Pregenerated sensors for TMEM53 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048772Ensembl transcript IDs: ENSMUST00000062824.12, ENSMUST00000106433.2, ENSMUST00000106434.8, ENSMUST00000125943.8
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGGAGCAACAGGCGCAGCACCGCAGGTCGGCGCTCCAGGATGGTTaGCAGAGCCCTCAGGGCCCCTATCAGGTTGCTATCGCCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: QEQQAQHRRSALQDG*QSPQGPYQVAIART Trigger: GGTCCTGGCGATAGCAACCTGATAGGGGCCCTGAGGGCTCTGGCAACCATCCTGGAGCGCCGACCTGCGGTGCTGCGCCTGTTGCTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS CCA 90 bp | CTGCCAGGAGCAACAGGCGCAGCACCGCAGGTCGGCGCTCCAGGATaGTTGCCAGAGCCCTCAGGGCCCCTATCAGGTTGCTATCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LPGATGAAPQVGAPG*LPEPSGPLSGCYRQ Trigger: CTGGCGATAGCAACCTGATAGGGGCCCTGAGGGCTCTGGCAACCATCCTGGAGCGCCGACCTGCGGTGCTGCGCCTGTTGCTCCTGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS GCA 90 bp | GGCGCTCCAGGATGGTTGCCAGAGCCCTCAGGGCCCCTATCAGGTTaGTATCGCCAGGACCACTGTCAAAGATGGTGCCCACCACATGCA | + |
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Preference number: 5 (lower is better) Translates to: GAPGWLPEPSGPLSG*YRQDHCQRWCPPHA Trigger: TGCATGTGGTGGGCACCATCTTTGACAGTGGTCCTGGCGATAGCAACCTGATAGGGGCCCTGAGGGCTCTGGCAACCATCCTGGAGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS GCA 90 bp | TGGAGCAAGCAGGAAGTGAAACAGGATCACCACCAGGGCAAATGCTaGCAGGAGCAACAGGCGCAGCACCGCAGGTCGGCGCTCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: WSKQEVKQDHHQGKC*QEQQAQHRRSALQD Trigger: ATCCTGGAGCGCCGACCTGCGGTGCTGCGCCTGTTGCTCCTGGCAGCATTTGCCCTGGTGGTGATCCTGTTTCACTTCCTGCTTGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS TCA 90 bp | ACATGCGCAGATGACACAAAGTCCACTCCACGCACCATGACCTGGTaGGCCAGGCGTGCCTCTACCATACGTTCCACATCCCTGGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: TCADDTKSTPRTMTW*ARRASTIRSTSLAE Trigger: CTCGGCCAGGGATGTGGAACGTATGGTAGAGGCACGCCTGGCTCACCAGGTCATGGTGCGTGGAGTGGACTTTGTGTCATCTGCGCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS GCA 90 bp | AGGTTGCTATCGCCAGGACCACTGTCAAAGATGGTGCCCACCACATaGAAATGGCGGAAGCGCTGGTGGGTCTGTAGGAGCTCCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: RLLSPGPLSKMVPTT*KWRKRWWVCRSSST Trigger: CGTGCTGGAGCTCCTACAGACCCACCAGCGCTTCCGCCATTTGCATGTGGTGGGCACCATCTTTGACAGTGGTCCTGGCGATAGCAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS GCA 90 bp | GGGCCCCTATCAGGTTGCTATCGCCAGGACCACTGTCAAAGATGGTaGCCACCACATGCAAATGGCGGAAGCGCTGGTGGGTCTGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: GPLSGCYRQDHCQRW*PPHANGGSAGGSVG Trigger: TCCTACAGACCCACCAGCGCTTCCGCCATTTGCATGTGGTGGGCACCATCTTTGACAGTGGTCCTGGCGATAGCAACCTGATAGGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS TCA 90 bp | CTTATCAGCTCTAGAGTAGAGGTAGAGTTCAGGCCAGCAGGAGCCTaGGTCCTGCAGCCTGTCGTAGAAGTGGGTGTGGAAGAGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LISSRVEVEFRPAGA*VLQPVVEVGVEEGS Trigger: ACTGCCCTCTTCCACACCCACTTCTACGACAGGCTGCAGGACTCAGGCTCCTGCTGGCCTGAACTCTACCTCTACTCTAGAGCTGATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS TCA 90 bp | TGTATAGTAAGTAGGATAGTCTCGGAGGTGGCTGACATGCGCAGATaGCACAAAGTCCACTCCACGCACCATGACCTGGTGAGCCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: CIVSRIVSEVADMRR*HKVHSTHHDLVSQA Trigger: CGCCTGGCTCACCAGGTCATGGTGCGTGGAGTGGACTTTGTGTCATCTGCGCATGTCAGCCACCTCCGAGACTATCCTACTTACTATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS TCA 90 bp | ATAGTCAAAGAGGAGCTCCAGCAGTTTCTGGGCTATCACGCGAAGTaGAGGGATGCCCAAGGACTCAGAGAAGAAGACCATGTGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: IVKEELQQFLGYHAK*RDAQGLREEDHVPG Trigger: CCCTGGCACATGGTCTTCTTCTCTGAGTCCTTGGGCATCCCTTCACTTCGCGTGATAGCCCAGAAACTGCTGGAGCTCCTCTTTGACTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS CCA 72 bp | GCAACAGGCGCAGCACCGCAGGTCGGCGCTCCAGGATaGTTGCCAGAGCCCTCAGGGCCCCTATCAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ATGAAPQVGAPG*LPEPSGPLSGC Trigger: GCAACCTGATAGGGGCCCTGAGGGCTCTGGCAACCATCCTGGAGCGCCGACCTGCGGTGCTGCGCCTGTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS CAA 90 bp | CCAGGAGCAACAGGCGCAGCACCGCAGGTCGGCGCTCCAGGATGGTaGCCAGAGCCCTCAGGGCCCCTATCAGGTTGCTATCGCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PGATGAAPQVGAPGW*PEPSGPLSGCYRQD Trigger: GTCCTGGCGATAGCAACCTGATAGGGGCCCTGAGGGCTCTGGCAACCATCCTGGAGCGCCGACCTGCGGTGCTGCGCCTGTTGCTCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS CAA 72 bp | ACAGGCGCAGCACCGCAGGTCGGCGCTCCAGGATGGTaGCCAGAGCCCTCAGGGCCCCTATCAGGTTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: TGAAPQVGAPGW*PEPSGPLSGCY Trigger: ATAGCAACCTGATAGGGGCCCTGAGGGCTCTGGCAACCATCCTGGAGCGCCGACCTGCGGTGCTGCGCCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS CAA 90 bp | CGGCGCTCCAGGATGGTTGCCAGAGCCCTCAGGGCCCCTATCAGGTaGCTATCGCCAGGACCACTGTCAAAGATGGTGCCCACCACATGC | + |
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Preference number: 6 (lower is better) Translates to: RRSRMVARALRAPIR*LSPGPLSKMVPTTC Trigger: GCATGTGGTGGGCACCATCTTTGACAGTGGTCCTGGCGATAGCAACCTGATAGGGGCCCTGAGGGCTCTGGCAACCATCCTGGAGCGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS GCA 72 bp | TCGCCAGGACCACTGTCAAAGATGGTGCCCACCACATaGAAATGGCGGAAGCGCTGGTGGGTCTGTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SPGPLSKMVPTT*KWRKRWWVCRS Trigger: GCTCCTACAGACCCACCAGCGCTTCCGCCATTTGCATGTGGTGGGCACCATCTTTGACAGTGGTCCTGGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS GCA 72 bp | GGATGGTTGCCAGAGCCCTCAGGGCCCCTATCAGGTTaGTATCGCCAGGACCACTGTCAAAGATGGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GWLPEPSGPLSG*YRQDHCQRWCP Trigger: TGGGCACCATCTTTGACAGTGGTCCTGGCGATAGCAACCTGATAGGGGCCCTGAGGGCTCTGGCAACCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS CCA 72 bp | GGACCACTGTCAAAGATGGTGCCCACCACATGCAAATaGCGGAAGCGCTGGTGGGTCTGTAGGAGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPLSKMVPTTCK*RKRWWVCRSSS Trigger: GCTGGAGCTCCTACAGACCCACCAGCGCTTCCGCCATTTGCATGTGGTGGGCACCATCTTTGACAGTGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS CAA 72 bp | AGGATGGTTGCCAGAGCCCTCAGGGCCCCTATCAGGTaGCTATCGCCAGGACCACTGTCAAAGATGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RMVARALRAPIR*LSPGPLSKMVP Trigger: GGGCACCATCTTTGACAGTGGTCCTGGCGATAGCAACCTGATAGGGGCCCTGAGGGCTCTGGCAACCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS GCA 72 bp | GAAGGGATGCCCAAGGACTCAGAGAAGAAGACCATGTaGCAGGGGGCCGTGTATCGGATCACAATGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: EGMPKDSEKKTM*QGAVYRITMQP Trigger: GGGCTGCATTGTGATCCGATACACGGCCCCCTGGCACATGGTCTTCTTCTCTGAGTCCTTGGGCATCCCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS GCA 72 bp | TCAGGTTGCTATCGCCAGGACCACTGTCAAAGATGGTaGCCACCACATGCAAATGGCGGAAGCGCTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SGCYRQDHCQRW*PPHANGGSAGG Trigger: CCCACCAGCGCTTCCGCCATTTGCATGTGGTGGGCACCATCTTTGACAGTGGTCCTGGCGATAGCAACCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS TCA 72 bp | GATGACACAAAGTCCACTCCACGCACCATGACCTGGTaGGCCAGGCGTGCCTCTACCATACGTTCCACATCC | + |
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Preference number: 6 (lower is better) Translates to: DDTKSTPRTMTW*ARRASTIRSTS Trigger: GGATGTGGAACGTATGGTAGAGGCACGCCTGGCTCACCAGGTCATGGTGCGTGGAGTGGACTTTGTGTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS TCA 72 bp | CATGCGCAGATGACACAAAGTCCACTCCACGCACCATaGCCTGGTGAGCCAGGCGTGCCTCTACCATACGTT | + |
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Preference number: 6 (lower is better) Translates to: HAQMTQSPLHAP*PGEPGVPLPYV Trigger: AACGTATGGTAGAGGCACGCCTGGCTCACCAGGTCATGGTGCGTGGAGTGGACTTTGTGTCATCTGCGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS TCA 72 bp | GTGTGGAAGAGGGCAGTGAATGGAGCAAGCAGGAAGTaGAACAGGATCACCACCAGGGCAAATGCTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VWKRAVNGASRK*NRITTRANAAR Trigger: CCTGGCAGCATTTGCCCTGGTGGTGATCCTGTTTCACTTCCTGCTTGCTCCATTCACTGCCCTCTTCCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS TCA 72 bp | AGTAGGATAGTCTCGGAGGTGGCTGACATGCGCAGATaGCACAAAGTCCACTCCACGCACCATGACCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SRIVSEVADMRR*HKVHSTHHDLV Trigger: CACCAGGTCATGGTGCGTGGAGTGGACTTTGTGTCATCTGCGCATGTCAGCCACCTCCGAGACTATCCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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| CDS TCA 72 bp | GAGGAGCTCCAGCAGTTTCTGGGCTATCACGCGAAGTaGAGGGATGCCCAAGGACTCAGAGAAGAAGACCAT | + |
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Preference number: 6 (lower is better) Translates to: EELQQFLGYHAK*RDAQGLREEDH Trigger: ATGGTCTTCTTCTCTGAGTCCTTGGGCATCCCTTCACTTCGCGTGATAGCCCAGAAACTGCTGGAGCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062824.12 ENSMUST00000106433.2 ENSMUST00000106434.8 ENSMUST00000125943.8 |
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