Pregenerated sensors for TMEM60 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045435

Ensembl transcript IDs: ENSMUST00000115259.3

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	CTACAAGTTCGTGCCACACCAATCCTGTTTCATAGTAGTTTAAGACTACACTTGTACTGTATAGCTTGTTaGACAGCAACAGAAATGAGA	+
Preference number: 2 (lower is better) Translates to: LQVRATPILFHSSLRLHLYCIAC*TATEMR Trigger: TCTCATTTCTGTTGCTGTTCAACAAGCTATACAGTA...CAAGTGTAGTCTTAAACTACTATGAAACAGGATTGGTGTGGCACGAACTTGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115259.3
3UTR-3UTR CAA 90 bp	TGGCTACAAGTTCGTGCCACACCAATCCTGTTTCATAGTAGTTTAAGACTACACATACTGTATAGCTTGTaGAACAGCAACAGAAATGAG	+
Preference number: 3 (lower is better) Translates to: WLQVRATPILFHSSLRLHILYSL*NSNRNE Trigger: CTCATTTCTGTTGCTGTTCAACAAGCTATACAGTAT...GTGTAGTCTTAAACTACTATGAAACAGGATTGGTGTGGCACGAACTTGTAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115259.3
CDS-3UTR GCA 90 bp	GGAATACTGTATAGCTTGTTGAACAGCAACAGAAATGAGACGATGTACTCGGAGGAACCAATTCCACGGTaGCTTCTCATCCAGTTTCAA	+
Preference number: 4 (lower is better) Translates to: GILYSLLNSNRNETMYSEEPIPR*LLIQFQ Trigger: TTGAAACTGGATGAGAAGGCACCGTGGAATTGGTTC...CTCCGAGTACATCGTCTCATTTCTGTTGCTGTTCAACAAGCTATACAGTATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115259.3
CDS-3UTR TCA 90 bp	GGAATACTGTATAGCTTGTTGAACAGCAACAGAAATGAGACGATGTACTCGGAGAGGCCCATAAAGGAATaGAGACATAGGAAAGATTCA	+
Preference number: 4 (lower is better) Translates to: GILYSLLNSNRNETMYSERPIKE*RHRKDS Trigger: TGAATCTTTCCTATGTCTTCATTCCTTTATGGGCCT...CTCCGAGTACATCGTCTCATTTCTGTTGCTGTTCAACAAGCTATACAGTATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115259.3
CDS CCA 90 bp	TTTCACAATCAGCATGACAAGAAGGATAGTGTCAAATATCCAGACTaGAATAAATATGAGGAACCAATTCCACGGTGCCTTCTCATCCAG	+
Preference number: 5 (lower is better) Translates to: FHNQHDKKDSVKYPD*NKYEEPIPRCLLIQ Trigger: CTGGATGAGAAGGCACCGTGGAATTGGTTCCTCATATTTATTCCAGTCTGGATATTTGACACTATCCTTCTTGTCATGCTGATTGTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115259.3
CDS GCA 72 bp	CCAGACTGGAATAAATATGAGGAACCAATTCCACGGTaGCTTCTCATCCAGTTTCAACACCAACATGATGAG	+
Preference number: 6 (lower is better) Translates to: PDWNKYEEPIPR*LLIQFQHQHDE Trigger: CTCATCATGTTGGTGTTGAAACTGGATGAGAAGGCACCGTGGAATTGGTTCCTCATATTTATTCCAGTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115259.3
CDS CCA 72 bp	CAGCATGACAAGAAGGATAGTGTCAAATATCCAGACTaGAATAAATATGAGGAACCAATTCCACGGTGCCTT	+
Preference number: 6 (lower is better) Translates to: QHDKKDSVKYPD*NKYEEPIPRCL Trigger: AAGGCACCGTGGAATTGGTTCCTCATATTTATTCCAGTCTGGATATTTGACACTATCCTTCTTGTCATGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115259.3

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