Pregenerated sensors for TMEM59L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035964Ensembl transcript IDs: ENSMUST00000045286.9
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGAGTTCTCACCACTCTGTCCTTGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGCATACTCAGAACATGTaGGGAATGTCAATAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: GVLTTLSLWGWVSRDKGKHTQNM*GMSISQ Trigger: CTGGCTTATTGACATTCCTCACATGTTCTGAGTATG...CTTCCCTTTGTCTCTGGAAACCCAACCCCACAAGGACAGAGTGGTGAGAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| 3UTR CCA 72 bp | AGGAATGTCAATAAGCCAGCCCCTGGGAAAGCAAGATaGGGGGCCAAGGAGGCCAGACCCTCCTCTCTCGGC | + |
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Preference number: 3 (lower is better) Translates to: RNVNKPAPGKAR*GAKEARPSSLG Trigger: GCCGAGAGAGGAGGGTCTGGCCTCCTTGGCCCCCCATCTTGCTTTCCCAGGGGCTGGCTTATTGACATTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| 3UTR TCA 72 bp | AAAGCAACACAGATGAGGTTCCATACTCAGAACATGTaGGGAATGTCAATAAGCCAGCCCCTGGGAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: KATQMRFHTQNM*GMSISQPLGKQ Trigger: TTGCTTTCCCAGGGGCTGGCTTATTGACATTCCTCACATGTTCTGAGTATGGAACCTCATCTGTGTTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR TCA 90 bp | CCAGAGACAAAGGGAAGGAACCTTAGCAGAGGGGAGCCCCTGAGACCTCAGCCCCGCTGCTGGCACCTCTaGGTGTCCCCGAGCTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: PETKGRNLSRGEPLRPQPRCWHL*VSPSCG Trigger: TCCGCAGCTCGGGGACACTCAGAGGTGCCAGCAGCG...GGGCTGAGGTCTCAGGGGCTCCCCTCTGCTAAGGTTCCTTCCCTTTGTCTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR GCA 90 bp | TGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGGAACCTTAGCAGAGGGGAGCCCCCCTCTGGCTCAGGCTaGGCAGGAGGCGAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CGVGFPETKGRNLSRGEPPSGSG*AGGEPG Trigger: CCCTGGCTCGCCTCCTGCGCAGCCTGAGCCAGAGGG...GGGCTCCCCTCTGCTAAGGTTCCTTCCCTTTGTCTCTGGAAACCCAACCCCACA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CCA 90 bp | GGAGGCCAGACCCTCCTCTCTCGGCCACTTAGGTCCACTTGTCTCAAGGGGACTTCAGGTTCAGGGATCTaGCCCCAGCACCCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: GGQTLLSRPLRSTCLKGTSGSGI*PQHPSL Trigger: CAGTGAGGGGTGCTGGGGCCAGATCCCTGAACCTGA...AGTCCCCTTGAGACAAGTGGACCTAAGTGGCCGAGAGAGGAGGGTCTGGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CCA 90 bp | GGTCCACTTGTCTCAAGGGGACTAAGGGATGTGCTGGCAAGAGAGGGAGGGAAGTCTAGGGCCTTGGGGTaGGACCTCCTCCAGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: GPLVSRGLRDVLAREGGKSRALG*DLLQVT Trigger: GGTGACCTGGAGGAGGTCCCACCCCAAGGCCCTAGA...CTTCCCTCCCTCTCTTGCCAGCACATCCCTTAGTCCCCTTGAGACAAGTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR GCA 90 bp | ACCCTCCTCTCTCGGCCACTTAGGTCCACTTGTCTCAAGGGGACTAAGGGATGTGGCTGGAACTTGAGGTaGTGGCCTGGTGTGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: TLLSRPLRSTCLKGTKGCGWNLR*WPGVVT Trigger: GGTCACCACACCAGGCCAGCACCTCAAGTTCCAGCC...ACATCCCTTAGTCCCCTTGAGACAAGTGGACCTAAGTGGCCGAGAGAGGAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR TCA 90 bp | GGAGTTCTCACCACTCTGTCCTTGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGGGTTGGGGTGACCAGTaGCGCCAACAACAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GVLTTLSLWGWVSRDKGKGWGDQ*RQQQQQ Trigger: CTGCTGCTGTTGTTGGCGTCACTGGTCACCCCAACC...CTTCCCTTTGTCTCTGGAAACCCAACCCCACAAGGACAGAGTGGTGAGAACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR GCA 90 bp | ACCCTCCTCTCTCGGCCACTTAGGTCCACTTGTCTCAAGGGGACTAAGGGATGTGGCCCGTTGCTCCGCTaGCTTCACGTAAGCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TLLSRPLRSTCLKGTKGCGPLLR*LHVSFC Trigger: ACAGAAGCTTACGTGAAGGCAGCGGAGCAACGGGCC...ACATCCCTTAGTCCCCTTGAGACAAGTGGACCTAAGTGGCCGAGAGAGGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CCA 90 bp | GGTCCACTTGTCTCAAGGGGACTAAGGGATGTGCTGGCAAGAGAGGGAGGGAAGTCCTTCTGCTCCAGCTaGGTCTCAGGTTCAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: GPLVSRGLRDVLAREGGKSFCSS*VSGSGI Trigger: GATCCCTGAACCTGAGACCCAGCTGGAGCAGAAGGA...CTTCCCTCCCTCTCTTGCCAGCACATCCCTTAGTCCCCTTGAGACAAGTGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CCA 90 bp | CACTCTGTCCTTGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGGAACCTTAGCAGCAGTTCTAGGGCCTTaGGGTGGGACCTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HSVLVGLGFQRQREGTLAAVLGP*GGTSSR Trigger: CCTGGAGGAGGTCCCACCCCAAGGCCCTAGAACTGC...TGCTAAGGTTCCTTCCCTTTGTCTCTGGAAACCCAACCCCACAAGGACAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CCA 90 bp | GGAGTTCTCACCACTCTGTCCTTGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGCTTGAGGTGCTGGCCTaGTGTGGTGACCAGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: GVLTTLSLWGWVSRDKGKLEVLA*CGDQSA Trigger: TGCACTCTGGTCACCACACCAGGCCAGCACCTCAAG...CTTCCCTTTGTCTCTGGAAACCCAACCCCACAAGGACAGAGTGGTGAGAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR GCA 90 bp | ACCCTCCTCTCTCGGCCACTTAGGTCCACTTGTCTCAAGGGGACTAAGGGATGTAAAGCCAAGTCCTTCTaGTCCAGCTGGGTCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TLLSRPLRSTCLKGTKGCKAKSF*SSWVSG Trigger: ACCTGAGACCCAGCTGGAGCAGAAGGACTTGGCTTT...ACATCCCTTAGTCCCCTTGAGACAAGTGGACCTAAGTGGCCGAGAGAGGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR GCA 90 bp | AGTTCTCACCACTCTGTCCTTGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGGACCTACAGGGTCCATGTaGAGTTCTAGGGCCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSHHSVLVGLGFQRQREGPTGSM*SSRALG Trigger: CCCCAAGGCCCTAGAACTGCACATGGACCCTGTAGG...TCCTTCCCTTTGTCTCTGGAAACCCAACCCCACAAGGACAGAGTGGTGAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CCA 90 bp | TGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGGAACCTTAGCAGAGGGGAGCCCCCTCAGACTCTACCTTaGCTTTGCTGGTCTTCACTC | + |
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Preference number: 4 (lower is better) Translates to: CGVGFPETKGRNLSRGEPPQTLP*LCWSSL Trigger: GAGTGAAGACCAGCAAAGCCAAGGTAGAGTCTGAGG...GGGCTCCCCTCTGCTAAGGTTCCTTCCCTTTGTCTCTGGAAACCCAACCCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR TCA 90 bp | ACCCTCCTCTCTCGGCCACTTAGGTCCACTTGTCTCAAGGGGACTAAGGGATGTTTCCGGTTGTCTGTCTaGAGGGAATATGTCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TLLSRPLRSTCLKGTKGCFRLSV*REYVQE Trigger: CTCCTGGACATATTCCCTTCAGACAGACAACCGGAA...ACATCCCTTAGTCCCCTTGAGACAAGTGGACCTAAGTGGCCGAGAGAGGAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR TCA 90 bp | GAGGTTCCATACTCAGAACATGTGAGGAATGTCAATAAGCCAGCCCCTGGGAAAGCTGGCCTGGTGTGGTaGCCAGAGTGCAGCAACTCA | + |
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Preference number: 4 (lower is better) Translates to: EVPYSEHVRNVNKPAPGKAGLVW*PECSNS Trigger: TGAGTTGCTGCACTCTGGTCACCACACCAGGCCAGC...TTTCCCAGGGGCTGGCTTATTGACATTCCTCACATGTTCTGAGTATGGAACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR GCA 90 bp | GGTCCACTTGTCTCAAGGGGACTAAGGGATGTGCTGGCAAGAGAGGGAGGGAAGTCACGTAAGCTTCTGTaGAGGCTGCTTCACATTCTG | + |
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Preference number: 4 (lower is better) Translates to: GPLVSRGLRDVLAREGGKSRKLL*RLLHIL Trigger: CAGAATGTGAAGCAGCCTGCACAGAAGCTTACGTGA...CTTCCCTCCCTCTCTTGCCAGCACATCCCTTAGTCCCCTTGAGACAAGTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR GCA 90 bp | AGTTCTCACCACTCTGTCCTTGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGGAGTCACCTCCACTCGCTaGAGATGGCTCCCTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SSHHSVLVGLGFQRQREGVTSTR*RWLPWN Trigger: ATTCCAAGGGAGCCATCTGCAGCGAGTGGAGGTGAC...TCCTTCCCTTTGTCTCTGGAAACCCAACCCCACAAGGACAGAGTGGTGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| 3UTR CAA 72 bp | ATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGTCCTaGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISSQEGVLTTLS*WGWVSRDKGKE Trigger: TTCCTTCCCTTTGTCTCTGGAAACCCAACCCCACAAGGACAGAGTGGTGAGAACTCCTTCCTGGGAGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR GCA 90 bp | ACCCTCCTCTCTCGGCCACTTAGGTCCACTTGTCTCAAGGGGACTAAGGGATGTAGCTTCTGTGCAGGCTaGTTCACATTCTGTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TLLSRPLRSTCLKGTKGCSFCAG*FTFCLC Trigger: ACAGAGACAGAATGTGAAGCAGCCTGCACAGAAGCT...ACATCCCTTAGTCCCCTTGAGACAAGTGGACCTAAGTGGCCGAGAGAGGAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CCA 90 bp | AAAGGTTTATATCTCCTTATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGTCCTGGAACTTGAGGTGCTaGCCTGGTGTGGTGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: KGLYLLISSQEGVLTTLSWNLRC*PGVVTR Trigger: TCTGGTCACCACACCAGGCCAGCACCTCAAGTTCCA...GGACAGAGTGGTGAGAACTCCTTCCTGGGAGGAGATAAGGAGATATAAACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR TCA 90 bp | ACAGATGAGGTTCCATACTCAGAACATGTGAGGAATGTCAATAAGCCAGCCCCTGCCGGGACATGCAACTaGGGAAGTCACTCTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: TDEVPYSEHVRNVNKPAPAGTCN*GSHSLV Trigger: AACAAGAGAGTGACTTCCTCAGTTGCATGTCCCGGC...AGGGGCTGGCTTATTGACATTCCTCACATGTTCTGAGTATGGAACCTCATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR TCA 90 bp | AAAGGTTTATATCTCCTTATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGTCCAACTCAGCCAGAGCATaGTCAGGATGGACAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KGLYLLISSQEGVLTTLSNSARA*SGWTGR Trigger: TCTTCCTGTCCATCCTGATCATGCTCTGGCTGAGTT...GGACAGAGTGGTGAGAACTCCTTCCTGGGAGGAGATAAGGAGATATAAACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR GCA 90 bp | TTTAAAGGTTTATATCTCCTTATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGACCAAGAGGCCCTTGTaGTGTTCTGCAGTTAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FKGLYLLISSQEGVLTTLTKRPL*CSAVRG Trigger: GCCTCTAACTGCAGAACAGCACAAGGGCCTCTTGGT...CAGAGTGGTGAGAACTCCTTCCTGGGAGGAGATAAGGAGATATAAACCTTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CCA 90 bp | TTTAAAGGTTTATATCTCCTTATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGGAGGATAGAAAGCCCTaGGCAGAACTCATCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: FKGLYLLISSQEGVLTTLEDRKP*AELIRS Trigger: CGACCTGATGAGTTCTGCCCAGGGCTTTCTATCCTC...CAGAGTGGTGAGAACTCCTTCCTGGGAGGAGATAAGGAGATATAAACCTTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CCA 90 bp | ACAGATGAGGTTCCATACTCAGAACATGTGAGGAATGTCAATAAGCCAGCCCCTTGCAGATGGCTCCCTTaGAATGCAAAGTTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TDEVPYSEHVRNVNKPAPCRWLP*NAKFSA Trigger: AGCAGAGAACTTTGCATTCCAAGGGAGCCATCTGCA...AGGGGCTGGCTTATTGACATTCCTCACATGTTCTGAGTATGGAACCTCATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 90 bp | ATAGCCTTGTTATTCGGGGACTCTGAGGGACCCTCTGGCTCAGGCTaGGCAGGAGGCGAGCCAGGGTGGTGCTGGCGACACCGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: IALLFGDSEGPSGSG*AGGEPGWCWRHRCW Trigger: CCAGCAGCGGTGTCGCCAGCACCACCCTGGCTCGCCTCCTGCGCAGCCTGAGCCAGAGGGTCCCTCAGAGTCCCCGAATAACAAGGCTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 90 bp | CCAGCTGGGTCTCAGGTTCAGGGATCTGGCCCCAGCACCCCTCACTaGAGGCCCGTTGCTCCGCTGCCTTCACGTAAGCTTCTGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PAGSQVQGSGPSTPH*RPVAPLPSRKLLCR Trigger: CCTGCACAGAAGCTTACGTGAAGGCAGCGGAGCAACGGGCCTGCAGTGAGGGGTGCTGGGGCCAGATCCCTGAACCTGAGACCCAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CCA 90 bp | AAAGCCAAGTCCTTCTGCTCCAGCTGGGTCTCAGGTTCAGGGATCTaGCCCCAGCACCCCTCACTGCAGGCCCGTTGCTCCGCTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: KAKSFCSSWVSGSGI*PQHPSLQARCSAAF Trigger: GAAGGCAGCGGAGCAACGGGCCTGCAGTGAGGGGTGCTGGGGCCAGATCCCTGAACCTGAGACCCAGCTGGAGCAGAAGGACTTGGCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CCA 90 bp | CGCTACAGAGCATGGAAAACAGGTACCGAAGGGAGAGGCGCCCCCTaGGCGGGTCCAAAGCCAAGTCCTTCTGCTCCAGCTGGGTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: RYRAWKTGTEGRGAP*AGPKPSPSAPAGSQ Trigger: CTGAGACCCAGCTGGAGCAGAAGGACTTGGCTTTGGACCCGCCCAGGGGGCGCCTCTCCCTTCGGTACCTGTTTTCCATGCTCTGTAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CCA 90 bp | CTTTGTCCAAGGGGCCTACAGGGTCCATGTGCAGTTCTAGGGCCTTaGGGTGGGACCTCCTCCAGGTCACCTCCACTCGCTGCAGATGGC | + |
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Preference number: 5 (lower is better) Translates to: LCPRGLQGPCAVLGP*GGTSSRSPPLAADG Trigger: GCCATCTGCAGCGAGTGGAGGTGACCTGGAGGAGGTCCCACCCCAAGGCCCTAGAACTGCACATGGACCCTGTAGGCCCCTTGGACAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 90 bp | AGGGATCTGGCCCCAGCACCCCTCACTGCAGGCCCGTTGCTCCGCTaGCTTCACGTAAGCTTCTGTGCAGGCTGCTTCACATTCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RDLAPAPLTAGPLLR*LHVSFCAGCFTFCL Trigger: GAGACAGAATGTGAAGCAGCCTGCACAGAAGCTTACGTGAAGGCAGCGGAGCAACGGGCCTGCAGTGAGGGGTGCTGGGGCCAGATCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 90 bp | GGCTTAGCCTTCCTCACTTTGTCCAAGGGGCCTACAGGGTCCATGTaGAGTTCTAGGGCCTTGGGGTGGGACCTCCTCCAGGTCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: GLAFLTLSKGPTGSM*SSRALGWDLLQVTS Trigger: GGAGGTGACCTGGAGGAGGTCCCACCCCAAGGCCCTAGAACTGCACATGGACCCTGTAGGCCCCTTGGACAAAGTGAGGAAGGCTAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CAA 90 bp | GGAGGCCAGACCCTCCTCTCTCGGCCACTTAGGTCCACTTGTCTCAAGGGGACTTCTGTCTCTGTGGCATaGGGCCTAGAGCTCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: GGQTLLSRPLRSTCLKGTSVSVA*GLELLA Trigger: GGCCAAGAGCTCTAGGCCCAATGCCACAGAGACAGA...AGTCCCCTTGAGACAAGTGGACCTAAGTGGCCGAGAGAGGAGGGTCTGGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CAA 90 bp | CCAGAGACAAAGGGAAGGAACCTTAGCAGAGGGGAGCCCCTGAGACCTCAGCCCGACTCTACCTTGGCTTaGCTGGTCTTCACTCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: PETKGRNLSRGEPLRPQPDSTLA*LVFTRG Trigger: GCCCCGAGTGAAGACCAGCAAAGCCAAGGTAGAGTC...GGGCTGAGGTCTCAGGGGCTCCCCTCTGCTAAGGTTCCTTCCCTTTGTCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CCA 90 bp | AGCCCGGAGCGCCGGGACATGCAACTGAGGAAGTCACTCTCTTGTTaGTCCTCAGACTCTACCTTGGCTTTGCTGGTCTTCACTCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SPERRDMQLRKSLSC*SSDSTLALLVFTRG Trigger: GCCCCGAGTGAAGACCAGCAAAGCCAAGGTAGAGTCTGAGGACCAACAAGAGAGTGACTTCCTCAGTTGCATGTCCCGGCGCTCCGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CAA 90 bp | GGAGGCCAGACCCTCCTCTCTCGGCCACTTAGGTCCACTTGTCTCAAGGGGACTTTAGCCTTCCTCACTTaGTCCAAGGGGCCTACAGGG | + |
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Preference number: 5 (lower is better) Translates to: GGQTLLSRPLRSTCLKGTLAFLT*SKGPTG Trigger: CCCTGTAGGCCCCTTGGACAAAGTGAGGAAGGCTAA...AGTCCCCTTGAGACAAGTGGACCTAAGTGGCCGAGAGAGGAGGGTCTGGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 90 bp | AAGAGGCCCTTGTGCTGTTCTGCAGTTAGAGGCTGGAACTTGAGGTaGTGGCCTGGTGTGGTGACCAGAGTGCAGCAACTCAGCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: KRPLCCSAVRGWNLR*WPGVVTRVQQLSQS Trigger: GCTCTGGCTGAGTTGCTGCACTCTGGTCACCACACCAGGCCAGCACCTCAAGTTCCAGCCTCTAACTGCAGAACAGCACAAGGGCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 90 bp | AGGGGTGGGTATAAGGGCCAGTCAGACTCCACCAAGAGGCCCTTGTaGTGTTCTGCAGTTAGAGGCTGGAACTTGAGGTGCTGGCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RGGYKGQSDSTKRPL*CSAVRGWNLRCWPG Trigger: ACCAGGCCAGCACCTCAAGTTCCAGCCTCTAACTGCAGAACAGCACAAGGGCCTCTTGGTGGAGTCTGACTGGCCCTTATACCCACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CCA 90 bp | AGGCCCTTGTGCTGTTCTGCAGTTAGAGGCTGGAACTTGAGGTGCTaGCCTGGTGTGGTGACCAGAGTGCAGCAACTCAGCCAGAGCATG | + |
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Preference number: 5 (lower is better) Translates to: RPLCCSAVRGWNLRC*PGVVTRVQQLSQSM Trigger: CATGCTCTGGCTGAGTTGCTGCACTCTGGTCACCACACCAGGCCAGCACCTCAAGTTCCAGCCTCTAACTGCAGAACAGCACAAGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS TCA 90 bp | AGAATAGGACCCATCGAGGCAGCCCGGAGCGCCGGGACATGCAACTaGGGAAGTCACTCTCTTGTTGGTCCTCAGACTCTACCTTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RIGPIEAARSAGTCN*GSHSLVGPQTLPWL Trigger: AAGCCAAGGTAGAGTCTGAGGACCAACAAGAGAGTGACTTCCTCAGTTGCATGTCCCGGCGCTCCGGGCTGCCTCGATGGGTCCTATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 90 bp | CCTCCTCCAGGTCACCTCCACTCGCTGCAGATGGCTCCCTTGGAATaGAAAGTTCTCTGCTACAGGCTGAGTCTGGAACACCACCACTTT | + |
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Preference number: 5 (lower is better) Translates to: PPPGHLHSLQMAPLE*KVLCYRLSLEHHHF Trigger: AAAGTGGTGGTGTTCCAGACTCAGCCTGTAGCAGAGAACTTTGCATTCCAAGGGAGCCATCTGCAGCGAGTGGAGGTGACCTGGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 90 bp | CACCTCCACTCGCTGCAGATGGCTCCCTTGGAATGCAAAGTTCTCTaGTACAGGCTGAGTCTGGAACACCACCACTTTCCGGTTGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: HLHSLQMAPLECKVL*YRLSLEHHHFPVVC Trigger: ACAGACAACCGGAAAGTGGTGGTGTTCCAGACTCAGCCTGTAGCAGAGAACTTTGCATTCCAAGGGAGCCATCTGCAGCGAGTGGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CAA 90 bp | TCAGAACATGTGAGGAATGTCAATAAGCCAGCCCCTGGGAAAGCAAGATGGGGGTTGGGCCTAGAGCTCTaGGCCACAAAGCGGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: SEHVRNVNKPAPGKARWGLGLEL*ATKRQM Trigger: CATCTGCCGCTTTGTGGCCAAGAGCTCTAGGCCCAA...CCCCCATCTTGCTTTCCCAGGGGCTGGCTTATTGACATTCCTCACATGTTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CAA 90 bp | GGAGTTCTCACCACTCTGTCCTTGTGGGGTTGGGTTTCCAGAGACAAAGGGAAGTCCACCAAGAGGCCCTaGTGCTGTTCTGCAGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: GVLTTLSLWGWVSRDKGKSTKRP*CCSAVR Trigger: TCTAACTGCAGAACAGCACAAGGGCCTCTTGGTGGA...CTTCCCTTTGTCTCTGGAAACCCAACCCCACAAGGACAGAGTGGTGAGAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CAA 90 bp | TTTAAAGGTTTATATCTCCTTATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGTGCAGTTCTAGGGCCTaGGGGTGGGACCTCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: FKGLYLLISSQEGVLTTLCSSRA*GWDLLQ Trigger: CTGGAGGAGGTCCCACCCCAAGGCCCTAGAACTGCA...CAGAGTGGTGAGAACTCCTTCCTGGGAGGAGATAAGGAGATATAAACCTTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CAA 90 bp | TTTAAAGGTTTATATCTCCTTATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGGTTAGAGGCTGGAACTaGAGGTGCTGGCCTGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: FKGLYLLISSQEGVLTTLVRGWN*RCWPGV Trigger: CACACCAGGCCAGCACCTCAAGTTCCAGCCTCTAAC...CAGAGTGGTGAGAACTCCTTCCTGGGAGGAGATAAGGAGATATAAACCTTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS-3UTR CAA 90 bp | TTTAAAGGTTTATATCTCCTTATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGCTGCAGATGGCTCCCTaGGAATGCAAAGTTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: FKGLYLLISSQEGVLTTLLQMAP*ECKVLC Trigger: GCAGAGAACTTTGCATTCCAAGGGAGCCATCTGCAG...CAGAGTGGTGAGAACTCCTTCCTGGGAGGAGATAAGGAGATATAAACCTTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 72 bp | AGGCGCCCCCTGGGCGGGTCCAAAGCCAAGTCCTTCTaGTCCAGCTGGGTCTCAGGTTCAGGGATCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRPLGGSKAKSF*SSWVSGSGIWP Trigger: GGGCCAGATCCCTGAACCTGAGACCCAGCTGGAGCAGAAGGACTTGGCTTTGGACCCGCCCAGGGGGCGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CCA 72 bp | TCCTTCTGCTCCAGCTGGGTCTCAGGTTCAGGGATCTaGCCCCAGCACCCCTCACTGCAGGCCCGTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFCSSWVSGSGI*PQHPSLQARCS Trigger: GGAGCAACGGGCCTGCAGTGAGGGGTGCTGGGGCCAGATCCCTGAACCTGAGACCCAGCTGGAGCAGAAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 72 bp | AAGGGGCCTACAGGGTCCATGTGCAGTTCTAGGGCCTaGGGGTGGGACCTCCTCCAGGTCACCTCCACTCGC | + |
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Preference number: 6 (lower is better) Translates to: KGPTGSMCSSRA*GWDLLQVTSTR Trigger: GCGAGTGGAGGTGACCTGGAGGAGGTCCCACCCCAAGGCCCTAGAACTGCACATGGACCCTGTAGGCCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CCA 72 bp | GCATGGAAAACAGGTACCGAAGGGAGAGGCGCCCCCTaGGCGGGTCCAAAGCCAAGTCCTTCTGCTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AWKTGTEGRGAP*AGPKPSPSAPA Trigger: AGCTGGAGCAGAAGGACTTGGCTTTGGACCCGCCCAGGGGGCGCCTCTCCCTTCGGTACCTGTTTTCCATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 90 bp | ACTTTGTCCAAGGGGCCTACAGGGTCCATGTGCAGTTCTAGGGCCTaGGGGTGGGACCTCCTCCAGGTCACCTCCACTCGCTGCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: TLSKGPTGSMCSSRA*GWDLLQVTSTRCRW Trigger: CCATCTGCAGCGAGTGGAGGTGACCTGGAGGAGGTCCCACCCCAAGGCCCTAGAACTGCACATGGACCCTGTAGGCCCCTTGGACAAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS TCA 72 bp | AGCACTGATCAGGATAGCCTTGTTATTCGGGGACTCTaGGGGACCCTCTGGCTCAGGCTGCGCAGGAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: STDQDSLVIRGL*GTLWLRLRRRR Trigger: TCGCCTCCTGCGCAGCCTGAGCCAGAGGGTCCCTCAGAGTCCCCGAATAACAAGGCTATCCTGATCAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS TCA 72 bp | CCCATCGAGGCAGCCCGGAGCGCCGGGACATGCAACTaGGGAAGTCACTCTCTTGTTGGTCCTCAGACTCTA | + |
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Preference number: 6 (lower is better) Translates to: PIEAARSAGTCN*GSHSLVGPQTL Trigger: TAGAGTCTGAGGACCAACAAGAGAGTGACTTCCTCAGTTGCATGTCCCGGCGCTCCGGGCTGCCTCGATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 72 bp | TTCCTCACTTTGTCCAAGGGGCCTACAGGGTCCATGTaGAGTTCTAGGGCCTTGGGGTGGGACCTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: FLTLSKGPTGSM*SSRALGWDLLQ Trigger: CTGGAGGAGGTCCCACCCCAAGGCCCTAGAACTGCACATGGACCCTGTAGGCCCCTTGGACAAAGTGAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 90 bp | CAGCCCGGAGCGCCGGGACATGCAACTGAGGAAGTCACTCTCTTGTaGGTCCTCAGACTCTACCTTGGCTTTGCTGGTCTTCACTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: QPGAPGHATEEVTLL*VLRLYLGFAGLHSG Trigger: CCCCGAGTGAAGACCAGCAAAGCCAAGGTAGAGTCTGAGGACCAACAAGAGAGTGACTTCCTCAGTTGCATGTCCCGGCGCTCCGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 90 bp | GGCAGGGGTGGGTATAAGGGCCAGTCAGACTCCACCAAGAGGCCCTaGTGCTGTTCTGCAGTTAGAGGCTGGAACTTGAGGTGCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GRGGYKGQSDSTKRP*CCSAVRGWNLRCWP Trigger: AGGCCAGCACCTCAAGTTCCAGCCTCTAACTGCAGAACAGCACAAGGGCCTCTTGGTGGAGTCTGACTGGCCCTTATACCCACCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 90 bp | GTGGGACCTCCTCCAGGTCACCTCCACTCGCTGCAGATGGCTCCCTaGGAATGCAAAGTTCTCTGCTACAGGCTGAGTCTGGAACACCAC | + |
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Preference number: 6 (lower is better) Translates to: VGPPPGHLHSLQMAP*ECKVLCYRLSLEHH Trigger: GTGGTGTTCCAGACTCAGCCTGTAGCAGAGAACTTTGCATTCCAAGGGAGCCATCTGCAGCGAGTGGAGGTGACCTGGAGGAGGTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 90 bp | AGGCAGCCCGGAGCGCCGGGACATGCAACTGAGGAAGTCACTCTCTaGTTGGTCCTCAGACTCTACCTTGGCTTTGCTGGTCTTCACTCG | + |
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Preference number: 6 (lower is better) Translates to: RQPGAPGHATEEVTL*LVLRLYLGFAGLHS Trigger: CGAGTGAAGACCAGCAAAGCCAAGGTAGAGTCTGAGGACCAACAAGAGAGTGACTTCCTCAGTTGCATGTCCCGGCGCTCCGGGCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 72 bp | TTGGGGTGGGACCTCCTCCAGGTCACCTCCACTCGCTaGAGATGGCTCCCTTGGAATGCAAAGTTCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LGWDLLQVTSTR*RWLPWNAKFSA Trigger: AGCAGAGAACTTTGCATTCCAAGGGAGCCATCTGCAGCGAGTGGAGGTGACCTGGAGGAGGTCCCACCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 72 bp | GCGTGGTCAAATCAAGCTTCAACTTGTAAGGAGGTGTaGTGTCCTCATAGGCAGGCGGCGGCAGGGGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: AWSNQASTCKEV*CPHRQAAAGVG Trigger: ACCCACCCCTGCCGCCGCCTGCCTATGAGGACAGCACACCTCCTTACAAGTTGAAGCTTGATTTGACCACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 90 bp | ACCTTGGCTTTGCTGGTCTTCACTCGGGGCTTAGCCTTCCTCACTTaGTCCAAGGGGCCTACAGGGTCCATGTGCAGTTCTAGGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: TLALLVFTRGLAFLT*SKGPTGSMCSSRAL Trigger: CAAGGCCCTAGAACTGCACATGGACCCTGTAGGCCCCTTGGACAAAGTGAGGAAGGCTAAGCCCCGAGTGAAGACCAGCAAAGCCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 72 bp | AGGCCCGTTGCTCCGCTGCCTTCACGTAAGCTTCTGTaGAGGCTGCTTCACATTCTGTCTCTGTGGCATTGG | + |
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Preference number: 6 (lower is better) Translates to: RPVAPLPSRKLL*RLLHILSLWHW Trigger: CCAATGCCACAGAGACAGAATGTGAAGCAGCCTGCACAGAAGCTTACGTGAAGGCAGCGGAGCAACGGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CCA 72 bp | ACCAAGAGGCCCTTGTGCTGTTCTGCAGTTAGAGGCTaGAACTTGAGGTGCTGGCCTGGTGTGGTGACCAGA | + |
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Preference number: 6 (lower is better) Translates to: TKRPLCCSAVRG*NLRCWPGVVTR Trigger: TCTGGTCACCACACCAGGCCAGCACCTCAAGTTCCAGCCTCTAACTGCAGAACAGCACAAGGGCCTCTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 72 bp | CGACAGCCACGCTCACAAGCACTGATCAGGATAGCCTaGTTATTCGGGGACTCTGAGGGACCCTCTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RQPRSQALIRIA*LFGDSEGPSGS Trigger: TGAGCCAGAGGGTCCCTCAGAGTCCCCGAATAACAAGGCTATCCTGATCAGTGCTTGTGAGCGTGGCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 72 bp | CCTCCAGGTCACCTCCACTCGCTGCAGATGGCTCCCTaGGAATGCAAAGTTCTCTGCTACAGGCTGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PPGHLHSLQMAP*ECKVLCYRLSL Trigger: CAGACTCAGCCTGTAGCAGAGAACTTTGCATTCCAAGGGAGCCATCTGCAGCGAGTGGAGGTGACCTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 72 bp | GGTCACCTCCACTCGCTGCAGATGGCTCCCTTGGAATaGAAAGTTCTCTGCTACAGGCTGAGTCTGGAACAC | + |
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Preference number: 6 (lower is better) Translates to: GHLHSLQMAPLE*KVLCYRLSLEH Trigger: GTGTTCCAGACTCAGCCTGTAGCAGAGAACTTTGCATTCCAAGGGAGCCATCTGCAGCGAGTGGAGGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 72 bp | TTGTGCTGTTCTGCAGTTAGAGGCTGGAACTTGAGGTaGTGGCCTGGTGTGGTGACCAGAGTGCAGCAACTC | + |
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Preference number: 6 (lower is better) Translates to: LCCSAVRGWNLR*WPGVVTRVQQL Trigger: GAGTTGCTGCACTCTGGTCACCACACCAGGCCAGCACCTCAAGTTCCAGCCTCTAACTGCAGAACAGCACAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 72 bp | TTGCTGGTCTTCACTCGGGGCTTAGCCTTCCTCACTTaGTCCAAGGGGCCTACAGGGTCCATGTGCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLVFTRGLAFLT*SKGPTGSMCSS Trigger: AGAACTGCACATGGACCCTGTAGGCCCCTTGGACAAAGTGAGGAAGGCTAAGCCCCGAGTGAAGACCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 72 bp | GGAGCGCCGGGACATGCAACTGAGGAAGTCACTCTCTaGTTGGTCCTCAGACTCTACCTTGGCTTTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GAPGHATEEVTL*LVLRLYLGFAG Trigger: ACCAGCAAAGCCAAGGTAGAGTCTGAGGACCAACAAGAGAGTGACTTCCTCAGTTGCATGTCCCGGCGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 72 bp | GGGTATAAGGGCCAGTCAGACTCCACCAAGAGGCCCTaGTGCTGTTCTGCAGTTAGAGGCTGGAACTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GYKGQSDSTKRP*CCSAVRGWNLR Trigger: CCTCAAGTTCCAGCCTCTAACTGCAGAACAGCACAAGGGCCTCTTGGTGGAGTCTGACTGGCCCTTATACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 72 bp | TCGCTGCAGATGGCTCCCTTGGAATGCAAAGTTCTCTaGTACAGGCTGAGTCTGGAACACCACCACTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: SLQMAPLECKVL*YRLSLEHHHFP Trigger: CGGAAAGTGGTGGTGTTCCAGACTCAGCCTGTAGCAGAGAACTTTGCATTCCAAGGGAGCCATCTGCAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS GCA 72 bp | TATAAGGGCCAGTCAGACTCCACCAAGAGGCCCTTGTaGTGTTCTGCAGTTAGAGGCTGGAACTTGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: YKGQSDSTKRPL*CSAVRGWNLRC Trigger: GCACCTCAAGTTCCAGCCTCTAACTGCAGAACAGCACAAGGGCCTCTTGGTGGAGTCTGACTGGCCCTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 72 bp | GCGCCGGGACATGCAACTGAGGAAGTCACTCTCTTGTaGGTCCTCAGACTCTACCTTGGCTTTGCTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: APGHATEEVTLL*VLRLYLGFAGL Trigger: AAGACCAGCAAAGCCAAGGTAGAGTCTGAGGACCAACAAGAGAGTGACTTCCTCAGTTGCATGTCCCGGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS TCA 72 bp | TGGCTCCCTTGGAATGCAAAGTTCTCTGCTACAGGCTaGGTCTGGAACACCACCACTTTCCGGTTGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: WLPWNAKFSATG*VWNTTTFRLSV Trigger: GACAGACAACCGGAAAGTGGTGGTGTTCCAGACTCAGCCTGTAGCAGAGAACTTTGCATTCCAAGGGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 72 bp | TCACTCTCTTGTTGGTCCTCAGACTCTACCTTGGCTTaGCTGGTCTTCACTCGGGGCTTAGCCTTCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: SLSCWSSDSTLA*LVFTRGLAFLT Trigger: AGTGAGGAAGGCTAAGCCCCGAGTGAAGACCAGCAAAGCCAAGGTAGAGTCTGAGGACCAACAAGAGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 90 bp | CTGAGGAAGTCACTCTCTTGTTGGTCCTCAGACTCTACCTTGGCTTaGCTGGTCTTCACTCGGGGCTTAGCCTTCCTCACTTTGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LRKSLSCWSSDSTLA*LVFTRGLAFLTLSK Trigger: CTTGGACAAAGTGAGGAAGGCTAAGCCCCGAGTGAAGACCAGCAAAGCCAAGGTAGAGTCTGAGGACCAACAAGAGAGTGACTTCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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| CDS CAA 90 bp | ATGCAACTGAGGAAGTCACTCTCTTGTTGGTCCTCAGACTCTACCTaGGCTTTGCTGGTCTTCACTCGGGGCTTAGCCTTCCTCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: MQLRKSLSCWSSDST*ALLVFTRGLAFLTL Trigger: CAAAGTGAGGAAGGCTAAGCCCCGAGTGAAGACCAGCAAAGCCAAGGTAGAGTCTGAGGACCAACAAGAGAGTGACTTCCTCAGTTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045286.9 |
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