Pregenerated sensors for TMEM62 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054484Ensembl transcript IDs: ENSMUST00000067582.14, ENSMUST00000110686.3, ENSMUST00000139428.8
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTaGAGGCTGGACTTCTTCCAGGCTGCTAGCTGTAAGCCATGGACT | + |
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Preference number: 1 (lower is better) Translates to: LAFPSATGQRSEPQM*RLDFFQAASCKPWT Trigger: AGTCCATGGCTTACAGCTAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR CCA 90 bp | TCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTaGACTTCTTCCAGGCTGCTAGCTGTAAGCCATGGACTTCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SHLPQGRDLSHKCGG*TSSRLLAVSHGLQE Trigger: CTCCTGAAGTCCATGGCTTACAGCTAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| 3UTR CCA 90 bp | CATGTAAGTCTGTGCACATATGAATGTAGGTGCCCACAGTGGCTCTaGCCTGGAGCTAGAGTTACAGGCAGTTGTGAGCATCTGACATGG | + |
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Preference number: 1 (lower is better) Translates to: HVSLCTYECRCPQWL*PGARVTGSCEHLTW Trigger: CCATGTCAGATGCTCACAACTGCCTGTAACTCTAGCTCCAGGCCAGAGCCACTGTGGGCACCTACATTCATATGTGCACAGACTTACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| 3UTR TCA 90 bp | AGTAAACATTTCCAACATTCAGATGTCCAAGGAGTGACTGCTTCCTaGAGCTCACCCACTGATACTGGCTTTCCCATCTGCCACAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: SKHFQHSDVQGVTAS*SSPTDTGFPICHRA Trigger: TGCCCTGTGGCAGATGGGAAAGCCAGTATCAGTGGGTGAGCTTCAGGAAGCAGTCACTCCTTGGACATCTGAATGTTGGAAATGTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR TCA 90 bp | TCTTCCAGGCTGCTAGCTGTAAGCCATGGACTTCAGGAGCTCAGATaGCTTTTTAACTGCACCATGAATATTCCAAGTTCAGTGGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SSRLLAVSHGLQELR*LFNCTMNIPSSVEF Trigger: GAACTCCACTGAACTTGGAATATTCATGGTGCAGTTAAAAAGTCATCTGAGCTCCTGAAGTCCATGGCTTACAGCTAGCAGCCTGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| 3UTR TCA 90 bp | ATTGAACTCGGGTCTTCTGGAGGTAAAGTACATGCTCTTAACCACTaGTCTCTCCAACCCATTGTTTATGGCTACCATTCATTCATTTAT | + |
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Preference number: 1 (lower is better) Translates to: IELGSSGGKVHALNH*SLQPIVYGYHSFIY Trigger: ATAAATGAATGAATGGTAGCCATAAACAATGGGTTGGAGAGATCAGTGGTTAAGAGCATGTACTTTACCTCCAGAAGACCCGAGTTCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| 3UTR GCA 90 bp | AATGTCCATCAACAAATATCCCAAATGAAAAGCAGCAACCCAATTTaGCATCAATTATCTCACCAACAAACCATGGTCCCAGCACTGTAT | + |
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Preference number: 1 (lower is better) Translates to: NVHQQISQMKSSNPI*HQLSHQQTMVPALY Trigger: ATACAGTGCTGGGACCATGGTTTGTTGGTGAGATAATTGATGGCAAATTGGGTTGCTGCTTTTCATTTGGGATATTTGTTGATGGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| 3UTR GCA 90 bp | AAGAACACCAGCTGTATAATTCCATTTATAAATGTTAGACCACCTTaGAGGAAATGTCCATCAACAAATATCCCAAATGAAAAGCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: KNTSCIIPFINVRPP*RKCPSTNIPNEKQQ Trigger: TTGCTGCTTTTCATTTGGGATATTTGTTGATGGACATTTCCTGCAAGGTGGTCTAACATTTATAAATGGAATTATACAGCTGGTGTTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTGTAGGTGCCCACAGTaGCTCTGGCCTGGAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: AFPSATGQRSEPQMWRLDCRCPQ*LWPGAR Trigger: TCTAGCTCCAGGCCAGAGCCACTGTGGGCACCTACA...GTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAAAGCCCATGATCGGTGGGGAAACAGGCTGGGAAGTCAAGTCTCAGGAGCACAGGGCAGAGATCTaGGCCACAAATGTGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SRKPMIGGETGWEVKSQEHRAEI*ATNVEA Trigger: AGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTG...CTCCTGAGACTTGACTTCCCAGCCTGTTTCCCCACCGATCATGGGCTTTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACAAAGCCCATGATCGGTaGGGAAACAGGCTGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: AFPSATGQRSEPQMWRLDKAHDR*GNRLGS Trigger: ACTTCCCAGCCTGTTTCCCCACCGATCATGGGCTTT...GTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACAGTTACAGGCAGTTGTaGGCATCTGACATGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: AFPSATGQRSEPQMWRLDSYRQL*ASDMVA Trigger: AGCAACCATGTCAGATGCTCACAACTGCCTGTAACT...GTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCTCACCCACTGATACTGGCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCACAAATGTGGAGGCTaGACTTCTTCCAGGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: EAHPLILAFPSATGQRSEHKCGG*TSSRLL Trigger: TAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTG...CTCAGATCTCTGCCCTGTGGCAGATGGGAAAGCCAGTATCAGTGGGTGAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTGTGAGCATCTGACATaGTTGCTAGGGATTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: AFPSATGQRSEPQMWRLDCEHLT*LLGIEL Trigger: GAGTTCAATCCCTAGCAACCATGTCAGATGCTCACA...GTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTGATTAGGGCTCTTTaGCTCCTGAGGAAGAATCAA | + |
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Preference number: 2 (lower is better) Translates to: AFPSATGQRSEPQMWRLDLIRAL*LLRKNQ Trigger: TTGATTCTTCCTCAGGAGGCAAAGAGCCCTAATCAA...GTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTATATTCCAAGTTCAGTaGAGTTCAATGTCCACACAC | + |
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Preference number: 2 (lower is better) Translates to: LSHLPQGRDLSHKCGGWTIFQVQ*SSMSTH Trigger: GTGTGTGGACATTGAACTCCACTGAACTTGGAATAT...AGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACACACAGGGCAGAGATCTaGGCCACAAATGTGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTHRAEI*ATNVEA Trigger: AGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTG...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGTACCAAGGGACACAGTaGCACAGAGACCCCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: PEEESIVRLFCSPHSKNQYQGTQ*HRDPTV Trigger: CACAGTGGGGTCTCTGTGTCACTGTGTCCCTTGGTA...CTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR GCA 90 bp | GATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGTGTCCAAGGAGTGACTaGTTCCTGAAGCTCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DAFHRMTLINTVVPRDTVCPRSD*FLKLTH Trigger: GTGGGTGAGCTTCAGGAAGCAGTCACTCCTTGGACA...CACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGTGTCCAAGGAGTGACTaGTTCCTGAAGCTCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: PEEESIVRLFCSPHSKNQCPRSD*FLKLTH Trigger: GTGGGTGAGCTTCAGGAAGCAGTCACTCCTTGGACA...CTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR CCA 90 bp | GATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGCACAAATGTGGAGGCTaGACTTCTTCCAGGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: DAFHRMTLINTVVPRDTVHKCGG*TSSRLL Trigger: TAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTG...CACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAGTGACTGGTGGAGATGAGACCTaGAGCTGTGACCAAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TARISSKHFQHSDVQGVTGGDET*SCDQSS Trigger: GCTGCTTTGGTCACAGCTTCAGGTCTCATCTCCACC...AGTCACTCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| 3UTR-3UTR GCA 90 bp | CGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGATTGATTAGGGCTCTTTaGCTCCTGAGGAAGAATCAA | + |
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Preference number: 2 (lower is better) Translates to: RAGCFSQDDPNKHSSTKGLIRAL*LLRKNQ Trigger: TTGATTCTTCCTCAGGAGGCAAAGAGCCCTAATCAA...TCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGCACAAATGTGGAGGCTaGACTTCTTCCAGGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: PEEESIVRLFCSPHSKNQHKCGG*TSSRLL Trigger: TAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTG...CTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAGTGACTGGAGTGACTGCTTCCTaGAGCTCACCCACTGATACT | + |
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Preference number: 2 (lower is better) Translates to: TARISSKHFQHSDVQGVTGVTAS*SSPTDT Trigger: AGTATCAGTGGGTGAGCTTCAGGAAGCAGTCACTCC...AGTCACTCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAGTGACTTGTCCAAGGAGTGACTaGTTCCTGAAGCTCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: TARISSKHFQHSDVQGVTCPRSD*FLKLTH Trigger: GTGGGTGAGCTTCAGGAAGCAGTCACTCCTTGGACA...AGTCACTCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR CAA 90 bp | GCAATCTTCTTGATTAGGGCTCTTTGCCTCCTGAGGAAGAATCAATaGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGTAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: AIFLIRALCLLRKNQ*LDFSAVHTARISSK Trigger: TTTACTACTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAGGAGGCAAAGAGCCCTAATCAAGAAGATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACAAGCAGCAACCCAATTTaGCATCAATTATCTCACCAA | + |
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Preference number: 2 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTSSNPI*HQLSHQ Trigger: TTGGTGAGATAATTGATGGCAAATTGGGTTGCTGCT...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| 3UTR CAA 90 bp | AAATGTCCATCAACAAATATCCCAAATGAAAAGCAGCAACCCAATTaGCCATCAATTATCTCACCAACAAACCATGGTCCCAGCACTGTA | + |
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Preference number: 2 (lower is better) Translates to: KCPSTNIPNEKQQPN*PSIISPTNHGPSTV Trigger: TACAGTGCTGGGACCATGGTTTGTTGGTGAGATAATTGATGGCAAATTGGGTTGCTGCTTTTCATTTGGGATATTTGTTGATGGACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCACACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAAAATGTGGTCATATTTaGAAATCCCAGAGGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: VHTARISSKHFQHSDVQGKCGHI*KSQRFF Trigger: AAAGAACCTCTGGGATTTGCAAATATGACCACATTT...TCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGTGTGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| 3UTR CCA 72 bp | CCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTaGACTTCTTCCAGGCTGCTAGCTGTAAGCCATGGA | + |
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Preference number: 3 (lower is better) Translates to: PQGRDLSHKCGG*TSSRLLAVSHG Trigger: TCCATGGCTTACAGCTAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR CCA 72 bp | CCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTaGAGGCTGGACTTCTTCCAGGCTGCTAGCTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: PSATGQRSEPQM*RLDFFQAASCK Trigger: CTTACAGCTAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR CCA 72 bp | CAACCTTGGCTAAGGAAGCAGAAAGCCCATGATCGGTaGGGAAACAGGCTGGGAAGTCAAGTCTCAGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: QPWLRKQKAHDR*GNRLGSQVSGA Trigger: TGCTCCTGAGACTTGACTTCCCAGCCTGTTTCCCCACCGATCATGGGCTTTCTGCTTCCTTAGCCAAGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACACTGTGGCAATCTTCTaGATTAGGGCTCTTTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: AFPSATGQRSEPQMWRLDTVAIF*IRALCL Trigger: GAGGCAAAGAGCCCTAATCAAGAAGATTGCCACAGT...GTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR CCA 72 bp | CTGTGCACATATGAATGTAGGTGCCCACAGTGGCTCTaGCCTGGAGCTAGAGTTACAGGCAGTTGTGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LCTYECRCPQWL*PGARVTGSCEH Trigger: ATGCTCACAACTGCCTGTAACTCTAGCTCCAGGCCAGAGCCACTGTGGGCACCTACATTCATATGTGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| 3UTR TCA 72 bp | CCAGGACAAGTTTCCACAGGCTCCCTAGGCAGAAAATaGCATCCTGAACTCCAAGTTCGGGCTGGATGCTTT | + |
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Preference number: 3 (lower is better) Translates to: PGQVSTGSLGRK*HPELQVRAGCF Trigger: AAAGCATCCAGCCCGAACTTGGAGTTCAGGATGTCATTTTCTGCCTAGGGAGCCTGTGGAAACTTGTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR CCA 72 bp | GGAGCTAGAGTTACAGGCAGTTGTGAGCATCTGACATaGTTGCTAGGGATTGAACTCGGGTCTTCTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: GARVTGSCEHLT*LLGIELGSSGG Trigger: ACCTCCAGAAGACCCGAGTTCAATCCCTAGCAACCATGTCAGATGCTCACAACTGCCTGTAACTCTAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| 3UTR CCA 72 bp | GTAAGTCTGTGCACATATGAATGTAGGTGCCCACAGTaGCTCTGGCCTGGAGCTAGAGTTACAGGCAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: VSLCTYECRCPQ*LWPGARVTGSC Trigger: ACAACTGCCTGTAACTCTAGCTCCAGGCCAGAGCCACTGTGGGCACCTACATTCATATGTGCACAGACTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTGATCTCTCCAACCCATaGTTTATGGCTACCATTCAT | + |
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Preference number: 3 (lower is better) Translates to: LSHLPQGRDLSHKCGGWTDLSNP*FMATIH Trigger: ATGAATGGTAGCCATAAACAATGGGTTGGAGAGATC...AGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| 3UTR TCA 72 bp | TTCCAACATTCAGATGTCCAAGGAGTGACTGCTTCCTaGAGCTCACCCACTGATACTGGCTTTCCCATCTGC | + |
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Preference number: 3 (lower is better) Translates to: FQHSDVQGVTAS*SSPTDTGFPIC Trigger: GCAGATGGGAAAGCCAGTATCAGTGGGTGAGCTTCAGGAAGCAGTCACTCCTTGGACATCTGAATGTTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR TCA 72 bp | AGTTTCCACAGGCTCCCTAGGCAGAAAATGACATCCTaGACTCCAAGTTCGGGCTGGATGCTTTTCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: SFHRLPRQKMTS*TPSSGWMLFTG Trigger: TCCTGTGAAAAGCATCCAGCCCGAACTTGGAGTTCAGGATGTCATTTTCTGCCTAGGGAGCCTGTGGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTCTGAGGAAGAATCAATaGTTAGACTTTTCTGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: LSHLPQGRDLSHKCGGWTLRKNQ*LDFSAV Trigger: GACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAG...AGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCACTGTGGCAATCTTCTaGATTAGGGCTCTTTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: QVRAGCFSQDDPNKHSSTTVAIF*IRALCL Trigger: GAGGCAAAGAGCCCTAATCAAGAAGATTGCCACAGT...GGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| 3UTR-3UTR CAA 90 bp | GATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACTGTGGCAATCTTCTaGATTAGGGCTCTTTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DAFHRMTLINTVVPRDTVTVAIF*IRALCL Trigger: GAGGCAAAGAGCCCTAATCAAGAAGATTGCCACAGT...CACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| 3UTR TCA 72 bp | GTAGTAAACATTTCCAACATTCAGATGTCCAAGGAGTaGCTGCTTCCTGAAGCTCACCCACTGATACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VVNISNIQMSKE*LLPEAHPLILA Trigger: AGCCAGTATCAGTGGGTGAGCTTCAGGAAGCAGTCACTCCTTGGACATCTGAATGTTGGAAATGTTTACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGCTGAGGAAGAATCAATaGTTAGACTTTTCTGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: DAFHRMTLINTVVPRDTVLRKNQ*LDFSAV Trigger: GACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAG...CACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| 3UTR TCA 72 bp | GACTTCAGGAGCTCAGATGACTTTTTAACTGCACCATaGATATTCCAAGTTCAGTGGAGTTCAATGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: DFRSSDDFLTAP*IFQVQWSSMST Trigger: TGTGGACATTGAACTCCACTGAACTTGGAATATTCATGGTGCAGTTAAAAAGTCATCTGAGCTCCTGAAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
||
| 3UTR TCA 72 bp | ACCTTGCAGGAAATGTCCATCAACAAATATCCCAAATaGAAAGCAGCAACCCAATTTGCCATCAATTATCTC | + |
|
Preference number: 3 (lower is better) Translates to: TLQEMSINKYPK*KAATQFAINYL Trigger: GAGATAATTGATGGCAAATTGGGTTGCTGCTTTTCATTTGGGATATTTGTTGATGGACATTTCCTGCAAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAAGCCCATGATCGGTGGGGAAACAGGCTGGGAAGTCAAGTCTCAGGAGGGGTCTCTTAGGCCCTaGCCTTTGGGTGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRKPMIGGETGWEVKSQEGSLRP*PLGGIH Trigger: GTGGATGCCACCCAAAGGCCAGGGCCTAAGAGACCC...CTCCTGAGACTTGACTTCCCAGCCTGTTTCCCCACCGATCATGGGCTTTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTGTTAGGCCCTGGCCTTTaGGTGGCATCCACAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PQGRDLSHKCGGWTSSRLLGPGL*VASTEM Trigger: CATCTCTGTGGATGCCACCCAAAGGCCAGGGCCTAA...CAGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAAGCCCATGATCGGTGGGGAAACAGGCTGGGAAGTCAAGTCTCAGGAGATAGGACCAGACAAGTaGGAAGCCTGGCCTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: SRKPMIGGETGWEVKSQEIGPDK*EAWPIS Trigger: TGATATAGGCCAGGCTTCTCACTTGTCTGGTCCTAT...CTCCTGAGACTTGACTTCCCAGCCTGTTTCCCCACCGATCATGGGCTTTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | CGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACTGTCAGGTCTCCAGTaGCCAGGACAAGAGCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RAGCFSQDDPNKHSSTKGLSGLQ*PGQEPV Trigger: AACCGGCTCTTGTCCTGGCCACTGGAGACCTGACAG...TCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | GCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTATCAGTGTGGTGAGCTaGATCAGCACAATCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ATGQRSEPQMWRLDFFQAISVVS*ISTINT Trigger: TGTGTTGATTGTGCTGATCCAGCTCACCACACTGAT...AGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR TCA 90 bp | CACCCACTGATACTGGCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAAGGACAAGAGCCGGTTaGATGATGTCAATAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPLILAFPSATGQRSEPQRTRAG*MMSIVS Trigger: GGAAACTATTGACATCATTCAACCGGCTCTTGTCCT...TTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGCCAGTATCAGTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | CACCCACTGATACTGGCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAGCAGAAAATATGTGGTaGGCAGTCCTACTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPLILAFPSATGQRSEPQAENMW*AVLLLP Trigger: TGGAAGAAGTAGGACTGCTCACCACATATTTTCTGC...TTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGCCAGTATCAGTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTAGTTGCCAAAGGGAGTaGTGTGGATGTGATGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLPQGRDLSHKCGGWTSCQRE*CGCDEK Trigger: CTTTTCATCACATCCACAGCACTCCCTTTGGCAACT...AGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTGCTAGCTAGTGTTCCTTTGTTTTaGCATCTGTCAGGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRDLSHKCGGWTSSRLLASVPLF*HLSGLQ Trigger: CTGGAGACCTGACAGATGCCAAAACAAAGGAACACT...AGCTAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | GCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTACTTCCTGTAATAATTaGCGATGCTCTCCAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATGQRSEPQMWRLDFFQATSCNN*RCSPDL Trigger: CAAGTCTGGAGAGCATCGCCAATTATTACAGGAAGT...AGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAGGGTCTCTTAGGCCCTaGCCTTTGGGTGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KFGLDAFHRMTLINTVVPGSLRP*PLGGIH Trigger: GTGGATGCCACCCAAAGGCCAGGGCCTAAGAGACCC...TGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACCTTCCAGCAGAATCCTaGACGAATACTTCTATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AFPSATGQRSEPQMWRLDLPAES*TNTSMV Trigger: TACCATAGAAGTATTCGTCCAGGATTCTGCTGGAAG...GTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | CACCCACTGATACTGGCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAACTCACCAACAAACCATaGTCCCAGCACTGTATACAA | + |
|
Preference number: 4 (lower is better) Translates to: HPLILAFPSATGQRSEPQLTNKP*SQHCIQ Trigger: TTGTATACAGTGCTGGGACCATGGTTTGTTGGTGAG...TTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGCCAGTATCAGTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR GCA 90 bp | GCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTTCTGGTTGCTCTGACTaGTTTTCTTGGAAAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ATGQRSEPQMWRLDFFQASGCSD*FSWKTL Trigger: TAGAGTTTTCCAAGAAAAGCAGTCAGAGCAACCAGA...AGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTGTCAAAGGTTACATCTaGAAAGCTAAAGAGGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLPQGRDLSHKCGGWTVKGYI*KAKEVV Trigger: CACGACCTCTTTAGCTTTGCAGATGTAACCTTTGAC...AGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTACTTCCTGTAATAATTaGCGATGCTCTCCAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLPQGRDLSHKCGGWTTSCNN*RCSPDL Trigger: CAAGTCTGGAGAGCATCGCCAATTATTACAGGAAGT...AGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCCAAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTTTAGGCCCTGGCCTTTaGGTGGCATCCACAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELQVRAGCFSQDDPNKHSLGPGL*VASTEM Trigger: CATCTCTGTGGATGCCACCCAAAGGCCAGGGCCTAA...ACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTTGGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTCTTCCAGCAGAATCCTaGACGAATACTTCTATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLPQGRDLSHKCGGWTLPAES*TNTSMV Trigger: TACCATAGAAGTATTCGTCCAGGATTCTGCTGGAAG...AGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR TCA 90 bp | GCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTAGTAAGGAGGATAAATaGTGCCAAAGGATCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ATGQRSEPQMWRLDFFQASKEDK*CQRIKC Trigger: ACATTTGATCCTTTGGCATCATTTATCCTCCTTACT...AGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAGGTGGAGATGAGACCTaGAGCTGTGACCAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KFGLDAFHRMTLINTVVPGGDET*SCDQSS Trigger: GCTGCTTTGGTCACAGCTTCAGGTCTCATCTCCACC...TGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCAGAAAGCCCATGATCGGTGGGGAAACAGGCTGGGAAGTCAAGTCTCACTGGATCTTGAAATCTaGTCAGGTGAATGTCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RKQKAHDRWGNRLGSQVSLDLEI*SGECRI Trigger: TATCCGACATTCACCTGAGCAGATTTCAAGATCCAG...TGAGACTTGACTTCCCAGCCTGTTTCCCCACCGATCATGGGCTTTCTGCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGAGCAGTAAAGGTCCAGGACAAGTTTCCACAGGCTCCCTAGGCAGAAAAACCAAATCGTCTGGTTaGTCTGACTGCTTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSSKGPGQVSTGSLGRKTKSSG*SDCFSW Trigger: CCAAGAAAAGCAGTCAGAGCAACCAGACGATTTGGT...TTTTCTGCCTAGGGAGCCTGTGGAAACTTGTCCTGGACCTTTACTGCTCCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTAGCAGCAACCCAATTTaGCATCAATTATCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLPQGRDLSHKCGGWTSSNPI*HQLSHQ Trigger: TTGGTGAGATAATTGATGGCAAATTGGGTTGCTGCT...AGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | GATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGTTAGGCCCTGGCCTTTaGGTGGCATCCACAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DAFHRMTLINTVVPRDTVLGPGL*VASTEM Trigger: CATCTCTGTGGATGCCACCCAAAGGCCAGGGCCTAA...CACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | CACCCACTGATACTGGCTTTCCCATCTGCCACAGGGCAGAGATCTGAGCCACAAATATTCCAAGTTCAGTaGAGTTCAATGTCCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: HPLILAFPSATGQRSEPQIFQVQ*SSMSTH Trigger: GTGTGTGGACATTGAACTCCACTGAACTTGGAATAT...TTGTGGCTCAGATCTCTGCCCTGTGGCAGATGGGAAAGCCAGTATCAGTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR TCA 90 bp | AGGAAGCAGAAAGCCCATGATCGGTGGGGAAACAGGCTGGGAAGTCAAGTCTCACATCATGATTTCCTTTaGTATCCAGCCACTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKQKAHDRWGNRLGSQVSHHDFL*YPATWF Trigger: AAACCAAGTGGCTGGATATCAAAGGAAATCATGATG...TGAGACTTGACTTCCCAGCCTGTTTCCCCACCGATCATGGGCTTTCTGCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACGGATCAAATGTGAGATaGGCATCCTCTTGGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLDAFHRMTLINTVVPRDGSNVR*ASSWAE Trigger: TTCTGCCCAAGAGGATGCTCATCTCACATTTGATCC...GTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTGAAATGTGGTCATATTTaGAAATCCCAGAGGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PQGRDLSHKCGGWTSSRLKCGHI*KSQRFF Trigger: AAAGAACCTCTGGGATTTGCAAATATGACCACATTT...CAGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGGAGCAGTAAAGGTCCAGGACAAGTTTCCACAGGCTCCCTAGGCAGAAAAGATGCTCTCCAGACTTaGGATGTTATATGCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRSSKGPGQVSTGSLGRKDALQT*DVICIM Trigger: CATGATGCATATAACATCCCAAGTCTGGAGAGCATC...TTTTCTGCCTAGGGAGCCTGTGGAAACTTGTCCTGGACCTTTACTGCTCCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCTACTGTCCGGATCCCTaGGGATGGAGACATGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVRAGCFSQDDPNKHSSTYCPDP*GWRHDS Trigger: ACTATCATGTCTCCATCCCCAGGGATCCGGACAGTA...GGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCAAGTCTCAGGAGCAGTAAAGGTCCAGGACAAGTTTCCACAGGCTCCCTAATCAGTGTGGTGAGCTaGATCAGCACAATCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: KSSLRSSKGPGQVSTGSLISVVS*ISTINT Trigger: TGTGTTGATTGTGCTGATCCAGCTCACCACACTGAT...TAGGGAGCCTGTGGAAACTTGTCCTGGACCTTTACTGCTCCTGAGACTTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACAGGACAAGAGCCGGTTaGATGATGTCAATAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLDAFHRMTLINTVVPRDRTRAG*MMSIVS Trigger: GGAAACTATTGACATCATTCAACCGGCTCTTGTCCT...GTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | CGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGAATCGTCTGGTTGCTCTaGCTGCTTTTCTTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAGCFSQDDPNKHSSTKGIVWLL*LLFLEN Trigger: GTTTTCCAAGAAAAGCAGTCAGAGCAACCAGACGAT...TCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCAAGTCTCAGGAGCAGTAAAGGTCCAGGACAAGTTTCCACAGGCTCCCTATGTAATAATTGGCGATaGTCTCCAGACTTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSLRSSKGPGQVSTGSLCNNWR*SPDLGC Trigger: ACATCCCAAGTCTGGAGAGCATCGCCAATTATTACA...TAGGGAGCCTGTGGAAACTTGTCCTGGACCTTTACTGCTCCTGAGACTTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTCACCCACTGATACTGGCTTTCCCATCTGCCACAGGGCAGAGATCTGAGAAATGTGGTCATATTTaGAAATCCCAGAGGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EAHPLILAFPSATGQRSEKCGHI*KSQRFF Trigger: AAAGAACCTCTGGGATTTGCAAATATGACCACATTT...CTCAGATCTCTGCCCTGTGGCAGATGGGAAAGCCAGTATCAGTGGGTGAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | AAGTCAAGTCTCAGGAGCAGTAAAGGTCCAGGACAAGTTTCCACAGGCTCCCTAGTTGATGTTGTAAAGTaGCCAAACCAAATCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSSLRSSKGPGQVSTGSLVDVVK*PNQIVW Trigger: CCAGACGATTTGGTTTGGCCACTTTACAACATCAAC...TAGGGAGCCTGTGGAAACTTGTCCTGGACCTTTACTGCTCCTGAGACTTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCCTTATGTGTGTGGAATaGAAGAGCCTTTCTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVRAGCFSQDDPNKHSSTLMCVE*KSLSSG Trigger: GCCGCTAGAAAGGCTCTTCCATTCCACACACATAAG...GGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR TCA 90 bp | GATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGTGGCATCCACAGAGATaGAGGAATAGTTGCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DAFHRMTLINTVVPRDTVWHPQR*RNSCQR Trigger: CCTTTGGCAACTATTCCTTCATCTCTGTGGATGCCA...CACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGAGCAGTAAAGGTCCAGGACAAGTTTCCACAGGCTCCCTAGGCAGAAAAAGTAAGGAGGATAAATaGTGCCAAAGGATCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LRSSKGPGQVSTGSLGRKSKEDK*CQRIKC Trigger: ACATTTGATCCTTTGGCATCATTTATCCTCCTTACT...TTTTCTGCCTAGGGAGCCTGTGGAAACTTGTCCTGGACCTTTACTGCTCCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGTAGTGGTGGAGATGAGACCTaGAGCTGTGACCAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKNQLLDFSAVHTARISSGGDET*SCDQSS Trigger: GCTGCTTTGGTCACAGCTTCAGGTCTCATCTCCACC...ACTACTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR GCA 90 bp | CGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGATGTAATAATTGGCGATaGTCTCCAGACTTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGCFSQDDPNKHSSTKGCNNWR*SPDLGC Trigger: ACATCCCAAGTCTGGAGAGCATCGCCAATTATTACA...TCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | TACGTAAGCCATCAAGGGGATGTTAAAGAACACCAGCTGTATAATTCCATTTATCTGTCAGGTCTCCAGTaGCCAGGACAAGAGCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YVSHQGDVKEHQLYNSIYLSGLQ*PGQEPV Trigger: AACCGGCTCTTGTCCTGGCCACTGGAGACCTGACAG...ATAAATGGAATTATACAGCTGGTGTTCTTTAACATCCCCTTGATGGCTTACGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAACCCAATTTGCCATCAATTATCTCACCAACAAACCATGGTCCCAGCACACTTCCTGTAATAATTaGCGATGCTCTCCAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AATQFAINYLTNKPWSQHTSCNN*RCSPDL Trigger: CAAGTCTGGAGAGCATCGCCAATTATTACAGGAAGT...GTGCTGGGACCATGGTTTGTTGGTGAGATAATTGATGGCAAATTGGGTTGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACATGGCATCCACAGAGATaGAGGAATAGTTGCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTWHPQR*RNSCQR Trigger: CCTTTGGCAACTATTCCTTCATCTCTGTGGATGCCA...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | GATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGATCGTCTGGTTGCTCTaGCTGCTTTTCTTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DAFHRMTLINTVVPRDTVIVWLL*LLFLEN Trigger: GTTTTCCAAGAAAAGCAGTCAGAGCAACCAGACGAT...CACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGATAGGACCAGACAAGTaGGAAGCCTGGCCTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: PEEESIVRLFCSPHSKNQIGPDK*EAWPIS Trigger: TGATATAGGCCAGGCTTCTCACTTGTCTGGTCCTAT...CTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR TCA 90 bp | AAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAGCAGAAAATATGTGGTaGGCAGTCCTACTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFGLDAFHRMTLINTVVPAENMW*AVLLLP Trigger: TGGAAGAAGTAGGACTGCTCACCACATATTTTCTGC...TGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCTTTAAGCTCTGGGTATGCTAGATATCTGAATGTAATCAGTGTGGTGAGCGGATCAAATGTGAGATaGGCATCCTCTTGGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSLSSGYARYLNVISVVSGSNVR*ASSWAE Trigger: TTCTGCCCAAGAGGATGCTCATCTCACATTTGATCC...GCTCACCACACTGATTACATTCAGATATCTAGCATACCCAGAGCTTAAAGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAACCAAATCGTCTGGTTaGTCTGACTGCTTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFGLDAFHRMTLINTVVPTKSSG*SDCFSW Trigger: CCAAGAAAAGCAGTCAGAGCAACCAGACGATTTGGT...TGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTCTACTTCATGTTGTCTaGATCCCAAGTGTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVRAGCFSQDDPNKHSSLLHVV*IPSVPL Trigger: CAAAGGAACACTTGGGATCCAGACAACATGAAGTAG...ACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGATACTGTCCGGATCCCTaGGGATGGAGACATGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHTARISSKHFQHSDVQGYCPDP*GWRHDS Trigger: ACTATCATGTCTCCATCCCCAGGGATCCGGACAGTA...TCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGTGTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACACTTATGTGTGTGGAATaGAAGAGCCTTTCTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTLMCVE*KSLSSG Trigger: GCCGCTAGAAAGGCTCTTCCATTCCACACACATAAG...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR TCA 90 bp | GAACTCCAAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTCATCATGATTTCCTTTaGTATCCAGCCACTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELQVRAGCFSQDDPNKHSHHDFL*YPATWF Trigger: AAACCAAGTGGCTGGATATCAAAGGAAATCATGATG...ACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTTGGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | GTCCACACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGATGGCATCCACAGAGATaGAGGAATAGTTGCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHTARISSKHFQHSDVQGWHPQR*RNSCQR Trigger: CCTTTGGCAACTATTCCTTCATCTCTGTGGATGCCA...TCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGTGTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACAATCGTCTGGTTGCTCTaGCTGCTTTTCTTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTIVWLL*LLFLEN Trigger: GTTTTCCAAGAAAAGCAGTCAGAGCAACCAGACGAT...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTCTTAACCACTGATCTCTCCAACCCATTGTTTATGGCTACCATTCATTCAAAGCTAAAGAGGTCGTaGTCAAAGGCAAAGATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MLLTTDLSNPLFMATIHSKLKRS*SKAKIR Trigger: CCGGATCTTTGCCTTTGATCACGACCTCTTTAGCTT...TGAATGAATGGTAGCCATAAACAATGGGTTGGAGAGATCAGTGGTTAAGAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067582.14 |
||
| CDS-3UTR TCA 90 bp | GTCCACACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAAAGCTAAAGAGGTCGTaGTCAAAGGCAAAGATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VHTARISSKHFQHSDVQGKLKRS*SKAKIR Trigger: CCGGATCTTTGCCTTTGATCACGACCTCTTTAGCTT...TCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGTGTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR TCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACAGCAGAAAATATGTGGTaGGCAGTCCTACTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTAENMW*AVLLLP Trigger: TGGAAGAAGTAGGACTGCTCACCACATATTTTCTGC...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | GATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGTGTAATAATTGGCGATaGTCTCCAGACTTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DAFHRMTLINTVVPRDTVCNNWR*SPDLGC Trigger: ACATCCCAAGTCTGGAGAGCATCGCCAATTATTACA...CACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACAAGTTGCCAAAGGGAGTaGTGTGGATGTGATGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTSCQRE*CGCDEK Trigger: CTTTTCATCACATCCACAGCACTCCCTTTGGCAACT...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCTTTAAGCTCTGGGTATGCTAGATATCTGAATGTAATCAGTGTGGTGAGCAGTTGCCAAAGGGAGTaGTGTGGATGTGATGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLSSGYARYLNVISVVSSCQRE*CGCDEK Trigger: CTTTTCATCACATCCACAGCACTCCCTTTGGCAACT...GCTCACCACACTGATTACATTCAGATATCTAGCATACCCAGAGCTTAAAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACAACCAAATCGTCTGGTTaGTCTGACTGCTTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTTKSSG*SDCFSW Trigger: CCAAGAAAAGCAGTCAGAGCAACCAGACGATTTGGT...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | GATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGGTCAAAGGTTACATCTaGAAAGCTAAAGAGGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DAFHRMTLINTVVPRDTVVKGYI*KAKEVV Trigger: CACGACCTCTTTAGCTTTGCAGATGTAACCTTTGAC...CACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACAAGTGTTCCTTTGTTTTaGCATCTGTCAGGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTSVPLF*HLSGLQ Trigger: CTGGAGACCTGACAGATGCCAAAACAAAGGAACACT...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAGTGACTTACTGTCCGGATCCCTaGGGATGGAGACATGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TARISSKHFQHSDVQGVTYCPDP*GWRHDS Trigger: ACTATCATGTCTCCATCCCCAGGGATCCGGACAGTA...AGTCACTCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGAATACTCTTATGTGTGTaGAATGGAAGAGCCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RAGCFSQDDPNKHSSTKGILLCV*NGRAFL Trigger: TAGAAAGGCTCTTCCATTCCACACACATAAGAGTAT...TCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| 3UTR CAA 72 bp | TTGATTAGGGCTCTTTGCCTCCTGAGGAAGAATCAATaGTTAGACTTTTCTGCAGTCCACACAGCAAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LIRALCLLRKNQ*LDFSAVHTARI Trigger: GATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAGGAGGCAAAGAGCCCTAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCACATCATGATTTCCTTTaGTATCCAGCCACTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KFGLDAFHRMTLINTVVPHHDFL*YPATWF Trigger: AAACCAAGTGGCTGGATATCAAAGGAAATCATGATG...TGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR TCA 90 bp | GAACTCCAAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTTTTTTAACTGCACCATaGATATTCCAAGTTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELQVRAGCFSQDDPNKHSFLTAP*IFQVQW Trigger: CCACTGAACTTGGAATATTCATGGTGCAGTTAAAAA...ACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTTGGAGTTC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR GCA 90 bp | ATGCTCTTAACCACTGATCTCTCCAACCCATTGTTTATGGCTACCATTCATTCACTGGATCTTGAAATCTaGTCAGGTGAATGTCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: MLLTTDLSNPLFMATIHSLDLEI*SGECRI Trigger: TATCCGACATTCACCTGAGCAGATTTCAAGATCCAG...TGAATGAATGGTAGCCATAAACAATGGGTTGGAGAGATCAGTGGTTAAGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACACAGTGACACATCTGGTTGCTCTGACTaGTTTTCTTGGAAAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSQDDPNKHSSTKGHSDTSGCSD*FSWKTL Trigger: TAGAGTTTTCCAAGAAAAGCAGTCAGAGCAACCAGA...TGTGTCACTGTGTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCTTAACCACTGATCTCTCCAACCCATTGTTTATGGCTACCATTCATTCAGTTGATGTTGTAAAGTaGCCAAACCAAATCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLLTTDLSNPLFMATIHSVDVVK*PNQIVW Trigger: CCAGACGATTTGGTTTGGCCACTTTACAACATCAAC...TGAATGAATGGTAGCCATAAACAATGGGTTGGAGAGATCAGTGGTTAAGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAGTTGATGTTGTAAAGTaGCCAAACCAAATCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHTARISSKHFQHSDVQGVDVVK*PNQIVW Trigger: CCAGACGATTTGGTTTGGCCACTTTACAACATCAAC...TCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGTGTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAATACTCTTATGTGTGTaGAATGGAAGAGCCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KFGLDAFHRMTLINTVVPILLCV*NGRAFL Trigger: TAGAAAGGCTCTTCCATTCCACACACATAAGAGTAT...TGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGTAGTCTCACCAACAAACCATaGTCCCAGCACTGTATACAA | + |
|
Preference number: 4 (lower is better) Translates to: RKNQLLDFSAVHTARISSLTNKP*SQHCIQ Trigger: TTGTATACAGTGCTGGGACCATGGTTTGTTGGTGAG...ACTACTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGATATTCCAAGTTCAGTaGAGTTCAATGTCCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PEEESIVRLFCSPHSKNQIFQVQ*SSMSTH Trigger: GTGTGTGGACATTGAACTCCACTGAACTTGGAATAT...CTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGTTTTTAACTGCACCATaGATATTCCAAGTTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEEESIVRLFCSPHSKNQFLTAP*IFQVQW Trigger: CCACTGAACTTGGAATATTCATGGTGCAGTTAAAAA...CTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCTCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR GCA 90 bp | GTCCACACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAAGCAGCAACCCAATTTaGCATCAATTATCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VHTARISSKHFQHSDVQGSSNPI*HQLSHQ Trigger: TTGGTGAGATAATTGATGGCAAATTGGGTTGCTGCT...TCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGTGTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGTAGTGATGCTCTCCAGACTTaGGATGTTATATGCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKNQLLDFSAVHTARISSDALQT*DVICIM Trigger: CATGATGCATATAACATCCCAAGTCTGGAGAGCATC...ACTACTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGAATCAATTGTTAGACTTTTCTGCAGTCCACACAGCAAGAATCAGTAGTTCTGGTTGCTCTGACTaGTTTTCTTGGAAAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RKNQLLDFSAVHTARISSSGCSD*FSWKTL Trigger: TAGAGTTTTCCAAGAAAAGCAGTCAGAGCAACCAGA...ACTACTGATTCTTGCTGTGTGGACTGCAGAAAAGTCTAACAATTGATTCTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS-3UTR CCA 90 bp | TACGTAAGCCATCAAGGGGATGTTAAAGAACACCAGCTGTATAATTCCATTTATGATGCTCTCCAGACTTaGGATGTTATATGCATCATG | + |
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Preference number: 4 (lower is better) Translates to: YVSHQGDVKEHQLYNSIYDALQT*DVICIM Trigger: CATGATGCATATAACATCCCAAGTCTGGAGAGCATC...ATAAATGGAATTATACAGCTGGTGTTCTTTAACATCCCCTTGATGGCTTACGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| CDS TCA 90 bp | TTGTCTTTCCAGTCTCCCACCTCAAGTTCCAGCGTGCCTGTGAAGTaGCGGGTGTGCAGAACAGGCATCAGCCCACCAAGCGTATGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LSFQSPTSSSSVPVK*RVCRTGISPPSVWR Trigger: CCTCCATACGCTTGGTGGGCTGATGCCTGTTCTGCACACCCGTCACTTCACAGGCACGCTGGAACTTGAGGTGGGAGACTGGAAAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | GCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTCAGGACAAGAGCCGGTaGAATGATGTCAATAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: ATGQRSEPQMWRLDFFQAQDKSR*NDVNSF Trigger: GAAACTATTGACATCATTCAACCGGCTCTTGTCCTG...AGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | GCCACAGGGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTAAGTGTTCCTTTGTTTaGGCATCTGTCAGGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: ATGQRSEPQMWRLDFFQAKCSFV*ASVRSP Trigger: TGGAGACCTGACAGATGCCAAAACAAAGGAACACTT...AGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCCCTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | GAAGCTCACCCACTGATACTGGCTTTCCCATCTGCCACAGGGCAGAGATCTGAGAGAACCACAGGCCACTaGTCAAAGGTTACATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: EAHPLILAFPSATGQRSERTTGH*SKVTSA Trigger: TGCAGATGTAACCTTTGACAAGTGGCCTGTGGTTCT...CTCAGATCTCTGCCCTGTGGCAGATGGGAAAGCCAGTATCAGTGGGTGAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS-3UTR CAA 90 bp | GGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTGCTAGCTCAGGACAAGAGCCGGTaGAATGATGTCAATAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: GRDLSHKCGGWTSSRLLAQDKSR*NDVNSF Trigger: GAAACTATTGACATCATTCAACCGGCTCTTGTCCTG...AGCTAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | GGCAGAGATCTGAGCCACAAATGTGGAGGCTGGACTTCTTCCAGGCTGCTAGCTATCCCAAGTGTTCCTTaGTTTTGGCATCTGTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: GRDLSHKCGGWTSSRLLAIPSVP*FWHLSG Trigger: ACCTGACAGATGCCAAAACAAAGGAACACTTGGGAT...AGCTAGCAGCCTGGAAGAAGTCCAGCCTCCACATTTGTGGCTCAGATCTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGCAGAAAGCCCATGATCGGTGGGGAAACAGGCTGGGAAGTCAAGTCTCAAGAACCACAGGCCACTaGTCAAAGGTTACATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RKQKAHDRWGNRLGSQVSRTTGH*SKVTSA Trigger: TGCAGATGTAACCTTTGACAAGTGGCCTGTGGTTCT...TGAGACTTGACTTCCCAGCCTGTTTCCCCACCGATCATGGGCTTTCTGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS-3UTR CAA 90 bp | AGCAGAAAGCCCATGATCGGTGGGGAAACAGGCTGGGAAGTCAAGTCTCAGGAGAAGCAGCAACCCAATTaGCCATCAATTATCTCACCA | + |
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Preference number: 5 (lower is better) Translates to: SRKPMIGGETGWEVKSQEKQQPN*PSIISP Trigger: TGGTGAGATAATTGATGGCAAATTGGGTTGCTGCTT...CTCCTGAGACTTGACTTCCCAGCCTGTTTCCCCACCGATCATGGGCTTTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS TCA 90 bp | GGAACCCATTACTGTCCGGATCCCTGGGGATGGAGACATGATAGTTaGTGTTGTAAAGTGGCCAAACCAAATCGTCTGGTTGCTCTGACT | + |
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Preference number: 5 (lower is better) Translates to: GTHYCPDPWGWRHDS*CCKVAKPNRLVALT Trigger: AGTCAGAGCAACCAGACGATTTGGTTTGGCCACTTTACAACATCAACTATCATGTCTCCATCCCCAGGGATCCGGACAGTAATGGGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | GCAGCAACCCAATTTGCCATCAATTATCTCACCAACAAACCATGGTCCCAGCACAGCAGAATCCTTCTGTaGTCTTTCCAGTCTCCCACC | + |
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Preference number: 5 (lower is better) Translates to: AATQFAINYLTNKPWSQHSRILL*SFQSPT Trigger: GGTGGGAGACTGGAAAGACAACAGAAGGATTCTGCT...GTGCTGGGACCATGGTTTGTTGGTGAGATAATTGATGGCAAATTGGGTTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139428.8 |
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| CDS GCA 90 bp | GGGATTGGTGATGAGAACCACAGGCCACTTGTCAAAGGTTACATCTaGAAAGCTAAAGAGGTCGTGATCAAAGGCAAAGATCCGGTACCT | + |
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Preference number: 5 (lower is better) Translates to: GIGDENHRPLVKGYI*KAKEVVIKGKDPVP Trigger: AGGTACCGGATCTTTGCCTTTGATCACGACCTCTTTAGCTTTGCAGATGTAACCTTTGACAAGTGGCCTGTGGTTCTCATCACCAATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS-3UTR CAA 90 bp | GGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACGAGATGAGCATCCTCTaGGGCAGAAAATATGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GLDAFHRMTLINTVVPRDEMSIL*GRKYVV Trigger: CACCACATATTTTCTGCCCAAGAGGATGCTCATCTC...GTCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS CCA 90 bp | GAAAAGCGCCGTCCTTCCGCACAGCAGAGTACTTCCTGTAATAATTaGCGATGCTCTCCAGACTTGGGATGTTATATGCATCATGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: EKRRPSAQQSTSCNN*RCSPDLGCYMHHDF Trigger: GAAATCATGATGCATATAACATCCCAAGTCTGGAGAGCATCGCCAATTATTACAGGAAGTACTCTGCTGTGCGGAAGGACGGCGCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | CGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGAAAGTGTTCCTTTGTTTaGGCATCTGTCAGGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RAGCFSQDDPNKHSSTKGKCSFV*ASVRSP Trigger: TGGAGACCTGACAGATGCCAAAACAAAGGAACACTT...TCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | CGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAAGGGACCATTCTACTTCATGTaGTCTGGATCCCAAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAGCFSQDDPNKHSSTKGPFYFM*SGSQVF Trigger: GAACACTTGGGATCCAGACAACATGAAGTAGAATGG...TCCCTTGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS TCA 90 bp | ACAGGCCACTTGTCAAAGGTTACATCTGCAAAGCTAAAGAGGTCGTaGTCAAAGGCAAAGATCCGGTACCTTCTGTTGTCTTTCCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: TGHLSKVTSAKLKRS*SKAKIRYLLLSFQS Trigger: AGACTGGAAAGACAACAGAAGGTACCGGATCTTTGCCTTTGATCACGACCTCTTTAGCTTTGCAGATGTAACCTTTGACAAGTGGCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS-3UTR CAA 90 bp | AAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTACCAGAGATGAGCATCCTCTaGGGCAGAAAATATGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: KFGLDAFHRMTLINTVVPEMSIL*GRKYVV Trigger: CACCACATATTTTCTGCCCAAGAGGATGCTCATCTC...TGGTACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | CTCCAAGTTCGGGCTGGATGCTTTTCACAGGATGACCCTAATAAACACAGTAGTAAGCAGCAACCCAATTaGCCATCAATTATCTCACCA | + |
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Preference number: 5 (lower is better) Translates to: LQVRAGCFSQDDPNKHSSKQQPN*PSIISP Trigger: TGGTGAGATAATTGATGGCAAATTGGGTTGCTGCTT...ACTACTGTGTTTATTAGGGTCATCCTGTGAAAAGCATCCAGCCCGAACTTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS TCA 90 bp | ATAGTTGATGTTGTAAAGTGGCCAAACCAAATCGTCTGGTTGCTCTaGCTGCTTTTCTTGGAAAACTCTACGAGTTCCTCCATCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: IVDVVKWPNQIVWLL*LLFLENSTSSSICF Trigger: GAAACAGATGGAGGAACTCGTAGAGTTTTCCAAGAAAAGCAGTCAGAGCAACCAGACGATTTGGTTTGGCCACTTTACAACATCAACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS CCA 90 bp | TTTTCAGAATTCTCTGGTAAGTTTGCCATTCTACTTCATGTTGTCTaGATCCCAAGTGTTCCTTTGTTTTGGCATCTGTCAGGTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: FSEFSGKFAILLHVV*IPSVPLFWHLSGLQ Trigger: CTGGAGACCTGACAGATGCCAAAACAAAGGAACACTTGGGATCCAGACAACATGAAGTAGAATGGCAAACTTACCAGAGAATTCTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | ATGCTCTTAACCACTGATCTCTCCAACCCATTGTTTATGGCTACCATTCATTCACCATTCTACTTCATGTaGTCTGGATCCCAAGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: MLLTTDLSNPLFMATIHSPFYFM*SGSQVF Trigger: GAACACTTGGGATCCAGACAACATGAAGTAGAATGG...TGAATGAATGGTAGCCATAAACAATGGGTTGGAGAGATCAGTGGTTAAGAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | ACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAGTGACTGAGATGAGCATCCTCTaGGGCAGAAAATATGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TARISSKHFQHSDVQGVTEMSIL*GRKYVV Trigger: CACCACATATTTTCTGCCCAAGAGGATGCTCATCTC...AGTCACTCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | ATGCTCTTAACCACTGATCTCTCCAACCCATTGTTTATGGCTACCATTCATTCAAATTCTCTGGTAAGTTaGCCATTCTACTTCATGTTG | + |
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Preference number: 5 (lower is better) Translates to: MLLTTDLSNPLFMATIHSNSLVS*PFYFML Trigger: CAACATGAAGTAGAATGGCAAACTTACCAGAGAATT...TGAATGAATGGTAGCCATAAACAATGGGTTGGAGAGATCAGTGGTTAAGAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS-3UTR CAA 90 bp | ACAGCAAGAATCAGTAGTAAACATTTCCAACATTCAGATGTCCAAGGAGTGACTAATTCTCTGGTAAGTTaGCCATTCTACTTCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TARISSKHFQHSDVQGVTNSLVS*PFYFML Trigger: CAACATGAAGTAGAATGGCAAACTTACCAGAGAATT...AGTCACTCCTTGGACATCTGAATGTTGGAAATGTTTACTACTGATTCTTGCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS CCA 72 bp | TTGTTGGCTTCCGAGCCCGGGGCGGGGTGCGGCCTCTaGGAGCCTCTGGGCTTCGGCAGCGGCGTAGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLASEPGAGCGL*EPLGFGSGVVG Trigger: GCCGACTACGCCGCTGCCGAAGCCCAGAGGCTCCCAGAGGCCGCACCCCGCCCCGGGCTCGGAAGCCAACAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS GCA 72 bp | CAGAAGATGTTGTTGGCTTCCGAGCCCGGGGCGGGGTaGGGCCTCTGGGAGCCTCTGGGCTTCGGCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QKMLLASEPGAG*GLWEPLGFGSG Trigger: GCCGCTGCCGAAGCCCAGAGGCTCCCAGAGGCCGCACCCCGCCCCGGGCTCGGAAGCCAACAACATCTTCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS TCA 72 bp | CAGTCTCCCACCTCAAGTTCCAGCGTGCCTGTGAAGTaGCGGGTGTGCAGAACAGGCATCAGCCCACCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSPTSSSSVPVK*RVCRTGISPPS Trigger: GCTTGGTGGGCTGATGCCTGTTCTGCACACCCGTCACTTCACAGGCACGCTGGAACTTGAGGTGGGAGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS TCA 72 bp | CTTTCCAGTCTCCCACCTCAAGTTCCAGCGTGCCTGTaGAGTGACGGGTGTGCAGAACAGGCATCAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSSLPPQVPACL*SDGCAEQASAH Trigger: GTGGGCTGATGCCTGTTCTGCACACCCGTCACTTCACAGGCACGCTGGAACTTGAGGTGGGAGACTGGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS GCA 72 bp | TCTCTAAGGCCAGCGCTCTGCCTGGATCTTGAAATCTaGTCAGGTGAATGTCGGATATCTGCAGCCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLRPALCLDLEI*SGECRISAAPR Trigger: TCTGGGGGCTGCAGATATCCGACATTCACCTGAGCAGATTTCAAGATCCAGGCAGAGCGCTGGCCTTAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000139428.8 |
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| CDS CAA 72 bp | GCCAAAGAAATTATAGGGTCTCTTAGGCCCTGGCCTTaGGGTGGCATCCACAGAGATGAAGGAATAGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AKEIIGSLRPWP*GGIHRDEGIVA Trigger: GGCAACTATTCCTTCATCTCTGTGGATGCCACCCAAAGGCCAGGGCCTAAGAGACCCTATAATTTCTTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS CCA 72 bp | CGTCCTTCCGCACAGCAGAGTACTTCCTGTAATAATTaGCGATGCTCTCCAGACTTGGGATGTTATATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RPSAQQSTSCNN*RCSPDLGCYMH Trigger: ATGCATATAACATCCCAAGTCTGGAGAGCATCGCCAATTATTACAGGAAGTACTCTGCTGTGCGGAAGGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS CCA 72 bp | TATGCTAGATATCTGAATGTAATCAGTGTGGTGAGCTaGATCAGCACAATCAACACAAACAGGACCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: YARYLNVISVVS*ISTINTNRTRA Trigger: GGCCCGGGTCCTGTTTGTGTTGATTGTGCTGATCCAGCTCACCACACTGATTACATTCAGATATCTAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS TCA 72 bp | GTTGTAAAGTGGCCAAACCAAATCGTCTGGTTGCTCTaGCTGCTTTTCTTGGAAAACTCTACGAGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VVKWPNQIVWLL*LLFLENSTSSS Trigger: GGAGGAACTCGTAGAGTTTTCCAAGAAAAGCAGTCAGAGCAACCAGACGATTTGGTTTGGCCACTTTACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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| CDS CCA 72 bp | GATAAGGAAAAGGCCAATACTCTTATGTGTGTGGAATaGAAGAGCCTTTCTAGCGGCTCATGCTTAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: DKEKANTLMCVE*KSLSSGSCLAQ Trigger: CTGTGCTAAGCATGAGCCGCTAGAAAGGCTCTTCCATTCCACACACATAAGAGTATTGGCCTTTTCCTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS GCA 72 bp | GATGAGAACCACAGGCCACTTGTCAAAGGTTACATCTaGAAAGCTAAAGAGGTCGTGATCAAAGGCAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: DENHRPLVKGYI*KAKEVVIKGKD Trigger: ATCTTTGCCTTTGATCACGACCTCTTTAGCTTTGCAGATGTAACCTTTGACAAGTGGCCTGTGGTTCTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS TCA 72 bp | TTGTCAAAGGTTACATCTGCAAAGCTAAAGAGGTCGTaGTCAAAGGCAAAGATCCGGTACCTTCTGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSKVTSAKLKRS*SKAKIRYLLLS Trigger: AGACAACAGAAGGTACCGGATCTTTGCCTTTGATCACGACCTCTTTAGCTTTGCAGATGTAACCTTTGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 |
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| CDS CCA 72 bp | CAAACCAAATCGTCTGGTTGCTCTGACTGCTTTTCTTaGAAAACTCTACGAGTTCCTCCATCTGTTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QTKSSGCSDCFS*KTLRVPPSVSH Trigger: ATGAGAAACAGATGGAGGAACTCGTAGAGTTTTCCAAGAAAAGCAGTCAGAGCAACCAGACGATTTGGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067582.14 ENSMUST00000110686.3 ENSMUST00000139428.8 |
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