Pregenerated sensors for TMEM42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066233Ensembl transcript IDs: ENSMUST00000084733.7, ENSMUST00000213514.2, ENSMUST00000214785.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGTGAGGAGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTaGCTGACACTTAAGGGCTGCACTCCCAGGCCGCCCTGGAAGCAG | + |
|
Preference number: 1 (lower is better) Translates to: AVRRSEASGWSTISM*LTLKGCTPRPPWKQ Trigger: CTGCTTCCAGGGCGGCCTGGGAGTGCAGCCCTTAAGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCTCCTCACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR GCA 90 bp | GCCAGTGGCTGGTCCACCATCTCCATGTGGCTGACACTTAAGGGCTaGACTCCCAGGCCGCCCTGGAAGCAGCCCAACTTGTCAACCCTT | + |
|
Preference number: 1 (lower is better) Translates to: ASGWSTISMWLTLKG*TPRPPWKQPNLSTL Trigger: AAGGGTTGACAAGTTGGGCTGCTTCCAGGGCGGCCTGGGAGTGCAGCCCTTAAGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR TCA 90 bp | AGCAGTGGATCTGTGTCGGCAAGCTCTTCCTGTCACCTGTCCAGATaGATATGGAGAAAATCTCCATTTGTACTCACTACCCCACTACCC | + |
|
Preference number: 1 (lower is better) Translates to: SSGSVSASSSCHLSR*IWRKSPFVLTTPLP Trigger: GGGTAGTGGGGTAGTGAGTACAAATGGAGATTTTCTCCATATTCATCTGGACAGGTGACAGGAAGAGCTTGCCGACACAGATCCACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| 3UTR TCA 90 bp | AGGGGGCAGGGTTATCTTCCACGAAGACCTCAAATTTCTTGTAGCTaGGTAGCCTTCTGGAAAGATATGACTTTACAAAAGGACTGTAAG | + |
|
Preference number: 1 (lower is better) Translates to: RGQGYLPRRPQISCS*VAFWKDMTLQKDCK Trigger: CTTACAGTCCTTTTGTAAAGTCATATCTTTCCAGAAGGCTACTCAGCTACAAGAAATTTGAGGTCTTCGTGGAAGATAACCCTGCCCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| 3UTR CAA 90 bp | TTGGCGCTTGCCATGGCAACGATGCCTAAGACACATAAGCCAATATaGACCCTGACTGATAGGCAGAGGAATTTGCCTGCAGACAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LALAMATMPKTHKPI*TLTDRQRNLPADRG Trigger: CCCCCTGTCTGCAGGCAAATTCCTCTGCCTATCAGTCAGGGTCAATATTGGCTTATGTGTCTTAGGCATCGTTGCCATGGCAAGCGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAGGAGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTGGCTGACACTTTGTCAACCCTTGGCTaGGTATCATGGTTCTCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: CEEVRGQWLVHHLHVADTLSTLG*VSWFSL Trigger: TAAAGAGAACCATGATACCCAGCCAAGGGTTGACAA...AGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCTCCTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR-3UTR CCA 90 bp | CACAAGAATCAAGGCACTATACCAACACTGAAGGACTTGGGCCTCATACTGTGGTCTTTACAGTGGGTCTaGTCTATCCACCGACTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HKNQGTIPTLKDLGLILWSLQWV*SIHRLA Trigger: GGCCAGTCGGTGGATAGACCAGACCCACTGTAAAGA...CCACAGTATGAGGCCCAAGTCCTTCAGTGTTGGTATAGTGCCTTGATTCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR CAA 90 bp | AAGACACATAAGCCAATATTGACCCTGACTGATAGGCAGAGGAATTaGCCTGCAGACAGGGGGCAGGGTTATCTTCCACGAAGACCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: KTHKPILTLTDRQRN*PADRGQGYLPRRPQ Trigger: TTGAGGTCTTCGTGGAAGATAACCCTGCCCCCTGTCTGCAGGCAAATTCCTCTGCCTATCAGTCAGGGTCAATATTGGCTTATGTGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGTCTTCCAATATTCCCTGGTGCACAAGAATCAAGGCACTATACCAACACTCCATCTCCATGTGGCTaGCACTTAAGGGCTGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: QSLPIFPGAQESRHYTNTPSPCG*HLRAAL Trigger: GAGTGCAGCCCTTAAGTGTCAGCCACATGGAGATGG...AGTGTTGGTATAGTGCCTTGATTCTTGTGCACCAGGGAATATTGGAAGACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCCCCGGCTAAAGAAGGTCCACATCAGAGAATTGGCGCTTGCCATGGCAACCCTTCTGGAAAGATATaGCTTTACAAAAGGACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: EAPAKEGPHQRIGACHGNPSGKI*LYKRTV Trigger: TACAGTCCTTTTGTAAAGTCATATCTTTCCAGAAGG...GTTGCCATGGCAAGCGCCAATTCTCTGATGTGGACCTTCTTTAGCCGGGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGTCCACATCAGAGAATTGGCGCTTGCCATGGCAACGATGCCTAAGACACATACAAATTTCTTGTAGCTaGGTAGCCTTCTGGAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RSTSENWRLPWQRCLRHIQISCS*VAFWKD Trigger: ATCTTTCCAGAAGGCTACTCAGCTACAAGAAATTTG...TATGTGTCTTAGGCATCGTTGCCATGGCAAGCGCCAATTCTCTGATGTGGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGTCTTCCAATATTCCCTGGTGCACAAGAATCAAGGCACTATACCAACACTCAACTTGTCAACCCTTaGCTGGGTATCATGGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QSLPIFPGAQESRHYTNTQLVNP*LGIMVL Trigger: GAGAACCATGATACCCAGCCAAGGGTTGACAAGTTG...AGTGTTGGTATAGTGCCTTGATTCTTGTGCACCAGGGAATATTGGAAGACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR TCA 72 bp | CAGAGGCCAGTGGCTGGTCCACCATCTCCATGTGGCTaGCACTTAAGGGCTGCACTCCCAGGCCGCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QRPVAGPPSPCG*HLRAALPGRPG Trigger: TCCAGGGCGGCCTGGGAGTGCAGCCCTTAAGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR CCA 72 bp | AGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTaGCTGACACTTAAGGGCTGCACTCCCAGGCCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RSEASGWSTISM*LTLKGCTPRPP Trigger: GGGCGGCCTGGGAGTGCAGCCCTTAAGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAGGAGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTGGCTGACACTTGGAAGCAGCCCAACTaGTCAACCCTTGGCTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: CEEVRGQWLVHHLHVADTWKQPN*STLGWV Trigger: TACCCAGCCAAGGGTTGACAAGTTGGGCTGCTTCCA...AGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCTCCTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR CCA 72 bp | CAGGCCGCCCTGGAAGCAGCCCAACTTGTCAACCCTTaGCTGGGTATCATGGTTCTCTTTACAGTGGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QAALEAAQLVNP*LGIMVLFTVGL Trigger: CAGACCCACTGTAAAGAGAACCATGATACCCAGCCAAGGGTTGACAAGTTGGGCTGCTTCCAGGGCGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR CCA 72 bp | CCGCCCTGGAAGCAGCCCAACTTGTCAACCCTTGGCTaGGTATCATGGTTCTCTTTACAGTGGGTCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PPWKQPNLSTLG*VSWFSLQWVWS Trigger: AGACCAGACCCACTGTAAAGAGAACCATGATACCCAGCCAAGGGTTGACAAGTTGGGCTGCTTCCAGGGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR TCA 72 bp | TCTCCATTTGTACTCACTACCCCACTACCCCAATTCTaGGAACTCACCTACCTGGGTGCAGGCCCTTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPFVLTTPLPQF*ELTYLGAGPYL Trigger: GAGGTAAGGGCCTGCACCCAGGTAGGTGAGTTCTCAGAATTGGGGTAGTGGGGTAGTGAGTACAAATGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATCAGAGAATTGGCGCTTGCCATGGCAACGATGCCTAAGACACATAAGCCAAGATAGGCAGAGGAATTaGCCTGCAGACAGGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TSENWRLPWQRCLRHISQDRQRN*PADRGQ Trigger: CTGCCCCCTGTCTGCAGGCAAATTCCTCTGCCTATC...TTGGCTTATGTGTCTTAGGCATCGTTGCCATGGCAAGCGCCAATTCTCTGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCGCAGTTAGCAGAAGCAGTGGATCTGTGTCGGCAAGCTCTTCCTGTCACCTGGGAGAAAATCTCCATTaGTACTCACTACCCCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: VAVSRSSGSVSASSSCHLGENLH*YSLPHY Trigger: GTAGTGGGGTAGTGAGTACAAATGGAGATTTTCTCC...CAGGTGACAGGAAGAGCTTGCCGACACAGATCCACTGCTTCTGCTAACTGCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| 3UTR TCA 72 bp | TCTGTGTCGGCAAGCTCTTCCTGTCACCTGTCCAGATaGATATGGAGAAAATCTCCATTTGTACTCACTACC | + |
|
Preference number: 3 (lower is better) Translates to: SVSASSSCHLSR*IWRKSPFVLTT Trigger: GGTAGTGAGTACAAATGGAGATTTTCTCCATATTCATCTGGACAGGTGACAGGAAGAGCTTGCCGACACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| 3UTR TCA 72 bp | GGTTATCTTCCACGAAGACCTCAAATTTCTTGTAGCTaGGTAGCCTTCTGGAAAGATATGACTTTACAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GYLPRRPQISCS*VAFWKDMTLQK Trigger: CTTTTGTAAAGTCATATCTTTCCAGAAGGCTACTCAGCTACAAGAAATTTGAGGTCTTCGTGGAAGATAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGGAGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTGGCTGACACTTCGGCGCACAGACAGTTaGACACGCCCCAGAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRRSEASGWSTISMWLTLRRTDS*TRPRSG Trigger: GCCGCTTCTGGGGCGTGTTCAACTGTCTGTGCGCCG...AAGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCTCCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR CCA 90 bp | GGTTTGGTCGCAGTTAGCAGAAGCAGTGGATCTGTGTCGGCAAGCTCTTCCTGTTCCCGAAGGCCAGCTTaGCGGCGGCGGCGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLVAVSRSSGSVSASSSCSRRPA*RRRRPE Trigger: CTCTGGCCGCCGCCGCCGCCAAGCTGGCCTTCGGGA...ACAGGAAGAGCTTGCCGACACAGATCCACTGCTTCTGCTAACTGCGACCAAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGTCCACATCAGAGAATTGGCGCTTGCCATGGCAACGATGCCTAAGACACCGGCGCACAGACAGTTaGACACGCCCCAGAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSTSENWRLPWQRCLRHRRTDS*TRPRSG Trigger: GCCGCTTCTGGGGCGTGTTCAACTGTCTGTGCGCCG...GTGTCTTAGGCATCGTTGCCATGGCAAGCGCCAATTCTCTGATGTGGACCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| 3UTR CAA 72 bp | GGCTGCACTCCCAGGCCGCCCTGGAAGCAGCCCAACTaGTCAACCCTTGGCTGGGTATCATGGTTCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GCTPRPPWKQPN*STLGWVSWFSL Trigger: TAAAGAGAACCATGATACCCAGCCAAGGGTTGACAAGTTGGGCTGCTTCCAGGGCGGCCTGGGAGTGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR TCA 90 bp | CATTTGTACTCACTACCCCACTACCCCAATTCTGAGAACTCACCTACCTGGGTGCGGCGCACAGACAGTTaGACACGCCCCAGAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLYSLPHYPNSENSPTWVRRTDS*TRPRSG Trigger: GCCGCTTCTGGGGCGTGTTCAACTGTCTGTGCGCCG...CACCCAGGTAGGTGAGTTCTCAGAATTGGGGTAGTGGGGTAGTGAGTACAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCTTCCAATATTCCCTGGTGCACAAGAATCAAGGCACTATACCAACACTTCCCGAAGGCCAGCTTaGCGGCGGCGGCGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSLPIFPGAQESRHYTNTSRRPA*RRRRPE Trigger: CTCTGGCCGCCGCCGCCGCCAAGCTGGCCTTCGGGA...AGTGTTGGTATAGTGCCTTGATTCTTGTGCACCAGGGAATATTGGAAGACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR CCA 90 bp | GTGAGGAGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTGGCTGACACTTAAGCCAATATTGACCTaGCTCCCGAAGGCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VRRSEASGWSTISMWLTLKPILT*LPKASL Trigger: CAAGCTGGCCTTCGGGAGCCAGGTCAATATTGGCTT...AAGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGAGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTGGCTGACACTAATTGGCGCTTGCCATaGCAACGATGCCTAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: CEEVRGQWLVHHLHVADTNWRLP*QRCLRH Trigger: GTGTCTTAGGCATCGTTGCCATGGCAAGCGCCAATT...AGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCTCCTCACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTGGCTGACACTTAAGGGCTCCACATCAGAGAATTaGCGCTTGCCATGGCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: RSEASGWSTISMWLTLKGSTSEN*RLPWQR Trigger: TCGTTGCCATGGCAAGCGCCAATTCTCTGATGTGGA...GCCCTTAAGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR TCA 90 bp | AGTGGCTGGTCCACCATCTCCATGTGGCTGACACTTAAGGGCTGCACTCCCAGGTCGAGAAAGTCACTGTaGCAGATGCAATGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGWSTISMWLTLKGCTPRSRKSL*QMQWLK Trigger: CTTCAGCCATTGCATCTGTCACAGTGACTTTCTCGA...CCTGGGAGTGCAGCCCTTAAGTGTCAGCCACATGGAGATGGTGGACCAGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR CCA 90 bp | GCCTTCTGGAAAGATATGACTTTACAAAAGGACTGTAAGTCGCCAGAAATCTATTCCCGAAGGCCAGCTTaGCGGCGGCGGCGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFWKDMTLQKDCKSPEIYSRRPA*RRRRPE Trigger: CTCTGGCCGCCGCCGCCGCCAAGCTGGCCTTCGGGA...ATAGATTTCTGGCGACTTACAGTCCTTTTGTAAAGTCATATCTTTCCAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTGGCTGACACTTAAGGACAGATGCAATGGCTaGAGACATAGAGAAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRSEASGWSTISMWLTLKDRCNG*RHRETE Trigger: CTCAGTTTCTCTATGTCTTCAGCCATTGCATCTGTC...CTTAAGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR TCA 90 bp | AGAGGTTTGGTCGCAGTTAGCAGAAGCAGTGGATCTGTGTCGGCAAGCTCTTCCTCGAGAAAGTCACTGTaGCAGATGCAATGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLVAVSRSSGSVSASSSSRKSL*QMQWLK Trigger: CTTCAGCCATTGCATCTGTCACAGTGACTTTCTCGA...GGAAGAGCTTGCCGACACAGATCCACTGCTTCTGCTAACTGCGACCAAACCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| 3UTR CAA 72 bp | AAGCCAATATTGACCCTGACTGATAGGCAGAGGAATTaGCCTGCAGACAGGGGGCAGGGTTATCTTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: KPILTLTDRQRN*PADRGQGYLPR Trigger: TCGTGGAAGATAACCCTGCCCCCTGTCTGCAGGCAAATTCCTCTGCCTATCAGTCAGGGTCAATATTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAGAGGTTTGGTCGCAGTTAGCAGAAGCAGTGGATCTGTGTCGGCAAGCCACGTTCCCTTCTTTTaGTGTGGATTCATAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVRGLVAVSRSSGSVSASHVPFF*CGFIGI Trigger: GATGCCTATGAATCCACAGCAAAAGAAGGGAACGTG...GCTTGCCGACACAGATCCACTGCTTCTGCTAACTGCGACCAAACCTCTCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGTACTCACTACCCCACTACCCCAATTCTGAGAACTCACCTACCTGGGTGCTCCACATCAGAGAATTaGCGCTTGCCATGGCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: ICTHYPTTPILRTHLPGCSTSEN*RLPWQR Trigger: TCGTTGCCATGGCAAGCGCCAATTCTCTGATGTGGA...GCACCCAGGTAGGTGAGTTCTCAGAATTGGGGTAGTGGGGTAGTGAGTACAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS-3UTR CCA 90 bp | CACAAGAATCAAGGCACTATACCAACACTGAAGGACTTGGGCCTCATACTGTGGCACCATAAGATCTCCTaGCACTCTCCATACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKNQGTIPTLKDLGLILWHHKIS*HSPYSR Trigger: CCTGCTGTATGGAGAGTGCCAGGAGATCTTATGGTG...CCACAGTATGAGGCCCAAGTCCTTCAGTGTTGGTATAGTGCCTTGATTCTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR CAA 72 bp | CACAAGAATCAAGGCACTATACCAACACTGAAGGACTaGGGCCTCATACTGTGGTGGTTAGCTTCCCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HKNQGTIPTLKD*GLILWWLASPY Trigger: GTAAGGGGAAGCTAACCACCACAGTATGAGGCCCAAGTCCTTCAGTGTTGGTATAGTGCCTTGATTCTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| 3UTR CAA 72 bp | GCCATGGCAACGATGCCTAAGACACATAAGCCAATATaGACCCTGACTGATAGGCAGAGGAATTTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AMATMPKTHKPI*TLTDRQRNLPA Trigger: TGCAGGCAAATTCCTCTGCCTATCAGTCAGGGTCAATATTGGCTTATGTGTCTTAGGCATCGTTGCCATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| CDS-3UTR TCA 90 bp | CATTTGTACTCACTACCCCACTACCCCAATTCTGAGAACTCACCTACCTGGGTGGACAGATGCAATGGCTaGAGACATAGAGAAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLYSLPHYPNSENSPTWVDRCNG*RHRETE Trigger: CTCAGTTTCTCTATGTCTTCAGCCATTGCATCTGTC...CACCCAGGTAGGTGAGTTCTCAGAATTGGGGTAGTGGGGTAGTGAGTACAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS-3UTR CCA 90 bp | GATCTGTGTCGGCAAGCTCTTCCTGTCACCTGTCCAGATGAATATGGAGAAAATAATTGGCGCTTGCCATaGCAACGATGCCTAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: DLCRQALPVTCPDEYGENNWRLP*QRCLRH Trigger: GTGTCTTAGGCATCGTTGCCATGGCAAGCGCCAATT...ATTTTCTCCATATTCATCTGGACAGGTGACAGGAAGAGCTTGCCGACACAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCTTCCAATATTCCCTGGTGCACAAGAATCAAGGCACTATACCAACACTCTCCTTCCAGGTGGGTaGAAACTTCCTGTGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSLPIFPGAQESRHYTNTLLPGG*KLPVDQ Trigger: CTGATCCACAGGAAGTTTCCACCCACCTGGAAGGAG...AGTGTTGGTATAGTGCCTTGATTCTTGTGCACCAGGGAATATTGGAAGACTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR CCA 90 bp | TTCCTGTCACCTGTCCAGATGAATATGGAGAAAATCTCCATTTGTACTCACTACAAGCCAATATTGACCTaGCTCCCGAAGGCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPVQMNMEKISICTHYKPILT*LPKASL Trigger: CAAGCTGGCCTTCGGGAGCCAGGTCAATATTGGCTT...GTAGTGAGTACAAATGGAGATTTTCTCCATATTCATCTGGACAGGTGACAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCAGATGAATATGGAGAAAATCTCCATTTGTACTCACTACCCCACTACCCCTCCCTTCTTTTGCTGTaGATTCATAGGCATCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPDEYGENLHLYSLPHYPSLLLL*IHRHHG Trigger: TCCGTGATGCCTATGAATCCACAGCAAAAGAAGGGA...GGGGTAGTGGGGTAGTGAGTACAAATGGAGATTTTCTCCATATTCATCTGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS CCA 90 bp | CTTGCCATGGCAACGATGCCTAAGACACATAAGCCAATATTGACCTaGCTCCCGAAGGCCAGCTTGGCGGCGGCGGCGGCCAGAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LAMATMPKTHKPILT*LPKASLAAAAARAP Trigger: CGGGGCTCTGGCCGCCGCCGCCGCCAAGCTGGCCTTCGGGAGCCAGGTCAATATTGGCTTATGTGTCTTAGGCATCGTTGCCATGGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084733.7 ENSMUST00000213514.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGGTCAGAGGCCAGTGGCTGGTCCACCATCTCCATGTGGCTGACACTTAAGCCGGCGCACAGACAGTaGAACACGCCCCAGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSEASGWSTISMWLTLKPAHRQ*NTPQKR Trigger: CCGCTTCTGGGGCGTGTTCAACTGTCTGTGCGCCGG...CTTAAGTGTCAGCCACATGGAGATGGTGGACCAGCCACTGGCCTCTGACCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCACATCAGAGAATTGGCGCTTGCCATGGCAACGATGCCTAAGACACATCCGGCGCACAGACAGTaGAACACGCCCCAGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KVHIRELALAMATMPKTHPAHRQ*NTPQKR Trigger: CCGCTTCTGGGGCGTGTTCAACTGTCTGTGCGCCGG...ATGTGTCTTAGGCATCGTTGCCATGGCAAGCGCCAATTCTCTGATGTGGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214785.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGAGGTTTGGTCGCAGTTAGCAGAAGCAGTGGATCTGTGTCGGCAAGCTCTGTCCACATCAGAGAATaGGCGCTTGCCATGGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: VRGLVAVSRSSGSVSASSVHIRE*ALAMAT Trigger: CGTTGCCATGGCAAGCGCCAATTCTCTGATGTGGAC...AGAGCTTGCCGACACAGATCCACTGCTTCTGCTAACTGCGACCAAACCTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTGTCACCTGTCCAGATGAATATGGAGAAAATCTCCATTTGTACTCACTACCCGGCGCACAGACAGTaGAACACGCCCCAGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FLSPVQMNMEKISICTHYPAHRQ*NTPQKR Trigger: CCGCTTCTGGGGCGTGTTCAACTGTCTGTGCGCCGG...GTAGTGAGTACAAATGGAGATTTTCTCCATATTCATCTGGACAGGTGACAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS-3UTR CAA 90 bp | CACAAGAATCAAGGCACTATACCAACACTGAAGGACTTGGGCCTCATACTGTGGGTCCACATCAGAGAATaGGCGCTTGCCATGGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: HKNQGTIPTLKDLGLILWVHIRE*ALAMAT Trigger: CGTTGCCATGGCAAGCGCCAATTCTCTGATGTGGAC...CCACAGTATGAGGCCCAAGTCCTTCAGTGTTGGTATAGTGCCTTGATTCTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS-3UTR CAA 90 bp | TGGATCTGTGTCGGCAAGCTCTTCCTGTCACCTGTCCAGATGAATATGGAGAAATCAGAGAATTGGCGCTaGCCATGGCAACGATGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: WICVGKLFLSPVQMNMEKSENWR*PWQRCL Trigger: TAGGCATCGTTGCCATGGCAAGCGCCAATTCTCTGA...TTTCTCCATATTCATCTGGACAGGTGACAGGAAGAGCTTGCCGACACAGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213514.2 |
||
| CDS TCA 90 bp | CGAGCAAAGTATGTTCGAGAAAGTCACTGTGACAGATGCAATGGCTaGAGACATAGAGAAACTGAGGCCCCGGCTAAAGAAGGTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RAKYVRESHCDRCNG*RHRETEAPAKEGPH Trigger: ATGTGGACCTTCTTTAGCCGGGGCCTCAGTTTCTCTATGTCTTCAGCCATTGCATCTGTCACAGTGACTTTCTCGAACATACTTTGCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084733.7 ENSMUST00000213514.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGTCTTCCAATATTCCCTGGTGCACAAGAATCAAGGCACTATACCAACACTTCAGAGAATTGGCGCTaGCCATGGCAACGATGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: QSLPIFPGAQESRHYTNTSENWR*PWQRCL Trigger: TAGGCATCGTTGCCATGGCAAGCGCCAATTCTCTGA...AGTGTTGGTATAGTGCCTTGATTCTTGTGCACCAGGGAATATTGGAAGACTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084733.7 |
||
| CDS CCA 72 bp | GCAACGATGCCTAAGACACATAAGCCAATATTGACCTaGCTCCCGAAGGCCAGCTTGGCGGCGGCGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATMPKTHKPILT*LPKASLAAAAA Trigger: GGCCGCCGCCGCCGCCAAGCTGGCCTTCGGGAGCCAGGTCAATATTGGCTTATGTGTCTTAGGCATCGTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084733.7 ENSMUST00000213514.2 |
||
| CDS CAA 72 bp | GCCATGGCAACGATGCCTAAGACACATAAGCCAATATaGACCTGGCTCCCGAAGGCCAGCTTGGCGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AMATMPKTHKPI*TWLPKASLAAA Trigger: CGCCGCCGCCAAGCTGGCCTTCGGGAGCCAGGTCAATATTGGCTTATGTGTCTTAGGCATCGTTGCCATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084733.7 ENSMUST00000213514.2 |
||