Pregenerated sensors for TMEM61 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000085933Ensembl transcript IDs: ENSMUST00000148907.2, ENSMUST00000177702.2, ENSMUST00000238833.2, ENSMUST00000239070.2, ENSMUST00000239147.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCTGCAACTCTCCTGCAGCCTGAGCTCAGACAGGGCTGGAGCCTaGAGCACTCAATCCAGAAACAGGCCCCTGAGCGAGGAGGATGCT | + |
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Preference number: 1 (lower is better) Translates to: DLQLSCSLSSDRAGA*STQSRNRPLSEEDA Trigger: AGCATCCTCCTCGCTCAGGGGCCTGTTTCTGGATTGAGTGCTGCAGGCTCCAGCCCTGTCTGAGCTCAGGCTGCAGGAGAGTTGCAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CCA 90 bp | TGCTGGAGACCTGCAACTCTCCTGCAGCCTGAGCTCAGACAGGGCTaGAGCCTGCAGCACTCAATCCAGAAACAGGCCCCTGAGCGAGGA | + |
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Preference number: 1 (lower is better) Translates to: CWRPATLLQPELRQG*SLQHSIQKQAPERG Trigger: TCCTCGCTCAGGGGCCTGTTTCTGGATTGAGTGCTGCAGGCTCCAGCCCTGTCTGAGCTCAGGCTGCAGGAGAGTTGCAGGTCTCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR GCA 90 bp | GTTAGGGGCCAGTTTCACAGCCTTGCTGGAGACCTGCAACTCTCCTaGAGCCTGAGCTCAGACAGGGCTGGAGCCTGCAGCACTCAATCC | + |
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Preference number: 1 (lower is better) Translates to: VRGQFHSLAGDLQLS*SLSSDRAGACSTQS Trigger: GGATTGAGTGCTGCAGGCTCCAGCCCTGTCTGAGCTCAGGCTGCAGGAGAGTTGCAGGTCTCCAGCAAGGCTGTGAAACTGGCCCCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR TCA 90 bp | GCCAGTTTCACAGCCTTGCTGGAGACCTGCAACTCTCCTGCAGCCTaGGCTCAGACAGGGCTGGAGCCTGCAGCACTCAATCCAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: ASFTALLETCNSPAA*AQTGLEPAALNPET Trigger: TGTTTCTGGATTGAGTGCTGCAGGCTCCAGCCCTGTCTGAGCTCAGGCTGCAGGAGAGTTGCAGGTCTCCAGCAAGGCTGTGAAACTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR TCA 90 bp | TCAAGGACCCTTCCTATGGGGTTCTTGGCCCCTGTGCTTCTCTGGTaGGCTTGGCTGTTGCCTCCTCCTGCAAGGCTTCCCAGATTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SRTLPMGFLAPVLLW*AWLLPPPARLPRFL Trigger: GAGAAATCTGGGAAGCCTTGCAGGAGGAGGCAACAGCCAAGCTCACCAGAGAAGCACAGGGGCCAAGAACCCCATAGGAAGGGTCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR GCA 90 bp | ACTCTCCTGCATGCCAGGGAGACAGGGGAGTCTCCTTATGAAGCTTaGTGGAGCAGCTGCCAACATCAGCTCTCCCTCCTCCTCATACTT | + |
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Preference number: 1 (lower is better) Translates to: TLLHARETGESPYEA*WSSCQHQLSLLLIL Trigger: AAGTATGAGGAGGAGGGAGAGCTGATGTTGGCAGCTGCTCCAGCAAGCTTCATAAGGAGACTCCCCTGTCTCCCTGGCATGCAGGAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR GCA 90 bp | GATCTAGAGTTACCTAGGAGACGAAGCTCTGGGAGGGTGTGTGGGTaGATCATCCCACACGTTTGGTATAGCATCCGCTGTGCTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: DLELPRRRSSGRVCG*IIPHVWYSIRCAEV Trigger: GACCTCAGCACAGCGGATGCTATACCAAACGTGTGGGATGATGCACCCACACACCCTCCCAGAGCTTCGTCTCCTAGGTAACTCTAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CCA 90 bp | GCAATGGTGGTTCCCGGTGGCATAAAGGTACAAGCAGGCAGAGGGTaGAGAATGCATGCAGGCTCCAGATCCAAGGGGTGCTTTGTAGAA | + |
|
Preference number: 1 (lower is better) Translates to: AMVVPGGIKVQAGRG*RMHAGSRSKGCFVE Trigger: TTCTACAAAGCACCCCTTGGATCTGGAGCCTGCATGCATTCTCCACCCTCTGCCTGCTTGTACCTTTATGCCACCGGGAACCACCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CCA 90 bp | CAGCACACTAGAGGAGAGAGAGGGATGATGGTCGAGCTTCAGCATTaGCAAGATCTAGAGTTACCTAGGAGACGAAGCTCTGGGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: QHTRGERGMMVELQH*QDLELPRRRSSGRV Trigger: CACCCTCCCAGAGCTTCGTCTCCTAGGTAACTCTAGATCTTGCCAATGCTGAAGCTCGACCATCATCCCTCTCTCTCCTCTAGTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR TCA 90 bp | ACTTTACCCGTCTGTAAAACAGGCCTAATCCCTACATCCTCCCTGTaGGCAGCCCAGGCTCAGCCTGTTCAAGACCAAGACTGCAATGAG | + |
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Preference number: 1 (lower is better) Translates to: TLPVCKTGLIPTSSL*AAQAQPVQDQDCNE Trigger: CTCATTGCAGTCTTGGTCTTGAACAGGCTGAGCCTGGGCTGCTCACAGGGAGGATGTAGGGATTAGGCCTGTTTTACAGACGGGTAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR GCA 90 bp | TATGGGCGGTACCTAGTACACTCTCAACACAGATCTCTGTGGTTGTaGGGTGTGGCCATGCACAGAGATCAGGATAGCCTTGTAAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: YGRYLVHSQHRSLWL*GVAMHRDQDSLVRA Trigger: TGCCCTTACAAGGCTATCCTGATCTCTGTGCATGGCCACACCGCACAACCACAGAGATCTGTGTTGAGAGTGTACTAGGTACCGCCCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR TCA 90 bp | AAGTGCAGAGGTCACACAGTCTTGCAGACCACAGGCTCACCCATGTaGGCTGCATGTAACAGAAAAAGCCTCCTACAGACAGCAATGGTG | + |
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Preference number: 1 (lower is better) Translates to: KCRGHTVLQTTGSPM*AACNRKSLLQTAMV Trigger: CACCATTGCTGTCTGTAGGAGGCTTTTTCTGTTACATGCAGCTCACATGGGTGAGCCTGTGGTCTGCAAGACTGTGTGACCTCTGCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR TCA 90 bp | AAACCCAGTAGAGCAGGAGGAAGCCCCACCCACCTCACAGAGGGATaGGTAGAAAGCACATCAGCTGAATGTACAGTCCTCTTCTCTAAC | + |
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Preference number: 1 (lower is better) Translates to: KPSRAGGSPTHLTEG*VESTSAECTVLFSN Trigger: GTTAGAGAAGAGGACTGTACATTCAGCTGATGTGCTTTCTACTCATCCCTCTGTGAGGTGGGTGGGGCTTCCTCCTGCTCTACTGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CCA 90 bp | GCTCAAAAGCTGGTCATGGAGATGCGTGCCTGTAATCCCAGCTCTTaGGACAGGAGGATCACAAAGTTCACATTCAAAGGCTGGGGGATA | + |
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Preference number: 1 (lower is better) Translates to: AQKLVMEMRACNPSS*DRRITKFTFKGWGI Trigger: TATCCCCCAGCCTTTGAATGTGAACTTTGTGATCCTCCTGTCCCAAGAGCTGGGATTACAGGCACGCATCTCCATGACCAGCTTTTGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR GCA 90 bp | CAGGTTAGCTCCTTATGGAGCAGAAGTGCAGAGGTCACACAGTCTTaGAGACCACAGGCTCACCCATGTGAGCTGCATGTAACAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: QVSSLWSRSAEVTQS*RPQAHPCELHVTEK Trigger: TTTTTCTGTTACATGCAGCTCACATGGGTGAGCCTGTGGTCTGCAAGACTGTGTGACCTCTGCACTTCTGCTCCATAAGGAGCTAACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CCA 90 bp | GACATATCCTTGGGTATCCTTGGGCAAGTTAAAGGTCTCTGTGCCTaGCTTCCTCTTCCACAGGGAAGTTCTGGCTACGACACTAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: DISLGILGQVKGLCA*LPLPQGSSGYDTRD Trigger: ATCTCTAGTGTCGTAGCCAGAACTTCCCTGTGGAAGAGGAAGCCAGGCACAGAGACCTTTAACTTGCCCAAGGATACCCAAGGATATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CCA 90 bp | TCTATGGGGATCAGATTCCAAGAAGATGTGCTCAAAAGCTGGTCATaGAGATGCGTGCCTGTAATCCCAGCTCTTGGGACAGGAGGATCA | + |
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Preference number: 1 (lower is better) Translates to: SMGIRFQEDVLKSWS*RCVPVIPALGTGGS Trigger: TGATCCTCCTGTCCCAAGAGCTGGGATTACAGGCACGCATCTCCATGACCAGCTTTTGAGCACATCTTCTTGGAATCTGATCCCCATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| 3UTR CCA 90 bp | AGCACATCTATGGGGATCAGATTCCAAGAAGATGTGCTCAAAAGCTaGTCATGGAGATGCGTGCCTGTAATCCCAGCTCTTGGGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: STSMGIRFQEDVLKS*SWRCVPVIPALGTG Trigger: TCCTGTCCCAAGAGCTGGGATTACAGGCACGCATCTCCATGACCAGCTTTTGAGCACATCTTCTTGGAATCTGATCCCCATAGATGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| 3UTR CCA 90 bp | AGTGGAAATGACAGCCTCCTTAGGAGGCAGACCACAGCACATCTATaGGGATCAGATTCCAAGAAGATGTGCTCAAAAGCTGGTCATGGA | + |
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Preference number: 1 (lower is better) Translates to: SGNDSLLRRQTTAHL*GSDSKKMCSKAGHG Trigger: TCCATGACCAGCTTTTGAGCACATCTTCTTGGAATCTGATCCCCATAGATGTGCTGTGGTCTGCCTCCTAAGGAGGCTGTCATTTCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239070.2 |
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| 3UTR GCA 90 bp | ACTCGATCGTTCTATCTCAGTCTTCCAAGTGCTGGATTACAGGTGTaGTCTATCATGTCCCACTTGAAATCTGGCTATATGTATTATCTG | + |
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Preference number: 1 (lower is better) Translates to: TRSFYLSLPSAGLQV*SIMSHLKSGYMYYL Trigger: CAGATAATACATATAGCCAGATTTCAAGTGGGACATGATAGAGCACACCTGTAATCCAGCACTTGGAAGACTGAGATAGAACGATCGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CCA 90 bp | AAGTGCTGGATTACAGGTGTGCTCTATCATGTCCCACTTGAAATCTaGCTATATGTATTATCTGTTGAATGTTGTATCTGGTCTCAAATA | + |
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Preference number: 1 (lower is better) Translates to: KCWITGVLYHVPLEI*LYVLSVECCIWSQI Trigger: TATTTGAGACCAGATACAACATTCAACAGATAATACATATAGCCAGATTTCAAGTGGGACATGATAGAGCACACCTGTAATCCAGCACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGCATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGGAATTGCAGGAGACCCGAGCCTGCCTCCTGGTaGCCTGCCATGAGGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GAWHWRSSSGCTGNCRRPEPASW*PAMRVA Trigger: TGCCACCCTCATGGCAGGTCACCAGGAGGCAGGCTC...GGGTCTCCTGCAATTCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCGTGTGCAATGCACACCCACCACGGTCATCTCTCAGGAGCCCAGCAGCACACTCTGGGAGGGTGTGTaGGTGCATCATCCCACACGT | + |
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Preference number: 2 (lower is better) Translates to: SRVQCTPTTVISQEPSSTLWEGV*VHHPTR Trigger: ACGTGTGGGATGATGCACCCACACACCCTCCCAGAG...TGTGCTGCTGGGCTCCTGAGAGATGACCGTGGTGGGTGTGCATTGCACACGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAAGAGGCTGTTTAGCAGGACCAGCTCAAAACTCTCCTGCATGCCAGGGACCTGGTGACCTGCCATaGGGGTGGCAGCCAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QERGCLAGPAQNSPACQGPGDLP*GWQPAW Trigger: CCAAGCTGGCTGCCACCCTCATGGCAGGTCACCAGG...TCCCTGGCATGCAGGAGAGTTTTGAGCTGGTCCTGCTAAACAGCCTCTTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGATGCAGAGATCCCAGCATGTGGCATCCAGCAGGCTAGGGCTCAGGAGCTCGCAAGCCGTGTGCAATaGACACCCACCACGGTCATC | + |
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Preference number: 2 (lower is better) Translates to: SDAEIPACGIQQARAQELASRVQ*TPTTVI Trigger: GATGACCGTGGTGGGTGTGCATTGCACACGGCTTGC...GAGCTCCTGAGCCCTAGCCTGCTGGATGCCACATGCTGGGATCTCTGCATCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CAA 90 bp | CCCTGGGGCATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGGAATaGCAGGAGACCCTCAGCCAGTGGATAGTGCATGGTCTCCTCATA | + |
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Preference number: 2 (lower is better) Translates to: PWGMALEVFFRLHRE*QETLSQWIVHGLLI Trigger: TATGAGGAGACCATGCACTATCCACTGGCTGAGGGTCTCCTGCAATTCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| 3UTR-3UTR TCA 90 bp | GTACAAGCAGGCAGAGGGTGGAGAATGCATGCAGGCTCCAGATCCAAGGGGTGCTCTCTTACCTGGCCCTaGCCGTGCCCTCTTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: VQAGRGWRMHAGSRSKGCSLTWP*PCPLVS Trigger: AGAAACAAGAGGGCACGGTCAGGGCCAGGTAAGAGA...GCACCCCTTGGATCTGGAGCCTGCATGCATTCTCCACCCTCTGCCTGCTTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGGAATTGCAGGAGACCCAAAGGTCTCTGTGCCTaGCTTCCTCTTCCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GAWHWRSSSGCTGNCRRPKGLCA*LPLPQG Trigger: TCCCTGTGGAAGAGGAAGCCAGGCACAGAGACCTTT...GGGTCTCCTGCAATTCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CAA 90 bp | CCCTCCTCCTCATACTTCTCCACCTCTGCTCTCTTCCCGCACTTCTaGCTGCCACCACTCCCCACTTTGAAACTCCCCTGGGACATCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSSSYFSTSALFPHF*LPPLPTLKLPWDIF Trigger: GAAGATGTCCCAGGGGAGTTTCAAAGTGGGGAGTGGTGGCAGCAAGAAGTGCGGGAAGAGAGCAGAGGTGGAGAAGTATGAGGAGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAAGAGGCTGTTTAGCAGGACCAGCTCAAAACTCTCCTGCATGCCAGGGACTCTCTGAGCTGCTCTaGGACCAGGAGGGTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: QERGCLAGPAQNSPACQGLSELL*DQEGEP Trigger: AGGCTCACCCTCCTGGTCTCAGAGCAGCTCAGAGAG...TCCCTGGCATGCAGGAGAGTTTTGAGCTGGTCCTGCTAAACAGCCTCTTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCCTGCAGCACTCAATCCAGAAACAGGCCCCTGAGCGAGGAGGATGCTCTTTCCTATGGGGTTCTTaGCCCCTGTGCTTCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: WSLQHSIQKQAPERGGCSFLWGS*PLCFSG Trigger: ACCAGAGAAGCACAGGGGCCAAGAACCCCATAGGAA...AGAGCATCCTCCTCGCTCAGGGGCCTGTTTCTGGATTGAGTGCTGCAGGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CAA 90 bp | CTCACACAGCAACGGATGCATAAACAGCCCCCAGCAATAGACCTCTaGTTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: LTQQRMHKQPPAIDL*LNACCEPSPGGGLE Trigger: CTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAACAAGAGGTCTATTGCTGGGGGCTGTTTATGCATCCGTTGCTGTGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
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| 3UTR CAA 90 bp | ACACAGCAACGGATGCATAAACAGCCCCCAGCAATAGACCTCTTGTaGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: TQQRMHKQPPAIDLL*NACCEPSPGGGLEQ Trigger: TTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAACAAGAGGTCTATTGCTGGGGGCTGTTTATGCATCCGTTGCTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATGCAGAGATCCCAGCATGTGGCATCCAGCAGGCTAGGGCTCAGGAGCTCAGCTGGATTACAGGTGTaGTCTATCATGTCCCACTTG | + |
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Preference number: 2 (lower is better) Translates to: QMQRSQHVASSRLGLRSSAGLQV*SIMSHL Trigger: CAAGTGGGACATGATAGAGCACACCTGTAATCCAGC...TGAGCTCCTGAGCCCTAGCCTGCTGGATGCCACATGCTGGGATCTCTGCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGATGCAGAGATCCCAGCATGTGGCATCCAGCAGGCTAGGGCTCAGGAGCTCTCCCAGCAAAGTGGCTaGAATTTTAGGTCCCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SDAEIPACGIQQARAQELSQQSG*NFRSQF Trigger: GAACTGGGACCTAAAATTCCAGCCACTTTGCTGGGA...GAGCTCCTGAGCCCTAGCCTGCTGGATGCCACATGCTGGGATCTCTGCATCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCACAGGGAATTGCAGGAGACCCTCAGCCAGTGGATAGTGCATGGTCTCGTCTGGACTCTACTCTaGTTTGTCATTTGTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RLHRELQETLSQWIVHGLVWTLL*FVICLC Trigger: GCAGAGACAAATGACAAACCAGAGTAGAGTCCAGAC...GAGACCATGCACTATCCACTGGCTGAGGGTCTCCTGCAATTCCCTGTGCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGCATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGGAATTGCAGGAGACTACTCGGTGAGAATATaGATGACCAATCTTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: LGHGTGGLLQAAQGIAGDYSVRI*MTNLYR Trigger: CCTGTAAAGATTGGTCATGCATATTCTCACCGAGTA...GTCTCCTGCAATTCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGGAATTGCAGGAGACCCGTTGAATGTTGTATCTaGTCTCAAATAGCTATGGGA | + |
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Preference number: 2 (lower is better) Translates to: GAWHWRSSSGCTGNCRRPVECCI*SQIAMG Trigger: TCCCATAGCTATTTGAGACCAGATACAACATTCAAC...GGGTCTCCTGCAATTCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CAA 90 bp | CCCAGCAAAGTGGCTGGAATTTTAGGTCCCAGTTCTGACATATCCTaGGGTATCCTTGGGCAAGTTAAAGGTCTCTGTGCCTGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PSKVAGILGPSSDIS*GILGQVKGLCAWLP Trigger: AGGAAGCCAGGCACAGAGACCTTTAACTTGCCCAAGGATACCCAAGGATATGTCAGAACTGGGACCTAAAATTCCAGCCACTTTGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGCAGAAGTGCAGAGGTCACACAGTCTTGCAGACCACAGGCTCACCCATGTTTGTCATTTGTCTCTaGCATGTCTGTTCCCACATC | + |
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Preference number: 2 (lower is better) Translates to: MEQKCRGHTVLQTTGSPMFVICL*HVCSHI Trigger: GATGTGGGAACAGACATGGCAGAGACAAATGACAAA...CATGGGTGAGCCTGTGGTCTGCAAGACTGTGTGACCTCTGCACTTCTGCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CAA 90 bp | GAGTACTCGGTGAGAATATGCATGACCAATCTTTACAGGGCAAGATaGGTCCCCAGACATGAAACACAAATGTACACATACAACACATAC | + |
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Preference number: 2 (lower is better) Translates to: EYSVRICMTNLYRAR*VPRHETQMYTYNTY Trigger: GTATGTGTTGTATGTGTACATTTGTGTTTCATGTCTGGGGACCAATCTTGCCCTGTAAAGATTGGTCATGCATATTCTCACCGAGTACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CAA 90 bp | AGTCTTCCAAGTGCTGGATTACAGGTGTGCTCTATCATGTCCCACTaGAAATCTGGCTATATGTATTATCTGTTGAATGTTGTATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SLPSAGLQVCSIMSH*KSGYMYYLLNVVSG Trigger: ACCAGATACAACATTCAACAGATAATACATATAGCCAGATTTCAAGTGGGACATGATAGAGCACACCTGTAATCCAGCACTTGGAAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CCA 72 bp | TGCCATGAGGGTGGCAGCCAGCTTGGGGACCTGGGATaGGGAAAGGCAGTAACCTTGTGGAGAGCCCCGCCC | + |
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Preference number: 3 (lower is better) Translates to: CHEGGSQLGDLG*GKAVTLWRAPP Trigger: GGGCGGGGCTCTCCACAAGGTTACTGCCTTTCCCCATCCCAGGTCCCCAAGCTGGCTGCCACCCTCATGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CCA 72 bp | AAACAGGCCCCTGAGCGAGGAGGATGCTCTCGTAGCTaGGTGGGCGTGAGAAGGATGCTGACCCCAGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: KQAPERGGCSRS*VGVRRMLTPAG Trigger: CCCTGCTGGGGTCAGCATCCTTCTCACGCCCACCCAGCTACGAGAGCATCCTCCTCGCTCAGGGGCCTGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| 3UTR GCA 72 bp | GCTAGGGCTCAGGAGCTCAGCCCACAACAGGAAGTTTaGTTAGGGCAGGTGTGCAGCCCTGAAGCCAGCGCC | + |
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Preference number: 3 (lower is better) Translates to: ARAQELSPQQEV*LGQVCSPEASA Trigger: GGCGCTGGCTTCAGGGCTGCACACCTGCCCTAAGCAAACTTCCTGTTGTGGGCTGAGCTCCTGAGCCCTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR GCA 72 bp | TCCCCTGGGGCATGGCACTGGAGGTCTTCTTCAGGCTaGACAGGGAATTGCAGGAGACCCTCAGCCAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: SPGAWHWRSSSG*TGNCRRPSASG Trigger: TCCACTGGCTGAGGGTCTCCTGCAATTCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCCAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| 3UTR CCA 72 bp | CCTGCAACTCTCCTGCAGCCTGAGCTCAGACAGGGCTaGAGCCTGCAGCACTCAATCCAGAAACAGGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PATLLQPELRQG*SLQHSIQKQAP Trigger: AGGGGCCTGTTTCTGGATTGAGTGCTGCAGGCTCCAGCCCTGTCTGAGCTCAGGCTGCAGGAGAGTTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR TCA 72 bp | CTTCCTATGGGGTTCTTGGCCCCTGTGCTTCTCTGGTaGGCTTGGCTGTTGCCTCCTCCTGCAAGGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPMGFLAPVLLW*AWLLPPPARLP Trigger: GGGAAGCCTTGCAGGAGGAGGCAACAGCCAAGCTCACCAGAGAAGCACAGGGGCCAAGAACCCCATAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGAGGAGGATGCTCTCGTAGCTGGGTGGGCGTGAGAAGGATGCTGACCCCAGTACAGAGCAAGGCCTaGTCCAGTGGAGGAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ERGGCSRSWVGVRRMLTPVQSKA*SSGGIS Trigger: TGAGATTCCTCCACTGGACAAGGCCTTGCTCTGTAC...TGGGGTCAGCATCCTTCTCACGCCCACCCAGCTACGAGAGCATCCTCCTCGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | GAGGAAGAGCAGGGGAAGCTAAGGATGCAAGCCGTGTaGAATGCACACCCACCACGGTCATCTCTCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: EEEQGKLRMQAV*NAHPPRSSLRS Trigger: GCTCCTGAGAGATGACCGTGGTGGGTGTGCATTGCACACGGCTTGCATCCTTAGCTTCCCCTGCTCTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | TTGTTTTCCACGGAGTCCCCATACTGCTCTCTGAGCTaGTCTGAGACCAGGAGGGTGAGCCTGCCTCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LFSTESPYCSLS*SETRRVSLPPG Trigger: ACCAGGAGGCAGGCTCACCCTCCTGGTCTCAGAGCAGCTCAGAGAGCAGTATGGGGACTCCGTGGAAAACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | CATCAGCTCTCCCTCCTCCTCATACTTCTCCACCTCTaGTCTCTTCCCGCACTTCTTGCTGCCACCACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HQLSLLLILLHL*SLPALLAATTP Trigger: GGGAGTGGTGGCAGCAAGAAGTGCGGGAAGAGAGCAGAGGTGGAGAAGTATGAGGAGGAGGGAGAGCTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR TCA 72 bp | TCTCCTGCATGCCAGGGAGACAGGGGAGTCTCCTTATaGAGCTTGCTGGAGCAGCTGCCAACATCAGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPACQGDRGVSL*SLLEQLPTSAL Trigger: GAGAGCTGATGTTGGCAGCTGCTCCAGCAAGCTTCATAAGGAGACTCCCCTGTCTCCCTGGCATGCAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAAGAGGCTGTTTAGCAGGACCAGCTCAAAACTCTCCTGCATGCCAGGGAAGAGGTCACACAGTCTaGCAGACCACAGGCTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: QERGCLAGPAQNSPACQGRGHTV*QTTGSP Trigger: GGGTGAGCCTGTGGTCTGCAAGACTGTGTGACCTCT...TCCCTGGCATGCAGGAGAGTTTTGAGCTGGTCCTGCTAAACAGCCTCTTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR CCA 72 bp | CCTCTTGTTTCTCAAGGACCCTTCCTATGGGGTTCTTaGCCCCTGTGCTTCTCTGGTGAGCTTGGCTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLVSQGPFLWGS*PLCFSGELGCC Trigger: GCAACAGCCAAGCTCACCAGAGAAGCACAGGGGCCAAGAACCCCATAGGAAGGGTCCTTGAGAAACAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR TCA 72 bp | CTTCCAACAGGCCTACTGTGTGCTGGGCACCTACTGTaGGCTGCTCCCTCATATCAACAACCTCAATGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPTGLLCAGHLL*AAPSYQQPQCP Trigger: GGGACATTGAGGTTGTTGATATGAGGGAGCAGCTCACAGTAGGTGCCCAGCACACAGTAGGCCTGTTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR TCA 72 bp | GTCTGTAAAACAGGCCTAATCCCTACATCCTCCCTGTaGGCAGCCCAGGCTCAGCCTGTTCAAGACCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VCKTGLIPTSSL*AAQAQPVQDQD Trigger: GTCTTGGTCTTGAACAGGCTGAGCCTGGGCTGCTCACAGGGAGGATGTAGGGATTAGGCCTGTTTTACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR TCA 72 bp | AGAGCAGGAGGAAGCCCCACCCACCTCACAGAGGGATaGGTAGAAAGCACATCAGCTGAATGTACAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RAGGSPTHLTEG*VESTSAECTVL Trigger: GAGGACTGTACATTCAGCTGATGTGCTTTCTACTCATCCCTCTGTGAGGTGGGTGGGGCTTCCTCCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | TTACCTAGGAGACGAAGCTCTGGGAGGGTGTGTGGGTaGATCATCCCACACGTTTGGTATAGCATCCGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPRRRSSGRVCG*IIPHVWYSIRC Trigger: ACAGCGGATGCTATACCAAACGTGTGGGATGATGCACCCACACACCCTCCCAGAGCTTCGTCTCCTAGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | TCCTTATGGAGCAGAAGTGCAGAGGTCACACAGTCTTaGAGACCACAGGCTCACCCATGTGAGCTGCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SLWSRSAEVTQS*RPQAHPCELHV Trigger: TACATGCAGCTCACATGGGTGAGCCTGTGGTCTGCAAGACTGTGTGACCTCTGCACTTCTGCTCCATAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | AAGAGGCTGTTTAGCAGGACCAGCTCAAAACTCTCCTaGATGCCAGGGAGACAGGGGAGTCTCCTTATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KRLFSRTSSKLS*MPGRQGSLLMK Trigger: CTTCATAAGGAGACTCCCCTGTCTCCCTGGCATGCAGGAGAGTTTTGAGCTGGTCCTGCTAAACAGCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR CCA 72 bp | TTGGGTATCCTTGGGCAAGTTAAAGGTCTCTGTGCCTaGCTTCCTCTTCCACAGGGAAGTTCTGGCTACGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGILGQVKGLCA*LPLPQGSSGYD Trigger: GTCGTAGCCAGAACTTCCCTGTGGAAGAGGAAGCCAGGCACAGAGACCTTTAACTTGCCCAAGGATACCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR CCA 72 bp | AGGCTGCACAGGGAATTGCAGGAGACCCTCAGCCAGTaGATAGTGCATGGTCTCCTCATAAGTGGAAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: RLHRELQETLSQ*IVHGLLISGND Trigger: GTCATTTCCACTTATGAGGAGACCATGCACTATCCACTGGCTGAGGGTCTCCTGCAATTCCCTGTGCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
||
| 3UTR TCA 72 bp | GGTCACACAGTCTTGCAGACCACAGGCTCACCCATGTaGGCTGCATGTAACAGAAAAAGCCTCCTACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GHTVLQTTGSPM*AACNRKSLLQT Trigger: TGTCTGTAGGAGGCTTTTTCTGTTACATGCAGCTCACATGGGTGAGCCTGTGGTCTGCAAGACTGTGTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | TTCCAAGAAGATGTGCTCAAAAGCTGGTCATGGAGATaGGTGCCTGTAATCCCAGCTCTTGGGACAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FQEDVLKSWSWR*VPVIPALGTGG Trigger: TCCTCCTGTCCCAAGAGCTGGGATTACAGGCACGCATCTCCATGACCAGCTTTTGAGCACATCTTCTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
||
| 3UTR CCA 72 bp | AAAAAGCCTCCTACAGACAGCAATGGTGGTTCCCGGTaGCATAAAGGTACAAGCAGGCAGAGGGTGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KKPPTDSNGGSR*HKGTSRQRVEN Trigger: ATTCTCCACCCTCTGCCTGCTTGTACCTTTATGCCACCGGGAACCACCATTGCTGTCTGTAGGAGGCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR CCA 72 bp | TCCAACCAGTTCCAAGGAGCACAGGTTAGCTCCTTATaGAGCAGAAGTGCAGAGGTCACACAGTCTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNQFQGAQVSSL*SRSAEVTQSCR Trigger: TCTGCAAGACTGTGTGACCTCTGCACTTCTGCTCCATAAGGAGCTAACCTGTGCTCCTTGGAACTGGTTGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCGTTCTATCTCAGTCTTCCAAGTGCTGGATTACAGGTGTGCTCTATCATGTCCTTCCTATGGGGTTCTaGGCCCCTGTGCTTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IVLSQSSKCWITGVLYHVLPMGF*APVLLW Trigger: CCAGAGAAGCACAGGGGCCAAGAACCCCATAGGAAG...GACATGATAGAGCACACCTGTAATCCAGCACTTGGAAGACTGAGATAGAACGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | CATAAAGGTACAAGCAGGCAGAGGGTGGAGAATGCATaGAGGCTCCAGATCCAAGGGGTGCTTTGTAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: HKGTSRQRVENA*RLQIQGVLCRI Trigger: TATTCTACAAAGCACCCCTTGGATCTGGAGCCTGCATGCATTCTCCACCCTCTGCCTGCTTGTACCTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | TACCTAGTACACTCTCAACACAGATCTCTGTGGTTGTaGGGTGTGGCCATGCACAGAGATCAGGATAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: YLVHSQHRSLWL*GVAMHRDQDSL Trigger: AAGGCTATCCTGATCTCTGTGCATGGCCACACCGCACAACCACAGAGATCTGTGTTGAGAGTGTACTAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR CCA 72 bp | GACAGCCTCCTTAGGAGGCAGACCACAGCACATCTATaGGGATCAGATTCCAAGAAGATGTGCTCAAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DSLLRRQTTAHL*GSDSKKMCSKA Trigger: AGCTTTTGAGCACATCTTCTTGGAATCTGATCCCCATAGATGTGCTGTGGTCTGCCTCCTAAGGAGGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239070.2 |
||
| 3UTR GCA 72 bp | GCCTGGAACTCGATCGTTCTATCTCAGTCTTCCAAGTaGTGGATTACAGGTGTGCTCTATCATGTCCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: AWNSIVLSQSSK*WITGVLYHVPL Trigger: AAGTGGGACATGATAGAGCACACCTGTAATCCAGCACTTGGAAGACTGAGATAGAACGATCGAGTTCCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR TCA 72 bp | TCCGCTGTGCTGAGGTCCTGCACTGAGAAGAGCAAATaGTGGTCTCTTAAAACCTTAAAAGGTTCAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SAVLRSCTEKSK*WSLKTLKGSAL Trigger: CAGAGCTGAACCTTTTAAGGTTTTAAGAGACCATCATTTGCTCTTCTCAGTGCAGGACCTCAGCACAGCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR TCA 72 bp | TTACAAGAGTACAAGAATACAAGAACGCAGGGAACTTaGGCCTTTGCAAGGTCCTGTCTTAGTGTATGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: LQEYKNTRTQGT*AFARSCLSVWA Trigger: CGCCCATACACTAAGACAGGACCTTGCAAAGGCTCAAGTTCCCTGCGTTCTTGTATTCTTGTACTCTTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | GACATAATAAAGTGGGGTTTATTTAAAGCCAACTCATaGTCACACAGCAACGGATGCATAAACAGCCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DIIKWGLFKANS*SHSNGCINSPQ Trigger: CTGGGGGCTGTTTATGCATCCGTTGCTGTGTGAGCATGAGTTGGCTTTAAATAAACCCCACTTTATTATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
||
| 3UTR GCA 72 bp | GTGCTTTGTAGAATAAATGAGTACTCGGTGAGAATATaGATGACCAATCTTTACAGGGCAAGATTGGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VLCRINEYSVRI*MTNLYRARLVP Trigger: GGGGACCAATCTTGCCCTGTAAAGATTGGTCATGCATATTCTCACCGAGTACTCATTTATTCTACAAAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR GCA 72 bp | TTCTATCTCAGTCTTCCAAGTGCTGGATTACAGGTGTaGTCTATCATGTCCCACTTGAAATCTGGCTATATG | + |
|
Preference number: 3 (lower is better) Translates to: FYLSLPSAGLQV*SIMSHLKSGYM Trigger: CATATAGCCAGATTTCAAGTGGGACATGATAGAGCACACCTGTAATCCAGCACTTGGAAGACTGAGATAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR CCA 72 bp | GTACACATACAACACATACAGACCACAGCACATCTATaGGGATCAGATTCCAAGAAGATGTGCTCAAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VHIQHIQTTAHL*GSDSKKMCSKA Trigger: AGCTTTTGAGCACATCTTCTTGGAATCTGATCCCCATAGATGTGCTGTGGTCTGTATGTGTTGTATGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGGTTAGGGGAGCCTGCCTCCTGGTaGCCTGCCATGAGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAVNPVLVEASSKARWLGEPASW*PAMRVA Trigger: TGCCACCCTCATGGCAGGTCACCAGGAGGCAGGCTC...CCCTAACCAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239147.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGGGCATCCCCTGGGGCATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGAACCACCAGGACCACTaGGCCACCGACCGTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQGIPWGMALEVFFRLHRNHQDH*ATDRHA Trigger: TGCATGACGGTCGGTGGCTCAGTGGTCCTGGTGGTT...CCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCCAGGGGATGCCCTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGGTTAGGGCTCTCTGAGCTGCTCTaGGACCAGGAGGGTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAVNPVLVEASSKARWLGLSELL*DQEGEP Trigger: AGGCTCACCCTCCTGGTCTCAGAGCAGCTCAGAGAG...CCCTAACCAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239147.2 |
||
| CDS-3UTR TCA 90 bp | TTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGAACCACCAGGACCACTaGGCCACCGACCGTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNACCEPSPGGGLEQSSLNHQDH*ATDRHA Trigger: TGCATGACGGTCGGTGGCTCAGTGGTCCTGGTGGTT...CAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCGTAGCTGGGTGGGCGTGAGAAGGATGCTGACCCCAGCAGGGCATCCCGAAGTCCCCCTGGCTTaGCTTCTTTGTCCTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSRSWVGVRRMLTPAGHPEVPLA*LLCPFL Trigger: CAGGAAAGGACAAAGAAGTCAAGCCAGGGGGACTTC...GGGATGCCCTGCTGGGGTCAGCATCCTTCTCACGCCCACCCAGCTACGAGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
||
| CDS-3UTR TCA 90 bp | GCAATAGACCTCTTGTTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCCCTGGTGACCTGCCATaGGGGTGGCAGCCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AIDLLLNACCEPSPGGGLPGDLP*GWQPAW Trigger: CCAAGCTGGCTGCCACCCTCATGGCAGGTCACCAGG...GAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAACAAGAGGTCTATTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239147.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGGTTAGGGAGACTTGAGCCAAGTTaGGGGCATCTCGGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PAVNPVLVEASSKARWLGRLEPS*GHLGRW Trigger: CCATCTCCCGAGATGCCCCCAACTTGGCTCAAGTCT...CCCTAACCAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCATCCCCTGGGGCATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGGAAAGACTTGAGCCAAGTTaGGGGCATCTCGGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QGIPWGMALEVFFRLHRERLEPS*GHLGRW Trigger: CCATCTCCCGAGATGCCCCCAACTTGGCTCAAGTCT...TTCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCCAGGGGATGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTGTTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCCCCCATACTGCTCTCTaGGCTGCTCTGAGACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLNACCEPSPGGGLEQSPHTAL*AALRPG Trigger: TCCTGGTCTCAGAGCAGCTCAGAGAGCAGTATGGGG...GCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAACAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239147.2 |
||
| CDS-3UTR TCA 90 bp | AATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGGTTGAAGTCCCCCTGGCTTaGCTTCTTTGTCCTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NACCEPSPGGGLEQSSLVEVPLA*LLCPFL Trigger: CAGGAAAGGACAAAGAAGTCAAGCCAGGGGGACTTC...AACCAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGGTTAGGGTTCTTTGTCCTTTCCTaGATGGACCAAAGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAVNPVLVEASSKARWLGFFVLS*MDQSRP Trigger: TGGCCTGCTTTGGTCCATCCAGGAAAGGACAAAGAA...CCCTAACCAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
||
| 3UTR CAA 72 bp | GCACTCAGTCTCTTACCTGGCCCTGACCGTGCCCTCTaGTTTCTCAAGGACCCTTCCTATGGGGTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSLLPGPDRAL*FLKDPSYGVLG Trigger: GCCAAGAACCCCATAGGAAGGGTCCTTGAGAAACAAGAGGGCACGGTCAGGGCCAGGTAAGAGACTGAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| 3UTR CAA 72 bp | ACCCCACCTACACCCACCTTTGTAGGTCAGGGGAAGTaGTCACTTCCAACAGGCCTACTGTGTGCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPPTPTFVGQGK*SLPTGLLCAGH Trigger: GTGCCCAGCACACAGTAGGCCTGTTGGAAGTGACAACTTCCCCTGACCTACAAAGGTGGGTGTAGGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGGAGCACAGGTTAGCTCCTTATGGAGCAGAAGTGCAGAGGTCACACAGAACCACCAGGACCACTaGGCCACCGACCGTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQGAQVSSLWSRSAEVTQNHQDH*ATDRHA Trigger: TGCATGACGGTCGGTGGCTCAGTGGTCCTGGTGGTT...CTGTGTGACCTCTGCACTTCTGCTCCATAAGGAGCTAACCTGTGCTCCTTGGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
||
| CDS-3UTR GCA 90 bp | TTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGAGGTCTTCTTCAGGCTaGACAGGGAATTGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNACCEPSPGGGLEQSSLRSSSG*TGNCRR Trigger: TCTCCTGCAATTCCCTGTGCAGCCTGAAGAAGACCT...CAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238833.2 ENSMUST00000239147.2 |
||
| CDS-3UTR GCA 90 bp | GCAATAGACCTCTTGTTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGACAGGGCTGGAGCCTaGAGCACTCAATCCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AIDLLLNACCEPSPGGGLDRAGA*STQSRN Trigger: GTTTCTGGATTGAGTGCTGCAGGCTCCAGCCCTGTC...GAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAACAAGAGGTCTATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238833.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGGAATTGCAGGAGACCCTTGTCCTTTCCTGGATaGACCAAAGCAGGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAWHWRSSSGCTGNCRRPLSFPG*TKAGQR Trigger: TCTTTGGCCTGCTTTGGTCCATCCAGGAAAGGACAA...GGGTCTCCTGCAATTCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| 3UTR CAA 72 bp | ATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGGAATaGCAGGAGACCCTCAGCCAGTGGATAGTGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: MALEVFFRLHRE*QETLSQWIVHG Trigger: ACCATGCACTATCCACTGGCTGAGGGTCTCCTGCAATTCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| 3UTR CAA 72 bp | CGGATGCATAAACAGCCCCCAGCAATAGACCTCTTGTaGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RMHKQPPAIDLL*NACCEPSPGGG Trigger: GCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAACAAGAGGTCTATTGCTGGGGGCTGTTTATGCATCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
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| CDS-3UTR CCA 90 bp | AGCCTGCAGCACTCAATCCAGAAACAGGCCCCTGAGCGAGGAGGATGCTCTCGTTTCTTTGTCCTTTCCTaGATGGACCAAAGCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLQHSIQKQAPERGGCSRFFVLS*MDQSRP Trigger: TGGCCTGCTTTGGTCCATCCAGGAAAGGACAAAGAA...ACGAGAGCATCCTCCTCGCTCAGGGGCCTGTTTCTGGATTGAGTGCTGCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| CDS-3UTR CCA 90 bp | TTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGTTCTTTGTCCTTTCCTaGATGGACCAAAGCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LNACCEPSPGGGLEQSSLFFVLS*MDQSRP Trigger: TGGCCTGCTTTGGTCCATCCAGGAAAGGACAAAGAA...CAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
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| 3UTR CAA 72 bp | CGGTACCTAGTACACTCTCAACACAGATCTCTGTGGTaGTGCGGTGTGGCCATGCACAGAGATCAGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: RYLVHSQHRSLW*CGVAMHRDQDS Trigger: GCTATCCTGATCTCTGTGCATGGCCACACCGCACAACCACAGAGATCTGTGTTGAGAGTGTACTAGGTACCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| CDS-3UTR CCA 90 bp | AGTTCTGACATATCCTTGGGTATCCTTGGGCAAGTTAAAGGTCTCTGTGCCTGGAGACTTGAGCCAAGTTaGGGGCATCTCGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SSDISLGILGQVKGLCAWRLEPS*GHLGRW Trigger: CCATCTCCCGAGATGCCCCCAACTTGGCTCAAGTCT...CCAGGCACAGAGACCTTTAACTTGCCCAAGGATACCCAAGGATATGTCAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| CDS-3UTR CCA 90 bp | GGAATTGCAGGAGACCCTCAGCCAGTGGATAGTGCATGGTCTCCTCATAAGTGGTTCTTTGTCCTTTCCTaGATGGACCAAAGCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GIAGDPQPVDSAWSPHKWFFVLS*MDQSRP Trigger: TGGCCTGCTTTGGTCCATCCAGGAAAGGACAAAGAA...CCACTTATGAGGAGACCATGCACTATCCACTGGCTGAGGGTCTCCTGCAATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| 3UTR CAA 72 bp | GTAGGACTATGTCTGGACTCTACTCTGGTTTGTCATTaGTCTCTGCCATGTCTGTTCCCACATCCTAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VGLCLDSTLVCH*SLPCLFPHPRG Trigger: ACCCCTAGGATGTGGGAACAGACATGGCAGAGACAAATGACAAACCAGAGTAGAGTCCAGACATAGTCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CAA 72 bp | GTGGCTGGAATTTTAGGTCCCAGTTCTGACATATCCTaGGGTATCCTTGGGCAAGTTAAAGGTCTCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: VAGILGPSSDIS*GILGQVKGLCA Trigger: GGCACAGAGACCTTTAACTTGCCCAAGGATACCCAAGGATATGTCAGAACTGGGACCTAAAATTCCAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| CDS-3UTR CCA 90 bp | GACATAATAAAGTGGGGTTTATTTAAAGCCAACTCATGCTCACACAGCAACGGAAGACTTGAGCCAAGTTaGGGGCATCTCGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: DIIKWGLFKANSCSHSNGRLEPS*GHLGRW Trigger: CCATCTCCCGAGATGCCCCCAACTTGGCTCAAGTCT...TCCGTTGCTGTGTGAGCATGAGTTGGCTTTAAATAAACCCCACTTTATTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
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| 3UTR CAA 72 bp | CATCTCTGTAGGACTATGTCTGGACTCTACTCTGGTTaGTCATTTGTCTCTGCCATGTCTGTTCCCACATCC | + |
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Preference number: 4 (lower is better) Translates to: HLCRTMSGLYSG*SFVSAMSVPTS Trigger: GGATGTGGGAACAGACATGGCAGAGACAAATGACAAACCAGAGTAGAGTCCAGACATAGTCCTACAGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| 3UTR CAA 72 bp | AGTGCTGGATTACAGGTGTGCTCTATCATGTCCCACTaGAAATCTGGCTATATGTATTATCTGTTGAATGTT | + |
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Preference number: 4 (lower is better) Translates to: SAGLQVCSIMSH*KSGYMYYLLNV Trigger: AACATTCAACAGATAATACATATAGCCAGATTTCAAGTGGGACATGATAGAGCACACCTGTAATCCAGCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| CDS GCA 90 bp | GCTGCTTCACGGTGGCGGGCAGCGAGCCAGGCTGGACGGCAACACTaGCTTCGCTCCACGACGCGAAGCAGAGTGTCCCAACCACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: AASRWRAASQAGRQH*LRSTTRSRVSQPPG Trigger: TCCTGGTGGTTGGGACACTCTGCTTCGCGTCGTGGAGCGAAGGCAGTGTTGCCGTCCAGCCTGGCTCGCTGCCCGCCACCGTGAAGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS CCA 90 bp | ATCTCGGGAGATGGCTGCTTCACGGTGGCGGGCAGCGAGCCAGGCTaGACGGCAACACTGCCTTCGCTCCACGACGCGAAGCAGAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: ISGDGCFTVAGSEPG*TATLPSLHDAKQSV Trigger: GACACTCTGCTTCGCGTCGTGGAGCGAAGGCAGTGTTGCCGTCCAGCCTGGCTCGCTGCCCGCCACCGTGAAGCAGCCATCTCCCGAGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS TCA 90 bp | TGCTCTGAGACCAGGAGGGTGAGCCTGCCTCCTGGTGACCTGCCATaGGGGTGGCAGCCAGCTTGGGGACCTGTAGGGCTCCTTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: CSETRRVSLPPGDLP*GWQPAWGPVGLLHR Trigger: CCTGTGAAGGAGCCCTACAGGTCCCCAAGCTGGCTGCCACCCTCATGGCAGGTCACCAGGAGGCAGGCTCACCCTCCTGGTCTCAGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239147.2 |
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| CDS TCA 90 bp | TTCGCTCCACGACGCGAAGCAGAGTGTCCCAACCACCAGGACCACTaGGCCACCGACCGTCATGCAGTAACGCACAGTGGAGGCCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: FAPRREAECPNHQDH*ATDRHAVTHSGGHP Trigger: CGGGTGGCCTCCACTGTGCGTTACTGCATGACGGTCGGTGGCTCAGTGGTCCTGGTGGTTGGGACACTCTGCTTCGCGTCGTGGAGCGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 |
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| CDS GCA 90 bp | AGCAGAGTGTCCCAACCACCAGGACCACTGAGCCACCGACCGTCATaGAGTAACGCACAGTGGAGGCCACCCGGCCTCTGGCGCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: SRVSQPPGPLSHRPS*SNAQWRPPGLWRMS Trigger: AGACATGCGCCAGAGGCCGGGTGGCCTCCACTGTGCGTTACTGCATGACGGTCGGTGGCTCAGTGGTCCTGGTGGTTGGGACACTCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 |
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| CDS-3UTR CAA 90 bp | TTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGAGGCTGCACAGGGAATaGCAGGAGACCCTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LNACCEPSPGGGLEQSSLRLHRE*QETLSQ Trigger: CTGGCTGAGGGTCTCCTGCAATTCCCTGTGCAGCCT...CAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238833.2 ENSMUST00000239147.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGCATCCCCTGGGGCATGGCACTGGAGGTCTTCTTCAGGCTGCACAGGGAAGAAGTCCCCCTGGCTaGACTTCTTTGTCCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGHPLGHGTGGLLQAAQGRSPPG*TSLSFP Trigger: AGGAAAGGACAAAGAAGTCAAGCCAGGGGGACTTCT...TCCCTGTGCAGCCTGAAGAAGACCTCCAGTGCCATGCCCCAGGGGATGCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| CDS-3UTR CAA 90 bp | GCAATAGACCTCTTGTTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCAGGCTGCACAGGGAATaGCAGGAGACCCTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AIDLLLNACCEPSPGGGLRLHRE*QETLSQ Trigger: CTGGCTGAGGGTCTCCTGCAATTCCCTGTGCAGCCT...GAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAACAAGAGGTCTATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238833.2 ENSMUST00000239147.2 |
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| CDS-3UTR CAA 90 bp | AATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCGAGCAAAGCTCGCTGGTTCCTGGCTTGACTTCTTaGTCCTTTCCTGGATGGACC | + |
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Preference number: 5 (lower is better) Translates to: NACCEPSPGGGLEQSSLVPGLTS*SFPGWT Trigger: GGTCCATCCAGGAAAGGACAAAGAAGTCAAGCCAGG...AACCAGCGAGCTTTGCTCGAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCCTGCAGCACTCAATCCAGAAACAGGCCCCTGAGCGAGGAGGATGCTCTCCTGGCTTGACTTCTTaGTCCTTTCCTGGATGGACC | + |
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Preference number: 5 (lower is better) Translates to: WSLQHSIQKQAPERGGCSPGLTS*SFPGWT Trigger: GGTCCATCCAGGAAAGGACAAAGAAGTCAAGCCAGG...AGAGCATCCTCCTCGCTCAGGGGCCTGTTTCTGGATTGAGTGCTGCAGGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148907.2 ENSMUST00000239070.2 |
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| CDS CCA 90 bp | AGGGCTCCTTCACAGGGCACTCCACAGCAAGGCGATACAGGTCTCTaGAGAGTCGGTAGAAGTCCCCCTGGCTTGACTTCTTTGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: RAPSQGTPQQGDTGL*RVGRSPPGLTSLSF Trigger: AAAGGACAAAGAAGTCAAGCCAGGGGGACTTCTACCGACTCTCCAGAGACCTGTATCGCCTTGCTGTGGAGTGCCCTGTGAAGGAGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS-3UTR CAA 90 bp | GCAATAGACCTCTTGTTGAATGCCTGCTGTGAACCCAGTCCTGGTGGAGGCCTCCCTGGCTTGACTTCTTaGTCCTTTCCTGGATGGACC | + |
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Preference number: 5 (lower is better) Translates to: AIDLLLNACCEPSPGGGLPGLTS*SFPGWT Trigger: GGTCCATCCAGGAAAGGACAAAGAAGTCAAGCCAGG...GAGGCCTCCACCAGGACTGGGTTCACAGCAGGCATTCAACAAGAGGTCTATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239147.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTCACCCATGTGAGCTGCATGTAACAGAAAAAGCCTCCTACAGACAGCAACCTGGCTTGACTTCTTaGTCCTTTCCTGGATGGACC | + |
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Preference number: 5 (lower is better) Translates to: QAHPCELHVTEKASYRQQPGLTS*SFPGWT Trigger: GGTCCATCCAGGAAAGGACAAAGAAGTCAAGCCAGG...TTGCTGTCTGTAGGAGGCTTTTTCTGTTACATGCAGCTCACATGGGTGAGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148907.2 |
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| CDS GCA 72 bp | CGGTGGCGGGCAGCGAGCCAGGCTGGACGGCAACACTaGCTTCGCTCCACGACGCGAAGCAGAGTGTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: RWRAASQAGRQH*LRSTTRSRVSQ Trigger: TTGGGACACTCTGCTTCGCGTCGTGGAGCGAAGGCAGTGTTGCCGTCCAGCCTGGCTCGCTGCCCGCCACCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS CCA 72 bp | GATGGCTGCTTCACGGTGGCGGGCAGCGAGCCAGGCTaGACGGCAACACTGCCTTCGCTCCACGACGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: DGCFTVAGSEPG*TATLPSLHDAK Trigger: CTTCGCGTCGTGGAGCGAAGGCAGTGTTGCCGTCCAGCCTGGCTCGCTGCCCGCCACCGTGAAGCAGCCATC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS GCA 72 bp | GACTTGAGCCAAGTTGGGGGCATCTCGGGAGATGGCTaGTTCACGGTGGCGGGCAGCGAGCCAGGCTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: DLSQVGGISGDG*FTVAGSEPGWT Trigger: CGTCCAGCCTGGCTCGCTGCCCGCCACCGTGAAGCAGCCATCTCCCGAGATGCCCCCAACTTGGCTCAAGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS GCA 72 bp | TCCCAACCACCAGGACCACTGAGCCACCGACCGTCATaGAGTAACGCACAGTGGAGGCCACCCGGCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQPPGPLSHRPS*SNAQWRPPGLW Trigger: CCAGAGGCCGGGTGGCCTCCACTGTGCGTTACTGCATGACGGTCGGTGGCTCAGTGGTCCTGGTGGTTGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 |
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| CDS CCA 72 bp | CCACTGAGCCACCGACCGTCATGCAGTAACGCACAGTaGAGGCCACCCGGCCTCTGGCGCATGTCTGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: PLSHRPSCSNAQ*RPPGLWRMSGM Trigger: CATGCCAGACATGCGCCAGAGGCCGGGTGGCCTCCACTGTGCGTTACTGCATGACGGTCGGTGGCTCAGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000148907.2 ENSMUST00000238833.2 ENSMUST00000239070.2 |
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| CDS TCA 72 bp | CGACGCGAAGCAGAGTGTCCCAACCACCAGGACCACTaGGCCACCGACCGTCATGCAGTAACGCACAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: RREAECPNHQDH*ATDRHAVTHSG Trigger: TCCACTGTGCGTTACTGCATGACGGTCGGTGGCTCAGTGGTCCTGGTGGTTGGGACACTCTGCTTCGCGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 |
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| CDS CAA 72 bp | AGACCACCCACGATGCAGCAGAGGATGATGACAGACTaGAGCCAAGTTGGGGGCATCTCGGGAGATGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPTMQQRMMTD*SQVGGISGDGC Trigger: GCAGCCATCTCCCGAGATGCCCCCAACTTGGCTCAAGTCTGTCATCATCCTCTGCTGCATCGTGGGTGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS CAA 90 bp | AACAGAAGCAGACCACCCACGATGCAGCAGAGGATGATGACAGACTaGAGCCAAGTTGGGGGCATCTCGGGAGATGGCTGCTTCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: NRSRPPTMQQRMMTD*SQVGGISGDGCFTV Trigger: CACCGTGAAGCAGCCATCTCCCGAGATGCCCCCAACTTGGCTCAAGTCTGTCATCATCCTCTGCTGCATCGTGGGTGGTCTGCTTCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS CCA 72 bp | TCACAGGGCACTCCACAGCAAGGCGATACAGGTCTCTaGAGAGTCGGTAGAAGTCCCCCTGGCTTGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SQGTPQQGDTGL*RVGRSPPGLTS Trigger: AGAAGTCAAGCCAGGGGGACTTCTACCGACTCTCCAGAGACCTGTATCGCCTTGCTGTGGAGTGCCCTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS TCA 72 bp | CAGGTCTCTGGAGAGTCGGTAGAAGTCCCCCTGGCTTaGCTTCTTTGTCCTTTCCTGGATGGACCAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QVSGESVEVPLA*LLCPFLDGPKQ Trigger: CTGCTTTGGTCCATCCAGGAAAGGACAAAGAAGTCAAGCCAGGGGGACTTCTACCGACTCTCCAGAGACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS CCA 72 bp | AGTCCCCCTGGCTTGACTTCTTTGTCCTTTCCTGGATaGACCAAAGCAGGCCAAAGAACAGAAGCAGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: SPPGLTSLSFPG*TKAGQRTEADH Trigger: GTGGTCTGCTTCTGTTCTTTGGCCTGCTTTGGTCCATCCAGGAAAGGACAAAGAAGTCAAGCCAGGGGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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| CDS CAA 72 bp | ACAGGTCTCTGGAGAGTCGGTAGAAGTCCCCCTGGCTaGACTTCTTTGTCCTTTCCTGGATGGACCAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGLWRVGRSPPG*TSLSFPGWTKA Trigger: TGCTTTGGTCCATCCAGGAAAGGACAAAGAAGTCAAGCCAGGGGGACTTCTACCGACTCTCCAGAGACCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000148907.2 ENSMUST00000177702.2 ENSMUST00000238833.2 ENSMUST00000239070.2 ENSMUST00000239147.2 |
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