Pregenerated sensors for TMEM45A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046748Ensembl transcript IDs: ENSMUST00000067173.8, ENSMUST00000227043.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATCTCAGAATCCCAAGTGAGAGCAATACAACTAAGCTGAGACCCTaGTCTGGTGTCAGGGTCCCCCAAGGGGATGGCAGAGAGGTCATG | + |
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Preference number: 1 (lower is better) Translates to: YLRIPSESNTTKLRP*SGVRVPQGDGREVM Trigger: CATGACCTCTCTGCCATCCCCTTGGGGGACCCTGACACCAGAGCAGGGTCTCAGCTTAGTTGTATTGCTCTCACTTGGGATTCTGAGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR CCA 90 bp | AGCAGAACACAGGAGACTAGAAGTGAAGAAAGTCACACATACAGGTaGAAATCATGCTTTCTCACAAGTCACAGATGTGAGAGTGGTATG | + |
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Preference number: 1 (lower is better) Translates to: SRTQETRSEESHTYR*KSCFLTSHRCESGM Trigger: CATACCACTCTCACATCTGTGACTTGTGAGAAAGCATGATTTCCACCTGTATGTGTGACTTTCTTCACTTCTAGTCTCCTGTGTTCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTATCTCAGAACCCCTGAGTGAGGGCAATCCAAGAAGAAATAAAGGCTATATGGCAGAGAGGTCATaGGAACCTGGATGCAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: RAISEPLSEGNPRRNKGYMAERS*EPGCKG Trigger: GCCTTTGCATCCAGGTTCTCATGACCTCTCTGCCAT...ATAGCCTTTATTTCTTCTTGGATTGCCCTCACTCAGGGGTTCTGAGATAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAATCCAAGAAGAAATAAAGGCTATCTCAGAATCCCAAGTGAGAGCAATACAGGTCCCCCAAGGGGATaGCAGAGAGGTCATGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GNPRRNKGYLRIPSESNTGPPRG*QRGHEN Trigger: GTTCTCATGACCTCTCTGCCATCCCCTTGGGGGACC...TGTATTGCTCTCACTTGGGATTCTGAGATAGCCTTTATTTCTTCTTGGATTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR CAA 90 bp | TTTCAATGCTGCGGTAGCTTTCTCCTCTTACAGGCACTGCTTTCATaGATGCTCCTTTCACAGTGTCTCATAGCGTTGTTACAATGCACC | + |
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Preference number: 2 (lower is better) Translates to: FQCCGSFLLLQALLS*MLLSQCLIALLQCT Trigger: GGTGCATTGTAACAACGCTATGAGACACTGTGAAAGGAGCATCAATGAAAGCAGTGCCTGTAAGAGGAGAAAGCTACCGCAGCATTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTATCTCAGAACCCCTGAGTGAGGGCAATCCAAGAAGAAATAAAGGCTATCATGAACCCTGTCTTTaGAGGGTTTATAGATCTCTA | + |
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Preference number: 2 (lower is better) Translates to: RAISEPLSEGNPRRNKGYHEPCL*RVYRSL Trigger: TAGAGATCTATAAACCCTCCAAAGACAGGGTTCATG...ATAGCCTTTATTTCTTCTTGGATTGCCCTCACTCAGGGGTTCTGAGATAGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTATCTCAGAACCCCTGAGTGAGGGCAATCCAAGAAGAAATAAAGGCTATACTAAAATGGTAAACTaGAAAGTAGAGGAGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: RAISEPLSEGNPRRNKGYTKMVN*KVEERV Trigger: GACTCTCTCCTCTACTTTTCAGTTTACCATTTTAGT...ATAGCCTTTATTTCTTCTTGGATTGCCCTCACTCAGGGGTTCTGAGATAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGGCTATCTCAGAACCCCTGAGTGAGGGCAATCCAAGAAGAAATAAAGGCTTCCTATGGGAATCATaGAAGCTACTTTCTGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: MRAISEPLSEGNPRRNKGFLWES*KLLSEF Trigger: AAATTCAGAAAGTAGCTTCCATGATTCCCATAGGAA...GCCTTTATTTCTTCTTGGATTGCCCTCACTCAGGGGTTCTGAGATAGCCCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAATCCAAGAAGAAATAAAGGCTATCTCAGAATCCCAAGTGAGAGCAATACATCCTTCAAAGAGTTCTaGTCAGCTTTTCCTCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GNPRRNKGYLRIPSESNTSFKEF*SAFPLG Trigger: TCCAAGAGGAAAAGCTGATCAGAACTCTTTGAAGGA...TGTATTGCTCTCACTTGGGATTCTGAGATAGCCTTTATTTCTTCTTGGATTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCACACATACAGGTGGAAATCATGCTTTCTCACAAGTCACAGATGTGAGAGTATCAGCTTTTCCTCTTaGAGAACTGAAGTAATTGGG | + |
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Preference number: 2 (lower is better) Translates to: SHTYRWKSCFLTSHRCESISFSS*RTEVIG Trigger: CCCAATTACTTCAGTTCTCCAAGAGGAAAAGCTGAT...ACTCTCACATCTGTGACTTGTGAGAAAGCATGATTTCCACCTGTATGTGTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGTGATAATTCGTCCCCTGGGAAGATATAAATTATATCAGATGAGACACCAGGATCTTTACCCTGCATaGATGATGGCTTCTCGTATA | + |
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Preference number: 2 (lower is better) Translates to: VVIIRPLGRYKLYQMRHQDLYPA*MMASRI Trigger: TATACGAGAAGCCATCATCCATGCAGGGTAAAGATC...CTGGTGTCTCATCTGATATAATTTATATCTTCCCAGGGGACGAATTATCACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAATCCAAGAAGAAATAAAGGCTATCTCAGAATCCCAAGTGAGAGCAATACATCCTTTAGAGAGATGTaGTCAACTTTTTCTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: GNPRRNKGYLRIPSESNTSFREM*STFSLG Trigger: TCCTAGAGAAAAAGTTGACCACATCTCTCTAAAGGA...TGTATTGCTCTCACTTGGGATTCTGAGATAGCCTTTATTTCTTCTTGGATTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR TCA 72 bp | GTGTCAGGGTCCCCCAAGGGGATGGCAGAGAGGTCATaGGAACCTGGATGCAAAGGCACAGTGGGAGATGAA | + |
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Preference number: 3 (lower is better) Translates to: VSGSPKGMAERS*EPGCKGTVGDE Trigger: TTCATCTCCCACTGTGCCTTTGCATCCAGGTTCTCATGACCTCTCTGCCATCCCCTTGGGGGACCCTGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR GCA 72 bp | ATCCCAAGTGAGAGCAATACAACTAAGCTGAGACCCTaGTCTGGTGTCAGGGTCCCCCAAGGGGATGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: IPSESNTTKLRP*SGVRVPQGDGR Trigger: TCTGCCATCCCCTTGGGGGACCCTGACACCAGAGCAGGGTCTCAGCTTAGTTGTATTGCTCTCACTTGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR TCA 72 bp | ATCTCAGAATCCCAAGTGAGAGCAATACAACTAAGCTaGGACCCTGCTCTGGTGTCAGGGTCCCCCAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: ISESQVRAIQLS*DPALVSGSPKG Trigger: CCCCTTGGGGGACCCTGACACCAGAGCAGGGTCTCAGCTTAGTTGTATTGCTCTCACTTGGGATTCTGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR TCA 72 bp | TATTGTGAAACCAAACACACTGGGCTCGCCTCTTCTTaGGTACAAGAAGCAGAACACAGGAGACTAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: YCETKHTGLASS*VQEAEHRRLEV Trigger: CACTTCTAGTCTCCTGTGTTCTGCTTCTTGTACTCAAGAAGAGGCGAGCCCAGTGTGTTTGGTTTCACAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR CAA 90 bp | AGTCACACATACAGGTGGAAATCATGCTTTCTCACAAGTCACAGATGTGAGAGTCAGGCACTGCTTTCATaGATGCTCCTTTCACAGTGT | + |
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Preference number: 3 (lower is better) Translates to: SHTYRWKSCFLTSHRCESQALLS*MLLSQC Trigger: ACACTGTGAAAGGAGCATCAATGAAAGCAGTGCCTG...ACTCTCACATCTGTGACTTGTGAGAAAGCATGATTTCCACCTGTATGTGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGGACACCATGGTATTCCACCACCTTCATATTGTGAAACCAAACACACTGGGTCCCCAGCTTGTATCTaGTTTGAGTGTGTGTATTTA | + |
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Preference number: 3 (lower is better) Translates to: PGHHGIPPPSYCETKHTGSPACI*FECVYL Trigger: TAAATACACACACTCAAACAAGATACAAGCTGGGGA...CCCAGTGTGTTTGGTTTCACAATATGAAGGTGGTGGAATACCATGGTGTCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR CCA 72 bp | CAGAGAGGTCATGAGAACCTGGATGCAAAGGCACAGTaGGAGATGAAAGCATTCTTGACTAAAATGGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: QRGHENLDAKAQ*EMKAFLTKMVN Trigger: GTTTACCATTTTAGTCAAGAATGCTTTCATCTCCCACTGTGCCTTTGCATCCAGGTTCTCATGACCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTCTATTAGGACTACCTATTTCATAAGTGTACATGTTCTACAGATATACCACCTATTAATTCTTTTCTaGCCAACTCAGAGTCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SSIRTTYFISVHVLQIYHLLILF*PTQSLP Trigger: TGGGAGACTCTGAGTTGGCAAGAAAAGAATTAATAG...GTGGTATATCTGTAGAACATGTACACTTATGAAATAGGTAGTCCTAATAGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| 3UTR TCA 72 bp | GATCATTTTCCTATGGGAATCATGGAAGCTACTTTCTaGATTTGCCTGATTTCTACTGTTTTTCAGTATGCT | + |
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Preference number: 3 (lower is better) Translates to: DHFPMGIMEATF*ICLISTVFQYA Trigger: AGCATACTGAAAAACAGTAGAAATCAGGCAAATTCAGAAAGTAGCTTCCATGATTCCCATAGGAAAATGATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| CDS-3UTR TCA 90 bp | CTCTTACAGGCACTGCTTTCATTGATGCTCCTTTCACAGTGTCTCATAGCGTTGACTCCAGGAAGAATGTaGCCTCCAGCATCCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LLQALLSLMLLSQCLIALTPGRM*PPASPG Trigger: CCCAGGGGATGCTGGAGGTCACATTCTTCCTGGAGT...CAACGCTATGAGACACTGTGAAAGGAGCATCAATGAAAGCAGTGCCTGTAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTATCTCAGAACCCCTGAGTGAGGGCAATCCAAGAAGAAATAAAGGCTATATCCCCTGGGACCTTTaGGTGATATGGGCCGACTCT | + |
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Preference number: 4 (lower is better) Translates to: RAISEPLSEGNPRRNKGYIPWDL*VIWADS Trigger: AGAGTCGGCCCATATCACCCAAAGGTCCCAGGGGAT...ATAGCCTTTATTTCTTCTTGGATTGCCCTCACTCAGGGGTTCTGAGATAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| CDS-3UTR CCA 90 bp | CTCTTACAGGCACTGCTTTCATTGATGCTCCTTTCACAGTGTCTCATAGCGTTGATCCCCTGGGACCTTTaGGTGATATGGGCCGACTCT | + |
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Preference number: 4 (lower is better) Translates to: LLQALLSLMLLSQCLIALIPWDL*VIWADS Trigger: AGAGTCGGCCCATATCACCCAAAGGTCCCAGGGGAT...CAACGCTATGAGACACTGTGAAAGGAGCATCAATGAAAGCAGTGCCTGTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR GCA 90 bp | ATGAGGGCTATCTCAGAACCCCTGAGTGAGGGCAATCCAAGAAGAAATAAAGGCTTCAGGTCCCATGCATaGTCCATATCTTTGGGATAC | + |
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Preference number: 4 (lower is better) Translates to: MRAISEPLSEGNPRRNKGFRSHA*SISLGY Trigger: GTATCCCAAAGATATGGAGCATGCATGGGACCTGAA...GCCTTTATTTCTTCTTGGATTGCCCTCACTCAGGGGTTCTGAGATAGCCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| CDS-3UTR TCA 90 bp | AATCATGCTTTCTCACAAGTCACAGATGTGAGAGTGGTATGTAAAATGCATCTAACTCCAGGAAGAATGTaGCCTCCAGCATCCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NHAFSQVTDVRVVCKMHLTPGRM*PPASPG Trigger: CCCAGGGGATGCTGGAGGTCACATTCTTCCTGGAGT...TAGATGCATTTTACATACCACTCTCACATCTGTGACTTGTGAGAAAGCATGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| CDS-3UTR TCA 90 bp | TGCTGCGGTAGCTTTCTCCTCTTACAGGCACTGCTTTCATTGATGCTCCTTTCAAGAATAAAGCCAATCTaGACAAAACAAGCCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: CCGSFLLLQALLSLMLLSRIKPI*TKQAPC Trigger: ACAGGGGGCTTGTTTTGTTCAGATTGGCTTTATTCT...TGAAAGGAGCATCAATGAAAGCAGTGCCTGTAAGAGGAGAAAGCTACCGCAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR GCA 90 bp | CATAGCGTTGTTACAATGCACCCCAGCAATCATTCCTCTTATCCTTTAGAGAGACGCAGTTGGGCCTCCTaGATTTCTTTATGCGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: HSVVTMHPSNHSSYPLERRSWAS*ISLCGD Trigger: ATCACCGCATAAAGAAATGCAGGAGGCCCAACTGCG...TCTCTCTAAAGGATAAGAGGAATGATTGCTGGGGTGCATTGTAACAACGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| 3UTR CAA 72 bp | TGCGGTAGCTTTCTCCTCTTACAGGCACTGCTTTCATaGATGCTCCTTTCACAGTGTCTCATAGCGTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: CGSFLLLQALLS*MLLSQCLIALL Trigger: TAACAACGCTATGAGACACTGTGAAAGGAGCATCAATGAAAGCAGTGCCTGTAAGAGGAGAAAGCTACCGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR GCA 90 bp | GTTGTGATAATTCGTCCCCTGGGAAGATATAAATTATATCAGATGAGACACCAGCGCAGTTGGGCCTCCTaGATTTCTTTATGCGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: VVIIRPLGRYKLYQMRHQRSWAS*ISLCGD Trigger: ATCACCGCATAAAGAAATGCAGGAGGCCCAACTGCG...CTGGTGTCTCATCTGATATAATTTATATCTTCCCAGGGGACGAATTATCACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| CDS-3UTR GCA 90 bp | CATAGCGTTGTTACAATGCACCCCAGCAATCATTCCTCTTATCCTTTAGAGAGATTCAGGTCCCATGCATaGTCCATATCTTTGGGATAC | + |
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Preference number: 4 (lower is better) Translates to: HSVVTMHPSNHSSYPLERFRSHA*SISLGY Trigger: GTATCCCAAAGATATGGAGCATGCATGGGACCTGAA...TCTCTCTAAAGGATAAGAGGAATGATTGCTGGGGTGCATTGTAACAACGCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR CCA 90 bp | GAGAACCTGGATGCAAAGGCACAGTGGGAGATGAAAGCATTCTTGACTAAAATGGCTCGAGATAAAAATTaGGGGGTAATAAGGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: ENLDAKAQWEMKAFLTKMARDKN*GVIREE Trigger: TTCCTCCCTTATTACCCCCCAATTTTTATCTCGAGC...CATTTTAGTCAAGAATGCTTTCATCTCCCACTGTGCCTTTGCATCCAGGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| CDS-3UTR TCA 90 bp | CTTTCTCCTCTTACAGGCACTGCTTTCATTGATGCTCCTTTCACAGTGTCTCATTTGACAACATTAATGTaGTCAAAGAGACTGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LSPLTGTAFIDAPFTVSHLTTLM*SKRLAV Trigger: CACTGCCAGTCTCTTTGATCACATTAATGTTGTCAA...ATGAGACACTGTGAAAGGAGCATCAATGAAAGCAGTGCCTGTAAGAGGAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR TCA 90 bp | GGGAACAACCCTCTTATCCTTCAAAGAGTTCTGATCAGCTTTTCCTCTTGGAGATCACATACCATCTTCTaGGTCTTCTTGCTGTTCATA | + |
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Preference number: 4 (lower is better) Translates to: GNNPLILQRVLISFSSWRSHTIF*VFLLFI Trigger: TATGAACAGCAAGAAGACTCAGAAGATGGTATGTGA...TCTCCAAGAGGAAAAGCTGATCAGAACTCTTTGAAGGATAAGAGGGTTGTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067173.8 |
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| CDS-3UTR TCA 90 bp | CTTTCTCCTCTTACAGGCACTGCTTTCATTGATGCTCCTTTCACAGTGTCTCATTCACATACCATCTTCTaGGTCTTCTTGCTGTTCATA | + |
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Preference number: 4 (lower is better) Translates to: LSPLTGTAFIDAPFTVSHSHTIF*VFLLFI Trigger: TATGAACAGCAAGAAGACTCAGAAGATGGTATGTGA...ATGAGACACTGTGAAAGGAGCATCAATGAAAGCAGTGCCTGTAAGAGGAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR CCA 90 bp | TACAATGCACCCCAGCAATCATTCCTCTTATCCTTTAGAGAGATGTGGTCAACTGCTCGAGATAAAAATTaGGGGGTAATAAGGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: YNAPQQSFLLSFREMWSTARDKN*GVIREE Trigger: TTCCTCCCTTATTACCCCCCAATTTTTATCTCGAGC...AGTTGACCACATCTCTCTAAAGGATAAGAGGAATGATTGCTGGGGTGCATTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR TCA 90 bp | AATGCACCCCAGCAATCATTCCTCTTATCCTTTAGAGAGATGTGGTCAACTTTTTTGACAACATTAATGTaGTCAAAGAGACTGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: NAPQQSFLLSFREMWSTFLTTLM*SKRLAV Trigger: CACTGCCAGTCTCTTTGATCACATTAATGTTGTCAA...AAAAGTTGACCACATCTCTCTAAAGGATAAGAGGAATGATTGCTGGGGTGCATT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR CAA 90 bp | TGCGGTAGCTTTCTCCTCTTACAGGCACTGCTTTCATTGATGCTCCTTTCACAGTTGCCAGTTCCGCAGTaGGGCCTCCTGCATTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: CGSFLLLQALLSLMLLSQLPVPQ*GLLHFF Trigger: AAAGAAATGCAGGAGGCCCAACTGCGGAACTGGCAA...CTGTGAAAGGAGCATCAATGAAAGCAGTGCCTGTAAGAGGAGAAAGCTACCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR CAA 90 bp | AATGCACCCCAGCAATCATTCCTCTTATCCTTTAGAGAGATGTGGTCAACTTTTTTGCCAGTTCCGCAGTaGGGCCTCCTGCATTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: NAPQQSFLLSFREMWSTFLPVPQ*GLLHFF Trigger: AAAGAAATGCAGGAGGCCCAACTGCGGAACTGGCAA...AAAAGTTGACCACATCTCTCTAAAGGATAAGAGGAATGATTGCTGGGGTGCATT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR CAA 90 bp | GTGTCTCATAGCGTTGTTACAATGCACCCCAGCAATCATTCCTCTTATCCTTTAAGCTCCATAACCACATaGTTCTTTGTGAGGAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: VSHSVVTMHPSNHSSYPLSSITT*FFVRRN Trigger: ATTCCTCCTCACAAAGAACAATGTGGTTATGGAGCT...TAAAGGATAAGAGGAATGATTGCTGGGGTGCATTGTAACAACGCTATGAGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR CAA 90 bp | CATAGCGTTGTTACAATGCACCCCAGCAATCATTCCTCTTATCCTTTAGAGAGAAGCTCCATAACCACATaGTTCTTTGTGAGGAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: HSVVTMHPSNHSSYPLERSSITT*FFVRRN Trigger: ATTCCTCCTCACAAAGAACAATGTGGTTATGGAGCT...TCTCTCTAAAGGATAAGAGGAATGATTGCTGGGGTGCATTGTAACAACGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS-3UTR CAA 90 bp | AATGCACCCCAGCAATCATTCCTCTTATCCTTTAGAGAGATGTGGTCAACTTTTGCATGCTCCATATCTTaGGGATACAGAATAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: NAPQQSFLLSFREMWSTFACSIS*GYRIKP Trigger: TGGCTTTATTCTGTATCCCAAAGATATGGAGCATGC...AAAAGTTGACCACATCTCTCTAAAGGATAAGAGGAATGATTGCTGGGGTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS CAA 72 bp | CAGGAAGAATGTGACCTCCAGCATCCCCTGGGACCTTaGGGTGATATGGGCCGACTCTTGCTCCCGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QEECDLQHPLGP*GDMGRLLLPSH Trigger: ATGGCTCGGGAGCAAGAGTCGGCCCATATCACCCAAAGGTCCCAGGGGATGCTGGAGGTCACATTCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS CCA 72 bp | AGGAAGAATGTGACCTCCAGCATCCCCTGGGACCTTTaGGTGATATGGGCCGACTCTTGCTCCCGAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: RKNVTSSIPWDL*VIWADSCSRAI Trigger: AATGGCTCGGGAGCAAGAGTCGGCCCATATCACCCAAAGGTCCCAGGGGATGCTGGAGGTCACATTCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS CAA 90 bp | CCCTGTAGCATGGTGAGACTTGACCTCAGGAGCTCCATAACCACATaGTTCTTTGTGAGGAGGAATTCTATAAAGGCAGCCAGACCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PCSMVRLDLRSSITT*FFVRRNSIKAARPA Trigger: GGCTGGTCTGGCTGCCTTTATAGAATTCCTCCTCACAAAGAACAATGTGGTTATGGAGCTCCTGAGGTCAAGTCTCACCATGCTACAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS CAA 90 bp | GTGATCAAAGAGACTGGCAGTGATCTAATGGTGAAACATAAGATCTaGGTCACACCCAGCATTGCAAGGACCACGTACATGATGATGTGT | + |
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Preference number: 6 (lower is better) Translates to: VIKETGSDLMVKHKI*VTPSIARTTYMMMC Trigger: ACACATCATCATGTACGTGGTCCTTGCAATGCTGGGTGTGACCAAGATCTTATGTTTCACCATTAGATCACTGCCAGTCTCTTTGATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS GCA 72 bp | ATTATAGTATTGTTGACATCATTCAGGTCCCATGCATaGTCCATATCTTTGGGATACAGAATAAAGCCAATC | + |
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Preference number: 6 (lower is better) Translates to: IIVLLTSFRSHA*SISLGYRIKPI Trigger: GATTGGCTTTATTCTGTATCCCAAAGATATGGAGCATGCATGGGACCTGAATGATGTCAACAATACTATAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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| CDS GCA 72 bp | AAGAATTATAGTATTGTTGACATCATTCAGGTCCCATaGATGCTCCATATCTTTGGGATACAGAATAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: KNYSIVDIIQVP*MLHIFGIQNKA Trigger: GGCTTTATTCTGTATCCCAAAGATATGGAGCATGCATGGGACCTGAATGATGTCAACAATACTATAATTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067173.8 ENSMUST00000227043.2 |
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