Pregenerated sensors for TMEM39B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053730Ensembl transcript IDs: ENSMUST00000102588.10, ENSMUST00000125445.8, ENSMUST00000147668.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACTCTTCAGTCCACGGGTGCTGCAGCACATTGGAGCACAGAGCTaGGTCCACCTTCTGCCAGCAGCCCAGGTGGGCGGCGGCCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: ALFSPRVLQHIGAQS*VHLLPAAQVGGGLV Trigger: CACAAGGCCGCCGCCCACCTGGGCTGCTGGCAGAAGGTGGACCCAGCTCTGTGCTCCAATGTGCTGCAGCACCCGTGGACTGAAGAGTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR TCA 90 bp | TGGGACTCAGGAGAACCGGTGGTCCAGGTCCCTCTGGGGGCTGGCTaGGTAGGAGTAGGCTTTGCCCAATACCAGGCGGTCCCGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: WDSGEPVVQVPLGAG*VGVGFAQYQAVPEQ Trigger: CTGCTCCGGGACCGCCTGGTATTGGGCAAAGCCTACTCCTACTCAGCCAGCCCCCAGAGGGACCTGGACCACCGGTTCTCCTGAGTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CCA 90 bp | ACCCTGGGACTCAGGAGAACCGGTGGTCCAGGTCCCTCTGGGGGCTaGCTGAGTAGGAGTAGGCTTTGCCCAATACCAGGCGGTCCCGGA | + |
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Preference number: 1 (lower is better) Translates to: TLGLRRTGGPGPSGG*LSRSRLCPIPGGPG Trigger: TCCGGGACCGCCTGGTATTGGGCAAAGCCTACTCCTACTCAGCCAGCCCCCAGAGGGACCTGGACCACCGGTTCTCCTGAGTCCCAGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CCA 90 bp | AGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCCTaGGACTCAGGAGAACCGGTGGTCCAGGTCCCTCTGGGGGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: RKPLGEARMLFGGSP*DSGEPVVQVPLGAG Trigger: GCCAGCCCCCAGAGGGACCTGGACCACCGGTTCTCCTGAGTCCCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR GCA 90 bp | CTGCTTCCAAGTCTCCCGCAGTGTCAGAAAGTAGTCCCGACTCCTTaGCAGGCCACTGACTGCCTCTCGGGGTCCCATGGAAGCCATGTG | + |
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Preference number: 1 (lower is better) Translates to: LLPSLPQCQKVVPTP*QATDCLSGSHGSHV Trigger: CACATGGCTTCCATGGGACCCCGAGAGGCAGTCAGTGGCCTGGCAAGGAGTCGGGACTACTTTCTGACACTGCGGGAGACTTGGAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR GCA 90 bp | GAAGTGGGAGACATCGGAGGGGATGGCCACGTTGTAGTGGCCCACTaGTTTGTAGACATTCTTGCTGTGTTTCACCAGCACACCCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: EVGDIGGDGHVVVAH*FVDILAVFHQHTLW Trigger: CCACAGGGTGTGCTGGTGAAACACAGCAAGAATGTCTACAAAGCAGTGGGCCACTACAACGTGGCCATCCCCTCCGATGTCTCCCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CCA 90 bp | AACTCAACTTCATTGCGAATGAGGCTGGGTGACAAGCAGCAGGCATaGGTGGGCATGGCTTCCGGGCCATATAGCTGTCGTGTATGCTGC | + |
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Preference number: 1 (lower is better) Translates to: NSTSLRMRLGDKQQA*VGMASGPYSCRVCC Trigger: GCAGCATACACGACAGCTATATGGCCCGGAAGCCATGCCCACCCATGCCTGCTGCTTGTCACCCAGCCTCATTCGCAATGAAGTTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR GCA 90 bp | AGGGGATGGCCACGTTGTAGTGGCCCACTGCTTTGTAGACATTCTTaGTGTGTTTCACCAGCACACCCTGTGGCCACATGCACTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: RGWPRCSGPLLCRHS*CVSPAHPVATCTLQ Trigger: CTGAAGAGTGCATGTGGCCACAGGGTGTGCTGGTGAAACACAGCAAGAATGTCTACAAAGCAGTGGGCCACTACAACGTGGCCATCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTGCCAGGCCACTGACTGCCTCTCGGGGTCCCATGGAAGCCATGTGGGTGAACCCCAAGAGCCCTTaGCCAGGAAGCCCCTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LLARPLTASRGPMEAMWVNPKSP*PGSPWV Trigger: CACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT...CACCCACATGGCTTCCATGGGACCCCGAGAGGCAGTCAGTGGCCTGGCAAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CAA 90 bp | CCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTaGTTTGGAGGATCACCCTGGGACTCAGGAGAACCGGTGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PQEPLARKPLGEARM*FGGSPWDSGEPVVQ Trigger: CTGGACCACCGGTTCTCCTGAGTCCCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CAA 90 bp | AAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTaGGAGGATCACCCTGGGACTCAGGAGAACCGGTGGTCCAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: KSPWPGSPWVKPGCC*EDHPGTQENRWSRS Trigger: GGACCTGGACCACCGGTTCTCCTGAGTCCCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR TCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTCCTCTGGGGGCTGGCTaGGTAGGAGTAGGCTTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: QPQEPLARKPLGEARMLFPLGAG*VGVGFA Trigger: GGCAAAGCCTACTCCTACTCAGCCAGCCCCCAGAGG...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR TCA 90 bp | GGCGGCCTTGTGCAGCAGGTCACAGTAGCTGGCAGGCAACAAGTGCTGCATGAGGAGACCTTCCCCCTCTaGGAAGCCTCCTTCACGATG | + |
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Preference number: 2 (lower is better) Translates to: GGLVQQVTVAGRQQVLHEETFPL*EASFTM Trigger: CATCGTGAAGGAGGCTTCTCAGAGGGGGAAGGTCTC...CTCATGCAGCACTTGTTGCCTGCCAGCTACTGTGACCTGCTGCACAAGGCCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGGGCTGGCTGAGTAGGAGTAGGCTTTGCCCAATACCAGGCGGTCCCGGAGGATCACGGAGGTACTaGTGGACACCAGCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SGGWLSRSRLCPIPGGPGGSRRY*WTPAGR Trigger: TCTTCCTGCTGGTGTCCATCAGTACCTCCGTGATCC...TCCGGGACCGCCTGGTATTGGGCAAAGCCTACTCCTACTCAGCCAGCCCCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCTGCATGAGGATCACGGAGGTACTGATGGACACCAGCAGGAAGAGCTCAGGCGGCCCAGAACAATaGCGGTCACCATCAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: KCCMRITEVLMDTSRKSSGGPEQ*RSPSAS Trigger: ACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCC...TGAGCTCTTCCTGCTGGTGTCCATCAGTACCTCCGTGATCCTCATGCAGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCTGCATGAGGATCACGGAGGTACTGATGGACACCAGCAGGAAGAGCTCAAGGCATGGGTGGGCATaGCTTCCGGGCCATATAGCT | + |
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Preference number: 2 (lower is better) Translates to: KCCMRITEVLMDTSRKSSRHGWA*LPGHIA Trigger: AGCTATATGGCCCGGAAGCCATGCCCACCCATGCCT...TGAGCTCTTCCTGCTGGTGTCCATCAGTACCTCCGTGATCCTCATGCAGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGAACAATGGCGGTCACCATCAGCAAGTTGAAGTCGATCAGGTGGAAGTTTCACGATGGACCCGATaGATCGGCGGCCCAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: AQNNGGHHQQVEVDQVEVSRWTR*IGGPEQ Trigger: TTGTTCTGGGCCGCCGATTCATCGGGTCCATCGTGA...AACTTCCACCTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| 3UTR-3UTR CCA 90 bp | CACTCTTCAGTCCACGGGTGCTGCAGCACATTGGAGCACAGAGCTGGGTCCACCTTGAAGTCGATCAGGTaGAAGTTCTTCATTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HSSVHGCCSTLEHRAGSTLKSIR*KFFIGL Trigger: GAGGCCAATGAAGAACTTCCACCTGATCGACTTCAA...GGTGGACCCAGCTCTGTGCTCCAATGTGCTGCAGCACCCGTGGACTGAAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGAACAATGGCGGTCACCATCAGCAAGTTGAAGTCGATCAGGTGGAAGTTGGCGGCCCAGAACAATaGCGGTCACCATCAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: AQNNGGHHQQVEVDQVEVGGPEQ*RSPSAS Trigger: ACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCC...AACTTCCACCTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAAAGAAATGGAAGCGGAAGTGGGAGACATCGGAGGGGATGGCCACGTTGTACTGGCAGGCAACAAGTaGTGCATGAGGATCACGGAG | + |
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Preference number: 2 (lower is better) Translates to: EKEMEAEVGDIGGDGHVVLAGNK*CMRITE Trigger: CTCCGTGATCCTCATGCAGCACTTGTTGCCTGCCAG...TACAACGTGGCCATCCCCTCCGATGTCTCCCACTTCCGCTTCCATTTCTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR GCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTCTTTGTAGACATTCTTaGTGTGTTTCACCAGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: QPQEPLARKPLGEARMLFLCRHS*CVSPAH Trigger: GTGTGCTGGTGAAACACAGCAAGAATGTCTACAAAG...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CAA 90 bp | TCCTTCATTCGCCAATTGAAGTCCATTTTGAGGAACTCAACTTCATaGCGAATGAGGCTGGGTGACAAGCAGCAGGCATGGGTGGGCATG | + |
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Preference number: 2 (lower is better) Translates to: SFIRQLKSILRNSTS*RMRLGDKQQAWVGM Trigger: CATGCCCACCCATGCCTGCTGCTTGTCACCCAGCCTCATTCGCAATGAAGTTGAGTTCCTCAAAATGGACTTCAATTGGCGAATGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCATGGAGCTGACAAGTACTTCCTTCATTCGCCAATTGAAGTCCATTTTGGTGGAAGTTCTTCATTaGCCTCCAGCTGACTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSMELTSTSFIRQLKSILVEVLH*PPADSG Trigger: GCCTGAGTCAGCTGGAGGCCAATGAAGAACTTCCAC...CAAAATGGACTTCAATTGGCGAATGAAGGAAGTACTTGTCAGCTCCATGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR TCA 72 bp | GGAGAACCGGTGGTCCAGGTCCCTCTGGGGGCTGGCTaGGTAGGAGTAGGCTTTGCCCAATACCAGGCGGTC | + |
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Preference number: 3 (lower is better) Translates to: GEPVVQVPLGAG*VGVGFAQYQAV Trigger: GACCGCCTGGTATTGGGCAAAGCCTACTCCTACTCAGCCAGCCCCCAGAGGGACCTGGACCACCGGTTCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR TCA 72 bp | CCAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTaGAGCCCGGATGTTGTTTGGAGGATCACCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: PTPRALGQEAPG*SPDVVWRITLG Trigger: TCCCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
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| 3UTR CCA 72 bp | CTCAGGAGAACCGGTGGTCCAGGTCCCTCTGGGGGCTaGCTGAGTAGGAGTAGGCTTTGCCCAATACCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LRRTGGPGPSGG*LSRSRLCPIPG Trigger: GCCTGGTATTGGGCAAAGCCTACTCCTACTCAGCCAGCCCCCAGAGGGACCTGGACCACCGGTTCTCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR TCA 72 bp | GTGTCAGAAAGTAGTCCCGACTCCTTGCCAGGCCACTaGCTGCCTCTCGGGGTCCCATGGAAGCCATGTGGG | + |
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Preference number: 3 (lower is better) Translates to: VSESSPDSLPGH*LPLGVPWKPCG Trigger: CCCACATGGCTTCCATGGGACCCCGAGAGGCAGTCAGTGGCCTGGCAAGGAGTCGGGACTACTTTCTGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR GCA 72 bp | AGTCTCCCGCAGTGTCAGAAAGTAGTCCCGACTCCTTaGCAGGCCACTGACTGCCTCTCGGGGTCCCATGGA | + |
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Preference number: 3 (lower is better) Translates to: SLPQCQKVVPTP*QATDCLSGSHG Trigger: TCCATGGGACCCCGAGAGGCAGTCAGTGGCCTGGCAAGGAGTCGGGACTACTTTCTGACACTGCGGGAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CCA 72 bp | CTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCCTaGGACTCAGGAGAACCGGTGGTCCAGGTCCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LGEARMLFGGSP*DSGEPVVQVPL Trigger: CAGAGGGACCTGGACCACCGGTTCTCCTGAGTCCCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR TCA 72 bp | TCCCCCTCTGAGAAGCCTCCTTCACGATGGACCCGATaGATCGGCGGCCCAGAACAATGGCGGTCACCATCA | + |
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Preference number: 3 (lower is better) Translates to: SPSEKPPSRWTR*IGGPEQWRSPS Trigger: TGATGGTGACCGCCATTGTTCTGGGCCGCCGATTCATCGGGTCCATCGTGAAGGAGGCTTCTCAGAGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| 3UTR CCA 72 bp | ACATGCACTCTTCAGTCCACGGGTGCTGCAGCACATTaGAGCACAGAGCTGGGTCCACCTTCTGCCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: TCTLQSTGAAAH*STELGPPSASS Trigger: GCTGCTGGCAGAAGGTGGACCCAGCTCTGTGCTCCAATGTGCTGCAGCACCCGTGGACTGAAGAGTGCATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR TCA 72 bp | GGCGGCCCAGAACAATGGCGGTCACCATCAGCAAGTTaGAGTCGATCAGGTGGAAGTTCTGTCAGGGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GGPEQWRSPSAS*SRSGGSSVRGQ Trigger: CTGCCCCCTGACAGAACTTCCACCTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147668.2 |
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| 3UTR CCA 72 bp | TCATTGCGAATGAGGCTGGGTGACAAGCAGCAGGCATaGGTGGGCATGGCTTCCGGGCCATATAGCTGTCGT | + |
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Preference number: 3 (lower is better) Translates to: SLRMRLGDKQQA*VGMASGPYSCR Trigger: ACGACAGCTATATGGCCCGGAAGCCATGCCCACCCATGCCTGCTGCTTGTCACCCAGCCTCATTCGCAATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCCTGGGACTCAGGAGAACCGAGGAACTCAACTTCATaGCGAATGAGGCTGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: LGEARMLFGGSPWDSGEPRNSTS*RMRLGD Trigger: GTCACCCAGCCTCATTCGCAATGAAGTTGAGTTCCT...CGGTTCTCCTGAGTCCCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR TCA 72 bp | GGCGGCCCAGAACAATGGCGGTCACCATCAGCAAGTTaGAGTCGATCAGGTGGAAGTTCTTCATTGGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: GGPEQWRSPSAS*SRSGGSSSLAS Trigger: GGAGGCCAATGAAGAACTTCCACCTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR GCA 72 bp | CCACGTTGTAGTGGCCCACTGCTTTGTAGACATTCTTaGTGTGTTTCACCAGCACACCCTGTGGCCACATGC | + |
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Preference number: 3 (lower is better) Translates to: PRCSGPLLCRHS*CVSPAHPVATC Trigger: GCATGTGGCCACAGGGTGTGCTGGTGAAACACAGCAAGAATGTCTACAAAGCAGTGGGCCACTACAACGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CCA 72 bp | AGAAATGGAAGCGGAAGTGGGAGACATCGGAGGGGATaGCCACGTTGTAGTGGCCCACTGCTTTGTAGACAT | + |
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Preference number: 3 (lower is better) Translates to: RNGSGSGRHRRG*PRCSGPLLCRH Trigger: ATGTCTACAAAGCAGTGGGCCACTACAACGTGGCCATCCCCTCCGATGTCTCCCACTTCCGCTTCCATTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAACTCAACTTCATTGCGAATGAGGCTGGGTGACAAGCAGCAGGCATGGGTGGTCACCATCAGCAAGTaGAAGTCGATCAGGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RNSTSLRMRLGDKQQAWVVTISK*KSIRWK Trigger: CTTCCACCTGATCGACTTCAACTTGCTGATGGTGAC...CACCCATGCCTGCTGCTTGTCACCCAGCCTCATTCGCAATGAAGTTGAGTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| CDS-3UTR CCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGTGCCAGCAGCCCAGGTaGGCGGCGGCCTTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLECQQPR*AAALCS Trigger: GCTGCACAAGGCCGCCGCCCACCTGGGCTGCTGGCA...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR CCA 90 bp | AGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCGGCCAGCGGAGGGCTaGAGAGGCCCGTCCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPWPGSPWVKPGCCLEDHRPAEG*RGPSQK Trigger: CTTCTGGGACGGGCCTCTCCAGCCCTCCGCTGGCCG...GTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
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| CDS-3UTR GCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGAGAGGCACAACGGTCTaGGCGGCCAGCGGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLRGTTV*AASGGL Trigger: CAGCCCTCCGCTGGCCGCGCAGACCGTTGTGCCTCT...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
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| CDS-3UTR GCA 90 bp | GAAGCCTCCTTCACGATGGACCCGATGAATCGGCGGCCCAGAACAATGGCGGTCAGAGGCACAACGGTCTaGGCGGCCAGCGGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EASFTMDPMNRRPRTMAVRGTTV*AASGGL Trigger: CAGCCCTCCGCTGGCCGCGCAGACCGTTGTGCCTCT...GACCGCCATTGTTCTGGGCCGCCGATTCATCGGGTCCATCGTGAAGGAGGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS-3UTR TCA 90 bp | TTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCCTGGTCCTTGCCAGGCCACTaGCTGCCTCTCGGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LARKPLGEARMLFGGSPWSLPGH*LPLGVP Trigger: TGGGACCCCGAGAGGCAGTCAGTGGCCTGGCAAGGA...CCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR GCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGTGTGGGAGGGTGGGTaGGAGGGTGGATACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLEVWEGG*EGGYHQ Trigger: CTGGTGGTATCCACCCTCGCACCCACCCTCCCACAC...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
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| CDS-3UTR CCA 90 bp | GACCCGATGAATCGGCGGCCCAGAACAATGGCGGTCACCATCAGCAAGTTGAAGCGGCCAGCGGAGGGCTaGAGAGGCCCGTCCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: DPMNRRPRTMAVTISKLKRPAEG*RGPSQK Trigger: CTTCTGGGACGGGCCTCTCCAGCCCTCCGCTGGCCG...CTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCCGATTCATCGGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS-3UTR CCA 90 bp | CCCAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTGGTCCCTCTGGGGGCTaGCTGAGTAGGAGTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: PNPKSPWPGSPWVKPGCCGPSGG*LSRSRL Trigger: AAGCCTACTCCTACTCAGCCAGCCCCCAGAGGGACC...ACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR TCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGCCTCTGGGGGCTGGCTaGGTAGGAGTAGGCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLPLGAG*VGVGFA Trigger: GGCAAAGCCTACTCCTACTCAGCCAGCCCCCAGAGG...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR GCA 90 bp | GAAGCCTCCTTCACGATGGACCCGATGAATCGGCGGCCCAGAACAATGGCGGTCGTGTGGGAGGGTGGGTaGGAGGGTGGATACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EASFTMDPMNRRPRTMAVVWEGG*EGGYHQ Trigger: CTGGTGGTATCCACCCTCGCACCCACCCTCCCACAC...GACCGCCATTGTTCTGGGCCGCCGATTCATCGGGTCCATCGTGAAGGAGGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGCTCGAACAGAATGCTaGCCTGGACGGGCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLARTEC*PGRAAR Trigger: CCGAGCTGCCCGTCCAGGCCAGCATTCTGTTCGAGC...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
||
| CDS-3UTR CCA 90 bp | CCCAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTAAGTTCAGGGAAGTGTaGGAGGGTGGGTGCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PNPKSPWPGSPWVKPGCCKFREV*EGGCEG Trigger: ACCCTCGCACCCACCCTCCCACACTTCCCTGAACTT...ACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTAGCAGCAGGCATGGGTaGGCATGGCTTCCGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPQEPLARKPLGEARMLFSSRHG*AWLPGH Trigger: ATGGCCCGGAAGCCATGCCCACCCATGCCTGCTGCT...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| 3UTR CAA 72 bp | TGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTaGGAGGATCACCCTGGGACTCAGGAGAACCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WPGSPWVKPGCC*EDHPGTQENRW Trigger: CCACCGGTTCTCCTGAGTCCCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
||
| 3UTR CAA 72 bp | CCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTaGTTTGGAGGATCACCCTGGGACTCAGGAGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: PLARKPLGEARM*FGGSPWDSGEP Trigger: CGGTTCTCCTGAGTCCCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGTCACGATGGACCCGATaGATCGGCGGCCCAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLESRWTR*IGGPEQ Trigger: TTGTTCTGGGCCGCCGATTCATCGGGTCCATCGTGA...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR GCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGCACCCTGTGGCCACATaGACTCTTCAGTCCACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLEHPVAT*TLQSTG Trigger: ACCCGTGGACTGAAGAGTGCATGTGGCCACAGGGTG...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGAACAGAATGCTGGCCTaGACGGGCAGCTCGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLNRMLA*TGSSGI Trigger: GATCCCCGAGCTGCCCGTCCAGGCCAGCATTCTGTT...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCCTCCTTCACGATGGACCCGATGAATCGGCGGCCCAGAACAATGGCGGTCAACAGAATGCTGGCCTaGACGGGCAGCTCGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EASFTMDPMNRRPRTMAVNRMLA*TGSSGI Trigger: GATCCCCGAGCTGCCCGTCCAGGCCAGCATTCTGTT...GACCGCCATTGTTCTGGGCCGCCGATTCATCGGGTCCATCGTGAAGGAGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGCCTCCTTCACGATGGACCCGATGAATCGGCGGCCCAGAACAATGGCGCTCGAACAGAATGCTaGCCTGGACGGGCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSLLHDGPDESAAQNNGARTEC*PGRAAR Trigger: CCGAGCTGCCCGTCCAGGCCAGCATTCTGTTCGAGC...GCCATTGTTCTGGGCCGCCGATTCATCGGGTCCATCGTGAAGGAGGCTTCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGAGACATCGGAGGGGATaGCCACGTTGTAGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLERHRRG*PRCSGP Trigger: TGGGCCACTACAACGTGGCCATCCCCTCCGATGTCT...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGCCAGGGAGATGGTCTaGTGCCACTTCTCTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLEAREMV*CHFSED Trigger: GTCCTCAGAGAAGTGGCACCAGACCATCTCCCTGGC...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR TCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGACCTTCCCCCTCTaGGAAGCCTCCTTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLETFPL*EASFTM Trigger: CATCGTGAAGGAGGCTTCTCAGAGGGGGAAGGTCTC...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR TCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGGATCACGGAGGTACTaGTGGACACCAGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLEGSRRY*WTPAGR Trigger: TCTTCCTGCTGGTGTCCATCAGTACCTCCGTGATCC...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR TCA 90 bp | CCCAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTCCGCAGGGGGTTGCTaGAAAAGAAATGGAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNPKSPWPGSPWVKPGCCSAGGC*KRNGSG Trigger: TCCGCTTCCATTTCTTTTTCAGCAACCCCCTGCGGA...ACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR TCA 90 bp | AGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACGCAGCAAAAGGATGTTaGGGATCCGCAGGGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPWPGSPWVKPGCCLEDHAAKGC*GSAGGC Trigger: GCAACCCCCTGCGGATCCTCAACATCCTTTTGCTGC...GTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR TCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTACAGCTGGTAGACAATaGCGGCACCCTCCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPQEPLARKPLGEARMLFTAGRQ*RHPPAA Trigger: TGCTGCTGGAGGGTGCCGTCATTGTCTACCAGCTGT...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR GCA 90 bp | CCCAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTAGCTGTCGTGTATGCTaGTTCCAAGTCTCCCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PNPKSPWPGSPWVKPGCCSCRVC*FQVSRS Trigger: ACTGCGGGAGACTTGGAAGCAGCATACACGACAGCT...ACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | TTTCACCAGCACACCCTGTGGCCACATGCACTCTTCAGTCCACGGGTGCTGCAGAACAGAATGCTGGCCTaGACGGGCAGCTCGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FHQHTLWPHALFSPRVLQNRMLA*TGSSGI Trigger: GATCCCCGAGCTGCCCGTCCAGGCCAGCATTCTGTT...CTGCAGCACCCGTGGACTGAAGAGTGCATGTGGCCACAGGGTGTGCTGGTGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGGCGGCCCAGAACAATaGCGGTCACCATCAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLGGPEQ*RSPSAS Trigger: ACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCC...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTAGGCATGGGTGGGCATaGCTTCCGGGCCATATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPQEPLARKPLGEARMLFRHGWA*LPGHIA Trigger: AGCTATATGGCCCGGAAGCCATGCCCACCCATGCCT...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | AGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACGGTGCTGCAGCACATTaGAGCACAGAGCTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPWPGSPWVKPGCCLEDHGAAAH*STELGP Trigger: TGGACCCAGCTCTGTGCTCCAATGTGCTGCAGCACC...GTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR TCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGAACAGGGCTATGAGCTaGCAGAAGAAGAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLENRAMS*QKKSWS Trigger: GCTCCAGCTCTTCTTCTGTCAGCTCATAGCCCTGTT...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTGCTGTGTTTCACCAGCACACCCTGTGGCCACATGCACTCTTCAGTCAGAGGCACAACGGTCTaGGCGGCCAGCGGAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLCFTSTPCGHMHSSVRGTTV*AASGGL Trigger: CAGCCCTCCGCTGGCCGCGCAGACCGTTGTGCCTCT...GACTGAAGAGTGCATGTGGCCACAGGGTGTGCTGGTGAAACACAGCAAGAATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
||
| CDS-3UTR GCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTTCGGGGATCTTGCAGTaGTGTAGAGGCACAACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPQEPLARKPLGEARMLFSGILQ*CRGTTV Trigger: GACCGTTGTGCCTCTACAGCACTGCAAGATCCCCGA...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
||
| CDS-3UTR GCA 90 bp | TTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCCTGGGCAGCTCGGGGATCTTaGAGTGCTGTAGAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LARKPLGEARMLFGGSPWAARGS*SAVEAQ Trigger: TTGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGC...CCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGCTGGCAGGCAACAAGTaGTGCATGAGGATCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLLAGNK*CMRITE Trigger: CTCCGTGATCCTCATGCAGCACTTGTTGCCTGCCAG...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR GCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGTCAGTCCACGGGTGCTaGAGCACATTGGAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLSVHGC*STLEHR Trigger: TCTGTGCTCCAATGTGCTGCAGCACCCGTGGACTGA...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCTGCATGAGGATCACGGAGGTACTGATGGACACCAGCAGGAAGAGCTCGCTCGAACAGAATGCTaGCCTGGACGGGCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QVLHEDHGGTDGHQQEELARTEC*PGRAAR Trigger: CCGAGCTGCCCGTCCAGGCCAGCATTCTGTTCGAGC...GAGCTCTTCCTGCTGGTGTCCATCAGTACCTCCGTGATCCTCATGCAGCACTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGCCCATGGAAGCCATGTaGGTGAAGAGGTTCGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLEPMEAM*VKRFVL Trigger: CAAGACGAACCTCTTCACCCACATGGCTTCCATGGG...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGCAGGTCACAGTAGCTaGCAGGCAACAAGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLAGHSS*QATSAA Trigger: TGCAGCACTTGTTGCCTGCCAGCTACTGTGACCTGC...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGATTGGAGCACAGAGCTaGGTCCACCTTCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLIGAQS*VHLLPA Trigger: TGCTGGCAGAAGGTGGACCCAGCTCTGTGCTCCAAT...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR TCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGCACGAACAGGGCTATaGGCTGACAGAAGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPQEPLARKPLGEARMLFARTGL*ADRRRA Trigger: AGCTCTTCTTCTGTCAGCTCATAGCCCTGTTCGTGC...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
||
| CDS-3UTR TCA 90 bp | GGCGGCCTTGTGCAGCAGGTCACAGTAGCTGGCAGGCAACAAGTGCTGCATGAGGCACGAACAGGGCTATaGGCTGACAGAAGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLVQQVTVAGRQQVLHEARTGL*ADRRRA Trigger: AGCTCTTCTTCTGTCAGCTCATAGCCCTGTTCGTGC...CTCATGCAGCACTTGTTGCCTGCCAGCTACTGTGACCTGCTGCACAAGGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
||
| CDS-3UTR TCA 90 bp | AGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCAACTTCATTGCGAATaGGGCTGGGTGACAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPWPGSPWVKPGCCLEDHQLHCE*GWVTSS Trigger: GCTGCTTGTCACCCAGCCTCATTCGCAATGAAGTTG...GTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAGCCTCCTTCACGATGGACCCGATGAATCGGCGGCCCAGAACAATGGCGCAGCTCGGGGATCTTaGAGTGCTGTAGAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LRSLLHDGPDESAAQNNGAARGS*SAVEAQ Trigger: TTGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGC...GCCATTGTTCTGGGCCGCCGATTCATCGGGTCCATCGTGAAGGAGGCTTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACGCAGGCAACAAGTGCTaGATGAGGATCACGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPWPGSPWVKPGCCLEDHAGNKC*MRITEV Trigger: TACCTCCGTGATCCTCATGCAGCACTTGTTGCCTGC...GTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGAGTAAGATGTCCTGTTaGGACCTCTTCGTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKSPWPGSPWVKPGCCLESKMSC*DLFVLP Trigger: TGGGAGGACGAAGAGGTCCCAACAGGACATCTTACT...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTCTGAGAAGCCTCCTTCACGATGGACCCGATGAATCGGCGGCCCAGAACAGTAAGATGTCCTGTTaGGACCTCTTCGTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLRSLLHDGPDESAAQNSKMSC*DLFVLP Trigger: TGGGAGGACGAAGAGGTCCCAACAGGACATCTTACT...GTTCTGGGCCGCCGATTCATCGGGTCCATCGTGAAGGAGGCTTCTCAGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACAAATGGAAGCGGAAGTaGGAGACATCGGAGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPWPGSPWVKPGCCLEDHKWKRK*ETSEGM Trigger: CATCCCCTCCGATGTCTCCCACTTCCGCTTCCATTT...GTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| 3UTR CAA 72 bp | CGGCGGCCCAGAACAATGGCGGTCACCATCAGCAAGTaGAAGTCGATCAGGTGGAAGTTCTGTCAGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPRTMAVTISK*KSIRWKFCQGA Trigger: TGCCCCCTGACAGAACTTCCACCTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147668.2 |
||
| CDS-3UTR GCA 90 bp | GCCCAGAACAATGGCGGTCACCATCAGCAAGTTGAAGTCGATCAGGTGGAAGTTGTGTGGGAGGGTGGGTaGGAGGGTGGATACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQNNGGHHQQVEVDQVEVVWEGG*EGGYHQ Trigger: CTGGTGGTATCCACCCTCGCACCCACCCTCCCACAC...AACTTCCACCTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
||
| CDS-3UTR GCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTAGGGAGATGGTCTGGTaGCACTTCTCTGAGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: QPQEPLARKPLGEARMLFREMVW*HFSEDI Trigger: AATGTCCTCAGAGAAGTGGCACCAGACCATCTCCCT...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
||
| CDS-3UTR CCA 90 bp | TTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCCTGGAGTAAGATGTCCTGTTaGGACCTCTTCGTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LARKPLGEARMLFGGSPWSKMSC*DLFVLP Trigger: TGGGAGGACGAAGAGGTCCCAACAGGACATCTTACT...CCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
||
| CDS-3UTR TCA 90 bp | CCGATGAATCGGCGGCCCAGAACAATGGCGGTCACCATCAGCAAGTTGAAGTCGAACAGGGCTATGAGCTaGCAGAAGAAGAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PMNRRPRTMAVTISKLKSNRAMS*QKKSWS Trigger: GCTCCAGCTCTTCTTCTGTCAGCTCATAGCCCTGTT...CGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCCGATTCATCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS-3UTR TCA 90 bp | TTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCCTGGTCACCATCAGCAAGTTaGAGTCGATCAGGTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LARKPLGEARMLFGGSPWSPSAS*SRSGGS Trigger: ACTTCCACCTGATCGACTTCAACTTGCTGATGGTGA...CCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR TCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTCACTCAGCATGGAGCTaGCAAGTACTTCCTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: QPQEPLARKPLGEARMLFHSAWS*QVLPSF Trigger: GAATGAAGGAAGTACTTGTCAGCTCCATGCTGAGTG...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR GCA 90 bp | GAATCGGCGGCCCAGAACAATGGCGGTCACCATCAGCAAGTTGAAGTCGATCAGGCAGCTCGGGGATCTTaGAGTGCTGTAGAGGCACAA | + |
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Preference number: 4 (lower is better) Translates to: ESAAQNNGGHHQQVEVDQAARGS*SAVEAQ Trigger: TTGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGC...CTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCCGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS-3UTR CCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTTTGAAGTCGATCAGGTaGAAGTTCAGGGAAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QPQEPLARKPLGEARMLFLKSIR*KFREVW Trigger: CCACACTTCCCTGAACTTCCACCTGATCGACTTCAA...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR CCA 90 bp | CCCAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGCTGAAAAAGAAATaGAAGCGGAAGTGGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: PNPKSPWPGSPWVKPGCCLLKKK*KRKWET Trigger: TGTCTCCCACTTCCGCTTCCATTTCTTTTTCAGCAA...ACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| 3UTR CAA 72 bp | CGGCGGCCCAGAACAATGGCGGTCACCATCAGCAAGTaGAAGTCGATCAGGTGGAAGTTCTTCATTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RRPRTMAVTISK*KSIRWKFFIGL Trigger: GAGGCCAATGAAGAACTTCCACCTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CAA 72 bp | GGTCACACGGGCCCCTTCTTCATACATAGGCTTCTCTaGTACCCACTATCTCCCCCTGCCCAGTCCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GHTGPFFIHRLL*YPLSPPAQSFP Trigger: TGGAAAGGACTGGGCAGGGGGAGATAGTGGGTACAAGAGAAGCCTATGTATGAAGAAGGGGCCCGTGTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147668.2 |
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| CDS-3UTR GCA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGTTGTAGTGGCCCACTaGTTTGTAGACATTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: QPQEPLARKPLGEARMLFVVVAH*FVDILA Trigger: AGCAAGAATGTCTACAAAGCAGTGGGCCACTACAAC...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR TCA 90 bp | CATAGGCTTCTCTTGTACCCACTATCTCCCCCTGCCCAGTCCTTTCCACAGAGAAACAGGGCTATGAGCTaGCAGAAGAAGAGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HRLLLYPLSPPAQSFPQRNRAMS*QKKSWS Trigger: GCTCCAGCTCTTCTTCTGTCAGCTCATAGCCCTGTT...TCTCTGTGGAAAGGACTGGGCAGGGGGAGATAGTGGGTACAAGAGAAGCCTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147668.2 |
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| CDS-3UTR GCA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGCTTTGTAGACATTCTTaGTGTGTTTCACCAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLLCRHS*CVSPAH Trigger: GTGTGCTGGTGAAACACAGCAAGAATGTCTACAAAG...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| 3UTR CAA 72 bp | CGCCAATTGAAGTCCATTTTGAGGAACTCAACTTCATaGCGAATGAGGCTGGGTGACAAGCAGCAGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: RQLKSILRNSTS*RMRLGDKQQAW Trigger: CCATGCCTGCTGCTTGTCACCCAGCCTCATTCGCAATGAAGTTGAGTTCCTCAAAATGGACTTCAATTGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| CDS-3UTR GCA 90 bp | CTCAGCATGGAGCTGACAAGTACTTCCTTCATTCGCCAATTGAAGTCCATTTTGTCGGGGATCTTGCAGTaGTGTAGAGGCACAACGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSMELTSTSFIRQLKSILSGILQ*CRGTTV Trigger: GACCGTTGTGCCTCTACAGCACTGCAAGATCCCCGA...CAAAATGGACTTCAATTGGCGAATGAAGGAAGTACTTGTCAGCTCCATGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| 3UTR CAA 72 bp | AGCATGGAGCTGACAAGTACTTCCTTCATTCGCCAATaGAAGTCCATTTTGAGGAACTCAACTTCATTGCGA | + |
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Preference number: 4 (lower is better) Translates to: SMELTSTSFIRQ*KSILRNSTSLR Trigger: TCGCAATGAAGTTGAGTTCCTCAAAATGGACTTCAATTGGCGAATGAAGGAAGTACTTGTCAGCTCCATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125445.8 |
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| CDS GCA 90 bp | ACGGGCAGCTCGGGGATCTTGCAGTGCTGTAGAGGCACAACGGTCTaGGCGGCCAGCGGAGGGCTGGAGAGGCCCGTCCCAGAAGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: TGSSGILQCCRGTTV*AASGGLERPVPEVV Trigger: GACCACTTCTGGGACGGGCCTCTCCAGCCCTCCGCTGGCCGCGCAGACCGTTGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGCCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS GCA 90 bp | GGAGCTCGAACAGAATGCTGGCCTGGACGGGCAGCTCGGGGATCTTaGAGTGCTGTAGAGGCACAACGGTCTGCGCGGCCAGCGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GARTECWPGRAARGS*SAVEAQRSARPAEG Trigger: GCCCTCCGCTGGCCGCGCAGACCGTTGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGCCCGTCCAGGCCAGCATTCTGTTCGAGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS CCA 90 bp | TGCAGTGCTGTAGAGGCACAACGGTCTGCGCGGCCAGCGGAGGGCTaGAGAGGCCCGTCCCAGAAGTGGTCCTGCTTCGAGAACGGACGC | + |
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Preference number: 5 (lower is better) Translates to: CSAVEAQRSARPAEG*RGPSQKWSCFENGR Trigger: GCGTCCGTTCTCGAAGCAGGACCACTTCTGGGACGGGCCTCTCCAGCCCTCCGCTGGCCGCGCAGACCGTTGTGCCTCTACAGCACTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS CCA 90 bp | GTCCTGCTTCGAGAACGGACGCTGCTCACGGATGCACTAGAAGAGTaGCCTCCACCAGAGGCCCCTGATGATCCTGGCTCACAGAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: VLLRERTLLTDALEE*PPPEAPDDPGSQSG Trigger: CCCGCTCTGTGAGCCAGGATCATCAGGGGCCTCTGGTGGAGGCCACTCTTCTAGTGCATCCGTGAGCAGCGTCCGTTCTCGAAGCAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS-3UTR CAA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGCAGCTCGGGGATCTaGCAGTGCTGTAGAGGCACA | + |
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Preference number: 5 (lower is better) Translates to: QPQEPLARKPLGEARMLFGSSGI*QCCRGT Trigger: TGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGCC...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
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| CDS-3UTR CAA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGGCAGCTCGGGGATCTaGCAGTGCTGTAGAGGCACA | + |
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Preference number: 5 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLGSSGI*QCCRGT Trigger: TGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGCC...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 |
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| CDS-3UTR CAA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGAGCAGCAAAAGGATGTaGAGGATCCGCAGGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLSSKRM*RIRRGL Trigger: CAACCCCCTGCGGATCCTCAACATCCTTTTGCTGCT...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR CAA 90 bp | TTCTCTTGTACCCACTATCTCCCCCTGCCCAGTCCTTTCCACAGAGACTGTCCCGGCAGCTCGGGGATCTaGCAGTGCTGTAGAGGCACA | + |
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Preference number: 5 (lower is better) Translates to: FSCTHYLPLPSPFHRDCPGSSGI*QCCRGT Trigger: TGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGCC...GGGACAGTCTCTGTGGAAAGGACTGGGCAGGGGGAGATAGTGGGTACAAGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147668.2 |
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| CDS-3UTR CAA 90 bp | TTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGGATCACCCTGGGTCACCATCAGCAAGTaGAAGTCGATCAGGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LARKPLGEARMLFGGSPWVTISK*KSIRWK Trigger: CTTCCACCTGATCGACTTCAACTTGCTGATGGTGAC...CCAGGGTGATCCTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR CAA 90 bp | AACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGAGGAACTCAACTTCATaGCGAATGAGGCTGGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: NPKSPWPGSPWVKPGCCLRNSTS*RMRLGD Trigger: GTCACCCAGCCTCATTCGCAATGAAGTTGAGTTCCT...CAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR CAA 90 bp | CAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTAGGATCCGCAGGGGGTaGCTGAAAAAGAAATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: QPQEPLARKPLGEARMLFRIRRG*LKKKWK Trigger: CTTCCATTTCTTTTTCAGCAACCCCCTGCGGATCCT...AAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR CAA 90 bp | CCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTTTGGAGTCCTTCATTCGCCAATaGAAGTCCATTTTGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: PKSPWPGSPWVKPGCCLESFIRQ*KSILRN Trigger: GTTCCTCAAAATGGACTTCAATTGGCGAATGAAGGA...CTCCAAACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS-3UTR CAA 90 bp | CCCAACCCCAAGAGCCCTTGGCCAGGAAGCCCCTGGGTGAAGCCCGGATGTTGTCAATTGAAGTCCATTTaGAGGAACTCAACTTCATTG | + |
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Preference number: 5 (lower is better) Translates to: PNPKSPWPGSPWVKPGCCQLKSI*RNSTSL Trigger: CAATGAAGTTGAGTTCCTCAAAATGGACTTCAATTG...ACAACATCCGGGCTTCACCCAGGGGCTTCCTGGCCAAGGGCTCTTGGGGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS GCA 72 bp | TCGGGGATCTTGCAGTGCTGTAGAGGCACAACGGTCTaGGCGGCCAGCGGAGGGCTGGAGAGGCCCGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SGILQCCRGTTV*AASGGLERPVP Trigger: TGGGACGGGCCTCTCCAGCCCTCCGCTGGCCGCGCAGACCGTTGTGCCTCTACAGCACTGCAAGATCCCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS CCA 72 bp | CGGCCAGCGGAGGGCTGGAGAGGCCCGTCCCAGAAGTaGTCCTGCTTCGAGAACGGACGCTGCTCACGGATG | + |
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Preference number: 6 (lower is better) Translates to: RPAEGWRGPSQK*SCFENGRCSRM Trigger: CATCCGTGAGCAGCGTCCGTTCTCGAAGCAGGACCACTTCTGGGACGGGCCTCTCCAGCCCTCCGCTGGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS CCA 72 bp | GTAGAGGCACAACGGTCTGCGCGGCCAGCGGAGGGCTaGAGAGGCCCGTCCCAGAAGTGGTCCTGCTTCGAG | + |
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Preference number: 6 (lower is better) Translates to: VEAQRSARPAEG*RGPSQKWSCFE Trigger: CTCGAAGCAGGACCACTTCTGGGACGGGCCTCTCCAGCCCTCCGCTGGCCGCGCAGACCGTTGTGCCTCTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS CAA 90 bp | TGGAGCTCGAACAGAATGCTGGCCTGGACGGGCAGCTCGGGGATCTaGCAGTGCTGTAGAGGCACAACGGTCTGCGCGGCCAGCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: WSSNRMLAWTGSSGI*QCCRGTTVCAASGG Trigger: CCCTCCGCTGGCCGCGCAGACCGTTGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGCCCGTCCAGGCCAGCATTCTGTTCGAGCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS CAA 72 bp | AACAGAATGCTGGCCTGGACGGGCAGCTCGGGGATCTaGCAGTGCTGTAGAGGCACAACGGTCTGCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: NRMLAWTGSSGI*QCCRGTTVCAA Trigger: GGCCGCGCAGACCGTTGTGCCTCTACAGCACTGCAAGATCCCCGAGCTGCCCGTCCAGGCCAGCATTCTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS CCA 72 bp | CGAGAACGGACGCTGCTCACGGATGCACTAGAAGAGTaGCCTCCACCAGAGGCCCCTGATGATCCTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RERTLLTDALEE*PPPEAPDDPGS Trigger: TGAGCCAGGATCATCAGGGGCCTCTGGTGGAGGCCACTCTTCTAGTGCATCCGTGAGCAGCGTCCGTTCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS CCA 72 bp | GCTGACAGAAGAAGAGCTGGAGCTCGAACAGAATGCTaGCCTGGACGGGCAGCTCGGGGATCTTGCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ADRRRAGARTEC*PGRAARGSCSA Trigger: AGCACTGCAAGATCCCCGAGCTGCCCGTCCAGGCCAGCATTCTGTTCGAGCTCCAGCTCTTCTTCTGTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102588.10 ENSMUST00000125445.8 ENSMUST00000147668.2 |
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| CDS TCA 72 bp | GGCGGCCCAGAACAATGGCGGTCACCATCAGCAAGTTaGAGTCGATCAGGTGGAAGTTCAGGGAAGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GGPEQWRSPSAS*SRSGGSSGKCG Trigger: CCCACACTTCCCTGAACTTCCACCTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS CAA 72 bp | CGGCGGCCCAGAACAATGGCGGTCACCATCAGCAAGTaGAAGTCGATCAGGTGGAAGTTCAGGGAAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: RRPRTMAVTISK*KSIRWKFREVW Trigger: CCACACTTCCCTGAACTTCCACCTGATCGACTTCAACTTGCTGATGGTGACCGCCATTGTTCTGGGCCGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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| CDS CCA 72 bp | GTCGATCAGGTGGAAGTTCAGGGAAGTGTGGGAGGGTaGGTGCGAGGGTGGATACCACCAGACTGTCTTATA | + |
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Preference number: 6 (lower is better) Translates to: VDQVEVQGSVGG*VRGWIPPDCLI Trigger: TATAAGACAGTCTGGTGGTATCCACCCTCGCACCCACCCTCCCACACTTCCCTGAACTTCCACCTGATCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102588.10 |
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