Pregenerated sensors for TMEM43 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030095Ensembl transcript IDs: ENSMUST00000032183.6
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTACCCAGAGGCTTGGTGTGGCGTGCACTCCTCCAAGCCTGGGTATaGGGTGTCCTACTGATGTGGTGTGGCCCCGCAGTAGAGGGTGAT | + |
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Preference number: 1 (lower is better) Translates to: LPRGLVWRALLQAWV*GVLLMWCGPAVEGD Trigger: ATCACCCTCTACTGCGGGGCCACACCACATCAGTAGGACACCCCATACCCAGGCTTGGAGGAGTGCACGCCACACCAAGCCTCTGGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR GCA 90 bp | CATGCAGGTGTGGACACTGGCCCCTGGAAGAATGGGGTGTGTAGATaGCTGATCCAGCTGAGCTGGGCAGAGGTGACAGGGAATCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: HAGVDTGPWKNGVCR*LIQLSWAEVTGNLA Trigger: GGCCAGATTCCCTGTCACCTCTGCCCAGCTCAGCTGGATCAGGCATCTACACACCCCATTCTTCCAGGGGCCAGTGTCCACACCTGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 90 bp | AAGCAGGACACCGAATCCCTACATGCAGGTGTGGACACTGGCCCCTaGAAGAATGGGGTGTGTAGATGCCTGATCCAGCTGAGCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: KQDTESLHAGVDTGP*KNGVCRCLIQLSWA Trigger: TGCCCAGCTCAGCTGGATCAGGCATCTACACACCCCATTCTTCCAGGGGCCAGTGTCCACACCTGCATGTAGGGATTCGGTGTCCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR TCA 90 bp | AAGGCCAGACGTGGGCCTCCTGCAGCAAGCCCGAGTCCTGATTCTTaGCTTCAGTTGCCTGGAGGTCACTGTAAAGGGCCTCGCTTAGTA | + |
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Preference number: 1 (lower is better) Translates to: KARRGPPAASPSPDS*LQLPGGHCKGPRLV Trigger: TACTAAGCGAGGCCCTTTACAGTGACCTCCAGGCAACTGAAGTCAAGAATCAGGACTCGGGCTTGCTGCAGGAGGCCCACGTCTGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR TCA 90 bp | CTTCCCCTTGGCCTCGGGAACTCAAACCAGTCAAGCCGCACCCGCTaGAACACCATTCCTGCAGAGTTCATTTCAGTAACAGCAACTGTG | + |
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Preference number: 1 (lower is better) Translates to: LPLGLGNSNQSSRTR*NTIPAEFISVTATV Trigger: CACAGTTGCTGTTACTGAAATGAACTCTGCAGGAATGGTGTTTCAGCGGGTGCGGCTTGACTGGTTTGAGTTCCCGAGGCCAAGGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR GCA 90 bp | CGGGAACTCAAACCAGTCAAGCCGCACCCGCTGAAACACCATTCCTaGAGAGTTCATTTCAGTAACAGCAACTGTGAGTGTGACCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: RELKPVKPHPLKHHS*RVHFSNSNCECDPV Trigger: GACTGGGTCACACTCACAGTTGCTGTTACTGAAATGAACTCTGCAGGAATGGTGTTTCAGCGGGTGCGGCTTGACTGGTTTGAGTTCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 90 bp | CTGGCTGTACTTTTACCCAGCCAAAAGCACAGATACCATAGGACATaGGAAGAACTGTTAAGTATCGCTAGGGTCAGGGATCCTGACACC | + |
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Preference number: 1 (lower is better) Translates to: LAVLLPSQKHRYHRT*EELLSIARVRDPDT Trigger: GGTGTCAGGATCCCTGACCCTAGCGATACTTAACAGTTCTTCCCATGTCCTATGGTATCTGTGCTTTTGGCTGGGTAAAAGTACAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTCAGAAGTGTCCCACAGAAAAAGGCCAGACGTGGGCCTCCTGCAGCAAGGCACTCCTCCAAGCCTaGGTATGGGGTGTCCTACTG | + |
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Preference number: 2 (lower is better) Translates to: QGQKCPTEKGQTWASCSKALLQA*VWGVLL Trigger: CAGTAGGACACCCCATACCCAGGCTTGGAGGAGTGC...CTTGCTGCAGGAGGCCCACGTCTGGCCTTTTTCTGTGGGACACTTCTGACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGACGTGGGCCTCCTGCAGCAAGCCCGAGTCCTGATTCTTGACTTCAGTGCTAAAGCTTCCCCTTaGCCTCGGGAACTCAAACCA | + |
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Preference number: 2 (lower is better) Translates to: RPDVGLLQQARVLILDFSAKASP*PRELKP Trigger: TGGTTTGAGTTCCCGAGGCCAAGGGGAAGCTTTAGC...ACTGAAGTCAAGAATCAGGACTCGGGCTTGCTGCAGGAGGCCCACGTCTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR CCA 90 bp | GCAACTGTGAGTGTGACCCAGTCACACTCTCCTTGGGATAGAAAGAACCGGAGACTGATCCAGCTGAGCTaGGCAGAGGTGACAGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: ATVSVTQSHSPWDRKNRRLIQLS*AEVTGN Trigger: ATTCCCTGTCACCTCTGCCCAGCTCAGCTGGATCAG...TCTCCGGTTCTTTCTATCCCAAGGAGAGTGTGACTGGGTCACACTCACAGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CAA 90 bp | GCTAGGGTCAGGGATCCTGACACCTTGGTCAGCTACCAAACACTCTaGTTGCTACAGCAACCAGTTGCAAACAGAAATGACAGGTACAGG | + |
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Preference number: 2 (lower is better) Translates to: ARVRDPDTLVSYQTL*LLQQPVANRNDRYR Trigger: CCTGTACCTGTCATTTCTGTTTGCAACTGGTTGCTGTAGCAACAAGAGTGTTTGGTAGCTGACCAAGGTGTCAGGATCCCTGACCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR TCA 90 bp | CTGAACAGTAGTGAATGTTGTTTCCATTCTAAACCCAGTAAGCCGTCTCTGGCTTCTGCAGCAACTGCTTaGGGCCGGAGTGTCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LNSSECCFHSKPSKPSLASAATA*GRSVKV Trigger: GACCTTGACACTCCGGCCTCAAGCAGTTGCTGCAGA...AGCCAGAGACGGCTTACTGGGTTTAGAATGGAAACAACATTCACTACTGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR CCA 90 bp | CTGAACAGTAGTGAATGTTGTTTCCATTCTAAACCCAGTAAGCCGTCTCTGGCTCCCTACATGCAGGTGTaGACACTGGCCCCTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LNSSECCFHSKPSKPSLAPYMQV*TLAPGR Trigger: TCTTCCAGGGGCCAGTGTCCACACCTGCATGTAGGG...AGCCAGAGACGGCTTACTGGGTTTAGAATGGAAACAACATTCACTACTGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR GCA 90 bp | CAGCAACTGCTTGAGGCCGGAGTGTCAAGGTCAGAAGTGTCCCACAGAAAAAGGCTGAAACACCATTCCTaGAGAGTTCATTTCAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: QQLLEAGVSRSEVSHRKRLKHHS*RVHFSN Trigger: GTTACTGAAATGAACTCTGCAGGAATGGTGTTTCAG...CCTTTTTCTGTGGGACACTTCTGACCTTGACACTCCGGCCTCAAGCAGTTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGAAATGCTTCCAGCCTTTTCTTGTAACACTGACTACAAGATAAAAATCACCCACCGAATCCCTACATaGAGGTGTGGACACTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: VEMLPAFSCNTDYKIKITHRIPT*RCGHWP Trigger: GGGCCAGTGTCCACACCTGCATGTAGGGATTCGGTG...GGTGATTTTTATCTTGTAGTCAGTGTTACAAGAAAAGGCTGGAAGCATTTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR CCA 90 bp | GTAGAAATGCTTCCAGCCTTTTCTTGTAACACTGACTACAAGATAAAAATCACCTGCAGGTGTGGACACTaGCCCCTGGAAGAATGGGGT | + |
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Preference number: 2 (lower is better) Translates to: VEMLPAFSCNTDYKIKITCRCGH*PLEEWG Trigger: ACCCCATTCTTCCAGGGGCCAGTGTCCACACCTGCA...GGTGATTTTTATCTTGTAGTCAGTGTTACAAGAAAAGGCTGGAAGCATTTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR CCA 90 bp | CTGAACAGTAGTGAATGTTGTTTCCATTCTAAACCCAGTAAGCCGTCTCTGGCTCAGTCACACTCTCCTTaGGATAGAAAGAACCGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LNSSECCFHSKPSKPSLAQSHSP*DRKNRR Trigger: TCTCCGGTTCTTTCTATCCCAAGGAGAGTGTGACTG...AGCCAGAGACGGCTTACTGGGTTTAGAATGGAAACAACATTCACTACTGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR CCA 90 bp | CTGAACAGTAGTGAATGTTGTTTCCATTCTAAACCCAGTAAGCCGTCTCTGGCTGGAATCCCCCAACACTaGTTCAAAAGCAGAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LNSSECCFHSKPSKPSLAGIPQH*FKSRAK Trigger: CTTTGCTCTGCTTTTGAACCAGTGTTGGGGGATTCC...AGCCAGAGACGGCTTACTGGGTTTAGAATGGAAACAACATTCACTACTGTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR CCA 90 bp | GTAGAAATGCTTCCAGCCTTTTCTTGTAACACTGACTACAAGATAAAAATCACCCTCCAAGCCTGGGTATaGGGTGTCCTACTGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: VEMLPAFSCNTDYKIKITLQAWV*GVLLMW Trigger: CCACATCAGTAGGACACCCCATACCCAGGCTTGGAG...GGTGATTTTTATCTTGTAGTCAGTGTTACAAGAAAAGGCTGGAAGCATTTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR TCA 90 bp | AATTGCACTGTATTTTCCCAAACCATCTTAGGAGTTTCTAAGAGATTGTACCAGCCGAGTCCTGATTCTTaGCTTCAGTTGCCTGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: NCTVFSQTILGVSKRLYQPSPDS*LQLPGG Trigger: ACCTCCAGGCAACTGAAGTCAAGAATCAGGACTCGG...CTGGTACAATCTCTTAGAAACTCCTAAGATGGTTTGGGAAAATACAGTGCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CAA 90 bp | AATTGCACTGTATTTTCCCAAACCATCTTAGGAGTTTCTAAGAGATaGTACCAGCATGCACTGAACAGTAGTGAATGTTGTTTCCATTCT | + |
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Preference number: 2 (lower is better) Translates to: NCTVFSQTILGVSKR*YQHALNSSECCFHS Trigger: AGAATGGAAACAACATTCACTACTGTTCAGTGCATGCTGGTACAATCTCTTAGAAACTCCTAAGATGGTTTGGGAAAATACAGTGCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | GGCTTGGTGTGGCGTGCACTCCTCCAAGCCTGGGTATaGGGTGTCCTACTGATGTGGTGTGGCCCCGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: GLVWRALLQAWV*GVLLMWCGPAV Trigger: TACTGCGGGGCCACACCACATCAGTAGGACACCCCATACCCAGGCTTGGAGGAGTGCACGCCACACCAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR TCA 72 bp | CCCTTCACCCGCAGGTCAGCTGACAGCTGGGTGGAATaGAGCCCGAGAGGGGAAGGCATTAAGCAGGACACC | + |
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Preference number: 3 (lower is better) Translates to: PFTRRSADSWVE*SPRGEGIKQDT Trigger: GGTGTCCTGCTTAATGCCTTCCCCTCTCGGGCTTCATTCCACCCAGCTGTCAGCTGACCTGCGGGTGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR GCA 72 bp | GTGGACACTGGCCCCTGGAAGAATGGGGTGTGTAGATaGCTGATCCAGCTGAGCTGGGCAGAGGTGACAGGG | + |
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Preference number: 3 (lower is better) Translates to: VDTGPWKNGVCR*LIQLSWAEVTG Trigger: CCCTGTCACCTCTGCCCAGCTCAGCTGGATCAGGCATCTACACACCCCATTCTTCCAGGGGCCAGTGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | CTGAGCCCTTCACCCGCAGGTCAGCTGACAGCTGGGTaGAATGAAGCCCGAGAGGGGAAGGCATTAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LSPSPAGQLTAG*NEAREGKALSR Trigger: CCTGCTTAATGCCTTCCCCTCTCGGGCTTCATTCCACCCAGCTGTCAGCTGACCTGCGGGTGAAGGGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR-3UTR CAA 90 bp | CAAGGTCAGAAGTGTCCCACAGAAAAAGGCCAGACGTGGGCCTCCTGCAGCAAGATTCTACCCAGAGGCTaGGTGTGGCGTGCACTCCTC | + |
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Preference number: 3 (lower is better) Translates to: QGQKCPTEKGQTWASCSKILPRG*VWRALL Trigger: GAGGAGTGCACGCCACACCAAGCCTCTGGGTAGAAT...CTTGCTGCAGGAGGCCCACGTCTGGCCTTTTTCTGTGGGACACTTCTGACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | TTCAGGCCACATCAGATTCTACCCAGAGGCTTGGTGTaGCGTGCACTCCTCCAAGCCTGGGTATGGGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: FRPHQILPRGLV*RALLQAWVWGV Trigger: GACACCCCATACCCAGGCTTGGAGGAGTGCACGCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | ACCGAATCCCTACATGCAGGTGTGGACACTGGCCCCTaGAAGAATGGGGTGTGTAGATGCCTGATCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: TESLHAGVDTGP*KNGVCRCLIQL Trigger: CAGCTGGATCAGGCATCTACACACCCCATTCTTCCAGGGGCCAGTGTCCACACCTGCATGTAGGGATTCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | CTCCTCCAAGCCTGGGTATGGGGTGTCCTACTGATGTaGTGTGGCCCCGCAGTAGAGGGTGATGTCTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LLQAWVWGVLLM*CGPAVEGDVCF Trigger: AAAACAGACATCACCCTCTACTGCGGGGCCACACCACATCAGTAGGACACCCCATACCCAGGCTTGGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | GTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTTaGTGTGGCGTGCACTCCTCCAAGCCTGGGTATGGG | + |
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Preference number: 3 (lower is better) Translates to: VSSGHIRFYPEA*CGVHSSKPGYG Trigger: CCCATACCCAGGCTTGGAGGAGTGCACGCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | CTGGTTCAAAAGCAGAGCAAAGCTAAAGCTTCCCCTTaGCCTCGGGAACTCAAACCAGTCAAGCCGCACCCG | + |
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Preference number: 3 (lower is better) Translates to: LVQKQSKAKASP*PRELKPVKPHP Trigger: CGGGTGCGGCTTGACTGGTTTGAGTTCCCGAGGCCAAGGGGAAGCTTTAGCTTTGCTCTGCTTTTGAACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | GCATTAAGCAGGACACCGAATCCCTACATGCAGGTGTaGACACTGGCCCCTGGAAGAATGGGGTGTGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: ALSRTPNPYMQV*TLAPGRMGCVD Trigger: ATCTACACACCCCATTCTTCCAGGGGCCAGTGTCCACACCTGCATGTAGGGATTCGGTGTCCTGCTTAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR TCA 72 bp | GGCCTCGGGAACTCAAACCAGTCAAGCCGCACCCGCTaGAACACCATTCCTGCAGAGTTCATTTCAGTAACA | + |
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Preference number: 3 (lower is better) Translates to: GLGNSNQSSRTR*NTIPAEFISVT Trigger: TGTTACTGAAATGAACTCTGCAGGAATGGTGTTTCAGCGGGTGCGGCTTGACTGGTTTGAGTTCCCGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR TCA 72 bp | ATTAAATGCAAAAAGAACCACTCTGCAGCAACTGCTTaGGGCCGGAGTGTCAAGGTCAGAAGTGTCCCACAG | + |
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Preference number: 3 (lower is better) Translates to: IKCKKNHSAATA*GRSVKVRSVPQ Trigger: CTGTGGGACACTTCTGACCTTGACACTCCGGCCTCAAGCAGTTGCTGCAGAGTGGTTCTTTTTGCATTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR GCA 72 bp | AAACCAGTCAAGCCGCACCCGCTGAAACACCATTCCTaGAGAGTTCATTTCAGTAACAGCAACTGTGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: KPVKPHPLKHHS*RVHFSNSNCEC Trigger: ACACTCACAGTTGCTGTTACTGAAATGAACTCTGCAGGAATGGTGTTTCAGCGGGTGCGGCTTGACTGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | CTTTTACCCAGCCAAAAGCACAGATACCATAGGACATaGGAAGAACTGTTAAGTATCGCTAGGGTCAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LLPSQKHRYHRT*EELLSIARVRD Trigger: ATCCCTGACCCTAGCGATACTTAACAGTTCTTCCCATGTCCTATGGTATCTGTGCTTTTGGCTGGGTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CCA 72 bp | AATGTTGTTTCCATTCTAAACCCAGTAAGCCGTCTCTaGCTGTACTTTTACCCAGCCAAAAGCACAGATACC | + |
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Preference number: 3 (lower is better) Translates to: NVVSILNPVSRL*LYFYPAKSTDT Trigger: GGTATCTGTGCTTTTGGCTGGGTAAAAGTACAGCCAGAGACGGCTTACTGGGTTTAGAATGGAAACAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | CAGCAACTGCTTGAGGCCGGAGTGTCAAGGTCAGAAGTGTCCCACAGAAAAAGGCCGCTCCAGGAAGCCTaGCTGGGGCTCAGAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: QQLLEAGVSRSEVSHRKRPLQEA*LGLRSH Trigger: GTGACTTCTGAGCCCCAGCCAGGCTTCCTGGAGCGG...CCTTTTTCTGTGGGACACTTCTGACCTTGACACTCCGGCCTCAAGCAGTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | AGGCCAGACGTGGGCCTCCTGCAGCAAGCCCGAGTCCTGATTCTTGACTTCAGTCCTCCGTGTACTCACTaGACTCTTCTGTCTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: RPDVGLLQQARVLILDFSPPCTH*TLLSPP Trigger: GGGTGGAGACAGAAGAGTCCAGTGAGTACACGGAGG...ACTGAAGTCAAGAATCAGGACTCGGGCTTGCTGCAGGAGGCCCACGTCTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | CAAGGTCAGAAGTGTCCCACAGAAAAAGGCCAGACGTGGGCCTCCTGCAGCAAGCGAATGATGTCCACATaGGGGTCCTCCAGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QGQKCPTEKGQTWASCSKRMMST*GSSSLA Trigger: GGCCAAGCTGGAGGACCCCCATGTGGACATCATTCG...CTTGCTGCAGGAGGCCCACGTCTGGCCTTTTTCTGTGGGACACTTCTGACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR GCA 90 bp | AGGCCAGACGTGGGCCTCCTGCAGCAAGCCCGAGTCCTGATTCTTGACTTCAGTAGTTGGTCACCTCGTTaGCGGGCAATCACAGTAACC | + |
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Preference number: 4 (lower is better) Translates to: RPDVGLLQQARVLILDFSSWSPR*RAITVT Trigger: GGTTACTGTGATTGCCCGGCAACGAGGTGACCAACT...ACTGAAGTCAAGAATCAGGACTCGGGCTTGCTGCAGGAGGCCCACGTCTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | AGGCCAGACGTGGGCCTCCTGCAGCAAGCCCGAGTCCTGATTCTTGACTTCAGTAAGACTCCACTGCCATaGCACTGGGGTTTTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RPDVGLLQQARVLILDFSKTPLP*HWGFCG Trigger: GCCACAAAAACCCCAGTGCCATGGCAGTGGAGTCTT...ACTGAAGTCAAGAATCAGGACTCGGGCTTGCTGCAGGAGGCCCACGTCTGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CAA 72 bp | GGTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTaGGTGTGGCGTGCACTCCTCCAAGCCTGGGTATGG | + |
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Preference number: 4 (lower is better) Translates to: GFFRPHQILPRG*VWRALLQAWVW Trigger: CCATACCCAGGCTTGGAGGAGTGCACGCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR TCA 90 bp | AGGCCAGACGTGGGCCTCCTGCAGCAAGCCCGAGTCCTGATTCTTGACTTCAGTGCTCAGAAGTCACTTTaGCATGTTCTTTCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RPDVGLLQQARVLILDFSAQKSL*HVLSCC Trigger: GCAGCAGGAAAGAACATGTCAAAGTGACTTCTGAGC...ACTGAAGTCAAGAATCAGGACTCGGGCTTGCTGCAGGAGGCCCACGTCTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR GCA 90 bp | CAGCAACTGCTTGAGGCCGGAGTGTCAAGGTCAGAAGTGTCCCACAGAAAAAGGGAGAAGTCCCCATGGTaGAGGAGCAACAAGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: QQLLEAGVSRSEVSHRKREKSPW*RSNKVS Trigger: GGACACCTTGTTGCTCCTGCACCATGGGGACTTCTC...CCTTTTTCTGTGGGACACTTCTGACCTTGACACTCCGGCCTCAAGCAGTTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | CAGCAACTGCTTGAGGCCGGAGTGTCAAGGTCAGAAGTGTCCCACAGAAAAAGGTCCAGGAAGCCTGGCTaGGGCTCAGAAGTCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: QQLLEAGVSRSEVSHRKRSRKPG*GSEVTL Trigger: CAAAGTGACTTCTGAGCCCCAGCCAGGCTTCCTGGA...CCTTTTTCTGTGGGACACTTCTGACCTTGACACTCCGGCCTCAAGCAGTTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | TGGAAGAATGGGGTGTGTAGATGCCTGATCCAGCTGAGCTGGGCAGAGGTGACATCTGTCTCCACCCACTaGTACATCTCCACATGCCGT | + |
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Preference number: 4 (lower is better) Translates to: WKNGVCRCLIQLSWAEVTSVSTH*YISTCR Trigger: ACGGCATGTGGAGATGTACCAGTGGGTGGAGACAGA...TGTCACCTCTGCCCAGCTCAGCTGGATCAGGCATCTACACACCCCATTCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | TGGAAGAATGGGGTGTGTAGATGCCTGATCCAGCTGAGCTGGGCAGAGGTGACACCACTGCCATGGCACTaGGGTTTTTGTGGCCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: WKNGVCRCLIQLSWAEVTPLPWH*GFCGQS Trigger: AGATTGGCCACAAAAACCCCAGTGCCATGGCAGTGG...TGTCACCTCTGCCCAGCTCAGCTGGATCAGGCATCTACACACCCCATTCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR TCA 90 bp | CAAGGTCAGAAGTGTCCCACAGAAAAAGGCCAGACGTGGGCCTCCTGCAGCAAGCTCGGCCCTCGTTGGTaGAAATTAAGTAGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGQKCPTEKGQTWASCSKLGPRW*KLSRRR Trigger: TCTCCTTCTACTTAATTTTCACCAACGAGGGCCGAG...CTTGCTGCAGGAGGCCCACGTCTGGCCTTTTTCTGTGGGACACTTCTGACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR TCA 90 bp | GGGTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTTGGTGTGGCGTGCACTCTTTCAGGCCAATGTTaGCAAGGTCTCGGAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GFLQATSDSTQRLGVACTLSGQC*QGLGRQ Trigger: CTGTCTTCCGAGACCTTGTCAACATTGGCCTGAAAG...AGTGCACGCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | GGGTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTTGGTGTGGCGTGCACTGCACTGGGGTTTTTGTaGCCAATCTCTCGGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFLQATSDSTQRLGVACTALGFL*PISRSK Trigger: CTTTGACCGAGAGATTGGCCACAAAAACCCCAGTGC...AGTGCACGCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | CAGCAACTGCTTGAGGCCGGAGTGTCAAGGTCAGAAGTGTCCCACAGAAAAAGGAAAAACCTGCCAATCTaGACAAAGGGGGCGGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQLLEAGVSRSEVSHRKRKNLPI*TKGAVA Trigger: AGCGACCGCCCCCTTTGTCCAGATTGGCAGGTTTTT...CCTTTTTCTGTGGGACACTTCTGACCTTGACACTCCGGCCTCAAGCAGTTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR TCA 90 bp | AGGCCAGACGTGGGCCTCCTGCAGCAAGCCCGAGTCCTGATTCTTGACTTCAGTCAAAGTTTCTGCTGTTaGCAATTTCTGACCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RPDVGLLQQARVLILDFSQSFCC*QFLTST Trigger: AGTGGAGGTCAGAAATTGTCAACAGCAGAAACTTTG...ACTGAAGTCAAGAATCAGGACTCGGGCTTGCTGCAGGAGGCCCACGTCTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR TCA 90 bp | ACCTTCAGGGTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTTGGTGTGGCCCAGGCTCAGGGCCTTaGAGTTGTCAATCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TFRVSSGHIRFYPEAWCGPGSGP*SCQSCQ Trigger: TTGACAAGATTGACAACTTCAAGGCCCTGAGCCTGG...GCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAACCCTGAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR TCA 90 bp | GGGTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTTGGTGTGGCGTGCACTGCTGTTGACAATTTCTaGCCTCCACTCTGTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GFLQATSDSTQRLGVACTAVDNF*PPLCVV Trigger: TACAACACAGAGTGGAGGTCAGAAATTGTCAACAGC...AGTGCACGCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR GCA 90 bp | GCAACTGTGAGTGTGACCCAGTCACACTCTCCTTGGGATAGAAAGAACCGGAGATGGTACATCTCCACATaGCGTCGCAGTTTCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATVSVTQSHSPWDRKNRRWYIST*RRSFTA Trigger: AGCTGTGAAACTGCGACGGCATGTGGAGATGTACCA...TCTCCGGTTCTTTCTATCCCAAGGAGAGTGTGACTGGGTCACACTCACAGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | ACCTTCAGGGTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTTGGTGTGGCGGCCCCATGTCTTCATaGAATTGCTCTTCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFRVSSGHIRFYPEAWCGGPMSS*NCSSVL Trigger: GAGAACAGAAGAGCAATTCCATGAAGACATGGGGCC...GCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAACCCTGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR GCA 90 bp | CAGCAACTGCTTGAGGCCGGAGTGTCAAGGTCAGAAGTGTCCCACAGAAAAAGGCATGTTCTTTCCTGCTaGTGGTACTGGAATAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QQLLEAGVSRSEVSHRKRHVLSC*WYWNSS Trigger: CGAACTATTCCAGTACCAGCAGCAGGAAAGAACATG...CCTTTTTCTGTGGGACACTTCTGACCTTGACACTCCGGCCTCAAGCAGTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR GCA 90 bp | AACCCAGTAAGCCGTCTCTGGCTGTACTTTTACCCAGCCAAAAGCACAGATACCTGTGAAAGACTCCACTaGCATGGCACTGGGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NPVSRLWLYFYPAKSTDTCERLH*HGTGVF Trigger: AAAAACCCCAGTGCCATGGCAGTGGAGTCTTTCACA...GGTATCTGTGCTTTTGGCTGGGTAAAAGTACAGCCAGAGACGGCTTACTGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | CTGAACAGTAGTGAATGTTGTTTCCATTCTAAACCCAGTAAGCCGTCTCTGGCTGCTGAGAAGTCCCCATaGTGCAGGAGCAACAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNSSECCFHSKPSKPSLAAEKSP*CRSNKV Trigger: CACCTTGTTGCTCCTGCACCATGGGGACTTCTCAGC...AGCCAGAGACGGCTTACTGGGTTTAGAATGGAAACAACATTCACTACTGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CAA 72 bp | CTGTTAAGTATCGCTAGGGTCAGGGATCCTGACACCTaGGTCAGCTACCAAACACTCTTGTTGCTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSIARVRDPDT*VSYQTLLLLQQ Trigger: TTGCTGTAGCAACAAGAGTGTTTGGTAGCTGACCAAGGTGTCAGGATCCCTGACCCTAGCGATACTTAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
||
| CDS-3UTR TCA 90 bp | GCAACTGTGAGTGTGACCCAGTCACACTCTCCTTGGGATAGAAAGAACCGGAGATGTCAATCTTGTCAATaGGGCCTGCTGAGAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ATVSVTQSHSPWDRKNRRCQSCQ*GLLREK Trigger: TTTTTCTCTCAGCAGGCCTCATTGACAAGATTGACA...TCTCCGGTTCTTTCTATCCCAAGGAGAGTGTGACTGGGTCACACTCACAGTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR GCA 90 bp | CTGAACAGTAGTGAATGTTGTTTCCATTCTAAACCCAGTAAGCCGTCTCTGGCTGGTCAGGGTCATCGCTaGTCAGTCCCGCATAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNSSECCFHSKPSKPSLAGQGHR*SVPHKK Trigger: TTTCTTATGCGGGACTGAGCAGCGATGACCCTGACC...AGCCAGAGACGGCTTACTGGGTTTAGAATGGAAACAACATTCACTACTGTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR GCA 90 bp | GCAACTGTGAGTGTGACCCAGTCACACTCTCCTTGGGATAGAAAGAACCGGAGAATGTCTTCATGGAATTaGTCTTCTGTTCTCTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATVSVTQSHSPWDRKNRRMSSWN*SSVLYE Trigger: TTCGTAGAGAACAGAAGAGCAATTCCATGAAGACAT...TCTCCGGTTCTTTCTATCCCAAGGAGAGTGTGACTGGGTCACACTCACAGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CCA 90 bp | CTGAACAGTAGTGAATGTTGTTTCCATTCTAAACCCAGTAAGCCGTCTCTGGCTATGGACCCCATAATTTaGGTCAGACAAGAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNSSECCFHSKPSKPSLAMDPII*VRQELG Trigger: TCCAAGCTCTTGTCTGACCCAAATTATGGGGTCCAT...AGCCAGAGACGGCTTACTGGGTTTAGAATGGAAACAACATTCACTACTGTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| 3UTR CAA 72 bp | GTATTTTCCCAAACCATCTTAGGAGTTTCTAAGAGATaGTACCAGCATGCACTGAACAGTAGTGAATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFSQTILGVSKR*YQHALNSSECC Trigger: ACAACATTCACTACTGTTCAGTGCATGCTGGTACAATCTCTTAGAAACTCCTAAGATGGTTTGGGAAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS TCA 90 bp | ATTCTCCGGAGCTACACTATGGATGCTGTCAGGGGACACCACGAGTaGCAGCCCCTCTGCAAGCGATGTGGCTGTCTTCAGTGCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILRSYTMDAVRGHHE*QPLCKRCGCLQCSA Trigger: GGCCGAGCACTGAAGACAGCCACATCGCTTGCAGAGGGGCTGTCACTCGTGGTGTCCCCTGACAGCATCCATAGTGTAGCTCCGGAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 90 bp | CACGAACATCCCGCCCGAAGTCTCACTCAGCCGCTCCAGGAAGCCTaGCTGGGGCTCAGAAGTCACTTTGACATGTTCTTTCCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HEHPARSLTQPLQEA*LGLRSHFDMFFPAA Trigger: AGCAGCAGGAAAGAACATGTCAAAGTGACTTCTGAGCCCCAGCCAGGCTTCCTGGAGCGGCTGAGTGAGACTTCGGGCGGGATGTTCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS GCA 90 bp | TGGCCATCCATCCAGCCGCCCGCAGGCCCCATGTCTTCATGGAATTaGTCTTCTGTTCTCTACGAAACACCTCCTCAGCTGAGAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WPSIQPPAGPMSSWN*SSVLYETPPQLRSP Trigger: GGGACTTCTCAGCTGAGGAGGTGTTTCGTAGAGAACAGAAGAGCAATTCCATGAAGACATGGGGCCTGCGGGCGGCTGGATGGATGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 90 bp | AACATCCCGCCCGAAGTCTCACTCAGCCGCTCCAGGAAGCCTGGCTaGGGCTCAGAAGTCACTTTGACATGTTCTTTCCTGCTGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: NIPPEVSLSRSRKPG*GSEVTLTCSFLLLV Trigger: TACCAGCAGCAGGAAAGAACATGTCAAAGTGACTTCTGAGCCCCAGCCAGGCTTCCTGGAGCGGCTGAGTGAGACTTCGGGCGGGATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS TCA 90 bp | CACTCAGCCGCTCCAGGAAGCCTGGCTGGGGCTCAGAAGTCACTTTaGCATGTTCTTTCCTGCTGCTGGTACTGGAATAGTTCGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSAAPGSLAGAQKSL*HVLSCCWYWNSSLP Trigger: TGGCAGCGAACTATTCCAGTACCAGCAGCAGGAAAGAACATGTCAAAGTGACTTCTGAGCCCCAGCCAGGCTTCCTGGAGCGGCTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 90 bp | TGTCCGTCCTCCGTGTACTCACTGGACTCTTCTGTCTCCACCCACTaGTACATCTCCACATGCCGTCGCAGTTTCACAGCTGGTAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: CPSSVYSLDSSVSTH*YISTCRRSFTAGRW Trigger: CCATCTACCAGCTGTGAAACTGCGACGGCATGTGGAGATGTACCAGTGGGTGGAGACAGAAGAGTCCAGTGAGTACACGGAGGACGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 90 bp | AGAAGTCCCCATGGTGCAGGAGCAACAAGGTGTCCCCGGACTTGGTaGAATATGGGATTAGTTGGTCACCTCGTTGCCGGGCAATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RSPHGAGATRCPRTW*NMGLVGHLVAGQSQ Trigger: CTGTGATTGCCCGGCAACGAGGTGACCAACTAATCCCATATTCCACCAAGTCCGGGGACACCTTGTTGCTCCTGCACCATGGGGACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 90 bp | CTGAGAAGTCCCCATGGTGCAGGAGCAACAAGGTGTCCCCGGACTTaGTGGAATATGGGATTAGTTGGTCACCTCGTTGCCGGGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LRSPHGAGATRCPRT*WNMGLVGHLVAGQS Trigger: TGATTGCCCGGCAACGAGGTGACCAACTAATCCCATATTCCACCAAGTCCGGGGACACCTTGTTGCTCCTGCACCATGGGGACTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 90 bp | CCGATTATGTGTACCAGTCTTCCTTCATTCTCCGGAGCTACACTATaGATGCTGTCAGGGGACACCACGAGTGACAGCCCCTCTGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PIMCTSLPSFSGATL*MLSGDTTSDSPSAS Trigger: GCTTGCAGAGGGGCTGTCACTCGTGGTGTCCCCTGACAGCATCCATAGTGTAGCTCCGGAGAATGAAGGAAGACTGGTACACATAATCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 90 bp | CTCTTCTGTTCTCTACGAAACACCTCCTCAGCTGAGAAGTCCCCATaGTGCAGGAGCAACAAGGTGTCCCCGGACTTGGTGGAATATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFCSLRNTSSAEKSP*CRSNKVSPDLVEYG Trigger: CCCATATTCCACCAAGTCCGGGGACACCTTGTTGCTCCTGCACCATGGGGACTTCTCAGCTGAGGAGGTGTTTCGTAGAGAACAGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CAA 90 bp | TGGAAGAATGGGGTGTGTAGATGCCTGATCCAGCTGAGCTGGGCAGAGGTGACAGCCAGGCTCAGGGCCTaGAAGTTGTCAATCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WKNGVCRCLIQLSWAEVTARLRA*KLSILS Trigger: TGACAAGATTGACAACTTCAAGGCCCTGAGCCTGGC...TGTCACCTCTGCCCAGCTCAGCTGGATCAGGCATCTACACACCCCATTCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CAA 90 bp | TGGAAGAATGGGGTGTGTAGATGCCTGATCCAGCTGAGCTGGGCAGAGGTGACAATCCGTGTCATGAGGTaGAGGCCCATAAACATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WKNGVCRCLIQLSWAEVTIRVMR*RPINMA Trigger: GGCCATGTTTATGGGCCTCAACCTCATGACACGGAT...TGTCACCTCTGCCCAGCTCAGCTGGATCAGGCATCTACACACCCCATTCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS GCA 90 bp | TTATGTGTACCAGTCTTCCTTCATTCTCCGGAGCTACACTATGGATaGTGTCAGGGGACACCACGAGTGACAGCCCCTCTGCAAGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LCVPVFLHSPELHYG*CQGTPRVTAPLQAM Trigger: CATCGCTTGCAGAGGGGCTGTCACTCGTGGTGTCCCCTGACAGCATCCATAGTGTAGCTCCGGAGAATGAAGGAAGACTGGTACACATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CAA 90 bp | AGGCCAGACGTGGGCCTCCTGCAGCAAGCCCGAGTCCTGATTCTTGACTTCAGTTGTTGTAGGAGTACTTaGTCTCCTTCTTCACCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPDVGLLQQARVLILDFSCCRST*SPSSPV Trigger: GACAGGTGAAGAAGGAGACAAAGTACTCCTACAACA...ACTGAAGTCAAGAATCAGGACTCGGGCTTGCTGCAGGAGGCCCACGTCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CAA 90 bp | ACCTTCAGGGTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTTGGTGTGGCATGGCACTGGGGTTTTaGTGGCCAATCTCTCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TFRVSSGHIRFYPEAWCGMALGF*WPISRS Trigger: TGACCGAGAGATTGGCCACAAAAACCCCAGTGCCAT...GCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAACCCTGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS TCA 90 bp | TCAGGGAAGTGGCCACACAGAAGGCAAAGGCTTTCAGGCCAATGTTaGCAAGGTCTCGGAAGACAGGAAACCAGTCCACTAGGGTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGKWPHRRQRLSGQC*QGLGRQETSPLGCR Trigger: TCTACACCCTAGTGGACTGGTTTCCTGTCTTCCGAGACCTTGTCAACATTGGCCTGAAAGCCTTTGCCTTCTGTGTGGCCACTTCCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS GCA 90 bp | TTCTGTTCTCTACGAAACACCTCCTCAGCTGAGAAGTCCCCATGGTaGAGGAGCAACAAGGTGTCCCCGGACTTGGTGGAATATGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: FCSLRNTSSAEKSPW*RSNKVSPDLVEYGI Trigger: AATCCCATATTCCACCAAGTCCGGGGACACCTTGTTGCTCCTGCACCATGGGGACTTCTCAGCTGAGGAGGTGTTTCGTAGAGAACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CAA 90 bp | CAGCAACTGCTTGAGGCCGGAGTGTCAAGGTCAGAAGTGTCCCACAGAAAAAGGGATGGACCCCATAATTaGGGTCAGACAAGAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QQLLEAGVSRSEVSHRKRDGPHN*GQTRAW Trigger: CCAAGCTCTTGTCTGACCCAAATTATGGGGTCCATC...CCTTTTTCTGTGGGACACTTCTGACCTTGACACTCCGGCCTCAAGCAGTTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CAA 90 bp | CAGCAACTGCTTGAGGCCGGAGTGTCAAGGTCAGAAGTGTCCCACAGAAAAAGGGCTTTCAGGCCAATGTaGACAAGGTCTCGGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: QQLLEAGVSRSEVSHRKRAFRPM*TRSRKT Trigger: TGTCTTCCGAGACCTTGTCAACATTGGCCTGAAAGC...CCTTTTTCTGTGGGACACTTCTGACCTTGACACTCCGGCCTCAAGCAGTTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS TCA 90 bp | CCTCTGCAAGCGATGTGGCTGTCTTCAGTGCTCGGCCCTCGTTGGTaGAAATTAAGTAGAAGGAGAGTAAGAAGGTCATTAGCCCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: PLQAMWLSSVLGPRW*KLSRRRVRRSLAPR Trigger: TCGTGGGGCTAATGACCTTCTTACTCTCCTTCTACTTAATTTTCACCAACGAGGGCCGAGCACTGAAGACAGCCACATCGCTTGCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 90 bp | TCACAGCTGGTAGATGGACCCCATAATTTGGGTCAGACAAGAGCTTaGAAGTCCGCAGGGCCCCGATTATGTGTACCAGTCTTCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQLVDGPHNLGQTRA*KSAGPRLCVPVFLH Trigger: ATGAAGGAAGACTGGTACACATAATCGGGGCCCTGCGGACTTCCAAGCTCTTGTCTGACCCAAATTATGGGGTCCATCTACCAGCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CAA 90 bp | TGGAAGAATGGGGTGTGTAGATGCCTGATCCAGCTGAGCTGGGCAGAGGTGACATCAAAGTTTCTGCTGTaGACAATTTCTGACCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WKNGVCRCLIQLSWAEVTSKFLL*TISDLH Trigger: GTGGAGGTCAGAAATTGTCAACAGCAGAAACTTTGA...TGTCACCTCTGCCCAGCTCAGCTGGATCAGGCATCTACACACCCCATTCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS-3UTR CAA 90 bp | ACCTTCAGGGTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTTGGTGTGGCTTGAAGTTGTCAATCTaGTCAATGAGGCCTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TFRVSSGHIRFYPEAWCGLKLSI*SMRPAE Trigger: CTCAGCAGGCCTCATTGACAAGATTGACAACTTCAA...GCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAACCCTGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCTTCAGGCCACATCAGATTCTACCCAGAGGCTTGGTGTGGCGTGCACTCATGTCTTCATGGAATaGCTCTTCTGTTCTCTACGA | + |
|
Preference number: 5 (lower is better) Translates to: GFLQATSDSTQRLGVACTHVFME*LFCSLR Trigger: TCGTAGAGAACAGAAGAGCAATTCCATGAAGACATG...AGTGCACGCCACACCAAGCCTCTGGGTAGAATCTGATGTGGCCTGAAGAAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS TCA 90 bp | CACTGGGGTTTTTGTGGCCAATCTCTCGGTCAAAGTTTCTGCTGTTaGCAATTTCTGACCTCCACTCTGTGTTGTAGGAGTACTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HWGFCGQSLGQSFCC*QFLTSTLCCRSTLS Trigger: AGACAAAGTACTCCTACAACACAGAGTGGAGGTCAGAAATTGTCAACAGCAGAAACTTTGACCGAGAGATTGGCCACAAAAACCCCAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
||
| CDS TCA 90 bp | TTTGTGGCCAATCTCTCGGTCAAAGTTTCTGCTGTTGACAATTTCTaGCCTCCACTCTGTGTTGTAGGAGTACTTTGTCTCCTTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FVANLSVKVSAVDNF*PPLCVVGVLCLLLH Trigger: GTGAAGAAGGAGACAAAGTACTCCTACAACACAGAGTGGAGGTCAGAAATTGTCAACAGCAGAAACTTTGACCGAGAGATTGGCCACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
||
| CDS-3UTR CAA 90 bp | AATTGCACTGTATTTTCCCAAACCATCTTAGGAGTTTCTAAGAGATTGTACCAGGGCTCAGAAGTCACTTaGACATGTTCTTTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NCTVFSQTILGVSKRLYQGSEVT*TCSFLL Trigger: CAGCAGGAAAGAACATGTCAAAGTGACTTCTGAGCC...CTGGTACAATCTCTTAGAAACTCCTAAGATGGTTTGGGAAAATACAGTGCAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
||
| CDS CCA 72 bp | CCCGCCCGAAGTCTCACTCAGCCGCTCCAGGAAGCCTaGCTGGGGCTCAGAAGTCACTTTGACATGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PARSLTQPLQEA*LGLRSHFDMFF Trigger: AAAGAACATGTCAAAGTGACTTCTGAGCCCCAGCCAGGCTTCCTGGAGCGGCTGAGTGAGACTTCGGGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CAA 90 bp | GCTGAGAAGTCCCCATGGTGCAGGAGCAACAAGGTGTCCCCGGACTaGGTGGAATATGGGATTAGTTGGTCACCTCGTTGCCGGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: AEKSPWCRSNKVSPD*VEYGISWSPRCRAI Trigger: GATTGCCCGGCAACGAGGTGACCAACTAATCCCATATTCCACCAAGTCCGGGGACACCTTGTTGCTCCTGCACCATGGGGACTTCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS TCA 72 bp | AGCTACACTATGGATGCTGTCAGGGGACACCACGAGTaGCAGCCCCTCTGCAAGCGATGTGGCTGTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SYTMDAVRGHHE*QPLCKRCGCLQ Trigger: CTGAAGACAGCCACATCGCTTGCAGAGGGGCTGTCACTCGTGGTGTCCCCTGACAGCATCCATAGTGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS GCA 72 bp | CCAGTCTTCCTTCATTCTCCGGAGCTACACTATGGATaGTGTCAGGGGACACCACGAGTGACAGCCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PVFLHSPELHYG*CQGTPRVTAPL Trigger: CAGAGGGGCTGTCACTCGTGGTGTCCCCTGACAGCATCCATAGTGTAGCTCCGGAGAATGAAGGAAGACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 72 bp | CCCGAAGTCTCACTCAGCCGCTCCAGGAAGCCTGGCTaGGGCTCAGAAGTCACTTTGACATGTTCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PEVSLSRSRKPG*GSEVTLTCSFL Trigger: CAGGAAAGAACATGTCAAAGTGACTTCTGAGCCCCAGCCAGGCTTCCTGGAGCGGCTGAGTGAGACTTCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 72 bp | CATGGTGCAGGAGCAACAAGGTGTCCCCGGACTTGGTaGAATATGGGATTAGTTGGTCACCTCGTTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: HGAGATRCPRTW*NMGLVGHLVAG Trigger: CCCGGCAACGAGGTGACCAACTAATCCCATATTCCACCAAGTCCGGGGACACCTTGTTGCTCCTGCACCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 72 bp | CCCCATGGTGCAGGAGCAACAAGGTGTCCCCGGACTTaGTGGAATATGGGATTAGTTGGTCACCTCGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: PHGAGATRCPRT*WNMGLVGHLVA Trigger: GGCAACGAGGTGACCAACTAATCCCATATTCCACCAAGTCCGGGGACACCTTGTTGCTCCTGCACCATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 72 bp | TCTCTACGAAACACCTCCTCAGCTGAGAAGTCCCCATaGTGCAGGAGCAACAAGGTGTCCCCGGACTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SLRNTSSAEKSP*CRSNKVSPDLV Trigger: CACCAAGTCCGGGGACACCTTGTTGCTCCTGCACCATGGGGACTTCTCAGCTGAGGAGGTGTTTCGTAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CAA 90 bp | ATGGCCATCCATCCAGCCGCCCGCAGGCCCCATGTCTTCATGGAATaGCTCTTCTGTTCTCTACGAAACACCTCCTCAGCTGAGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: MAIHPAARRPHVFME*LFCSLRNTSSAEKS Trigger: GGACTTCTCAGCTGAGGAGGTGTTTCGTAGAGAACAGAAGAGCAATTCCATGAAGACATGGGGCCTGCGGGCGGCTGGATGGATGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS GCA 72 bp | GACTCTTCTGTCTCCACCCACTGGTACATCTCCACATaGCGTCGCAGTTTCACAGCTGGTAGATGGACCCCA | + |
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Preference number: 6 (lower is better) Translates to: DSSVSTHWYIST*RRSFTAGRWTP Trigger: TGGGGTCCATCTACCAGCTGTGAAACTGCGACGGCATGTGGAGATGTACCAGTGGGTGGAGACAGAAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS GCA 72 bp | ATCCAGCCGCCCGCAGGCCCCATGTCTTCATGGAATTaGTCTTCTGTTCTCTACGAAACACCTCCTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: IQPPAGPMSSWN*SSVLYETPPQL Trigger: CAGCTGAGGAGGTGTTTCGTAGAGAACAGAAGAGCAATTCCATGAAGACATGGGGCCTGCGGGCGGCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 72 bp | TGTACCAGTCTTCCTTCATTCTCCGGAGCTACACTATaGATGCTGTCAGGGGACACCACGAGTGACAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CTSLPSFSGATL*MLSGDTTSDSP Trigger: GGGGCTGTCACTCGTGGTGTCCCCTGACAGCATCCATAGTGTAGCTCCGGAGAATGAAGGAAGACTGGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CAA 72 bp | GTCGCAGTTTCACAGCTGGTAGATGGACCCCATAATTaGGGTCAGACAAGAGCTTGGAAGTCCGCAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VAVSQLVDGPHN*GQTRAWKSAGP Trigger: GGGCCCTGCGGACTTCCAAGCTCTTGTCTGACCCAAATTATGGGGTCCATCTACCAGCTGTGAAACTGCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CAA 72 bp | TCCCCATGGTGCAGGAGCAACAAGGTGTCCCCGGACTaGGTGGAATATGGGATTAGTTGGTCACCTCGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SPWCRSNKVSPD*VEYGISWSPRC Trigger: GCAACGAGGTGACCAACTAATCCCATATTCCACCAAGTCCGGGGACACCTTGTTGCTCCTGCACCATGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CAA 72 bp | CATCCAGCCGCCCGCAGGCCCCATGTCTTCATGGAATaGCTCTTCTGTTCTCTACGAAACACCTCCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HPAARRPHVFME*LFCSLRNTSSA Trigger: AGCTGAGGAGGTGTTTCGTAGAGAACAGAAGAGCAATTCCATGAAGACATGGGGCCTGCGGGCGGCTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CAA 90 bp | CCACATGCCGTCGCAGTTTCACAGCTGGTAGATGGACCCCATAATTaGGGTCAGACAAGAGCTTGGAAGTCCGCAGGGCCCCGATTATGT | + |
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Preference number: 6 (lower is better) Translates to: PHAVAVSQLVDGPHN*GQTRAWKSAGPRLC Trigger: ACATAATCGGGGCCCTGCGGACTTCCAAGCTCTTGTCTGACCCAAATTATGGGGTCCATCTACCAGCTGTGAAACTGCGACGGCATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 72 bp | AAGGTGTCCCCGGACTTGGTGGAATATGGGATTAGTTaGTCACCTCGTTGCCGGGCAATCACAGTAACCACG | + |
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Preference number: 6 (lower is better) Translates to: KVSPDLVEYGIS*SPRCRAITVTT Trigger: CGTGGTTACTGTGATTGCCCGGCAACGAGGTGACCAACTAATCCCATATTCCACCAAGTCCGGGGACACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS TCA 72 bp | GCTCCAGGAAGCCTGGCTGGGGCTCAGAAGTCACTTTaGCATGTTCTTTCCTGCTGCTGGTACTGGAATAGT | + |
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Preference number: 6 (lower is better) Translates to: APGSLAGAQKSL*HVLSCCWYWNS Trigger: ACTATTCCAGTACCAGCAGCAGGAAAGAACATGTCAAAGTGACTTCTGAGCCCCAGCCAGGCTTCCTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CCA 72 bp | GTAGATGGACCCCATAATTTGGGTCAGACAAGAGCTTaGAAGTCCGCAGGGCCCCGATTATGTGTACCAGTC | + |
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Preference number: 6 (lower is better) Translates to: VDGPHNLGQTRA*KSAGPRLCVPV Trigger: GACTGGTACACATAATCGGGGCCCTGCGGACTTCCAAGCTCTTGTCTGACCCAAATTATGGGGTCCATCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CAA 72 bp | GTGGCCACACAGAAGGCAAAGGCTTTCAGGCCAATGTaGACAAGGTCTCGGAAGACAGGAAACCAGTCCACT | + |
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Preference number: 6 (lower is better) Translates to: VATQKAKAFRPM*TRSRKTGNQST Trigger: AGTGGACTGGTTTCCTGTCTTCCGAGACCTTGTCAACATTGGCCTGAAAGCCTTTGCCTTCTGTGTGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS TCA 72 bp | TGGCCACACAGAAGGCAAAGGCTTTCAGGCCAATGTTaGCAAGGTCTCGGAAGACAGGAAACCAGTCCACTA | + |
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Preference number: 6 (lower is better) Translates to: WPHRRQRLSGQC*QGLGRQETSPL Trigger: TAGTGGACTGGTTTCCTGTCTTCCGAGACCTTGTCAACATTGGCCTGAAAGCCTTTGCCTTCTGTGTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS CAA 72 bp | CAATTTCTGACCTCCACTCTGTGTTGTAGGAGTACTTaGTCTCCTTCTTCACCTGTCCGTCCTCCGTGTACT | + |
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Preference number: 6 (lower is better) Translates to: QFLTSTLCCRST*SPSSPVRPPCT Trigger: AGTACACGGAGGACGGACAGGTGAAGAAGGAGACAAAGTACTCCTACAACACAGAGTGGAGGTCAGAAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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| CDS TCA 72 bp | TTTTGTGGCCAATCTCTCGGTCAAAGTTTCTGCTGTTaGCAATTTCTGACCTCCACTCTGTGTTGTAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: FCGQSLGQSFCC*QFLTSTLCCRS Trigger: ACTCCTACAACACAGAGTGGAGGTCAGAAATTGTCAACAGCAGAAACTTTGACCGAGAGATTGGCCACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032183.6 |
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