Pregenerated sensors for TMEM52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023153Ensembl transcript IDs: ENSMUST00000023920.3, ENSMUST00000178188.8, ENSMUST00000178238.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGCAATGTaGTGGATGGCTGGCCTTCCCAGGGGAAGGATGACACAGGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: AGQALHSNEAASAAM*WMAGLPRGRMTQVG Trigger: CCCCACCTGTGTCATCCTTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR CCA 90 bp | GGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGCAATGTGCTaGATGGCTGGCCTTCCCAGGGGAAGGATGACACAGGTGGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GQALHSNEAASAAMC*MAGLPRGRMTQVGL Trigger: GAGCCCCACCTGTGTCATCCTTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR GCA 90 bp | CTTCCCAGGGGAAGGATGACACAGGTGGGGCTCCTTGGTCCTAAGTaGCAGGAATCCAGGCAATGGTTTAATGGCTCCAGAAGAGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: LPRGRMTQVGLLGPK*QESRQWFNGSRREN Trigger: GTTCTCTCTTCTGGAGCCATTAAACCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGTCATCCTTCCCCTGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGATGGGAAGGGTGAATACAGGGGCAGGCTaGCTGGCCAGGCATTGCATA | + |
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Preference number: 2 (lower is better) Translates to: SRLLRDEGLLGPGWMGRVNTGAG*LARHCI Trigger: TATGCAATGCCTGGCCAGCCAGCCTGCCCCTGTATT...CACCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCCTGCTGGGCCCCGGATGGATGGGAAGGGTGAAGAAGAGGGGCCAATACTCCGCAGCAATGTGCTaGATGGCTGGCCTTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: EGLLGPGWMGRVKKRGQYSAAMC*MAGLPR Trigger: CCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGA...GTATTGGCCCCTCTTCTTCACCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGGCATGCCAGTGGGGTTTGAGCTCCCAAGATCCAGGCTCCTCCGGGATTCCGCAGCAATGTGCTaGATGGCTGGCCTTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RAGMPVGFELPRSRLLRDSAAMC*MAGLPR Trigger: CCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGA...ATCCCGGAGGAGCCTGGATCTTGGGAGCTCAAACCCCACTGGCATGCCAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCCTCAAAGGGCTGGCATGCCAGTGGGGTTTGAGCTCCCAAGATCCAGGCGCGTCCGCAGCAATGTaGTGGATGGCTGGCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: FPLKGLACQWGLSSQDPGASAAM*WMAGLP Trigger: GGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGC...GCCTGGATCTTGGGAGCTCAAACCCCACTGGCATGCCAGCCCTTTGAGGGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATGGGAAGGGTGAAGAAGAGGGGCCAATACAGGGGCAGGCTGGCTGGCCAGCAGCAATGTGCTGGATaGCTGGCCTTCCCAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: WMGRVKKRGQYRGRLAGQQQCAG*LAFPGE Trigger: TTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTG...CTGGCCAGCCAGCCTGCCCCTGTATTGGCCCCTCTTCTTCACCCTTCCCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGGCATGCCAGTGGGGTTTGAGCTCCCAAGATCCAGGCTCCTCCGGGATCAGCAATGTGCTGGATaGCTGGCCTTCCCAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RAGMPVGFELPRSRLLRDQQCAG*LAFPGE Trigger: TTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTG...ATCCCGGAGGAGCCTGGATCTTGGGAGCTCAAACCCCACTGGCATGCCAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR CCA 72 bp | CAACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTaGCCTTCCCAGGGGAAGGATGACACAGGTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: QRGRVRSNVLDG*PSQGKDDTGGA Trigger: AGCCCCACCTGTGTCATCCTTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR CCA 72 bp | AGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATaGATGGGAAGGGTGAAGAAGAGGGGCCAATACAGG | + |
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Preference number: 3 (lower is better) Translates to: RLLRDEGLLGPG*MGRVKKRGQYR Trigger: CCTGTATTGGCCCCTCTTCTTCACCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGGGGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGCACAGGTGGGGCTCCTaGGTCCTAAGTGCCAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: TGAGWLARHCIATRPRPQHRWGS*VLSARN Trigger: ATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTG...CTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCCCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR TCA 72 bp | CAATGTGCTGGATGGCTGGCCTTCCCAGGGGAAGGATaGCACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: QCAGWLAFPGEG*HRWGSLVLSAR Trigger: CCTGGCACTTAGGACCAAGGAGCCCCACCTGTGTCATCCTTCCCCTGGGAAGGCCAGCCATCCAGCACATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR GCA 72 bp | GCATTGCATAGCAACGAGGCCGCGTCCGCAGCAATGTaGTGGATGGCTGGCCTTCCCAGGGGAAGGATGACA | + |
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Preference number: 3 (lower is better) Translates to: ALHSNEAASAAM*WMAGLPRGRMT Trigger: TGTCATCCTTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGCTATGCAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR CCA 72 bp | TTGCATAGCAACGAGGCCGCGTCCGCAGCAATGTGCTaGATGGCTGGCCTTCCCAGGGGAAGGATGACACAG | + |
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Preference number: 3 (lower is better) Translates to: LHSNEAASAAMC*MAGLPRGRMTQ Trigger: CTGTGTCATCCTTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGCTATGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR CCA 72 bp | AAACTTTATTTTCCCCTCAAAGGGCTGGCATGCCAGTaGGGTTTGAGCTCCCAAGATCCAGGCTCCTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: KLYFPLKGLACQ*GLSSQDPGSSG Trigger: CCCGGAGGAGCCTGGATCTTGGGAGCTCAAACCCCACTGGCATGCCAGCCCTTTGAGGGGAAAATAAAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| 3UTR CCA 72 bp | GGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATaGTTTAATGGCTCCAGAAGAGAGAACTCCCACCCT | + |
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Preference number: 3 (lower is better) Translates to: GLLGPKCQESRQ*FNGSRRENSHP Trigger: AGGGTGGGAGTTCTCTCTTCTGGAGCCATTAAACCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | CTCCCAAGATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGATGCTGGGCACTGGGGCCTaGCTCCTGGGGCCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LPRSRLLRDEGLLGPGWMLGTGA*LLGPSS Trigger: ACTGGAGGGCCCCAGGAGCCAGGCCCCAGTGCCCAG...CATCCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATCTTGGGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGCTGGGGCCTGGCTCCTaGGGCCCTCCAGTGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TGAGWLARHCIATRPRPQLGPGS*GPPVVS Trigger: AGAGACCACTGGAGGGCCCCAGGAGCCAGGCCCCAG...CTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCCCCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | GGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGCAATGCCACATGCCATAGGCTaGTCCAGCGGGCCTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GRLAGQALHSNEAASAAMPHAIG*SSGPGA Trigger: CGCCCCAGGCCCGCTGGAGCAGCCTATGGCATGTGG...CATTGCTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023920.3 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | GAGCTCCCAAGATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGCCCTCCAGTGGTCTCTaGCTCCAAGGCCTCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ELPRSRLLRDEGLLGPGWPSSGL*LQGLRQ Trigger: CTGCCTGAGGCCTTGGAGCCAGAGACCACTGGAGGG...CCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATCTTGGGAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | GATGAGGGCCTGCTGGGCCCCGGATGGATGGGAAGGGTGAAGAAGAGGGGCCAACTGGGCACTGGGGCCTaGCTCCTGGGGCCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: DEGLLGPGWMGRVKKRGQLGTGA*LLGPSS Trigger: ACTGGAGGGCCCCAGGAGCCAGGCCCCAGTGCCCAG...TTGGCCCCTCTTCTTCACCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | ATAGCAACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTGGCCTTCCCAGGGCTGGGCACTGGGGCCTaGCTCCTGGGGCCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: IATRPRPQQCAGWLAFPGLGTGA*LLGPSS Trigger: ACTGGAGGGCCCCAGGAGCCAGGCCCCAGTGCCCAG...CCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGCTAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | GATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGATGGGAAGGGAGGATGAGCCCCACATaGCATAGGCTGCTCCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: DPGSSGMRACWAPDGWEGRMSPT*HRLLQR Trigger: CCGCTGGAGCAGCCTATGGCATGTGGGGCTCATCCT...CCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023920.3 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | GGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGCAATGACAGGGGCAGCCGCATaGCCAGTGGGTACTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: GRLAGQALHSNEAASAAMTGAAA*PVGTAR Trigger: CCGTGCAGTACCCACTGGGCATGCGGCTGCCCCTGT...CATTGCTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | ACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTGGCCTTCCCAGGGGAAGGAACAGGGGCAGCCGCATaGCCAGTGGGTACTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: TRPRPQQCAGWLAFPGEGTGAAA*PVGTAR Trigger: CCGTGCAGTACCCACTGGGCATGCGGCTGCCCCTGT...TCCTTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | AGCTCCCAAGATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGAGAACCCAGCGTCACCTaGGACAGAGGCAGGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SSQDPGSSGMRACWAPDGEPSVT*DRGRRG Trigger: GCCTCTCCTGCCTCTGTCCCAGGTGACGCTGGGTTC...TCCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATCTTGGGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | GAGGGCCTGCTGGGCCCCGGATGGATGGGAAGGGTGAAGAAGAGGGGCCAATACCTGGGGCCTGGCTCCTaGGGCCCTCCAGTGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: EGLLGPGWMGRVKKRGQYLGPGS*GPPVVS Trigger: AGAGACCACTGGAGGGCCCCAGGAGCCAGGCCCCAG...GTATTGGCCCCTCTTCTTCACCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | AAAGGGCTGGCATGCCAGTGGGGTTTGAGCTCCCAAGATCCAGGCTCCTCCGGGCCACATGCCATAGGCTaGTCCAGCGGGCCTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: KGLACQWGLSSQDPGSSGPHAIG*SSGPGA Trigger: CGCCCCAGGCCCGCTGGAGCAGCCTATGGCATGTGG...CCCGGAGGAGCCTGGATCTTGGGAGCTCAAACCCCACTGGCATGCCAGCCCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023920.3 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | GAGCTCCCAAGATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGGTGTGTGACTGGGTGTaGGTCTGCTTCCTGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ELPRSRLLRDEGLLGPGWVCDWV*VCFLRQ Trigger: CTGCCTCAGGAAGCAGACGCACACCCAGTCACACAC...CCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATCTTGGGAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | GATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGATGGGAAGGGGGTCACAGTGCTGTGTaGGGGGCTATCACTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: DPGSSGMRACWAPDGWEGGHSAV*GAITVH Trigger: GTGGACAGTGATAGCCCCGCACACAGCACTGTGACC...CCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | GATGAGGGCCTGCTGGGCCCCGGATGGATGGGAAGGGTGAAGAAGAGGGGCCAAACAGGGGCAGCCGCATaGCCAGTGGGTACTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: DEGLLGPGWMGRVKKRGQTGAAA*PVGTAR Trigger: CCGTGCAGTACCCACTGGGCATGCGGCTGCCCCTGT...TTGGCCCCTCTTCTTCACCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGCAATGGAACCCAGCGTCACCTaGGACAGAGGCAGGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: GRLAGQALHSNEAASAAMEPSVT*DRGRRG Trigger: GCCTCTCCTGCCTCTGTCCCAGGTGACGCTGGGTTC...CATTGCTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGCTGGCATGCCAGTGGGGTTTGAGCTCCCAAGATCCAGGCTCCTCCGGGCTGGGGCCTGGCTCCTaGGGCCCTCCAGTGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KGLACQWGLSSQDPGSSGLGPGS*GPPVVS Trigger: AGAGACCACTGGAGGGCCCCAGGAGCCAGGCCCCAG...CCCGGAGGAGCCTGGATCTTGGGAGCTCAAACCCCACTGGCATGCCAGCCCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGGTGTGTGACTGGGTGTaGGTCTGCTTCCTGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TGAGWLARHCIATRPRPQVCDWV*VCFLRQ Trigger: CTGCCTCAGGAAGCAGACGCACACCCAGTCACACAC...CTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCCCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | AATACAGGGGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGGAACCCAGCGTCACCTaGGACAGAGGCAGGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: NTGAGWLARHCIATRPRPEPSVT*DRGRRG Trigger: GCCTCTCCTGCCTCTGTCCCAGGTGACGCTGGGTTC...CGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCCCCTGTATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | GAGCTCCCAAGATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGCATGGAGTCAGGGTCTaGCTCTCCAAAGTACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: ELPRSRLLRDEGLLGPGWHGVRV*LSKVQG Trigger: CCCCTGTACTTTGGAGAGCCAGACCCTGACTCCATG...CCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATCTTGGGAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR TCA 90 bp | AGCTCCCAAGATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGATGTGCGTCTGCTTCCTaGGGCAGCAGAATCGTACAC | + |
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Preference number: 4 (lower is better) Translates to: SSQDPGSSGMRACWAPDGCASAS*GSRIVH Trigger: GTGTACGATTCTGCTGCCTCAGGAAGCAGACGCACA...TCCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATCTTGGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGTGTAGGAGGTCACAGTaGTGTGTGCGGGGCTATCAC | + |
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Preference number: 4 (lower is better) Translates to: TGAGWLARHCIATRPRPQCRRSQ*CVRGYH Trigger: GTGATAGCCCCGCACACAGCACTGTGACCTCCTACA...CTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCCCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | AGCTCCCAAGATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGACATAGAGGCTGTAGGTaGGAGGGACCATGGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SSQDPGSSGMRACWAPDGHRGCR*EGPWSQ Trigger: CTGACTCCATGGTCCCTCCCACCTACAGCCTCTATG...TCCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATCTTGGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | GAGGGCCTGCTGGGCCCCGGATGGATGGGAAGGGTGAAGAAGAGGGGCCAATACGGTCACAGTGCTGTGTaGGGGGCTATCACTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EGLLGPGWMGRVKKRGQYGHSAV*GAITVH Trigger: GTGGACAGTGATAGCCCCGCACACAGCACTGTGACC...GTATTGGCCCCTCTTCTTCACCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGTTTCTCAGAGGGAGCTaGCACTTCCTCCCTGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TGAGWLARHCIATRPRPQFLRGS*HFLPGF Trigger: AAAGCCAGGGAGGAAGTGGCAGCTCCCTCTGAGAAA...CTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCCCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | ATAGCAACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTGGCCTTCCCAGGGCAGCCGCATGCCCAGTaGGTACTGCACGGAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IATRPRPQQCAGWLAFPGQPHAQ*VLHGTV Trigger: TACAGTTCCGTGCAGTACCCACTGGGCATGCGGCTG...CCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCAGCCTCAGGCAGAGAGTTaGTTTTCTCAGAGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGAGWLARHCIATRPRPQPQAES*FSQREL Trigger: CAGCTCCCTCTGAGAAAACCAACTCTCTGCCTGAGG...CTGCGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCCCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR TCA 90 bp | ATAGCAACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTGGCCTTCCCAGGGTGTGCGTCTGCTTCCTaGGGCAGCAGAATCGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: IATRPRPQQCAGWLAFPGCASAS*GSRIVH Trigger: GTGTACGATTCTGCTGCCTCAGGAAGCAGACGCACA...CCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR TCA 90 bp | CATAGCAACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTGGCCTTCCCAGGTGTGCGTCTGCTTCCTaGGGCAGCAGAATCGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: HSNEAASAAMCWMAGLPRCASAS*GSRIVH Trigger: GTGTACGATTCTGCTGCCTCAGGAAGCAGACGCACA...CCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGCTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | ACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTGGCCTTCCCAGGGGAAGGATTTCTCAGAGGGAGCTaGCACTTCCTCCCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRPRPQQCAGWLAFPGEGFLRGS*HFLPGF Trigger: AAAGCCAGGGAGGAAGTGGCAGCTCCCTCTGAGAAA...TCCTTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | TGGATGGGAAGGGTGAAGAAGAGGGGCCAATACAGGGGCAGGCTGGCTGGCCAGTGTAGGAGGTCACAGTaGTGTGTGCGGGGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: WMGRVKKRGQYRGRLAGQCRRSQ*CVRGYH Trigger: GTGATAGCCCCGCACACAGCACTGTGACCTCCTACA...CTGGCCAGCCAGCCTGCCCCTGTATTGGCCCCTCTTCTTCACCCTTCCCATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | GAGCTCCCAAGATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGCTGCCACTTCCTCCCTaGCTTTTATCATCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ELPRSRLLRDEGLLGPGWLPLPP*LLSSSQ Trigger: TTGTGAAGATGATAAAAGCCAGGGAGGAAGTGGCAG...CCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATCTTGGGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | AATACAGGGGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGCCTCAGGCAGAGAGTTaGTTTTCTCAGAGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTGAGWLARHCIATRPRPPQAES*FSQREL Trigger: CAGCTCCCTCTGAGAAAACCAACTCTCTGCCTGAGG...CGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCCCCTGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS-3UTR CCA 90 bp | CATAGCAACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTGGCCTTCCCAGGCCTCAGGCAGAGAGTTaGTTTTCTCAGAGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSNEAASAAMCWMAGLPRPQAES*FSQREL Trigger: CAGCTCCCTCTGAGAAAACCAACTCTCTGCCTGAGG...CCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGCTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGACACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGCCCTCCAGTGGTCTCTaGCTCCAAGGCCTCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RMTQVGLLGPKCQESRQWPSSGL*LQGLRQ Trigger: CTGCCTGAGGCCTTGGAGCCAGAGACCACTGGAGGG...CCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGTCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGACACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGAGGTGGGAGGGACCATaGAGTCAGGGTCTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RMTQVGLLGPKCQESRQWRWEGP*SQGLAL Trigger: GAGAGCCAGACCCTGACTCCATGGTCCCTCCCACCT...CCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGTCATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGATGACACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAACAGCCGCATGCCCAGTaGGTACTGCACGGAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRMTQVGLLGPKCQESRQQPHAQ*VLHGTV Trigger: TACAGTTCCGTGCAGTACCCACTGGGCATGCGGCTG...TTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGTCATCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGTTTAATGGCAGGTGGGAGGGACCATaGAGTCAGGGTCTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVGLLGPKCQESRQWFNGRWEGP*SQGLAL Trigger: GAGAGCCAGACCCTGACTCCATGGTCCCTCCCACCT...GCCATTAAACCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS-3UTR CCA 90 bp | GCAACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTGGCCTTCCCAGGGGAACTGCCACTTCCTCCCTaGCTTTTATCATCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ATRPRPQQCAGWLAFPGELPLPP*LLSSSQ Trigger: TTGTGAAGATGATAAAAGCCAGGGAGGAAGTGGCAG...TTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | GGAAGGATGACACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAACATAGAGGCTGTAGGTaGGAGGGACCATGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRMTQVGLLGPKCQESRQHRGCR*EGPWSQ Trigger: CTGACTCCATGGTCCCTCCCACCTACAGCCTCTATG...TTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGTCATCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | CAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGTTTAATGGCTGTAGGAGGTCACAGTaGTGTGTGCGGGGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVGLLGPKCQESRQWFNGCRRSQ*CVRGYH Trigger: GTGATAGCCCCGCACACAGCACTGTGACCTCCTACA...GCCATTAAACCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | CAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGTTTAATGGCCATGGAGTCAGGGTCTaGCTCTCCAAAGTACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVGLLGPKCQESRQWFNGHGVRV*LSKVQG Trigger: CCCCTGTACTTTGGAGAGCCAGACCCTGACTCCATG...GCCATTAAACCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | ACACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGTTTAATAGGTGGGAGGGACCATaGAGTCAGGGTCTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQVGLLGPKCQESRQWFNRWEGP*SQGLAL Trigger: GAGAGCCAGACCCTGACTCCATGGTCCCTCCCACCT...ATTAAACCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR GCA 90 bp | ACACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGTTTAATGGTCACAGTGCTGTGTaGGGGGCTATCACTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQVGLLGPKCQESRQWFNGHSAV*GAITVH Trigger: GTGGACAGTGATAGCCCCGCACACAGCACTGTGACC...ATTAAACCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGTTTAATCATGGAGTCAGGGTCTaGCTCTCCAAAGTACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQVGLLGPKCQESRQWFNHGVRV*LSKVQG Trigger: CCCCTGTACTTTGGAGAGCCAGACCCTGACTCCATG...ATTAAACCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CCA 90 bp | CTAAGTGCCAGGAATCCAGGCAATGGTTTAATGGCTCCAGAAGAGAGAACTCCCCTGCCACTTCCTCCCTaGCTTTTATCATCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LSARNPGNGLMAPEERTPLPLPP*LLSSSQ Trigger: TTGTGAAGATGATAAAAGCCAGGGAGGAAGTGGCAG...GGGAGTTCTCTCTTCTGGAGCCATTAAACCATTGCCTGGATTCCTGGCACTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS GCA 90 bp | GCGGGCACCTGCGGGGACAGCGGCACTGATCCGAGGGGTCACAGTTaGGGTCCGCGGAACCCAGCGTCACCTGGGACAGAGGCAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGTCGDSGTDPRGHS*GPRNPASPGTEAGE Trigger: CTCTCCTGCCTCTGTCCCAGGTGACGCTGGGTTCCGCGGACCGCAACTGTGACCCCTCGGATCAGTGCCGCTGTCCCCGCAGGTGCCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178238.8 |
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| CDS-3UTR CAA 90 bp | GATCCAGGCTCCTCCGGGATGAGGGCCTGCTGGGCCCCGGATGGATGGGAAGGGTCCGAGGGGTCACAGTaGCGGTCCGCGGAACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DPGSSGMRACWAPDGWEGSEGSQ*RSAEPS Trigger: GCTGGGTTCCGCGGACCGCAACTGTGACCCCTCGGA...CCCTTCCCATCCATCCGGGGCCCAGCAGGCCCTCATCCCGGAGGAGCCTGGATC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CAA 90 bp | GCAACGAGGCCGCGTCCGCAGCAATGTGCTGGATGGCTGGCCTTCCCAGGGGAATCCGAGGGGTCACAGTaGCGGTCCGCGGAACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATRPRPQQCAGWLAFPGESEGSQ*RSAEPS Trigger: GCTGGGTTCCGCGGACCGCAACTGTGACCCCTCGGA...TTCCCCTGGGAAGGCCAGCCATCCAGCACATTGCTGCGGACGCGGCCTCGTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS TCA 90 bp | AGGAGGTCACAGTGCTGTGTGCGGGGCTATCACTGTCCACTGGGATaGCTGTCCCGTCACAGGGCTGCCACGCCGCTGGCGTGTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: RRSQCCVRGYHCPLG*LSRHRAATPLACVT Trigger: AGTCACACACGCCAGCGGCGTGGCAGCCCTGTGACGGGACAGTCATCCCAGTGGACAGTGATAGCCCCGCACACAGCACTGTGACCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS GCA 90 bp | TCACAGGGCTGCCACGCCGCTGGCGTGTGTGACTGGGTGTGCGTCTaGTTCCTGAGGCAGCAGAATCGTACACAGCTGGCTGTGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQGCHAAGVCDWVCV*FLRQQNRTQLAVTP Trigger: TGGGGTCACAGCCAGCTGTGTACGATTCTGCTGCCTCAGGAAGCAGACGCACACCCAGTCACACACGCCAGCGGCGTGGCAGCCCTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS CCA 90 bp | ACTGTAGGAGGTCACAGTGCTGTGTGCGGGGCTATCACTGTCCACTaGGATGACTGTCCCGTCACAGGGCTGCCACGCCGCTGGCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVGGHSAVCGAITVH*DDCPVTGLPRRWRV Trigger: CACACGCCAGCGGCGTGGCAGCCCTGTGACGGGACAGTCATCCCAGTGGACAGTGATAGCCCCGCACACAGCACTGTGACCTCCTACAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS TCA 90 bp | TGGGATGACTGTCCCGTCACAGGGCTGCCACGCCGCTGGCGTGTGTaGCTGGGTGTGCGTCTGCTTCCTGAGGCAGCAGAATCGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: WDDCPVTGLPRRWRV*LGVRLLPEAAESYT Trigger: TGTGTACGATTCTGCTGCCTCAGGAAGCAGACGCACACCCAGTCACACACGCCAGCGGCGTGGCAGCCCTGTGACGGGACAGTCATCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS CCA 90 bp | GTCAGGGTCTGGCTCTCCAAAGTACAGGGGCAGCCGCATGCCCAGTaGGTACTGCACGGAACTGTAGGAGGTCACAGTGCTGTGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VRVWLSKVQGQPHAQ*VLHGTVGGHSAVCG Trigger: CCCGCACACAGCACTGTGACCTCCTACAGTTCCGTGCAGTACCCACTGGGCATGCGGCTGCCCCTGTACTTTGGAGAGCCAGACCCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CAA 90 bp | AGGATGACACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGTCCGAGGGGTCACAGTaGCGGTCCGCGGAACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RMTQVGLLGPKCQESRQWSEGSQ*RSAEPS Trigger: GCTGGGTTCCGCGGACCGCAACTGTGACCCCTCGGA...CCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGTCATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS CCA 90 bp | AGACGCATAGAGGCTGTAGGTGGGAGGGACCATGGAGTCAGGGTCTaGCTCTCCAAAGTACAGGGGCAGCCGCATGCCCAGTGGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: RRIEAVGGRDHGVRV*LSKVQGQPHAQWVL Trigger: CAGTACCCACTGGGCATGCGGCTGCCCCTGTACTTTGGAGAGCCAGACCCTGACTCCATGGTCCCTCCCACCTACAGCCTCTATGCGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CAA 90 bp | AATACAGGGGCAGGCTGGCTGGCCAGGCATTGCATAGCAACGAGGCCGCGTCCGGCCTCAGGCAGAGAGTaGGTTTTCTCAGAGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NTGAGWLARHCIATRPRPASGRE*VFSEGA Trigger: AGCTCCCTCTGAGAAAACCAACTCTCTGCCTGAGGC...CGGACGCGGCCTCGTTGCTATGCAATGCCTGGCCAGCCAGCCTGCCCCTGTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS GCA 90 bp | CCATGGAGTCAGGGTCTGGCTCTCCAAAGTACAGGGGCAGCCGCATaGCCAGTGGGTACTGCACGGAACTGTAGGAGGTCACAGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PWSQGLALQSTGAAA*PVGTARNCRRSQCC Trigger: ACAGCACTGTGACCTCCTACAGTTCCGTGCAGTACCCACTGGGCATGCGGCTGCCCCTGTACTTTGGAGAGCCAGACCCTGACTCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS-3UTR CAA 90 bp | AGGATGACACAGGTGGGGCTCCTTGGTCCTAAGTGCCAGGAATCCAGGCAATGGGCCTCAGGCAGAGAGTaGGTTTTCTCAGAGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RMTQVGLLGPKCQESRQWASGRE*VFSEGA Trigger: AGCTCCCTCTGAGAAAACCAACTCTCTGCCTGAGGC...CCATTGCCTGGATTCCTGGCACTTAGGACCAAGGAGCCCCACCTGTGTCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS CCA 90 bp | TTCCTCCCTGGCTTTTATCATCTTCACAACTTCATCGTAGGAGGGTaGCAGCTCAGACGCATAGAGGCTGTAGGTGGGAGGGACCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLPGFYHLHNFIVGG*QLRRIEAVGGRDHG Trigger: TCCATGGTCCCTCCCACCTACAGCCTCTATGCGTCTGAGCTGCCACCCTCCTACGATGAAGTTGTGAAGATGATAAAAGCCAGGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS CCA 90 bp | CAGGCAGAGAGTTGGTTTTCTCAGAGGGAGCTGCCACTTCCTCCCTaGCTTTTATCATCTTCACAACTTCATCGTAGGAGGGTGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QAESWFSQRELPLPP*LLSSSQLHRRRVAA Trigger: AGCTGCCACCCTCCTACGATGAAGTTGTGAAGATGATAAAAGCCAGGGAGGAAGTGGCAGCTCCCTCTGAGAAAACCAACTCTCTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS GCA 72 bp | GGGCCTGGGGCGGGCACTGATCCGAGGGGTCACAGTTaGGGTCCGCGGAACCCAGCGTCACCTGGGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GPGAGTDPRGHS*GPRNPASPGTE Trigger: CTCTGTCCCAGGTGACGCTGGGTTCCGCGGACCGCAACTGTGACCCCTCGGATCAGTGCCCGCCCCAGGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023920.3 |
||
| CDS GCA 72 bp | TGCGGGGACAGCGGCACTGATCCGAGGGGTCACAGTTaGGGTCCGCGGAACCCAGCGTCACCTGGGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CGDSGTDPRGHS*GPRNPASPGTE Trigger: CTCTGTCCCAGGTGACGCTGGGTTCCGCGGACCGCAACTGTGACCCCTCGGATCAGTGCCGCTGTCCCCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178238.8 |
||
| CDS GCA 72 bp | AGCATCAGGAGTATGGCGAGCAGGATGAGCCCCACATaGCATAGGCTGCTCCAGCGGGCCTGGGGCGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SIRSMASRMSPT*HRLLQRAWGGH Trigger: GTGCCCGCCCCAGGCCCGCTGGAGCAGCCTATGGCATGTGGGGCTCATCCTGCTCGCCATACTCCTGATGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023920.3 ENSMUST00000178238.8 |
||
| CDS TCA 72 bp | TGTCCCGTCACAGGGCTGCCACGCCGCTGGCGTGTGTaGCTGGGTGTGCGTCTGCTTCCTGAGGCAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CPVTGLPRRWRV*LGVRLLPEAAE Trigger: TTCTGCTGCCTCAGGAAGCAGACGCACACCCAGTCACACACGCCAGCGGCGTGGCAGCCCTGTGACGGGACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS CCA 72 bp | GGTCACAGTGCTGTGTGCGGGGCTATCACTGTCCACTaGGATGACTGTCCCGTCACAGGGCTGCCACGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GHSAVCGAITVH*DDCPVTGLPRR Trigger: GCGGCGTGGCAGCCCTGTGACGGGACAGTCATCCCAGTGGACAGTGATAGCCCCGCACACAGCACTGTGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS GCA 72 bp | CAGGGCTGCCACGCCGCTGGCGTGTGTGACTGGGTGTaGGTCTGCTTCCTGAGGCAGCAGAATCGTACACAG | + |
|
Preference number: 6 (lower is better) Translates to: QGCHAAGVCDWV*VCFLRQQNRTQ Trigger: CTGTGTACGATTCTGCTGCCTCAGGAAGCAGACGCACACCCAGTCACACACGCCAGCGGCGTGGCAGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
||
| CDS CCA 72 bp | GAGGCTGTAGGTGGGAGGGACCATGGAGTCAGGGTCTaGCTCTCCAAAGTACAGGGGCAGCCGCATGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EAVGGRDHGVRV*LSKVQGQPHAQ Trigger: CTGGGCATGCGGCTGCCCCTGTACTTTGGAGAGCCAGACCCTGACTCCATGGTCCCTCCCACCTACAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS GCA 72 bp | TGCCACGCCGCTGGCGTGTGTGACTGGGTGTGCGTCTaGTTCCTGAGGCAGCAGAATCGTACACAGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CHAAGVCDWVCV*FLRQQNRTQLA Trigger: AGCCAGCTGTGTACGATTCTGCTGCCTCAGGAAGCAGACGCACACCCAGTCACACACGCCAGCGGCGTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS GCA 72 bp | CAGGGTCTGGCTCTCCAAAGTACAGGGGCAGCCGCATaGCCAGTGGGTACTGCACGGAACTGTAGGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QGLALQSTGAAA*PVGTARNCRRS Trigger: TGACCTCCTACAGTTCCGTGCAGTACCCACTGGGCATGCGGCTGCCCCTGTACTTTGGAGAGCCAGACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS TCA 72 bp | CACAAAAGCATCAGGAGTATGGCGAGCAGGATGAGCTaGTCCGAGGGGTCACAGTTGCGGTCCGCGGAACCC | + |
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Preference number: 6 (lower is better) Translates to: HKSIRSMASRMS*SEGSQLRSAEP Trigger: GGGTTCCGCGGACCGCAACTGTGACCCCTCGGATCAGCTCATCCTGCTCGCCATACTCCTGATGCTTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178188.8 |
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| CDS CCA 72 bp | TGGCTCTCCAAAGTACAGGGGCAGCCGCATGCCCAGTaGGTACTGCACGGAACTGTAGGAGGTCACAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: WLSKVQGQPHAQ*VLHGTVGGHSA Trigger: AGCACTGTGACCTCCTACAGTTCCGTGCAGTACCCACTGGGCATGCGGCTGCCCCTGTACTTTGGAGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS CCA 72 bp | CAGTGGTCTCTGGCTCCAAGGCCTCAGGCAGAGAGTTaGTTTTCTCAGAGGGAGCTGCCACTTCCTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QWSLAPRPQAES*FSQRELPLPPW Trigger: CCAGGGAGGAAGTGGCAGCTCCCTCTGAGAAAACCAACTCTCTGCCTGAGGCCTTGGAGCCAGAGACCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS GCA 72 bp | GTACTGCACGGAACTGTAGGAGGTCACAGTGCTGTGTaGGGGGCTATCACTGTCCACTGGGATGACTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VLHGTVGGHSAV*GAITVHWDDCP Trigger: GGGACAGTCATCCCAGTGGACAGTGATAGCCCCGCACACAGCACTGTGACCTCCTACAGTTCCGTGCAGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS GCA 72 bp | GGCCTCAGGCAGAGAGTTGGTTTTCTCAGAGGGAGCTaGCACTTCCTCCCTGGCTTTTATCATCTTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: GLRQRVGFLRGS*HFLPGFYHLHN Trigger: GTTGTGAAGATGATAAAAGCCAGGGAGGAAGTGGCAGCTCCCTCTGAGAAAACCAACTCTCTGCCTGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS CCA 72 bp | GGCTTTTATCATCTTCACAACTTCATCGTAGGAGGGTaGCAGCTCAGACGCATAGAGGCTGTAGGTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GFYHLHNFIVGG*QLRRIEAVGGR Trigger: CCTCCCACCTACAGCCTCTATGCGTCTGAGCTGCCACCCTCCTACGATGAAGTTGTGAAGATGATAAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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| CDS CCA 72 bp | AGTTGGTTTTCTCAGAGGGAGCTGCCACTTCCTCCCTaGCTTTTATCATCTTCACAACTTCATCGTAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SWFSQRELPLPP*LLSSSQLHRRR Trigger: CCTCCTACGATGAAGTTGTGAAGATGATAAAAGCCAGGGAGGAAGTGGCAGCTCCCTCTGAGAAAACCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023920.3 ENSMUST00000178188.8 ENSMUST00000178238.8 |
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