGCACTTGTCTCTaGCATCAGGTAAGTGACTGC | + |
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Preference number: 2 (lower is better) Translates to: QLQHNLSTKATNPVTVIWNSTCL*HQVSDC Trigger: GCAGTCACTTACCTGATGGCAGAGACAAGTGCTGTT...CCAGATAACTGTAACTGGGTTGGTGGCCTTGGTGCTGAGATTATGTTGCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGTGCGCGGGATTTCTCTaGATGTCAGCAGTACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRCAGFL*MSAVPR Trigger: CCTGGGTACTGCTGACATCCAGAGAAATCCCGCGCA...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGTTACTCTGGTCTTCTACTGCTACTCAGAGGCAGAGGGATTTACGCATCCTAGAAAAATCTGCTTaGGCGGGATTTCTCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: SQLLWSSTATQRQRDLRILEKSA*AGFLWM Trigger: CATCCAGAGAAATCCCGCGCAAGCAGATTTTTCTAG...GATGCGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGAGAACTTCTGCTGTTGTAAGCCCAGGGTACAGGATTAGAGACAGTGAACTATCGGACAGCCCTTaGATGAGGTCTAATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: CLRTSAVVSPGYRIRDSELSDSP*MRSNGR Trigger: TCTCCCATTAGACCTCATCCAAGGGCTGTCCGATAG...TTCACTGTCTCTAATCCTGTACCCTGGGCTTACAACAGCAGAAGTTCTCAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGCCGATAACAAAGGTCTaGAGGCCAGGCATGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRPITKV*RPGMHC Trigger: ACAGTGCATGCCTGGCCTCCAGACCTTTGTTATCGG...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGCAAGGGGACACTGTATaGGCATTGGGGAAAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRQGDTV*ALGKAT Trigger: AGTGGCTTTCCCCAATGCCCATACAGTGTCCCCTTG...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CAA 90 bp | AACACAATCAAACTCTTCTCTGGGGTTAAGACTAGAAAAATCTGCTaGCGCGGGATTTCTCTGGATGTCAGCAGTACCCAGGGCAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: NTIKLFSGVKTRKIC*RGISLDVSSTQGKG Trigger: ACCTTTGCCCTGGGTACTGCTGACATCCAGAGAAATCCCGCGCAAGCAGATTTTTCTAGTCTTAACCCCAGAGAAGAGTTTGATTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR GCA 90 bp | TTCGTCCCAGTTACTCTGGTCTTCTACTGCTACTCAGAGGCAGAGGGATTTACGAAGACTAGAAAAATCTaGTTGCGCGGGATTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FVPVTLVFYCYSEAEGFTKTRKI*LRGISL Trigger: CAGAGAAATCCCGCGCAAGCAGATTTTTCTAGTCTT...CGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGACGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGCAACATAATCTCAGCACCAAGGCCACCAACCCAGTTACAGTTATCTGGATGGCAATAATGAAGTaGTGTTTCCTGGTACCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QLQHNLSTKATNPVTVIWMAIMK*CFLVPW Trigger: CCAAGGTACCAGGAAACAGCACTTCATTATTGCCAT...CCAGATAACTGTAACTGGGTTGGTGGCCTTGGTGCTGAGATTATGTTGCAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCAAAGGTTTTACTGCCAGCAAAAGGCAGCGGAGAGAGCTCTGATAGGTTGGAGTCAGTTTTGTTTGTaGCATAATACAACAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: GQRFYCQQKAAERALIGWSQFCL*HNTTAL Trigger: AAGTGCTGTTGTATTATGGCACAAACAAAACTGACT...CCAACCTATCAGAGCTCTCTCCGCTGCCTTTTGCTGGCAGTAAAACCTTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR TCA 90 bp | TTCGTCCCAGTTACTCTGGTCTTCTACTGCTACTCAGAGGCAGAGGGATTTACGCATCTACATTTACACTaGCAGACCCAGAAAATGATT | + |
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Preference number: 2 (lower is better) Translates to: FVPVTLVFYCYSEAEGFTHLHLH*QTQKMI Trigger: AATCATTTTCTGGGTCTGTCAGTGTAAATGTAGATG...CGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGACGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGAAGAGTACCACCCTTCTGGAGAGAATaGCTAAGCAAAGAGCATACA | + |
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Preference number: 2 (lower is better) Translates to: ISLTDNNVSHVTSPGRVPPFWRE*LSKEHT Trigger: TGTATGCTCTTTGCTTAGGCATTCTCTCCAGAAGGG...TGGTACTCTTCCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGAACAGTTCACCCTTCTaGAGAGAATGCCTAAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRNSSPF*RECLSK Trigger: TTTGCTTAGGCATTCTCTCCAGAAGGGTGAACTGTT...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CCA 90 bp | TTCGTCCCAGTTACTCTGGTCTTCTACTGCTACTCAGAGGCAGAGGGATTTACGTATAAAAGGGGGAAATaGTTTGGTAAGAGTTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: FVPVTLVFYCYSEAEGFTYKRGK*FGKSCY Trigger: ATAGCAACTCTTACCAAACCATTTCCCCCTTTTATA...CGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGACGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR TCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGCAGAGCTTTTCTGCTTaGAACAAGCAAGTGAACATT | + |
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Preference number: 2 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRQSFSA*NKQVNI Trigger: AATGTTCACTTGCTTGTTTCAAGCAGAAAAGCTCTG...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR GCA 90 bp | AATCGAATAAGAATGCGGGCTCGACTTGTGAGCCACCTGCTAAATAATGTCCCTAAAGCAGAGCTTTTCTaGTTGAAACAAGCAAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: NRIRMRARLVSHLLNNVPKAELF*LKQASE Trigger: TTCACTTGCTTGTTTCAAGCAGAAAAGCTCTGCTTT...AGGGACATTATTTAGCAGGTGGCTCACAAGTCGAGCCCGCATTCTTATTCGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGAGAGCTCTGATAGGTTaGAACAGTCATAGAAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRRALIG*NSHRKV Trigger: CACTTTTCTATGACTGTTCCAACCTATCAGAGCTCT...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 72 bp | ACATGGATCATTCCGAGCCTGGGAGGAGCCTTCAGCTaGAACATAATCTCAGCACCAAGGCCACCAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: TWIIPSLGGAFS*NIISAPRPPTQ Trigger: CTGGGTTGGTGGCCTTGGTGCTGAGATTATGTTGCAGCTGAAGGCTCCTCCCAGGCTCGGAATGATCCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 72 bp | AAGGGGACACTGTATGGGCATTGGGGAAAGCCACTGTaGGACACTAGCAGCTGGGTACAGTGCTTCAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: KGTLYGHWGKPL*DTSSWVQCFKG Trigger: ACCCTTGAAGCACTGTACCCAGCTGCTAGTGTCCCACAGTGGCTTTCCCCAATGCCCATACAGTGTCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 72 bp | CGGTACTGTAAATCCCAGCCACCTCTGAGAACAGTCTaGAGCAATCACTGTGCAGCTCAGACGTACCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: RYCKSQPPLRTV*SNHCAAQTYQV Trigger: GACCTGGTACGTCTGAGCTGCACAGTGATTGCTGCAGACTGTTCTCAGAGGTGGCTGGGATTTACAGTACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 72 bp | CAGGTGCCTTTCGTCCCAGTTACTCTGGTCTTCTACTaGTACTCAGAGGCAGAGGGATTTACGCATCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: QVPFVPVTLVFY*YSEAEGFTHQQ Trigger: CTGCTGATGCGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGACGAAAGGCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 72 bp | CCAGCCACCTCTGAGAACAGTCTGCAGCAATCACTGTaGAGCTCAGACGTACCAGGTCATAACTTAGTTGCA | + |
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Preference number: 3 (lower is better) Translates to: PATSENSLQQSL*SSDVPGHNLVA Trigger: TGCAACTAAGTTATGACCTGGTACGTCTGAGCTGCACAGTGATTGCTGCAGACTGTTCTCAGAGGTGGCTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 72 bp | GAATGGCACTCATCTGCCACACAGGAAGGATCTATTTaGACCAATGTGGCACACACCCAGCAGCTTTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: EWHSSATQEGSI*TNVAHTQQLSR Trigger: TCTTGAAAGCTGCTGGGTGTGTGCCACATTGGTGCAAATAGATCCTTCCTGTGTGGCAGATGAGTGCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR TCA 72 bp | CTGTTAGAATTCGGTACTGTAAATCCCAGCCACCTCTaGGAACAGTCTGCAGCAATCACTGTGCAGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LLEFGTVNPSHL*EQSAAITVQLR Trigger: TCTGAGCTGCACAGTGATTGCTGCAGACTGTTCTCAGAGGTGGCTGGGATTTACAGTACCGAATTCTAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 72 bp | AACTCTTCTCTGGGGTTAAGACTAGAAAAATCTGCTTaGGCGGGATTTCTCTGGATGTCAGCAGTACCCAGG | + |
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Preference number: 3 (lower is better) Translates to: NSSLGLRLEKSA*AGFLWMSAVPR Trigger: CCTGGGTACTGCTGACATCCAGAGAAATCCCGCGCAAGCAGATTTTTCTAGTCTTAACCCCAGAGAAGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 72 bp | ATACATATGGCTGGAGGCAATATGTGTCCAGAGCACTaGTTGAGAACTTCTGCTGTTGTAAGCCCAGGGTAC | + |
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Preference number: 3 (lower is better) Translates to: IHMAGGNMCPEH*LRTSAVVSPGY Trigger: GTACCCTGGGCTTACAACAGCAGAAGTTCTCAAGCAGTGCTCTGGACACATATTGCCTCCAGCCATATGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 72 bp | TTTACGCATCAGCAGGGGAAGGAAAGCCACCTGAACTaGGCAAAAACCTCGTGTGTGAACACAATCAAACTC | + |
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Preference number: 3 (lower is better) Translates to: FTHQQGKESHLN*AKTSCVNTIKL Trigger: GAGTTTGATTGTGTTCACACACGAGGTTTTTGCCCAGTTCAGGTGGCTTTCCTTCCCCTGCTGATGCGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 72 bp | CATCTGCCACACAGGAAGGATCTATTTGCACCAATGTaGCACACACCCAGCAGCTTTCAAGAACTGGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: HLPHRKDLFAPM*HTPSSFQELER Trigger: TCTTTCCAGTTCTTGAAAGCTGCTGGGTGTGTGCCACATTGGTGCAAATAGATCCTTCCTGTGTGGCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CAA 90 bp | CAAAGGTTTTACTGCCAGCAAAAGGCAGCGGAGAGAGCTCTGATAGGTTGGAACAAAGGGGGAAATGGTTaGGTAAGAGTTGCTATCGGA | + |
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Preference number: 3 (lower is better) Translates to: QRFYCQQKAAERALIGWNKGGNG*VRVAIG Trigger: TCCGATAGCAACTCTTACCAAACCATTTCCCCCTTT...GTTCCAACCTATCAGAGCTCTCTCCGCTGCCTTTTGCTGGCAGTAAAACCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CAA 90 bp | GGGCAAAGGTTTTACTGCCAGCAAAAGGCAGCGGAGAGAGCTCTGATAGGTTGGACTAGTCAGTTTTGTTaGTGCCATAATACAACAGCA | + |
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Preference number: 3 (lower is better) Translates to: GQRFYCQQKAAERALIGWTSQFC*CHNTTA Trigger: TGCTGTTGTATTATGGCACAAACAAAACTGACTAGT...CCAACCTATCAGAGCTCTCTCCGCTGCCTTTTGCTGGCAGTAAAACCTTTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 72 bp | TGCCAGCAAAAGGCAGCGGAGAGAGCTCTGATAGGTTaGAACAGTCATAGAAAAGTGAAGTCCTTAACAGAA | + |
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Preference number: 3 (lower is better) Translates to: CQQKAAERALIG*NSHRKVKSLTE Trigger: TTCTGTTAAGGACTTCACTTTTCTATGACTGTTCCAACCTATCAGAGCTCTCTCCGCTGCCTTTTGCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 72 bp | ACATCTAATCTGAGGATCCAGACAATAAATATTACATaGATCATTCCGAGCCTGGGAGGAGCCTTCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TSNLRIQTINIT*IIPSLGGAFSC Trigger: GCAGCTGAAGGCTCCTCCCAGGCTCGGAATGATCCATGTAATATTTATTGTCTGGATCCTCAGATTAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CAA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGGCAGAGCTTTTCTGCTaGAAACAAGCAAGTGAACAT | + |
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Preference number: 3 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRAELFC*KQASEH Trigger: ATGTTCACTTGCTTGTTTCAAGCAGAAAAGCTCTGC...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR GCA 72 bp | AACATTAAACAAAACAGTTCACCCTTCTGGAGAGAATaGCTAAGCAAAGAGCATACAACAAGAGCCATTGCG | + |
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Preference number: 3 (lower is better) Translates to: NIKQNSSPFWRE*LSKEHTTRAIA Trigger: CGCAATGGCTCTTGTTGTATGCTCTTTGCTTAGGCATTCTCTCCAGAAGGGTGAACTGTTTTGTTTAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR-3UTR CAA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGATGAATATGCATTTCTaGAATACATATGGCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRMNMHF*NTYGWR Trigger: CCTCCAGCCATATGTATTCAAGAAATGCATATTCAT...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR TCA 72 bp | AAACAAAGCAGAGCTTTTCTGCTTGAAACAAGCAAGTaGACATTAAACAAAACAGTTCACCCTTCTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: KQSRAFLLETSK*TLNKTVHPSGE Trigger: CTCTCCAGAAGGGTGAACTGTTTTGTTTAATGTTCACTTGCTTGTTTCAAGCAGAAAAGCTCTGCTTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 72 bp | AAGCAAGTGAACATTAAACAAAACAGTTCACCCTTCTaGAGAGAATGCCTAAGCAAAGAGCATACAACAAGA | + |
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Preference number: 3 (lower is better) Translates to: KQVNIKQNSSPF*RECLSKEHTTR Trigger: TCTTGTTGTATGCTCTTTGCTTAGGCATTCTCTCCAGAAGGGTGAACTGTTTTGTTTAATGTTCACTTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CCA 72 bp | ATTTCTATGAATATGCATTTCTTGAATACATATGGCTaGAGGCAATATGTGTCCAGAGCACTGCTTGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: ISMNMHFLNTYG*RQYVSRALLEN Trigger: GTTCTCAAGCAGTGCTCTGGACACATATTGCCTCCAGCCATATGTATTCAAGAAATGCATATTCATAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR GCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGGCCCAGCGGCCCGGCTaGTCCACGACTCCCGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRAQRPG*STTPVR Trigger: TCGGACGGGAGTCGTGGAGCAGCCGGGCCGCTGGGC...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR GCA 90 bp | TTCGTCCCAGTTACTCTGGTCTTCTACTGCTACTCAGAGGCAGAGGGATTTACGTCCGGCACCAACAGGTaGTGCCGAGGCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FVPVTLVFYCYSEAEGFTSGTNR*CRGSSS Trigger: GCTGCTGCTGCCTCGGCAGCACCTGTTGGTGCCGGA...CGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGACGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR TCA 90 bp | GGGCAAAGGTTTTACTGCCAGCAAAAGGCAGCGGAGAGAGCTCTGATAGGTTGGGGAAGGAGACCACGATaGAGCCCACGACGAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GQRFYCQQKAAERALIGWGRRPR*SPRRRA Trigger: TGCTCTTCGTCGTGGGCTTCATCGTGGTCTCCTTCC...CCAACCTATCAGAGCTCTCTCCGCTGCCTTTTGCTGGCAGTAAAACCTTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR TCA 90 bp | AATCGAATAAGAATGCGGGCTCGACTTGTGAGCCACCTGCTAAATAATGTCCCTGGACGCCCACCACCATaGGCCCCATGCCTAGCACGA | + |
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Preference number: 4 (lower is better) Translates to: NRIRMRARLVSHLLNNVPGRPPP*APCLAR Trigger: TCGTGCTAGGCATGGGGCTCATGGTGGTGGGCGTCC...AGGGACATTATTTAGCAGGTGGCTCACAAGTCGAGCCCGCATTCTTATTCGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR GCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGGGCACCAACAGGTGCTaGCGAGGCAGCAGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRGTNRC*RGSSSA Trigger: GGCGCTGCTGCTGCCTCGGCAGCACCTGTTGGTGCC...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR TCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGCAGCCACCCAGGCGGTaGGTAGCCGCTTGCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: NWKDQPHRQQCKSCNFPRQPPRR*VAACRP Trigger: TGGTCTGCAAGCGGCTACTCACCGCCTGGGTGGCTG...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR TCA 90 bp | CAAAGGTTTTACTGCCAGCAAAAGGCAGCGGAGAGAGCTCTGATAGGTTGGAACCGCTTGCAGACCACATaGGCGATAAAGGTGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: QRFYCQQKAAERALIGWNRLQTT*AIKVPM Trigger: CATTGGCACCTTTATCGCTCATGTGGTCTGCAAGCG...GTTCCAACCTATCAGAGCTCTCTCCGCTGCCTTTTGCTGGCAGTAAAACCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR CCA 90 bp | AACTGGAAAGATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGGAAGCCCAAAAGGTATaGGAGTCAGCCGGGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: NWKDQPHRQQCKSCNFPREAQKV*ESAGPA Trigger: CGCTGGCCCGGCTGACTCCCATACCTTTTGGGCTTC...CCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGATCTTTCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CAA 72 bp | CATATGGCTGGAGGCAATATGTGTCCAGAGCACTGCTaGAGAACTTCTGCTGTTGTAAGCCCAGGGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: HMAGGNMCPEHC*RTSAVVSPGYR Trigger: CCTGTACCCTGGGCTTACAACAGCAGAAGTTCTCAAGCAGTGCTCTGGACACATATTGCCTCCAGCCATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR TCA 90 bp | TTCGTCCCAGTTACTCTGGTCTTCTACTGCTACTCAGAGGCAGAGGGATTTACGCCACTGGGATCCGATTaGTTGCCTTTAACCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: FVPVTLVFYCYSEAEGFTPLGSD*LPLTRE Trigger: CTCTCTGGTTAAAGGCAATCAATCGGATCCCAGTGG...CGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGACGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR TCA 90 bp | CAAAGGTTTTACTGCCAGCAAAAGGCAGCGGAGAGAGCTCTGATAGGTTGGAACCACCTCCAGAAAACGTaGGGGTCCTCTTGTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QRFYCQQKAAERALIGWNHLQKT*GSSCCR Trigger: TCTACAACAAGAGGACCCTCACGTTTTCTGGAGGTG...GTTCCAACCTATCAGAGCTCTCTCCGCTGCCTTTTGCTGGCAGTAAAACCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR CCA 90 bp | CAAAGGTTTTACTGCCAGCAAAAGGCAGCGGAGAGAGCTCTGATAGGTTGGAACAGAAGGAAGAGCCACTaGGATCCGATTGATTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QRFYCQQKAAERALIGWNRRKSH*DPIDCL Trigger: AAGGCAATCAATCGGATCCCAGTGGCTCTTCCTTCT...GTTCCAACCTATCAGAGCTCTCTCCGCTGCCTTTTGCTGGCAGTAAAACCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR GCA 90 bp | TTCGTCCCAGTTACTCTGGTCTTCTACTGCTACTCAGAGGCAGAGGGATTTACGACAAGCTACAATAGCTaGATTCAATTCCACTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FVPVTLVFYCYSEAEGFTTSYNS*IQFHLS Trigger: GCTCAAGTGGAATTGAATGCAGCTATTGTAGCTTGT...CGTAAATCCCTCTGCCTCTGAGTAGCAGTAGAAGACCAGAGTAACTGGGACGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CAA 72 bp | ACAGGTGTGATGCTGTGTGCGCCTCAACCATTTAGTTaGTTTACAGTGAGGGCAAACAAACTGAATTCCACA | + |
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Preference number: 4 (lower is better) Translates to: TGVMLCAPQPFS*FTVRANKLNST Trigger: TGTGGAATTCAGTTTGTTTGCCCTCACTGTAAACAAACTAAATGGTTGAGGCGCACACAGCATCACACCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR GCA 90 bp | TGCTTGAGAACTTCTGCTGTTGTAAGCCCAGGGTACAGGATTAGAGACAGTGAAAGTAATCGAAAACACTaGATTCTGAAGCCCAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: CLRTSAVVSPGYRIRDSESNRKH*ILKPKR Trigger: CCTTTTGGGCTTCAGAATGCAGTGTTTTCGATTACT...TTCACTGTCTCTAATCCTGTACCCTGGGCTTACAACAGCAGAAGTTCTCAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| 3UTR CAA 72 bp | ATTTGGGACACCAATTTTCAAGACATTATAACTGCTTaGCTGTTAGAATTCGGTACTGTAAATCCCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: IWDTNFQDIITA*LLEFGTVNPSH Trigger: GTGGCTGGGATTTACAGTACCGAATTCTAACAGCAAAGCAGTTATAATGTCTTGAAAATTGGTGTCCCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS GCA 90 bp | GAGCGGTCCCCTCCCGCTGTCCGCTCCGGTGCCCAGCGGCCCGGCTaGTCCACGACTCCCGTCCGACCGGCGTGCTGCAAGGCCCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ERSPPAVRSGAQRPG*STTPVRPACCKARG Trigger: GCCCCGGGCCTTGCAGCACGCCGGTCGGACGGGAGTCGTGGAGCAGCCGGGCCGCTGGGCACCGGAGCGGACAGCGGGAGGGGACCGCTC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS CCA 90 bp | CCTCCCTCCACGACGCGGATAACGGCGCTCAGCTTGTCGCTGTTCTaGATCCTGGCAGCCACCCAGGCGGTGAGTAGCCGCTTGCAGACC | + |
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Preference number: 5 (lower is better) Translates to: PPSTTRITALSLSLF*ILAATQAVSSRLQT Trigger: GGTCTGCAAGCGGCTACTCACCGCCTGGGTGGCTGCCAGGATCCAGAACAGCGACAAGCTGAGCGCCGTTATCCGCGTCGTGGAGGGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS TCA 90 bp | ATCCTGGCAGCCACCCAGGCGGTGAGTAGCCGCTTGCAGACCACATaGGCGATAAAGGTGCCAATGAGGACGCCCACCACCATGAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: ILAATQAVSSRLQTT*AIKVPMRTPTTMSP Trigger: GGGGCTCATGGTGGTGGGCGTCCTCATTGGCACCTTTATCGCTCATGTGGTCTGCAAGCGGCTACTCACCGCCTGGGTGGCTGCCAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS TCA 90 bp | GGTTCCCAAGTAAGAATTCAGAAGCTGAGTCGGGAGCAGCCCAGCTaGAGACGCCATCAGGTAGCTGGGCAAGGGGACGTCAGTAATCGA | + |
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Preference number: 5 (lower is better) Translates to: GSQVRIQKLSREQPS*RRHQVAGQGDVSNR Trigger: TCGATTACTGACGTCCCCTTGCCCAGCTACCTGATGGCGTCTTCAGCTGGGCTGCTCCCGACTCAGCTTCTGAATTCTTACTTGGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR CAA 90 bp | TGCTTGAGAACTTCTGCTGTTGTAAGCCCAGGGTACAGGATTAGAGACAGTGAAATAACGGCGCTCAGCTaGTCGCTGTTCTGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: CLRTSAVVSPGYRIRDSEITALS*SLFWIL Trigger: CAGGATCCAGAACAGCGACAAGCTGAGCGCCGTTAT...TTCACTGTCTCTAATCCTGTACCCTGGGCTTACAACAGCAGAAGTTCTCAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR CAA 90 bp | CAGCTGCAACATAATCTCAGCACCAAGGCCACCAACCCAGTTACAGTTATCTGGATAGCCACTAAGACTTaGTTCTGCGATGACATCTTC | + |
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Preference number: 5 (lower is better) Translates to: QLQHNLSTKATNPVTVIWIATKT*FCDDIF Trigger: GAAGATGTCATCGCAGAACAAAGTCTTAGTGGCTAT...CCAGATAACTGTAACTGGGTTGGTGGCCTTGGTGCTGAGATTATGTTGCAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR CAA 90 bp | ATCAGCCTCACAGACAACAATGTAAGTCATGTAACTTCCCCAGGAAGAGTACCAGCCACTGGGATCCGATaGATTGCCTTTAACCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: ISLTDNNVSHVTSPGRVPATGIR*IAFNQR Trigger: TCTCTGGTTAAAGGCAATCAATCGGATCCCAGTGGC...TGGTACTCTTCCTGGGGAAGTTACATGACTTACATTGTTGTCTGTGAGGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS-3UTR CAA 90 bp | AATCGAATAAGAATGCGGGCTCGACTTGTGAGCCACCTGCTAAATAATGTCCCTTGCATTCAATTCCACTaGAGCGCGATGGACTACATA | + |
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Preference number: 5 (lower is better) Translates to: NRIRMRARLVSHLLNNVPCIQFH*SAMDYI Trigger: TATGTAGTCCATCGCGCTCAAGTGGAATTGAATGCA...AGGGACATTATTTAGCAGGTGGCTCACAAGTCGAGCCCGCATTCTTATTCGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS GCA 72 bp | GTCCTCCGAGCGGTCCCCTCCCGCTGTCCGCTCCGGTaGCCAGCGGCCCGGCTGCTCCACGACTCCCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VLRAVPSRCPLR*PAARLLHDSRP Trigger: CGGACGGGAGTCGTGGAGCAGCCGGGCCGCTGGGCACCGGAGCGGACAGCGGGAGGGGACCGCTCGGAGGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS CAA 72 bp | CTTCCTCCCTCCACGACGCGGATAACGGCGCTCAGCTaGTCGCTGTTCTGGATCCTGGCAGCCACCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: LPPSTTRITALS*SLFWILAATQA Trigger: CGCCTGGGTGGCTGCCAGGATCCAGAACAGCGACAAGCTGAGCGCCGTTATCCGCGTCGTGGAGGGAGGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS CAA 90 bp | TTCAGGCCGCTTCCTCCCTCCACGACGCGGATAACGGCGCTCAGCTaGTCGCTGTTCTGGATCCTGGCAGCCACCCAGGCGGTGAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: FRPLPPSTTRITALS*SLFWILAATQAVSS Trigger: GCTACTCACCGCCTGGGTGGCTGCCAGGATCCAGAACAGCGACAAGCTGAGCGCCGTTATCCGCGTCGTGGAGGGAGGAAGCGGCCTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS TCA 72 bp | CGATGTAGCCCCAACCGCAGGGGAAGGAGACCACGATaGAGCCCACGACGAAGAGCAGGACACCGAGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RCSPNRRGRRPR*SPRRRAGHRAA Trigger: CGCTGCTCGGTGTCCTGCTCTTCGTCGTGGGCTTCATCGTGGTCTCCTTCCCCTGCGGTTGGGGCTACATCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS TCA 72 bp | GCCACCCAGGCGGTGAGTAGCCGCTTGCAGACCACATaGGCGATAAAGGTGCCAATGAGGACGCCCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: ATQAVSSRLQTT*AIKVPMRTPTT Trigger: GGTGGTGGGCGTCCTCATTGGCACCTTTATCGCTCATGTGGTCTGCAAGCGGCTACTCACCGCCTGGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS CAA 72 bp | CCTCTTGTTGTAGAAGGAAGAGCCACTGGGATCCGATaGATTGCCTTTAACCAGAGAGGTTTTCAGTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PLVVEGRATGIR*IAFNQRGFQFH Trigger: ATGGAACTGAAAACCTCTCTGGTTAAAGGCAATCAATCGGATCCCAGTGGCTCTTCCTTCTACAACAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS GCA 72 bp | AGAGGTTTTCAGTTCCATCTCACAAGCTACAATAGCTaGATTCAATTCCACTTGAGCGCGATGGACTACATA | + |
|
Preference number: 6 (lower is better) Translates to: RGFQFHLTSYNS*IQFHLSAMDYI Trigger: TATGTAGTCCATCGCGCTCAAGTGGAATTGAATGCAGCTATTGTAGCTTGTGAGATGGAACTGAAAACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS CAA 72 bp | CATCTCACAAGCTACAATAGCTGCATTCAATTCCACTaGAGCGCGATGGACTACATAAAACATGAGGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: HLTSYNSCIQFH*SAMDYIKHEAN Trigger: ATTGGCCTCATGTTTTATGTAGTCCATCGCGCTCAAGTGGAATTGAATGCAGCTATTGTAGCTTGTGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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| CDS CAA 90 bp | TTTCAGTTCCATCTCACAAGCTACAATAGCTGCATTCAATTCCACTaGAGCGCGATGGACTACATAAAACATGAGGCCAATGCTTATAAC | + |
|
Preference number: 6 (lower is better) Translates to: FQFHLTSYNSCIQFH*SAMDYIKHEANAYN Trigger: GTTATAAGCATTGGCCTCATGTTTTATGTAGTCCATCGCGCTCAAGTGGAATTGAATGCAGCTATTGTAGCTTGTGAGATGGAACTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062684.9 |
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