Pregenerated sensors for TMEM45B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041737Ensembl transcript IDs: ENSMUST00000048050.9, ENSMUST00000213807.2, ENSMUST00000217007.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCTAACTTGTGGTACTTTTCTGAGAAGAAAGTACCTGCTTGATTaGGAGAAGAGGGGCAAGTTATCAGAAGCAGCACGTGATGTCCGG | + |
|
Preference number: 1 (lower is better) Translates to: HLTCGTFLRRKYLLD*EKRGKLSEAARDVR Trigger: CCGGACATCACGTGCTGCTTCTGATAACTTGCCCCTCTTCTCTCAATCAAGCAGGTACTTTCTTCTCAGAAAAGTACCACAAGTTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR CCA 90 bp | ATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATaGATACAGAAAATGTGGTACATTTGTCGCCATCTAACTTGTGGT | + |
|
Preference number: 1 (lower is better) Translates to: IARSWKEPRCPSTEE*IQKMWYICRHLTCG Trigger: ACCACAAGTTAGATGGCGACAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR CCA 90 bp | AAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTaGTACATTTGTCGCCATCTAACTTGTGGTACTTTTCTGAGAAGA | + |
|
Preference number: 1 (lower is better) Translates to: KEPRCPSTEEWIQKM*YICRHLTCGTFLRR Trigger: TCTTCTCAGAAAAGTACCACAAGTTAGATGGCGACAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAAAATGTGGTACATTTGTCGCCATCTAACTTGTGGTACTTTTCTGAGAAGGTACAGGGGACAGGCTaGATCCTTTCCAGTGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TENVVHLSPSNLWYFSEKVQGTG*ILSSVV Trigger: AACAACACTGGAAAGGATGCAGCCTGTCCCCTGTAC...CTTCTCAGAAAAGTACCACAAGTTAGATGGCGACAAATGTACCACATTTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGTCGCCATCTAACTTGTGGTACTTTTCTGAGAAGAAAGTACCTGCTTGATCCTGCTTCATCCACATaGTCGCTTCCTAGTGTAATT | + |
|
Preference number: 2 (lower is better) Translates to: ICRHLTCGTFLRRKYLLDPASST*SLPSVI Trigger: AATTACACTAGGAAGCGACCATGTGGATGAAGCAGG...ATCAAGCAGGTACTTTCTTCTCAGAAAAGTACCACAAGTTAGATGGCGACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTGATTGAGAGAAGAGGGGCAAGTTATCAGAAGCAGCACGTGATGTCCGGCCACATAAGGCAAGCCTaGGAGTACCAGGGACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CLIERRGASYQKQHVMSGHIRQA*EYQGQE Trigger: CTCCTGTCCCTGGTACTCCAAGGCTTGCCTTATGTG...GCCGGACATCACGTGCTGCTTCTGATAACTTGCCCCTCTTCTCTCAATCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR CCA 72 bp | GAAGCAGCACGTGATGTCCGGCCTGCTTCATCCACATaGTCGCTTCCTAGTGTAATTCAGAGTCTTCGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: EAARDVRPASST*SLPSVIQSLRV Trigger: GACTCGAAGACTCTGAATTACACTAGGAAGCGACCATGTGGATGAAGCAGGCCGGACATCACGTGCTGCTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR CCA 72 bp | AGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATaGATACAGAAAATGTGGTACATTTGTCGCCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: SWKEPRCPSTEE*IQKMWYICRHL Trigger: TAGATGGCGACAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGCATCCTTTCCAGTGTaGTTTAAAAAGGATGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QKLERTQMSLNRGMDTENASFPV*FKKDVR Trigger: CCTCACATCCTTTTTAAACAACACTGGAAAGGATGC...ATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR CAA 72 bp | TTGGAGTACCAGGGACAGGAGCACATAAGGCAAGCCTaGGAGTACCAGGGACAGGAGCACATAAGGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LEYQGQEHIRQA*EYQGQEHIRQA Trigger: GGCTTGCCTTATGTGCTCCTGTCCCTGGTACTCCAAGGCTTGCCTTATGTGCTCCTGTCCCTGGTACTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGCCTTGGAGTACCAGGGACAGGAGCACATAAGGCAAGCCTTGGAGTACCATCAATGCGCTCCTGCTaGCGGCTCAGTCTGTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLGVPGTGAHKASLGVPSMRSC*RLSLLF Trigger: GAATAACAGACTGAGCCGTCAGCAGGAGCGCATTGA...TGGTACTCCAAGGCTTGCCTTATGTGCTCCTGTCCCTGGTACTCCAAGGCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR GCA 90 bp | GCCTTGAAGTACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATAGCAGGGAGTGGATGTaGTGGTCCAGGGGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALKYRGQAASFPVLFKKDSREWM*WSRGGR Trigger: CCGCCCTCCCCTGGACCAGCACATCCACTCCCTGCT...ATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTACTTCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCCAAGGGAGTGGATGTGCTaGTCCAGGGGAGGGCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGQAASFPVLFKKDVRSPREWMC*SRGGRL Trigger: CAACCGCCCTCCCCTGGACCAGCACATCCACTCCCT...TGGAGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| 3UTR CAA 72 bp | TTGGAGTACCAGGGACAGGAGCACATAAGGCAAGCCTaGAAGTACAGGGGACAGGCTGCATCCTTTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEYQGQEHIRQA*KYRGQAASFPV Trigger: CACTGGAAAGGATGCAGCCTGTCCCCTGTACTTCAAGGCTTGCCTTATGTGCTCCTGTCCCTGGTACTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR GCA 90 bp | GAGCACATAAGGCAAGCCTTGGAGTACCAGGGACAGGAGCACATAAGGCAAGCCCCATCTGGAACAAACTaGTCTGCCAGGATCCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: EHIRQALEYQGQEHIRQAPSGTN*SARIPM Trigger: CATTGGGATCCTGGCAGAGCAGTTTGTTCCAGATGG...GGCTTGCCTTATGTGCTCCTGTCCCTGGTACTCCAAGGCTTGCCTTATGTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTAGGGAGTGGATGTGCTaGTCCAGGGGAGGGCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGKNPDVPQQRNGYRKCGREWMC*SRGGRL Trigger: CAACCGCCCTCCCCTGGACCAGCACATCCACTCCCT...ACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGCCTTGGAGTACCAGGGACAGGAGCACATAAGGCAAGCCTTGGAGTACCAAGGTACATGGTGCTGTaGTGCCAATTCATCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLGVPGTGAHKASLGVPRYMVL*CQFISL Trigger: CAAGCTGATGAATTGGCAGCACAGCACCATGTACCT...TGGTACTCCAAGGCTTGCCTTATGTGCTCCTGTCCCTGGTACTCCAAGGCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR GCA 90 bp | TTGGAGTACCAGGGACAGGAGCACATAAGGCAAGCCTTGAAGTACAGGGGACAGAGGACAAATCCAATCTaGCAGAACCAGGTTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEYQGQEHIRQALKYRGQRTNPI*QNQVPC Trigger: GCAGGGAACCTGGTTCTGGCAGATTGGATTTGTCCT...CTGTCCCCTGTACTTCAAGGCTTGCCTTATGTGCTCCTGTCCCTGGTACTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTTGGAGTACCAGGGACAGGAGCACATAAGGCAAGCCTTGGAGTACCAGGGCGAAGAATAGGTACATaGTGCTGTGCTGCCAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGVPGTGAHKASLGVPGRRIGT*CCAANS Trigger: TGAATTGGCAGCACAGCACCATGTACCTATTCTTCG...CCCTGGTACTCCAAGGCTTGCCTTATGTGCTCCTGTCCCTGGTACTCCAAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCCACACCCCGCCACTCAAAAGGGCTaGCTGGTAAGTGTGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QAASFPVLFKKDVRSPHPATQKG*LVSVIR Trigger: TCTGATCACACTTACCAGTCAGCCCTTTTGAGTGGC...GGGGTGTGGAGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR GCA 90 bp | ATTTGTCGCCATCTAACTTGTGGTACTTTTCTGAGAAGAAAGTACCTGCTTGATAGCAGGGAGTGGATGTaGTGGTCCAGGGGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ICRHLTCGTFLRRKYLLDSREWM*WSRGGR Trigger: CCGCCCTCCCCTGGACCAGCACATCCACTCCCTGCT...ATCAAGCAGGTACTTTCTTCTCAGAAAAGTACCACAAGTTAGATGGCGACAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR CCA 90 bp | GCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCCACACCCCCATGCTCAGGTGAGGTCCATCTaGAACAAACTGCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASFPVLFKKDVRSPHPHAQVRSI*NKLLCQ Trigger: CTGGCAGAGCAGTTTGTTCCAGATGGACCTCACCTG...AGCATGGGGGTGTGGAGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCCACACCCCCATAGGACAAATCCAATCTaGCAGAACCAGGTTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AASFPVLFKKDVRSPHPHRTNPI*QNQVPC Trigger: GCAGGGAACCTGGTTCTGGCAGATTGGATTTGTCCT...ATGGGGGTGTGGAGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGCTTCTGGTCCCATTCTaGCCTTCCAAATGGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SWKEPRCPSTEEWIQKMWLLVPF*PSKWRE Trigger: TTCCCGCCATTTGGAAGGCCAGAATGGGACCAGAAG...CCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR CCA 90 bp | TACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCTTCTGGTCCCATTCTaGCCTTCCAAATGGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YRGQAASFPVLFKKDVRSLLVPF*PSKWRE Trigger: TTCCCGCCATTTGGAAGGCCAGAATGGGACCAGAAG...AGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCCATTGTCCATGTCCTTCTaGTCCCATTCTGGCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQAASFPVLFKKDVRSPLSMSF*SHSGLP Trigger: TGGAAGGCCAGAATGGGACCAGAAGGACATGGACAA...TGGAGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR TCA 90 bp | TACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTGCCACTCAAAAGGGCTaGCTGGTAAGTGTGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YRGQAASFPVLFKKDVRSATQKG*LVSVIR Trigger: TCTGATCACACTTACCAGTCAGCCCTTTTGAGTGGC...AGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR GCA 90 bp | TACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTAGAGATGCTGACAGCTaGTCCGAAAAGACCGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YRGQAASFPVLFKKDVRSRDADS*SEKTEQ Trigger: CTGTTCGGTCTTTTCGGAGCAGCTGTCAGCATCTCT...AGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGTCACTGCACCTTCAATaGTCTCAATGCGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKYRGQAASFPVLFKKDVSLHLQ*SQCAPA Trigger: AGCAGGAGCGCATTGAGATCATTGAAGGTGCAGTGA...CACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTACTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR TCA 90 bp | GCCTTGAAGTACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGCTTCTGAATCCCAATaGTTTCTCCTTCTGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALKYRGQAASFPVLFKKDASESQ*FLLLHV Trigger: GACGTGCAGAAGGAGAAATCATTGGGATTCAGAAGC...ATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTACTTCAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCCACACCCCAGAATAGGTACATGGTaGTGTGCTGCCAATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QAASFPVLFKKDVRSPHPRIGTW*CAANSS Trigger: TGATGAATTGGCAGCACAGCACCATGTACCTATTCT...GGGGTGTGGAGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGAGATGCTGACAGCTaGTCCGAAAAGACCGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LKYRGQAASFPVLFKKDVRDADS*SEKTEQ Trigger: CTGTTCGGTCTTTTCGGAGCAGCTGTCAGCATCTCT...CACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTACTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCCACACAATGATTTCTCCTTCTaGACGTCTCTTCACCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQAASFPVLFKKDVRSPHNDFSF*TSLHPS Trigger: ACTCGGGTGAAGAGACGTGCAGAAGGAGAAATCATT...GTGTGGAGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTTCTGGCCTTCCAAATaGCGGGAACAGGACAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RSWKEPRCPSTEEWIQKMFWPSK*REQDKS Trigger: GGATTTGTCCTGTTCCCGCCATTTGGAAGGCCAGAA...CATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR CCA 90 bp | TTGAAGTACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGTTCTGGCCTTCCAAATaGCGGGAACAGGACAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LKYRGQAASFPVLFKKDVFWPSK*REQDKS Trigger: GGATTTGTCCTGTTCCCGCCATTTGGAAGGCCAGAA...CACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTACTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAAAATGTGGTACATTTGTCGCCATCTAACTTGTGGTACTTTTCTGAGAAGCAGTGGGTACTTCACTaGCCACCACAGCCCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: TENVVHLSPSNLWYFSEKQWVLH*PPQPHY Trigger: ATAGTGGGGCTGTGGTGGTCAGTGAAGTACCCACTG...CTTCTCAGAAAAGTACCACAAGTTAGATGGCGACAAATGTACCACATTTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR GCA 90 bp | GCCTTGAAGTACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATCAGGATCCCAATGATTaGAAACAGAGTCTTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALKYRGQAASFPVLFKKDQDPND*KQSLHC Trigger: GCAGTGAAGACTCTGTTTGCAATCATTGGGATCCTG...ATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTACTTCAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR GCA 90 bp | AGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGAATGATTTCTCCTTCTaGACGTCTCTTCACCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SWKEPRCPSTEEWIQKMWNDFSF*TSLHPS Trigger: ACTCGGGTGAAGAGACGTGCAGAAGGAGAAATCATT...CCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR CCA 90 bp | AAGTACAGGGGACAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGCGAAGAATAGGTACATaGTGCTGTGCTGCCAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KYRGQAASFPVLFKKDVRRRIGT*CCAANS Trigger: TGAATTGGCAGCACAGCACCATGTACCTATTCTTCG...CCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTGTCCCCTGTACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCCACACCCCAAACAGAGTCTTCACTaGACCTTCAATGATCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QAASFPVLFKKDVRSPHPKQSLH*TFNDLN Trigger: ATTGAGATCATTGAAGGTGCAGTGAAGACTCTGTTT...GGGGTGTGGAGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGCAGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTTGTCCATGTCCTTCTaGTCCCATTCTGGCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KEPRCPSTEEWIQKMWYILSMSF*SHSGLP Trigger: TGGAAGGCCAGAATGGGACCAGAAGGACATGGACAA...AATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR GCA 90 bp | GTTCATAGCAGTCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCTGGAACAAACTGCTCTaGCAGGATCCCAATGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHSSLIYNSQKLERTQMSWNKLL*QDPNDC Trigger: GCAATCATTGGGATCCTGGCAGAGCAGTTTGTTCCA...GGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGACTGCTATGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR TCA 90 bp | TTCTGGAAGGTGTTCACTTTTCTGTGTGGACAGTGTTACTACTCTAATACAGATGCTTCTGAATCCCAATaGTTTCTCCTTCTGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: FWKVFTFLCGQCYYSNTDASESQ*FLLLHV Trigger: GACGTGCAGAAGGAGAAATCATTGGGATTCAGAAGC...ATCTGTATTAGAGTAGTAACACTGTCCACACAGAAAAGTGAACACCTTCCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| 3UTR CAA 72 bp | CTCAACAGAGGAATGGATACAGAAAATGTGGTACATTaGTCGCCATCTAACTTGTGGTACTTTTCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNRGMDTENVVH*SPSNLWYFSEK Trigger: CTTCTCAGAAAAGTACCACAAGTTAGATGGCGACAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS TCA 90 bp | CACCGAAGAATAGGTACATGGTGCTGTGCTGCCAATTCATCAGCTTaGCCCATTGGTTCTCGTGGTAGAGGTGCAGGTGAGGTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRRIGTWCCAANSSA*PIGSRGRGAGEVHL Trigger: CAGATGGACCTCACCTGCACCTCTACCACGAGAACCAATGGGTCAAGCTGATGAATTGGCAGCACAGCACCATGTACCTATTCTTCGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS GCA 90 bp | CTCGTGGTAGAGGTGCAGGTGAGGTCCATCTGGAACAAACTGCTCTaGCAGGATCCCAATGATTGCAAACAGAGTCTTCACTGCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVVEVQVRSIWNKLL*QDPNDCKQSLHCTF Trigger: GAAGGTGCAGTGAAGACTCTGTTTGCAATCATTGGGATCCTGGCAGAGCAGTTTGTTCCAGATGGACCTCACCTGCACCTCTACCACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS TCA 90 bp | CACGTCTCTTCACCCGAGTCAGAAAGCAGTAAACAAGGGAGTAGTTaGTGGCTACGATGCAGAGAGCAACCAAGTAGTGCCAGCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: HVSSPESESSKQGSS*WLRCREQPSSASRS Trigger: GCTTCTGCTGGCACTACTTGGTTGCTCTCTGCATCGTAGCCATCAACTACTCCCTTGTTTACTGCTTTCTGACTCGGGTGAAGAGACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS GCA 90 bp | AAACTGCTCTGCCAGGATCCCAATGATTGCAAACAGAGTCTTCACTaGACCTTCAATGATCTCAATGCGCTCCTGCTGACGGCTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLLCQDPNDCKQSLH*TFNDLNALLLTAQS Trigger: AGACTGAGCCGTCAGCAGGAGCGCATTGAGATCATTGAAGGTGCAGTGAAGACTCTGTTTGCAATCATTGGGATCCTGGCAGAGCAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS-3UTR CAA 90 bp | GCATCCTTTCCAGTGTTGTTTAAAAAGGATGTGAGGTCTCCACACCCCCATGCTGTGATGAACATGATGTaGTCCATGTCCTTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASFPVLFKKDVRSPHPHAVMNMM*SMSFWS Trigger: GGACCAGAAGGACATGGACAACATCATGTTCATCAC...AGCATGGGGGTGTGGAGACCTCACATCCTTTTTAAACAACACTGGAAAGGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAAATGTGGTACATTTGTCGCCATCTAACTTGTGGTACTTTTCTGAGAAGGTGATGAACATGATGTaGTCCATGTCCTTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TENVVHLSPSNLWYFSEKVMNMM*SMSFWS Trigger: GGACCAGAAGGACATGGACAACATCATGTTCATCAC...CTTCTCAGAAAAGTACCACAAGTTAGATGGCGACAAATGTACCACATTTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS GCA 72 bp | ATCCCGAAGGATAACCTCCAGAGAGATGCTGACAGCTaGTCCGAAAAGACCGAACAGCAGCAGGGAGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: IPKDNLQRDADS*SEKTEQQQGVD Trigger: ATCCACTCCCTGCTGCTGTTCGGTCTTTTCGGAGCAGCTGTCAGCATCTCTCTGGAGGTTATCCTTCGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS CAA 72 bp | CATGGTGCTGTGCTGCCAATTCATCAGCTTGACCCATaGGTTCTCGTGGTAGAGGTGCAGGTGAGGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: HGAVLPIHQLDP*VLVVEVQVRSI Trigger: GATGGACCTCACCTGCACCTCTACCACGAGAACCAATGGGTCAAGCTGATGAATTGGCAGCACAGCACCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS GCA 72 bp | CCCGAGACACCGAAGAATAGGTACATGGTGCTGTGCTaGCAATTCATCAGCTTGACCCATTGGTTCTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PETPKNRYMVLC*QFISLTHWFSW Trigger: CCACGAGAACCAATGGGTCAAGCTGATGAATTGGCAGCACAGCACCATGTACCTATTCTTCGGTGTCTCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS TCA 72 bp | ATAGGTACATGGTGCTGTGCTGCCAATTCATCAGCTTaGCCCATTGGTTCTCGTGGTAGAGGTGCAGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: IGTWCCAANSSA*PIGSRGRGAGE Trigger: CTCACCTGCACCTCTACCACGAGAACCAATGGGTCAAGCTGATGAATTGGCAGCACAGCACCATGTACCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS GCA 72 bp | GAGGTGCAGGTGAGGTCCATCTGGAACAAACTGCTCTaGCAGGATCCCAATGATTGCAAACAGAGTCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: EVQVRSIWNKLL*QDPNDCKQSLH Trigger: GTGAAGACTCTGTTTGCAATCATTGGGATCCTGGCAGAGCAGTTTGTTCCAGATGGACCTCACCTGCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS GCA 72 bp | AGTCCCGAGACACCGAAGAATAGGTACATGGTGCTGTaGTGCCAATTCATCAGCTTGACCCATTGGTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPETPKNRYMVL*CQFISLTHWFS Trigger: CGAGAACCAATGGGTCAAGCTGATGAATTGGCAGCACAGCACCATGTACCTATTCTTCGGTGTCTCGGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048050.9 |
||
| CDS GCA 72 bp | AACAGGACAAATCCAATCTGCCAGAACCAGGTTCCCTaGAAGATAAGGAGACTGGTTCGGAAGAGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NRTNPICQNQVP*KIRRLVRKSSS Trigger: GCTGGAGCTCTTCCGAACCAGTCTCCTTATCTTGCAGGGAACCTGGTTCTGGCAGATTGGATTTGTCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS CCA 72 bp | CACATGGTGATGAACATGATGTTGTCCATGTCCTTCTaGTCCCATTCTGGCCTTCCAAATGGCGGGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: HMVMNMMLSMSF*SHSGLPNGGNR Trigger: CCTGTTCCCGCCATTTGGAAGGCCAGAATGGGACCAGAAGGACATGGACAACATCATGTTCATCACCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000217007.2 |
||
| CDS TCA 72 bp | TTCACTGCACCTTCAATGATCTCAATGCGCTCCTGCTaGCGGCTCAGTCTGTTATTCTTCAAGCCCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FTAPSMISMRSC*RLSLLFFKPLW Trigger: CCACAAGGGCTTGAAGAATAACAGACTGAGCCGTCAGCAGGAGCGCATTGAGATCATTGAAGGTGCAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048050.9 ENSMUST00000213807.2 |
||