Pregenerated sensors for TMEM51 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040616Ensembl transcript IDs: ENSMUST00000036572.4
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTGCATGGCGTTTGAGAAGGCATGGAGCAGCGACTTCCTCTCTTaGCTTTCGTTACCCACAGGAAACCAGTGTACCGAACCGGACAAT | + |
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Preference number: 1 (lower is better) Translates to: NCMAFEKAWSSDFLS*LSLPTGNQCTEPDN Trigger: ATTGTCCGGTTCGGTACACTGGTTTCCTGTGGGTAACGAAAGGCAAGAGAGGAAGTCGCTGCTCCATGCCTTCTCAAACGCCATGCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR CCA 90 bp | GACAATTCCAGGTCCTTTTGGCCAAGGCAGAACCACGTTCTCCACTaGTTCAAGGCTCCAGTGAAGAAAGCAAGCACAAAACACGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: DNSRSFWPRQNHVLH*FKAPVKKASTKHGF Trigger: GAAACCGTGTTTTGTGCTTGCTTTCTTCACTGGAGCCTTGAACCAGTGGAGAACGTGGTTCTGCCTTGGCCAAAAGGACCTGGAATTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTCGCACGCTGAAGGTCATCAGGCCTTAGACCTTCAAAGAACCAGCAGCACTCTCTGCGGGGCTCTGTaGACCGTTCTCTCCCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: VSHAEGHQALDLQRTSSTLCGAL*TVLSLY Trigger: GTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAG...AGTGCTGCTGGTTCTTTGAAGGTCTAAGGCCTGATGACCTTCAGCGTGCGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR-3UTR TCA 90 bp | ATGGCGTTTGAGAAGGCATGGAGCAGCGACTTCCTCTCTTGCCTTTCGTTACCCGGGGTGTGTGGGCAATaGTCCCAAGTGGGAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MAFEKAWSSDFLSCLSLPGVCGQ*SQVGEK Trigger: TTTCTCTCCCACTTGGGATCATTGCCCACACACCCC...GGGTAACGAAAGGCAAGAGAGGAAGTCGCTGCTCCATGCCTTCTCAAACGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTGCTATGGTTCAGAGCATCATAAACTCCCAGCATCCTTCTGATGCCCCTCGACTGGGGCTGAAGTaGCTTTGGCGAAGTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: PLAMVQSIINSQHPSDAPRLGLK*LWRSLL Trigger: CAACAGACTTCGCCAAAGCCACTTCAGCCCCAGTCG...AGGGGCATCAGAAGGATGCTGGGAGTTTATGATGCTCTGAACCATAGCAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGAAGAAAGCAAGCACAAAACACGGTTTCTTTTTGAAACGCAGCAACTGTCGAAGTCTGTTGGTGTaGAGGGTGAGACAGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PVKKASTKHGFFLKRSNCRSLLV*RVRQEG Trigger: TCCCTCCTGTCTCACCCTCCACACCAACAGACTTCG...ACAGTTGCTGCGTTTCAAAAAGAAACCGTGTTTTGTGCTTGCTTTCTTCACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR GCA 72 bp | GGTGTGTGGGCAATGATCCCAAGTGGGAGAGAAAGATaGCGGGGATGCCAAGGCCACACCCCTTGCTATGGT | + |
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Preference number: 3 (lower is better) Translates to: GVWAMIPSGRER*RGCQGHTPCYG Trigger: ACCATAGCAAGGGGTGTGGCCTTGGCATCCCCGGCATCTTTCTCTCCCACTTGGGATCATTGCCCACACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR GCA 72 bp | GCGTTTGAGAAGGCATGGAGCAGCGACTTCCTCTCTTaGCTTTCGTTACCCACAGGAAACCAGTGTACCGAA | + |
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Preference number: 3 (lower is better) Translates to: AFEKAWSSDFLS*LSLPTGNQCTE Trigger: TTCGGTACACTGGTTTCCTGTGGGTAACGAAAGGCAAGAGAGGAAGTCGCTGCTCCATGCCTTCTCAAACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR CCA 72 bp | AGGTCCTTTTGGCCAAGGCAGAACCACGTTCTCCACTaGTTCAAGGCTCCAGTGAAGAAAGCAAGCACAAAA | + |
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Preference number: 3 (lower is better) Translates to: RSFWPRQNHVLH*FKAPVKKASTK Trigger: TTTTGTGCTTGCTTTCTTCACTGGAGCCTTGAACCAGTGGAGAACGTGGTTCTGCCTTGGCCAAAAGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR CCA 72 bp | TATAAAATGCCCAACTGCATGGCGTTTGAGAAGGCATaGAGCAGCGACTTCCTCTCTTGCCTTTCGTTACCC | + |
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Preference number: 3 (lower is better) Translates to: YKMPNCMAFEKA*SSDFLSCLSLP Trigger: GGGTAACGAAAGGCAAGAGAGGAAGTCGCTGCTCCATGCCTTCTCAAACGCCATGCAGTTGGGCATTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR CCA 72 bp | CATATAAAACACTTTATTATAAAATGCCCAACTGCATaGCGTTTGAGAAGGCATGGAGCAGCGACTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: HIKHFIIKCPTA*RLRRHGAATSS Trigger: AGAGGAAGTCGCTGCTCCATGCCTTCTCAAACGCCATGCAGTTGGGCATTTTATAATAAAGTGTTTTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CCA 90 bp | ACTCTGCGGGGCTCTGTGAACCGTTCTCTCCCTCTACCCACAATCCCCATCACACCGCCCTGGTGCTGGTaGGGGTTGCCTCGTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TLRGSVNRSLPLPTIPITPPWCW*GLPRPA Trigger: GGCTGGACGAGGCAACCCCCACCAGCACCAGGGCGG...TGTGATGGGGATTGTGGGTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR GCA 90 bp | CCTACTCTGCGGGGCTCTGTGAACCGTTCTCTCCCTCTACCCACAATCCCCATCGCAGCAGCAGCATCATaGCAGCCCCGACCAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: PTLRGSVNRSLPLPTIPIAAAAS*QPRPAR Trigger: ACGTGCTGGTCGGGGCTGGCATGATGCTGCTGCTGC...GATGGGGATTGTGGGTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAGTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR GCA 90 bp | CCCTACTCTGCGGGGCTCTGTGAACCGTTCTCTCCCTCTACCCACAATCCCCATTGCCTGTCCGGAGCATaGCCTGGGCTGGTCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PYSAGLCEPFSPSTHNPHCLSGA*PGLVSV Trigger: GACAGAGACCAGCCCAGGGCATGCTCCGGACAGGCA...ATGGGGATTGTGGGTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAGTAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CCA 90 bp | CCTACTCTGCGGGGCTCTGTGAACCGTTCTCTCCCTCTACCCACAATCCCCATCGGCGTTTGGCCAGCTTaGAGTTTTGCCTGTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PTLRGSVNRSLPLPTIPIGVWPA*SFACPE Trigger: CTCCGGACAGGCAAAACTCCAAGCTGGCCAAACGCC...GATGGGGATTGTGGGTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR TCA 90 bp | CCTACTCTGCGGGGCTCTGTGAACCGTTCTCTCCCTCTACCCACAATCCCCATCCGGTACGTAGTACCGTaGGGAGACATCCTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PTLRGSVNRSLPLPTIPIRYVVP*GDILLF Trigger: GAAGAGGAGGATGTCTCCTCACGGTACTACGTACCG...GATGGGGATTGTGGGTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAGTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR GCA 90 bp | ACTCTGCGGGGCTCTGTGAACCGTTCTCTCCCTCTACCCACAATCCCCATCACACTCAGTCTTGGGTTCTaGTCCTGCCCCCTGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: TLRGSVNRSLPLPTIPITLSLGF*SCPLVS Trigger: GGAAACCAGGGGGCAGGAGCAGAACCCAAGACTGAG...TGTGATGGGGATTGTGGGTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR TCA 90 bp | CCTACTCTGCGGGGCTCTGTGAACCGTTCTCTCCCTCTACCCACAATCCCCATCTCTGTCTTGTTGCCCTaGGACGTTGGCTTATCCGCA | + |
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Preference number: 4 (lower is better) Translates to: PTLRGSVNRSLPLPTIPISVLLP*DVGLSA Trigger: TGCGGATAAGCCAACGTCTCAGGGCAACAAGACAGA...GATGGGGATTGTGGGTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CCA 90 bp | CCCTACTCTGCGGGGCTCTGTGAACCGTTCTCTCCCTCTACCCACAATCCCCATAGAAATGCTCAGTCTTaGGTTCTGCTCCTGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PYSAGLCEPFSPSTHNPHRNAQS*VLLLPP Trigger: AGGGGGCAGGAGCAGAACCCAAGACTGAGCATTTCT...ATGGGGATTGTGGGTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAGTAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CCA 90 bp | TTCACAAGACAATTCCAGGTCCTTTTGGCCAAGGCAGAACCACGTTCTCCACTGGCATCCCCAGGCCGATaGCCGTCAGTGCGTAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: FTRQFQVLLAKAEPRSPLASPGR*PSVRSV Trigger: CACACTACGCACTGACGGCCATCGGCCTGGGGATGC...CAGTGGAGAACGTGGTTCTGCCTTGGCCAAAAGGACCTGGAATTGTCTTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CCA 90 bp | TTCACAAGACAATTCCAGGTCCTTTTGGCCAAGGCAGAACCACGTTCTCCACTGTCTCTGTCTCCGCCCTaGTGCTGGTGGGGGTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: FTRQFQVLLAKAEPRSPLSLSPP*CWWGLP Trigger: AGGCAACCCCCACCAGCACCAGGGCGGAGACAGAGA...CAGTGGAGAACGTGGTTCTGCCTTGGCCAAAAGGACCTGGAATTGTCTTGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR TCA 90 bp | CCCCTTGCTATGGTTCAGAGCATCATAAACTCCCAGCATCCTTCTGATGCCCCTGTTCCTGCCTGCTGCTaGATTCGAGCCAGCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PLAMVQSIINSQHPSDAPVPACC*IRASSS Trigger: TGAGGAGCTGGCTCGAATTCAGCAGCAGGCAGGAAC...AGGGGCATCAGAAGGATGCTGGGAGTTTATGATGCTCTGAACCATAGCAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR TCA 90 bp | ATGGCGTTTGAGAAGGCATGGAGCAGCGACTTCCTCTCTTGCCTTTCGTTACCCAAAACGTCTTGCTCTTaGGGATGCCACCACCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: MAFEKAWSSDFLSCLSLPKTSCS*GCHHLP Trigger: AGGGAGGTGGTGGCATCCTCAAGAGCAAGACGTTTT...GGGTAACGAAAGGCAAGAGAGGAAGTCGCTGCTCCATGCCTTCTCAAACGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR GCA 90 bp | AGCATCATAAACTCCCAGCATCCTTCTGATGCCCCTACTCTGCGGGGCTCTGTGAGGAGGGGAGAGAAATaGTCAGTCTTGGGTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SIINSQHPSDAPTLRGSVRRGEK*SVLGSA Trigger: AGCAGAACCCAAGACTGAGCATTTCTCTCCCCTCCT...CACAGAGCCCCGCAGAGTAGGGGCATCAGAAGGATGCTGGGAGTTTATGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CCA 90 bp | AAGGCTCCAGTGAAGAAAGCAAGCACAAAACACGGTTTCTTTTTGAAACGCAGCGTCCGGAGCATGCCCTaGGCTGGTCTCTGTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: KAPVKKASTKHGFFLKRSVRSMP*AGLCLR Trigger: GCGGAGACAGAGACCAGCCCAGGGCATGCTCCGGAC...GCTGCGTTTCAAAAAGAAACCGTGTTTTGTGCTTGCTTTCTTCACTGGAGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CCA 90 bp | AAGGCTCCAGTGAAGAAAGCAAGCACAAAACACGGTTTCTTTTTGAAACGCAGCTCTGCTCCTGCCCCCTaGTTTCCGGGTAGCCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: KAPVKKASTKHGFFLKRSSAPAP*FPGSPC Trigger: ACACGGGCTACCCGGAAACCAGGGGGCAGGAGCAGA...GCTGCGTTTCAAAAAGAAACCGTGTTTTGTGCTTGCTTTCTTCACTGGAGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR GCA 90 bp | AAGGCTCCAGTGAAGAAAGCAAGCACAAAACACGGTTTCTTTTTGAAACGCAGCGCCAGCTCCTCACTCTaGCGCATCCTCCTTTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: KAPVKKASTKHGFFLKRSASSSL*RILLLS Trigger: GGACAAAAGGAGGATGCGGCAGAGTGAGGAGCTGGC...GCTGCGTTTCAAAAAGAAACCGTGTTTTGTGCTTGCTTTCTTCACTGGAGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR TCA 90 bp | AAGGCTCCAGTGAAGAAAGCAAGCACAAAACACGGTTTCTTTTTGAAACGCAGCCAGCACGTACGCCACTaGAAACGTCTTGCTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: KAPVKKASTKHGFFLKRSQHVRH*KRLALE Trigger: CTCAAGAGCAAGACGTTTTCAGTGGCGTACGTGCTG...GCTGCGTTTCAAAAAGAAACCGTGTTTTGTGCTTGCTTTCTTCACTGGAGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CCA 90 bp | AAGGCTCCAGTGAAGAAAGCAAGCACAAAACACGGTTTCTTTTTGAAACGCAGCCCTTCGAACTTTGAGTaGCTTCAGGCGTTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KAPVKKASTKHGFFLKRSPSNFE*LQAFGQ Trigger: CTGGCCAAACGCCTGAAGCCACTCAAAGTTCGAAGG...GCTGCGTTTCAAAAAGAAACCGTGTTTTGTGCTTGCTTTCTTCACTGGAGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR TCA 90 bp | TTCACAAGACAATTCCAGGTCCTTTTGGCCAAGGCAGAACCACGTTCTCCACTGCTGAAGTCTTTGAGGTaGAGCTTTTCGGATTTAATC | + |
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Preference number: 4 (lower is better) Translates to: FTRQFQVLLAKAEPRSPLLKSLR*SFSDLI Trigger: GATTAAATCCGAAAAGCTTCACCTCAAAGACTTCAG...CAGTGGAGAACGTGGTTCTGCCTTGGCCAAAAGGACCTGGAATTGTCTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| 3UTR CAA 72 bp | AAACACTTTATTATAAAATGCCCAACTGCATGGCGTTaGAGAAGGCATGGAGCAGCGACTTCCTCTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: KHFIIKCPTAWR*RRHGAATSSLA Trigger: GGCAAGAGAGGAAGTCGCTGCTCCATGCCTTCTCAAACGCCATGCAGTTGGGCATTTTATAATAAAGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS GCA 90 bp | GCCTGTCCGGAGCATGCCCTGGGCTGGTCTCTGTCTCCGCCCTGGTaGTGGTGGGGGTTGCCTCGTCCAGCCCCGTTAGCGACTCATAGG | + |
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Preference number: 5 (lower is better) Translates to: ACPEHALGWSLSPPW*WWGLPRPAPLATHR Trigger: CCTATGAGTCGCTAACGGGGCTGGACGAGGCAACCCCCACCAGCACCAGGGCGGAGACAGAGACCAGCCCAGGGCATGCTCCGGACAGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CCA 90 bp | TGTCCGGAGCATGCCCTGGGCTGGTCTCTGTCTCCGCCCTGGTGCTaGTGGGGGTTGCCTCGTCCAGCCCCGTTAGCGACTCATAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: CPEHALGWSLSPPWC*WGLPRPAPLATHRR Trigger: CCTCCTATGAGTCGCTAACGGGGCTGGACGAGGCAACCCCCACCAGCACCAGGGCGGAGACAGAGACCAGCCCAGGGCATGCTCCGGACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CCA 90 bp | TTTGCCTGTCCGGAGCATGCCCTGGGCTGGTCTCTGTCTCCGCCCTaGTGCTGGTGGGGGTTGCCTCGTCCAGCCCCGTTAGCGACTCAT | + |
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Preference number: 5 (lower is better) Translates to: FACPEHALGWSLSPP*CWWGLPRPAPLATH Trigger: ATGAGTCGCTAACGGGGCTGGACGAGGCAACCCCCACCAGCACCAGGGCGGAGACAGAGACCAGCCCAGGGCATGCTCCGGACAGGCAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS GCA 90 bp | CTTCGAACTTTGAGTGGCTTCAGGCGTTTGGCCAGCTTGGAGTTTTaGCTGTCCGGAGCATGCCCTGGGCTGGTCTCTGTCTCCGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: LRTLSGFRRLASLEF*LSGACPGLVSVSAL Trigger: CAGGGCGGAGACAGAGACCAGCCCAGGGCATGCTCCGGACAGGCAAAACTCCAAGCTGGCCAAACGCCTGAAGCCACTCAAAGTTCGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS TCA 90 bp | TGCCAGCCCCGACCAGCACGTACGCCACTGAAAACGTCTTGCTCTTaGGGATGCCACCACCTCCCTCTGTCTTGTTGCCCTGAGACGTTG | + |
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Preference number: 5 (lower is better) Translates to: CQPRPARTPLKTSCS*GCHHLPLSCCPETL Trigger: CAACGTCTCAGGGCAACAAGACAGAGGGAGGTGGTGGCATCCTCAAGAGCAAGACGTTTTCAGTGGCGTACGTGCTGGTCGGGGCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CAA 90 bp | GAAGTGGCTTTGGCGAAGTCTGTTGGTGTGGAGGGTGAGACAGGAGGGAGTGTACTGGCTGTCTTCTTCTaGGGAGTGGGGCACGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: EVALAKSVGVEGETGGSVLAVFF*GVGHGS Trigger: GGAACCGTGCCCCACTCCCAAGAAGAAGACAGCCAG...TACACTCCCTCCTGTCTCACCCTCCACACCAACAGACTTCGCCAAAGCCACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CAA 90 bp | CCCCTTGCTATGGTTCAGAGCATCATAAACTCCCAGCATCCTTCTGATGCCCCTTGGTGCTGGTGGGGGTaGCCTCGTCCAGCCCCGTTA | + |
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Preference number: 5 (lower is better) Translates to: PLAMVQSIINSQHPSDAPWCWWG*PRPAPL Trigger: TAACGGGGCTGGACGAGGCAACCCCCACCAGCACCA...AGGGGCATCAGAAGGATGCTGGGAGTTTATGATGCTCTGAACCATAGCAAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CAA 90 bp | CCTACTCTGCGGGGCTCTGTGAACCGTTCTCTCCCTCTACCCACAATCCCCATCGCCACTGAAAACGTCTaGCTCTTGAGGATGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: PTLRGSVNRSLPLPTIPIATENV*LLRMPP Trigger: TGGTGGCATCCTCAAGAGCAAGACGTTTTCAGTGGC...GATGGGGATTGTGGGTAGAGGGAGAGAACGGTTCACAGAGCCCCGCAGAGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CAA 90 bp | GAAGTGGCTTTGGCGAAGTCTGTTGGTGTGGAGGGTGAGACAGGAGGGAGTGTAAGGCGTTTGGCCAGCTaGGAGTTTTGCCTGTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: EVALAKSVGVEGETGGSVRRLAS*EFCLSG Trigger: TCCGGACAGGCAAAACTCCAAGCTGGCCAAACGCCT...TACACTCCCTCCTGTCTCACCCTCCACACCAACAGACTTCGCCAAAGCCACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CAA 90 bp | TTCACAAGACAATTCCAGGTCCTTTTGGCCAAGGCAGAACCACGTTCTCCACTGTGCCGCATCCTCCTTTaGTCCCGGATGCTCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: FTRQFQVLLAKAEPRSPLCRILL*SRMLRQ Trigger: CTGCCTGAGCATCCGGGACAAAAGGAGGATGCGGCA...CAGTGGAGAACGTGGTTCTGCCTTGGCCAAAAGGACCTGGAATTGTCTTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CAA 90 bp | CCCCTTGCTATGGTTCAGAGCATCATAAACTCCCAGCATCCTTCTGATGCCCCTGAGAAATGCTCAGTCTaGGGTTCTGCTCCTGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: PLAMVQSIINSQHPSDAPEKCSV*GSAPAP Trigger: GGGGGCAGGAGCAGAACCCAAGACTGAGCATTTCTC...AGGGGCATCAGAAGGATGCTGGGAGTTTATGATGCTCTGAACCATAGCAAGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS-3UTR CAA 90 bp | AGCATCATAAACTCCCAGCATCCTTCTGATGCCCCTACTCTGCGGGGCTCTGTGTTAATCCTTCGAACTTaGAGTGGCTTCAGGCGTTTG | + |
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Preference number: 5 (lower is better) Translates to: SIINSQHPSDAPTLRGSVLILRT*SGFRRL Trigger: CAAACGCCTGAAGCCACTCAAAGTTCGAAGGATTAA...CACAGAGCCCCGCAGAGTAGGGGCATCAGAAGGATGCTGGGAGTTTATGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CCA 90 bp | GTCTTTGAGGTGAAGCTTTTCGGATTTAATCCTTCGAACTTTGAGTaGCTTCAGGCGTTTGGCCAGCTTGGAGTTTTGCCTGTCCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: VFEVKLFGFNPSNFE*LQAFGQLGVLPVRS Trigger: GCTCCGGACAGGCAAAACTCCAAGCTGGCCAAACGCCTGAAGCCACTCAAAGTTCGAAGGATTAAATCCGAAAAGCTTCACCTCAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS TCA 90 bp | GGAGGAACGTTCTTGTCCGGTAGGGTGATCCTGAAGTCTTTGAGGTaGAGCTTTTCGGATTTAATCCTTCGAACTTTGAGTGGCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: GGTFLSGRVILKSLR*SFSDLILRTLSGFR Trigger: CCTGAAGCCACTCAAAGTTCGAAGGATTAAATCCGAAAAGCTTCACCTCAAAGACTTCAGGATCACCCTACCGGACAAGAACGTTCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS GCA 72 bp | GAGCATGCCCTGGGCTGGTCTCTGTCTCCGCCCTGGTaGTGGTGGGGGTTGCCTCGTCCAGCCCCGTTAGCG | + |
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Preference number: 6 (lower is better) Translates to: EHALGWSLSPPW*WWGLPRPAPLA Trigger: CGCTAACGGGGCTGGACGAGGCAACCCCCACCAGCACCAGGGCGGAGACAGAGACCAGCCCAGGGCATGCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CCA 72 bp | CATGCCCTGGGCTGGTCTCTGTCTCCGCCCTGGTGCTaGTGGGGGTTGCCTCGTCCAGCCCCGTTAGCGACT | + |
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Preference number: 6 (lower is better) Translates to: HALGWSLSPPWC*WGLPRPAPLAT Trigger: AGTCGCTAACGGGGCTGGACGAGGCAACCCCCACCAGCACCAGGGCGGAGACAGAGACCAGCCCAGGGCATG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CCA 72 bp | GGCCAGCTTGGAGTTTTGCCTGTCCGGAGCATGCCCTaGGCTGGTCTCTGTCTCCGCCCTGGTGCTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GQLGVLPVRSMP*AGLCLRPGAGG Trigger: CCCACCAGCACCAGGGCGGAGACAGAGACCAGCCCAGGGCATGCTCCGGACAGGCAAAACTCCAAGCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS GCA 72 bp | CGTTTGGCCAGCTTGGAGTTTTGCCTGTCCGGAGCATaGCCTGGGCTGGTCTCTGTCTCCGCCCTGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RLASLEFCLSGA*PGLVSVSALVL Trigger: CAGCACCAGGGCGGAGACAGAGACCAGCCCAGGGCATGCTCCGGACAGGCAAAACTCCAAGCTGGCCAAACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS TCA 72 bp | TCTTCTTGGGAGTGGGGCACGGTTCCTGCCTGCTGCTaGATTCGAGCCAGCTCCTCACTCTGCCGCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSWEWGTVPACC*IRASSSLCRIL Trigger: GAGGATGCGGCAGAGTGAGGAGCTGGCTCGAATTCAGCAGCAGGCAGGAACCGTGCCCCACTCCCAAGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CAA 90 bp | CCTTCGAACTTTGAGTGGCTTCAGGCGTTTGGCCAGCTTGGAGTTTaGCCTGTCCGGAGCATGCCCTGGGCTGGTCTCTGTCTCCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: PSNFEWLQAFGQLGV*PVRSMPWAGLCLRP Trigger: AGGGCGGAGACAGAGACCAGCCCAGGGCATGCTCCGGACAGGCAAAACTCCAAGCTGGCCAAACGCCTGAAGCCACTCAAAGTTCGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS TCA 72 bp | CAGCATCATGCCAGCCCCGACCAGCACGTACGCCACTaGAAACGTCTTGCTCTTGAGGATGCCACCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: QHHASPDQHVRH*KRLALEDATTS Trigger: GGAGGTGGTGGCATCCTCAAGAGCAAGACGTTTTCAGTGGCGTACGTGCTGGTCGGGGCTGGCATGATGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CAA 72 bp | CTTCGAACTTTGAGTGGCTTCAGGCGTTTGGCCAGCTaGGAGTTTTGCCTGTCCGGAGCATGCCCTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRTLSGFRRLAS*EFCLSGACPGL Trigger: CAGCCCAGGGCATGCTCCGGACAGGCAAAACTCCAAGCTGGCCAAACGCCTGAAGCCACTCAAAGTTCGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS TCA 72 bp | CGACCAGCACGTACGCCACTGAAAACGTCTTGCTCTTaGGGATGCCACCACCTCCCTCTGTCTTGTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RPARTPLKTSCS*GCHHLPLSCCP Trigger: AGGGCAACAAGACAGAGGGAGGTGGTGGCATCCTCAAGAGCAAGACGTTTTCAGTGGCGTACGTGCTGGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CCA 72 bp | GAGAAATGCTCAGTCTTGGGTTCTGCTCCTGCCCCCTaGTTTCCGGGTAGCCCGTGTTCATCACTTCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: EKCSVLGSAPAP*FPGSPCSSLPR Trigger: ACGAGGAAGTGATGAACACGGGCTACCCGGAAACCAGGGGGCAGGAGCAGAACCCAAGACTGAGCATTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CAA 72 bp | TTAGCGACTCATAGGAGGGGAGAGAAATGCTCAGTCTaGGGTTCTGCTCCTGCCCCCTGGTTTCCGGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LATHRRGEKCSV*GSAPAPWFPGS Trigger: GCTACCCGGAAACCAGGGGGCAGGAGCAGAACCCAAGACTGAGCATTTCTCTCCCCTCCTATGAGTCGCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CAA 90 bp | GATTTAATCCTTCGAACTTTGAGTGGCTTCAGGCGTTTGGCCAGCTaGGAGTTTTGCCTGTCCGGAGCATGCCCTGGGCTGGTCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: DLILRTLSGFRRLAS*EFCLSGACPGLVSV Trigger: GACAGAGACCAGCCCAGGGCATGCTCCGGACAGGCAAAACTCCAAGCTGGCCAAACGCCTGAAGCCACTCAAAGTTCGAAGGATTAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS CCA 72 bp | GTGAAGCTTTTCGGATTTAATCCTTCGAACTTTGAGTaGCTTCAGGCGTTTGGCCAGCTTGGAGTTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VKLFGFNPSNFE*LQAFGQLGVLP Trigger: AGGCAAAACTCCAAGCTGGCCAAACGCCTGAAGCCACTCAAAGTTCGAAGGATTAAATCCGAAAAGCTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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| CDS TCA 72 bp | TTCTTGTCCGGTAGGGTGATCCTGAAGTCTTTGAGGTaGAGCTTTTCGGATTTAATCCTTCGAACTTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: FLSGRVILKSLR*SFSDLILRTLS Trigger: ACTCAAAGTTCGAAGGATTAAATCCGAAAAGCTTCACCTCAAAGACTTCAGGATCACCCTACCGGACAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036572.4 |
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