Pregenerated sensors for TMEM50B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022964Ensembl transcript IDs: ENSMUST00000023686.15, ENSMUST00000133180.8, ENSMUST00000141885.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCGCCCAGAGCCTGAGAGCTACACAGAAGGAGTCAGAACAAACTaGGTGAAGCAGCTGGCCTTTTGTAGGTCACAGCGCCCTTCGGGA | + |
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Preference number: 1 (lower is better) Translates to: GRPEPESYTEGVRTN*VKQLAFCRSQRPSG Trigger: TCCCGAAGGGCGCTGTGACCTACAAAAGGCCAGCTGCTTCACTCAGTTTGTTCTGACTCCTTCTGTGTAGCTCTCAGGCTCTGGGCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR GCA 90 bp | GGCAAGCGCAGCGCTCAAACATGGGAAGGAGGGTCTGGTGTGGAGTaGGAACTTTCAGTACAGGATACCTGTACTCTGCAGCAGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: GKRSAQTWEGGSGVE*ELSVQDTCTLQQLG Trigger: GCCCAGCTGCTGCAGAGTACAGGTATCCTGTACTGAAAGTTCGCACTCCACACCAGACCCTCCTTCCCATGTTTGAGCGCTGCGCTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 90 bp | CTTGGGGCAAGCGCAGCGCTCAAACATGGGAAGGAGGGTCTGGTGTaGAGTGCGAACTTTCAGTACAGGATACCTGTACTCTGCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LGASAALKHGKEGLV*SANFQYRIPVLCSS Trigger: GCTGCTGCAGAGTACAGGTATCCTGTACTGAAAGTTCGCACTCCACACCAGACCCTCCTTCCCATGTTTGAGCGCTGCGCTTGCCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR TCA 90 bp | GCCCAGAGCCTGAGAGCTACACAGAAGGAGTCAGAACAAACTGAGTaGAGCAGCTGGCCTTTTGTAGGTCACAGCGCCCTTCGGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: AQSLRATQKESEQTE*SSWPFVGHSALREE Trigger: CTCTTCCCGAAGGGCGCTGTGACCTACAAAAGGCCAGCTGCTTCACTCAGTTTGTTCTGACTCCTTCTGTGTAGCTCTCAGGCTCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR TCA 90 bp | CAGTACAGGATACCTGTACTCTGCAGCAGCTGGGCGCCCAGAGCCTaGGAGCTACACAGAAGGAGTCAGAACAAACTGAGTGAAGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: QYRIPVLCSSWAPRA*ELHRRSQNKLSEAA Trigger: AGCTGCTTCACTCAGTTTGTTCTGACTCCTTCTGTGTAGCTCTCAGGCTCTGGGCGCCCAGCTGCTGCAGAGTACAGGTATCCTGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 90 bp | GCATTTATCATGAAGAAGGCCAGCGTGGAAAACACACCGCACGTGTaGAAAGCGTGGTTCAGCTGCTCAGGCTTAGGGTACACCACTGCC | + |
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Preference number: 1 (lower is better) Translates to: AFIMKKASVENTPHV*KAWFSCSGLGYTTA Trigger: GGCAGTGGTGTACCCTAAGCCTGAGCAGCTGAACCACGCTTTCCACACGTGCGGTGTGTTTTCCACGCTGGCCTTCTTCATGATAAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141885.2 |
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| 3UTR CCA 90 bp | ATATACTTGGGGCAAGCGCAGCGCTCAAACATGGGAAGGAGGGTCTaGTGTGGAGTGCGAACTTTCAGTACAGGATACCTGTACTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: IYLGQAQRSNMGRRV*CGVRTFSTGYLYSA Trigger: TGCAGAGTACAGGTATCCTGTACTGAAAGTTCGCACTCCACACCAGACCCTCCTTCCCATGTTTGAGCGCTGCGCTTGCCCCAAGTATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 90 bp | CAACACAAAATCTTGACTCAAGGGAAAGGCCCACAGAAATATACTTaGGGCAAGCGCAGCGCTCAAACATGGGAAGGAGGGTCTGGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: QHKILTQGKGPQKYT*GKRSAQTWEGGSGV Trigger: CACACCAGACCCTCCTTCCCATGTTTGAGCGCTGCGCTTGCCCCAAGTATATTTCTGTGGGCCTTTCCCTTGAGTCAAGATTTTGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR TCA 90 bp | TGCCTAGTCGATGAAAAACCAAGACAAACTCAGGGCACAAAACTATaGAGAAATGAAGCCCTGAGCACACAACGCTCCATTTGGCAATCT | + |
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Preference number: 1 (lower is better) Translates to: CLVDEKPRQTQGTKL*RNEALSTQRSIWQS Trigger: AGATTGCCAAATGGAGCGTTGTGTGCTCAGGGCTTCATTTCTTCATAGTTTTGTGCCCTGAGTTTGTCTTGGTTTTTCATCGACTAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023686.15 ENSMUST00000133180.8 |
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| 3UTR GCA 90 bp | TTCGTTAATGGCTCAGGGCCTCTAGGGACACGGAGCTGTGTATTTTaGACATTTTCAAACATCAGAGATACCAAGACAAAGTATTTACCT | + |
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Preference number: 1 (lower is better) Translates to: FVNGSGPLGTRSCVF*TFSNIRDTKTKYLP Trigger: AGGTAAATACTTTGTCTTGGTATCTCTGATGTTTGAAAATGTGCAAAATACACAGCTCCGTGTCCCTAGAGGCCCTGAGCCATTAACGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR GCA 90 bp | CGAACTTTCAGTACAGGATACCTGTACTCTGCAGCAGCTGGGCGCCCAGAGCCTTGCTGCAGGGTCCCTTaGTGTGTGTTAATGCCGGAC | + |
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Preference number: 2 (lower is better) Translates to: RTFSTGYLYSAAAGRPEPCCRVP*CVLMPD Trigger: GTCCGGCATTAACACACAGCAAGGGACCCTGCAGCA...AGGCTCTGGGCGCCCAGCTGCTGCAGAGTACAGGTATCCTGTACTGAAAGTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR TCA 90 bp | CGAACTTTCAGTACAGGATACCTGTACTCTGCAGCAGCTGGGCGCCCAGAGCCTCAGGGCACAAAACTATaGAGAAATGAAGCCCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: RTFSTGYLYSAAAGRPEPQGTKL*RNEALS Trigger: GCTCAGGGCTTCATTTCTTCATAGTTTTGTGCCCTG...AGGCTCTGGGCGCCCAGCTGCTGCAGAGTACAGGTATCCTGTACTGAAAGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CAA 90 bp | GCAACACAAAATCTTGACTCAAGGGAAAGGCCCACAGAAATATACTaGGGGCAAGCGCAGCGCTCAAACATGGGAAGGAGGGTCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: ATQNLDSRERPTEIY*GQAQRSNMGRRVWC Trigger: ACACCAGACCCTCCTTCCCATGTTTGAGCGCTGCGCTTGCCCCAAGTATATTTCTGTGGGCCTTTCCCTTGAGTCAAGATTTTGTGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTCTTGGACAGTGGAGGATGCAGAGCAAGGTTGTACGGGTCACTTCCCCCCAGCTGCCTGCCGTCTaGTTTACAAAATGGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LFLGQWRMQSKVVRVTSPQLPAV*FTKWSV Trigger: AACACTCCATTTTGTAAATCAGACGGCAGGCAGCTG...GGGGGAAGTGACCCGTACAACCTTGCTCTGCATCCTCCACTGTCCAAGAAACAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR TCA 90 bp | ACATGGGAAGGAGGGTCTGGTGTGGAGTGCGAACTTTCAGTACAGGATACCTGTGGAGTCAGAACAAACTaGGTGAAGCAGCTGGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TWEGGSGVECELSVQDTCGVRTN*VKQLAF Trigger: AAAGGCCAGCTGCTTCACTCAGTTTGTTCTGACTCC...ACAGGTATCCTGTACTGAAAGTTCGCACTCCACACCAGACCCTCCTTCCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR TCA 90 bp | ACATGGGAAGGAGGGTCTGGTGTGGAGTGCGAACTTTCAGTACAGGATACCTGTGAAGAAATGAAGCCCTaGGCACACAACGCTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: TWEGGSGVECELSVQDTCEEMKP*AHNAPF Trigger: AAATGGAGCGTTGTGTGCTCAGGGCTTCATTTCTTC...ACAGGTATCCTGTACTGAAAGTTCGCACTCCACACCAGACCCTCCTTCCCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTCTTGGACAGTGGAGGATGCAGAGCAAGGTTGTACGGGTCACTTCCCCCTCAGAACAAACTGAGTaGAGCAGCTGGCCTTTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LFLGQWRMQSKVVRVTSPSEQTE*SSWPFV Trigger: TACAAAAGGCCAGCTGCTTCACTCAGTTTGTTCTGA...GGGGGAAGTGACCCGTACAACCTTGCTCTGCATCCTCCACTGTCCAAGAAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGCCTCTAGGGACACGGAGCTGTGTATTTTGCACATTTTCAAACATCAGATACAAGAGGAAGGGGTaGTGTGCGGTGATCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SGPLGTRSCVFCTFSNIRYKRKG*CAVISG Trigger: GCCTGAGATCACCGCACACCACCCCTTCCTCTTGTA...TCTGATGTTTGAAAATGTGCAAAATACACAGCTCCGTGTCCCTAGAGGCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133180.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGAGGGTCTGGTGTGGAGTGCGAACTTTCAGTACAGGATACCTGTACTCACACAACGCTCCATTTaGCAATCTGTAACGTCATAT | + |
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Preference number: 2 (lower is better) Translates to: GKEGLVWSANFQYRIPVLTQRSI*QSVTSY Trigger: ATATGACGTTACAGATTGCCAAATGGAGCGTTGTGT...GAGTACAGGTATCCTGTACTGAAAGTTCGCACTCCACACCAGACCCTCCTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTCTAGGGACACGGAGCTGTGTATTTTGCACATTTTCAAACATCAGAGATGAAGAAATGAAGCCCTaGGCACACAACGCTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: GPLGTRSCVFCTFSNIRDEEMKP*AHNAPF Trigger: AAATGGAGCGTTGTGTGCTCAGGGCTTCATTTCTTC...ATCTCTGATGTTTGAAAATGTGCAAAATACACAGCTCCGTGTCCCTAGAGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023686.15 ENSMUST00000133180.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTGCTTCCATCCTTACTACTGGTTTACAGCAAATTGTCTTATAAAAATCCTATCCAAGCTGCTCGGTaGGACGGGAAGCACAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: ALLPSLLLVYSKLSYKNPIQAAR*DGKHRA Trigger: AGCTCTGTGCTTCCCGTCTCACCGAGCAGCTTGGAT...AGGATTTTTATAAGACAATTTGCTGTAAACCAGTAGTAAGGATGGAAGCAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTCTAGGGACACGGAGCTGTGTATTTTGCACATTTTCAAACATCAGAGATAAAACTATGAAGAAATaGAGCCCTGAGCACACAACG | + |
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Preference number: 2 (lower is better) Translates to: GPLGTRSCVFCTFSNIRDKTMKK*SPEHTT Trigger: CGTTGTGTGCTCAGGGCTTCATTTCTTCATAGTTTT...ATCTCTGATGTTTGAAAATGTGCAAAATACACAGCTCCGTGTCCCTAGAGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023686.15 ENSMUST00000133180.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCTCTAGGGACACGGAGCTGTGTATTTTGCACATTTTCAAACATCAGAGAACACAACGCTCCATTTaGCAATCTGTAACGTCATAT | + |
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Preference number: 2 (lower is better) Translates to: RASRDTELCILHIFKHQRTQRSI*QSVTSY Trigger: ATATGACGTTACAGATTGCCAAATGGAGCGTTGTGT...TCTCTGATGTTTGAAAATGTGCAAAATACACAGCTCCGTGTCCCTAGAGGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023686.15 ENSMUST00000133180.8 |
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| 3UTR CAA 90 bp | ATGGGAGGTGCACTGCTTCCATCCTTACTACTGGTTTACAGCAAATaGTCTTATAAAAATCCTCTCGGGTTGAAAGTGCAACACAAAATC | + |
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Preference number: 2 (lower is better) Translates to: MGGALLPSLLLVYSK*SYKNPLGLKVQHKI Trigger: GATTTTGTGTTGCACTTTCAACCCGAGAGGATTTTTATAAGACAATTTGCTGTAAACCAGTAGTAAGGATGGAAGCAGTGCACCTCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR GCA 90 bp | GCACTGCTTCCATCCTTACTACTGGTTTACAGCAAATTGTCTTATAAAAATCCTCAGAGCTCAGCTGCCTaGCGTCTGATTTACAAAATG | + |
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Preference number: 2 (lower is better) Translates to: ALLPSLLLVYSKLSYKNPQSSAA*RLIYKM Trigger: CATTTTGTAAATCAGACGGCAGGCAGCTGAGCTCTG...AGGATTTTTATAAGACAATTTGCTGTAAACCAGTAGTAAGGATGGAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR TCA 90 bp | ATATTAGCTTGCCTAGTCGATGAAAAACCAAGACAAACTCAGGGCACAAAACTAAAAACTATGAAGAAATaGAGCCCTGAGCACACAACG | + |
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Preference number: 2 (lower is better) Translates to: ILACLVDEKPRQTQGTKLKTMKK*SPEHTT Trigger: CGTTGTGTGCTCAGGGCTTCATTTCTTCATAGTTTT...TAGTTTTGTGCCCTGAGTTTGTCTTGGTTTTTCATCGACTAGGCAAGCTAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023686.15 ENSMUST00000133180.8 |
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| 3UTR GCA 72 bp | GCCATGCATCTAAACTGCGGCTGCTGCAGGGTCCCTTaGTGTGTGTTAATGCCGGACGGAGGCAGGCCATCC | + |
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Preference number: 3 (lower is better) Translates to: AMHLNCGCCRVP*CVLMPDGGRPS Trigger: GGATGGCCTGCCTCCGTCCGGCATTAACACACAGCAAGGGACCCTGCAGCAGCCGCAGTTTAGATGCATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 72 bp | AGCGCAGCGATCAGCAGACGCTTCACGCGCTGTGCTTaGAGGGGCCTCTCAGAGAGGCCGCTAAGTAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: SAAISRRFTRCA*RGLSERPLSKV Trigger: CACTTTACTTAGCGGCCTCTCTGAGAGGCCCCTCCAAGCACAGCGCGTGAAGCGTCTGCTGATCGCTGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 72 bp | ATAACGGAGCTCGCCATGGAATACAAGAGGAAGGGGTaGTGTGCGGTGATCTCAGGCCCAGAGCTCTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: ITELAMEYKRKG*CAVISGPELFS Trigger: ACTGAAGAGCTCTGGGCCTGAGATCACCGCACACCACCCCTTCCTCTTGTATTCCATGGCGAGCTCCGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133180.8 |
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| 3UTR GCA 72 bp | AGTGTGTCCTCTCCTTGTTTCTTGGACAGTGGAGGATaGAGAGCAAGGTTGTACGGGTCACTTCCCCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SVSSPCFLDSGG*RARLYGSLPPA Trigger: TGCTGGGGGAAGTGACCCGTACAACCTTGCTCTGCATCCTCCACTGTCCAAGAAACAAGGAGAGGACACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 72 bp | AGCGCAGCGCTCAAACATGGGAAGGAGGGTCTGGTGTaGAGTGCGAACTTTCAGTACAGGATACCTGTACTC | + |
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Preference number: 3 (lower is better) Translates to: SAALKHGKEGLV*SANFQYRIPVL Trigger: GAGTACAGGTATCCTGTACTGAAAGTTCGCACTCCACACCAGACCCTCCTTCCCATGTTTGAGCGCTGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR TCA 72 bp | GAGCCTGAGAGCTACACAGAAGGAGTCAGAACAAACTaGGTGAAGCAGCTGGCCTTTTGTAGGTCACAGCGC | + |
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Preference number: 3 (lower is better) Translates to: EPESYTEGVRTN*VKQLAFCRSQR Trigger: GCGCTGTGACCTACAAAAGGCCAGCTGCTTCACTCAGTTTGTTCTGACTCCTTCTGTGTAGCTCTCAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 72 bp | CAGAAATATACTTGGGGCAAGCGCAGCGCTCAAACATaGGAAGGAGGGTCTGGTGTGGAGTGCGAACTTTCA | + |
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Preference number: 3 (lower is better) Translates to: QKYTWGKRSAQT*EGGSGVECELS Trigger: TGAAAGTTCGCACTCCACACCAGACCCTCCTTCCCATGTTTGAGCGCTGCGCTTGCCCCAAGTATATTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 72 bp | ATCTTGACTCAAGGGAAAGGCCCACAGAAATATACTTaGGGCAAGCGCAGCGCTCAAACATGGGAAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: ILTQGKGPQKYT*GKRSAQTWEGG Trigger: CCCTCCTTCCCATGTTTGAGCGCTGCGCTTGCCCCAAGTATATTTCTGTGGGCCTTTCCCTTGAGTCAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR CAA 90 bp | AACGGAGCTCGCCATGGAATACAAGAGGAAGGGGTGGTGTGCGGTGATCTCAGGCACACAACGCTCCATTaGGCAATCTGTAACGTCATA | + |
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Preference number: 3 (lower is better) Translates to: NGARHGIQEEGVVCGDLRHTTLH*AICNVI Trigger: TATGACGTTACAGATTGCCAAATGGAGCGTTGTGTG...CCTGAGATCACCGCACACCACCCCTTCCTCTTGTATTCCATGGCGAGCTCCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133180.8 |
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| 3UTR TCA 72 bp | CTGAGAGCTACACAGAAGGAGTCAGAACAAACTGAGTaGAGCAGCTGGCCTTTTGTAGGTCACAGCGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: LRATQKESEQTE*SSWPFVGHSAL Trigger: AAGGGCGCTGTGACCTACAAAAGGCCAGCTGCTTCACTCAGTTTGTTCTGACTCCTTCTGTGTAGCTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 72 bp | TGTGTACAGTGTGTCCTCTCCTTGTTTCTTGGACAGTaGAGGATGCAGAGCAAGGTTGTACGGGTCACTTCC | + |
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Preference number: 3 (lower is better) Translates to: CVQCVLSLFLGQ*RMQSKVVRVTS Trigger: GGAAGTGACCCGTACAACCTTGCTCTGCATCCTCCACTGTCCAAGAAACAAGGAGAGGACACACTGTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR CAA 90 bp | TTGTTTCTTGGACAGTGGAGGATGCAGAGCAAGGTTGTACGGGTCACTTCCCCCCACACAACGCTCCATTaGGCAATCTGTAACGTCATA | + |
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Preference number: 3 (lower is better) Translates to: LFLGQWRMQSKVVRVTSPHTTLH*AICNVI Trigger: TATGACGTTACAGATTGCCAAATGGAGCGTTGTGTG...GGGGGAAGTGACCCGTACAACCTTGCTCTGCATCCTCCACTGTCCAAGAAACAA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR GCA 72 bp | CCGCTAAGTAAAGTGAGGCCTGCATGGGAGGTGCACTaGTTCCATCCTTACTACTGGTTTACAGCAAATTGT | + |
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Preference number: 3 (lower is better) Translates to: PLSKVRPAWEVH*FHPYYWFTANC Trigger: ACAATTTGCTGTAAACCAGTAGTAAGGATGGAAGCAGTGCACCTCCCATGCAGGCCTCACTTTACTTAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 72 bp | ATCACAATGTGTACAGTGTGTCCTCTCCTTGTTTCTTaGACAGTGGAGGATGCAGAGCAAGGTTGTACGGGT | + |
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Preference number: 3 (lower is better) Translates to: ITMCTVCPLLVS*TVEDAEQGCTG Trigger: ACCCGTACAACCTTGCTCTGCATCCTCCACTGTCCAAGAAACAAGGAGAGGACACACTGTACACATTGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR TCA 72 bp | TCACTTCCCCCAGCACACCTAACTGTGCAGCGAGTGTaGGAGGGAGTATTTATTGCATCAATTCTAAGAATG | + |
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Preference number: 3 (lower is better) Translates to: SLPPAHLTVQRV*EGVFIASILRM Trigger: CATTCTTAGAATTGATGCAATAAATACTCCCTCTCACACTCGCTGCACAGTTAGGTGTGCTGGGGGAAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CCA 72 bp | CCTGCATGGGAGGTGCACTGCTTCCATCCTTACTACTaGTTTACAGCAAATTGTCTTATAAAAATCCTCTCG | + |
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Preference number: 3 (lower is better) Translates to: PAWEVHCFHPYY*FTANCLIKILS Trigger: CGAGAGGATTTTTATAAGACAATTTGCTGTAAACCAGTAGTAAGGATGGAAGCAGTGCACCTCCCATGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR-3UTR CAA 90 bp | GGGCCTCTAGGGACACGGAGCTGTGTATTTTGCACATTTTCAAACATCAGAGATACGGAGCTGTGTATTTaGCACATTTTCAAACATCAG | + |
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Preference number: 3 (lower is better) Translates to: GPLGTRSCVFCTFSNIRDTELCI*HIFKHQ Trigger: CTGATGTTTGAAAATGTGCAAAATACACAGCTCCGT...ATCTCTGATGTTTGAAAATGTGCAAAATACACAGCTCCGTGTCCCTAGAGGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023686.15 ENSMUST00000133180.8 |
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| 3UTR TCA 72 bp | GGAGCCATACCAATCTTAGTCTTGGGAGTAAAAACCTaGCTTCAGCGTCATGTATACGTAGTGATATATTAT | + |
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Preference number: 3 (lower is better) Translates to: GAIPILVLGVKT*LQRHVYVVIYY Trigger: ATAATATATCACTACGTATACATGACGCTGAAGTCAGGTTTTTACTCCCAAGACTAAGATTGGTATGGCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023686.15 ENSMUST00000133180.8 |
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| CDS-3UTR GCA 90 bp | GCAGCGCTCAAACATGGGAAGGAGGGTCTGGTGTGGAGTGCGAACTTTCAGTACAAAGCGTGGTTCAGCTaGTCAGGCTTAGGGTACACC | + |
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Preference number: 4 (lower is better) Translates to: AALKHGKEGLVWSANFQYKAWFS*SGLGYT Trigger: GGTGTACCCTAAGCCTGAGCAGCTGAACCACGCTTT...GTACTGAAAGTTCGCACTCCACACCAGACCCTCCTTCCCATGTTTGAGCGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CAA 72 bp | CCTTGTTTCTTGGACAGTGGAGGATGCAGAGCAAGGTaGTACGGGTCACTTCCCCCAGCACACCTAACTGTG | + |
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Preference number: 4 (lower is better) Translates to: PCFLDSGGCRAR*YGSLPPAHLTV Trigger: CACAGTTAGGTGTGCTGGGGGAAGTGACCCGTACAACCTTGCTCTGCATCCTCCACTGTCCAAGAAACAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| CDS-3UTR GCA 90 bp | GCAGCGCTCAAACATGGGAAGGAGGGTCTGGTGTGGAGTGCGAACTTTCAGTACCTTAGGGTACACCACTaGCGCGTCAATCATTATCCA | + |
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Preference number: 4 (lower is better) Translates to: AALKHGKEGLVWSANFQYLRVHH*RVNHYP Trigger: TGGATAATGATTGACGCGGCAGTGGTGTACCCTAAG...GTACTGAAAGTTCGCACTCCACACCAGACCCTCCTTCCCATGTTTGAGCGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CAA 72 bp | AATCTTGACTCAAGGGAAAGGCCCACAGAAATATACTaGGGGCAAGCGCAGCGCTCAAACATGGGAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NLDSRERPTEIY*GQAQRSNMGRR Trigger: CCTCCTTCCCATGTTTGAGCGCTGCGCTTGCCCCAAGTATATTTCTGTGGGCCTTTCCCTTGAGTCAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CAA 72 bp | TATCACAATGTGTACAGTGTGTCCTCTCCTTGTTTCTaGGACAGTGGAGGATGCAGAGCAAGGTTGTACGGG | + |
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Preference number: 4 (lower is better) Translates to: YHNVYSVSSPCF*DSGGCRARLYG Trigger: CCCGTACAACCTTGCTCTGCATCCTCCACTGTCCAAGAAACAAGGAGAGGACACACTGTACACATTGTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CAA 72 bp | TGGCTCAGGGCCTCTAGGGACACGGAGCTGTGTATTTaGCACATTTTCAAACATCAGAGATACCAAGACAAA | + |
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Preference number: 4 (lower is better) Translates to: WLRASRDTELCI*HIFKHQRYQDK Trigger: TTTGTCTTGGTATCTCTGATGTTTGAAAATGTGCAAAATACACAGCTCCGTGTCCCTAGAGGCCCTGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CAA 72 bp | TCTGTATTATCACAATGTGTACAGTGTGTCCTCTCCTaGTTTCTTGGACAGTGGAGGATGCAGAGCAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SVLSQCVQCVLS*FLGQWRMQSKV Trigger: AACCTTGCTCTGCATCCTCCACTGTCCAAGAAACAAGGAGAGGACACACTGTACACATTGTGATAATACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| 3UTR CAA 72 bp | AAAAATCCTCTCGGGTTGAAAGTGCAACACAAAATCTaGACTCAAGGGAAAGGCCCACAGAAATATACTTGG | + |
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Preference number: 4 (lower is better) Translates to: KNPLGLKVQHKI*TQGKGPQKYTW Trigger: CCAAGTATATTTCTGTGGGCCTTTCCCTTGAGTCAAGATTTTGTGTTGCACTTTCAACCCGAGAGGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| CDS-3UTR TCA 90 bp | ATATTAGCTTGCCTAGTCGATGAAAAACCAAGACAAACTCAGGGCACAAAACTAATACAGCATTTATCATaGAGAAGGCCAGCGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: ILACLVDEKPRQTQGTKLIQHLS*RRPAWK Trigger: TTTCCACGCTGGCCTTCTTCATGATAAATGCTGTAT...TAGTTTTGTGCCCTGAGTTTGTCTTGGTTTTTCATCGACTAGGCAAGCTAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| CDS GCA 90 bp | ACCCGAGCACCAATATCCCTGCGACCACAGAGGCCACCGTGTTCCTaGGCTCGCTCCAGTCAATACACTCACACTCCGGCCAGCGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: TRAPISLRPQRPPCS*ARSSQYTHTPASGS Trigger: ACTTCCGCTGGCCGGAGTGTGAGTGTATTGACTGGAGCGAGCGCAGGAACACGGTGGCCTCTGTGGTCGCAGGGATATTGGTGCTCGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133180.8 |
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| CDS GCA 90 bp | ACTTTATACTCAATATCCCTGCGACCACAGAGGCCACCGTGTTCCTaGGCTCGCTCCAGTCAATACACTCACACTCCGGCCAGCGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: TLYSISLRPQRPPCS*ARSSQYTHTPASGS Trigger: ACTTCCGCTGGCCGGAGTGTGAGTGTATTGACTGGAGCGAGCGCAGGAACACGGTGGCCTCTGTGGTCGCAGGGATATTGAGTATAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141885.2 |
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| CDS GCA 72 bp | CCAATATCCCTGCGACCACAGAGGCCACCGTGTTCCTaGGCTCGCTCCAGTCAATACACTCACACTCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PISLRPQRPPCS*ARSSQYTHTPA Trigger: GGCCGGAGTGTGAGTGTATTGACTGGAGCGAGCGCAGGAACACGGTGGCCTCTGTGGTCGCAGGGATATTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133180.8 |
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| CDS GCA 72 bp | ACAATATCCCTGCGACCACAGAGGCCACCGTGTTCCTaGGCTCGCTCCAGTCAATACACTCACACTCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: TISLRPQRPPCS*ARSSQYTHTPA Trigger: GGCCGGAGTGTGAGTGTATTGACTGGAGCGAGCGCAGGAACACGGTGGCCTCTGTGGTCGCAGGGATATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023686.15 |
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| CDS GCA 72 bp | TCAATATCCCTGCGACCACAGAGGCCACCGTGTTCCTaGGCTCGCTCCAGTCAATACACTCACACTCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SISLRPQRPPCS*ARSSQYTHTPA Trigger: GGCCGGAGTGTGAGTGTATTGACTGGAGCGAGCGCAGGAACACGGTGGCCTCTGTGGTCGCAGGGATATTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141885.2 |
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