Pregenerated sensors for TMEM39A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002845Ensembl transcript IDs: ENSMUST00000002924.15, ENSMUST00000163884.8, ENSMUST00000163948.8, ENSMUST00000165631.2, ENSMUST00000166854.2, ENSMUST00000169554.8, ENSMUST00000171687.8
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTaGGTGAAAAGAGCACCGGACCCAAGACTGGAACTCCCTCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: RAAQQTHQFRRTSSQ*VKRAPDPRLELPLL Trigger: CAGCAGAGGGAGTTCCAGTCTTGGGTCCGGTGCTCTTTTCACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR GCA 90 bp | CAGTATTGTCAGCCAGGGAAGGCAACTCCATCCATCTGTCGGAGTTaGTTTTCTAAAGCAATAATTATGGCCAGGAGAGGAACTAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: QYCQPGKATPSICRS*FSKAIIMARRGTKD Trigger: ATCTTTAGTTCCTCTCCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGCCTTCCCTGGCTGACAATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR TCA 90 bp | CTTGGATCCTTCCTGAGTGTGGGCATCCCAAGCACTTCCTGTCTTTaGAAAGCATTACTGCATGTAACTAAGAGTAAAAGGAAAACCTTT | + |
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Preference number: 1 (lower is better) Translates to: LGSFLSVGIPSTSCL*KALLHVTKSKRKTF Trigger: AAAGGTTTTCCTTTTACTCTTAGTTACATGCAGTAATGCTTTTCAAAGACAGGAAGTGCTTGGGATGCCCACACTCAGGAAGGATCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR-3UTR CCA 90 bp | CACTCCAACCACGCCACTGTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTCACCGGACCCAAGACTaGAACTCCCTCTGCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: HSNHATVERWQPEHPQAIHRTQD*NSLCCS Trigger: GCTACAGCAGAGGGAGTTCCAGTCTTGGGTCCGGTG...AATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTACAGTGGCGTGGTTGGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR CAA 90 bp | CACGCCACTGTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTaGCTGACAGTTTCCATGTCCCCACACTCTAGTGATCCACATGGC | + |
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Preference number: 2 (lower is better) Translates to: HATVERWQPEHPQAI*LTVSMSPHSSDPHG Trigger: GCCATGTGGATCACTAGAGTGTGGGGACATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTACAGTGGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR-3UTR CCA 90 bp | CACTCCAACCACGCCACTGTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTACCAGGAGAAGTCACTaGAAAGTACAAGAGCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: HSNHATVERWQPEHPQAITRRSH*KVQEQL Trigger: GAGCTGCTCTTGTACTTTCCAGTGACTTCTCCTGGT...AATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTACAGTGGCGTGGTTGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGAAAGATCAGGCAAAGTaGCAGCAAAGCCGAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: VERWQPEHPQAILLTVSMKDQAK*QQSRDH Trigger: GTGGTCTCGGCTTTGCTGTCACTTTGCCTGATCTTT...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTGGGTGGACTGGAACTCCCTCTaGTGTAGCCATCCCAGTATT | + |
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Preference number: 2 (lower is better) Translates to: TRAAQQTHQFRRTSSQWVDWNSL*CSHPSI Trigger: AATACTGGGATGGCTACAGCAGAGGGAGTTCCAGTC...CACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGTCCATCTGTCGGAGTTaGTTTTCTAAAGCAATAATT | + |
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Preference number: 2 (lower is better) Translates to: VERWQPEHPQAILLTVSMSICRS*FSKAII Trigger: AATTATTGCTTTAGAAAAGCAACTCCGACAGATGGA...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR-3UTR TCA 90 bp | GTAACTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAGTCAATCTTTTACTaGAGGGGCAACCTCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: VTKSKRKTFASESHERSGKSIFY*RGNLSC Trigger: ACATGAGAGGTTGCCCCTTCAGTAAAAGATTGACTT...GCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTGAAGTCAATCTTTTACTaGAGGGGCAACCTCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: KSKRKTFASESHERSGKVKSIFY*RGNLSC Trigger: ACATGAGAGGTTGCCCCTTCAGTAAAAGATTGACTT...CACTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTCCATCTGTCGGAGTTaGTTTTCTAAAGCAATAATT | + |
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Preference number: 2 (lower is better) Translates to: LRVKGKPLQVKAMKDQAKSICRS*FSKAII Trigger: AATTATTGCTTTAGAAAAGCAACTCCGACAGATGGA...CTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR TCA 72 bp | AGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTaGCAGTTTCCATGTCCCCACACTCTAGTGATCCAC | + |
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Preference number: 3 (lower is better) Translates to: RGGSRSTLRLFC*QFPCPHTLVIH Trigger: GTGGATCACTAGAGTGTGGGGACATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR CCA 72 bp | CAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTaGGTGAAAAGAGCACCGGACCCAAGACTGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: QQTHQFRRTSSQ*VKRAPDPRLEL Trigger: GAGTTCCAGTCTTGGGTCCGGTGCTCTTTTCACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR TCA 72 bp | TGGCATTTACACTCAGCTCCTCCCTTGGATCCTTCCTaGGTGTGGGCATCCCAAGCACTTCCTGTCTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: WHLHSAPPLDPS*VWASQALPVFE Trigger: TTCAAAGACAGGAAGTGCTTGGGATGCCCACACTCAGGAAGGATCCAAGGGAGGAGCTGAGTGTAAATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR GCA 72 bp | CAGCCAGGGAAGGCAACTCCATCCATCTGTCGGAGTTaGTTTTCTAAAGCAATAATTATGGCCAGGAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: QPGKATPSICRS*FSKAIIMARRG Trigger: TCCTCTCCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGCCTTCCCTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR TCA 72 bp | TTCCTGAGTGTGGGCATCCCAAGCACTTCCTGTCTTTaGAAAGCATTACTGCATGTAACTAAGAGTAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FLSVGIPSTSCL*KALLHVTKSKR Trigger: CCTTTTACTCTTAGTTACATGCAGTAATGCTTTTCAAAGACAGGAAGTGCTTGGGATGCCCACACTCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR TCA 72 bp | CTGCACTGTTGGGGAACAAATCAGACCTCGTGCATATaGAACAAGTACATTAATATATACTTATTAACATGT | + |
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Preference number: 3 (lower is better) Translates to: LHCWGTNQTSCI*NKYINIYLLTC Trigger: ACATGTTAATAAGTATATATTAATGTACTTGTTTCATATGCACGAGGTCTGATTTGTTCCCCAACAGTGCAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR GCA 90 bp | CACTCCAACCACGCCACTGTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTCCAACTTCTGCCACTTaGCCAGGTGAGCAGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: HSNHATVERWQPEHPQAIPTSAT*PGEQLI Trigger: AATCAGCTGCTCACCTGGGCAAGTGGCAGAAGTTGG...AATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTACAGTGGCGTGGTTGGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CCA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGGCCATGGAGAGCGTGTaGTTCCACTTCTCCGACCGC | + |
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Preference number: 4 (lower is better) Translates to: VERWQPEHPQAILLTVSMAMESV*FHFSDR Trigger: GCGGTCGGAGAAGTGGAACCACACGCTCTCCATGGC...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | CACTCCAACCACGCCACTGTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTCGCACCAACACCCCTTaGGGCCATATTGTGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: HSNHATVERWQPEHPQAIRTNTP*GHIVFS Trigger: AGAAAACACAATATGGCCTCAAGGGGTGTTGGTGCG...AATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTACAGTGGCGTGGTTGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR GCA 90 bp | CACTCCAACCACGCCACTGTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTGTGCTGTGGAGCATTaGTGTAGAACCCATGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HSNHATVERWQPEHPQAICAVEH*CRTHAP Trigger: TGGAGCATGGGTTCTACAGCAATGCTCCACAGCACA...AATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTACAGTGGCGTGGTTGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATTTAGCTGCTGCCGACTaGGACCCCGCCTTCTACTGG | + |
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Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHLAAAD*DPAFYW Trigger: CCAGTAGAAGGCGGGGTCCCAGTCGGCAGCAGCTAA...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | GGAACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCTCAGGGATTTGGCAATaGCGAACAGGACCTGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GTPSAVAIPVLSAREGNSSGIWQ*RTGPGV Trigger: TACCCCAGGTCCTGTTCGTCATTGCCAAATCCCTGA...GGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | ACAAGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTGGGTGTGCCACTTGCCCAGGTaGGCAGCTGATTTGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TRAAQQTHQFRRTSSQWVCHLPR*AADLCS Trigger: GCTACACAAATCAGCTGCTCACCTGGGCAAGTGGCA...CACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | GGAACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCCTACTTCATTGCGAATaGGATCAGGAGATAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GTPSAVAIPVLSAREGNSLLHCE*DQEIGG Trigger: GCCCCCTATCTCCTGATCTCATTCGCAATGAAGTAG...GGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGAGTTGCAGAAAAGGATaGGGGCCATGGAGAGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: VERWQPEHPQAILLTVSMSCRKG*GPWRAC Trigger: ACACGCTCTCCATGGCCCTCATCCTTTTCTGCAACT...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR GCA 90 bp | ACAAGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTGGGTGCACACCATAATGAGGTaGTCACACGACCAGCGCATG | + |
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Preference number: 4 (lower is better) Translates to: TRAAQQTHQFRRTSSQWVHTIMR*SHDQRM Trigger: CATGCGCTGGTCGTGTGAGCACCTCATTATGGTGTG...CACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CCA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGCGACCAACGTCTGTATaGAAGGTAAAGCTGACCGGC | + |
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Preference number: 4 (lower is better) Translates to: VERWQPEHPQAILLTVSMRPTSV*KVKLTG Trigger: GCCGGTCAGCTTTACCTTCCATACAGACGTTGGTCG...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR CAA 72 bp | AAGACTGGAACTCCCTCTGCTGTAGCCATCCCAGTATaGTCAGCCAGGGAAGGCAACTCCATCCATCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: KTGTPSAVAIPV*SAREGNSIHLS Trigger: CGACAGATGGATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTTCCAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| 3UTR CAA 72 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTaGCTGACAGTTTCCATGTCCCCACACTCTAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: VERWQPEHPQAI*LTVSMSPHSSD Trigger: ATCACTAGAGTGTGGGGACATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | GGAACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCGTACAAGAAGCAGGATaGTTGTACGGATACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: GTPSAVAIPVLSAREGNSVQEAG*LYGYHH Trigger: GTGGTGGTATCCGTACAATCATCCTGCTTCTTGTAC...GGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGCAAGGAACAGGAGATTaGGGACTGAATGGCTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: VERWQPEHPQAILLTVSMQGTGD*GLNGFG Trigger: TCCGAAGCCATTCAGTCCTCAATCTCCTGTTCCTTG...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATAGTTGCAGAAAAGGATaGGGGCCATGGAGAGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHSCRKG*GPWRAC Trigger: ACACGCTCTCCATGGCCCTCATCCTTTTCTGCAACT...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR GCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATCACACCATAATGAGGTaGTCACACGACCAGCGCATG | + |
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Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHHTIMR*SHDQRM Trigger: CATGCGCTGGTCGTGTGAGCACCTCATTATGGTGTG...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR GCA 90 bp | ACAAGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTGGGTGCTCGATATAAACATCTaGTGTGCCGCACCAACACCC | + |
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Preference number: 4 (lower is better) Translates to: TRAAQQTHQFRRTSSQWVLDINI*CAAPTP Trigger: GGGTGTTGGTGCGGCACAGCAGATGTTTATATCGAG...CACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR GCA 90 bp | ACAAGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTGGGTGGGTAGGAGTATGCCCTaGCTAAGACTATTCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TRAAQQTHQFRRTSSQWVGRSMP*LRLFCP Trigger: GGGACAGAATAGTCTTAGGCAGGGCATACTCCTACC...CACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATTGTGGTGGGTGGGACTaGAAGGCCAATAGCATTACC | + |
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Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHCGGWD*KANSIT Trigger: GGTAATGCTATTGGCCTTCCAGTCCCACCCACCACA...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CCA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGGTCACAGTATTTGGATaGCAGCAGTTGCGTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VERWQPEHPQAILLTVSMVTVFG*QQLRGE Trigger: CTCACCACGCAACTGCTGCCATCCAAATACTGTGAC...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CCA 90 bp | ACAAGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTGGGTGGCAAGTCACAGTATTTaGATGGCAGCAGTTGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: TRAAQQTHQFRRTSSQWVASHSI*MAAVAW Trigger: CCACGCAACTGCTGCCATCCAAATACTGTGACTTGC...CACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGGTACAAGAAGCAGGATaGTTGTACGGATACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: VERWQPEHPQAILLTVSMVQEAG*LYGYHH Trigger: GTGGTGGTATCCGTACAATCATCCTGCTTCTTGTAC...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | GGAACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCCAGGAGATTGAGGACTaGATGGCTTCGGAAAAGATT | + |
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Preference number: 4 (lower is better) Translates to: GTPSAVAIPVLSAREGNSQEIED*MASEKI Trigger: AATCTTTTCCGAAGCCATTCAGTCCTCAATCTCCTG...GGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR TCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATCAAGGAACAGGAGATTaGGGACTGAATGGCTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHQGTGD*GLNGFG Trigger: TCCGAAGCCATTCAGTCCTCAATCTCCTGTTCCTTG...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR GCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATCTCGATATAAACATCTaGTGTGCCGCACCAACACCC | + |
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Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHLDINI*CAAPTP Trigger: GGGTGTTGGTGCGGCACAGCAGATGTTTATATCGAG...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATGTCACAGTATTTGGATaGCAGCAGTTGCGTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHVTVFG*QQLRGE Trigger: CTCACCACGCAACTGCTGCCATCCAAATACTGTGAC...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATGCAAGTCACAGTATTTaGATGGCAGCAGTTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHASHSI*MAAVAW Trigger: CCACGCAACTGCTGCCATCCAAATACTGTGACTTGC...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR TCA 90 bp | CACTCCAACCACGCCACTGTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTCCAGGTAATAATCAATaGGGTGAAAATTCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSNHATVERWQPEHPQAIPGNNQ*GENSVK Trigger: CTTCACTGAATTTTCACCTCATTGATTATTACCTGG...AATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTACAGTGGCGTGGTTGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCCACTGTGATGAATGCTaGCAGGTAATAATCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTPSAVAIPVLSAREGNSHCDEC*QVIINE Trigger: CTCATTGATTATTACCTGGCAGCATTCATCACAGTG...GGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGAGATTGAGGACTGAATaGCTTCGGAAAAGATTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VERWQPEHPQAILLTVSMRLRTE*LRKRLT Trigger: GGTCAATCTTTTCCGAAGCCATTCAGTCCTCAATCT...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR TCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATGAGGTGAAAATTCAGTaGAGTACAAGAAGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHEVKIQ*STRSRM Trigger: CATCCTGCTTCTTGTACTTCACTGAATTTTCACCTC...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | GCAACTCCATCCATCTGTCGGAGTTGCTTTTCTAAAGCAATAATTATGGCCAGGAGCCGCCTCCTCTACTaGCTGGTGCTGAACCACATA | + |
|
Preference number: 4 (lower is better) Translates to: ATPSICRSCFSKAIIMARSRLLY*LVLNHI Trigger: TATGTGGTTCAGCACCAGGCAGTAGAGGAGGCGGCT...CCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002924.15 |
||
| 3UTR CAA 72 bp | GGTATAGATCAAATTCTGAGACAGAGCAGCACCTTCTaGTATTTTCGCTCCCTCGTCACTCCAACCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GIDQILRQSSTF*YFRSLVTPTTP Trigger: TGGCGTGGTTGGAGTGACGAGGGAGCGAAAATACAAGAAGGTGCTGCTCTGTCTCAGAATTTGATCTATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR TCA 90 bp | GCAACTCCATCCATCTGTCGGAGTTGCTTTTCTAAAGCAATAATTATGGCCAGGTCAGGGATTTGGCAATaGCGAACAGGACCTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ATPSICRSCFSKAIIMARSGIWQ*RTGPGV Trigger: TACCCCAGGTCCTGTTCGTCATTGCCAAATCCCTGA...CCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATCACTGTGATGAATGCTaGCAGGTAATAATCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHHCDEC*QVIINE Trigger: CTCATTGATTATTACCTGGCAGCATTCATCACAGTG...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTGGGTGCATCACTGTGATGAATaGTGCCAGGTAATAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRAAQQTHQFRRTSSQWVHHCDE*CQVIIN Trigger: ATTGATTATTACCTGGCAGCATTCATCACAGTGATG...CACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | GCAACTCCATCCATCTGTCGGAGTTGCTTTTCTAAAGCAATAATTATGGCCAGGCCAACTTCTGCCACTTaGCCAGGTGAGCAGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ATPSICRSCFSKAIIMARPTSAT*PGEQLI Trigger: AATCAGCTGCTCACCTGGGCAAGTGGCAGAAGTTGG...CCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTTAGCTGCTGCCGACTaGGACCCCGCCTTCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVKGKPLQVKAMKDQAKLAAAD*DPAFYW Trigger: CCAGTAGAAGGCGGGGTCCCAGTCGGCAGCAGCTAA...CTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CCA 90 bp | GCAACTCCATCCATCTGTCGGAGTTGCTTTTCTAAAGCAATAATTATGGCCAGGCGACCAACGTCTGTATaGAAGGTAAAGCTGACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATPSICRSCFSKAIIMARRPTSV*KVKLTG Trigger: GCCGGTCAGCTTTACCTTCCATACAGACGTTGGTCG...CCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CCA 90 bp | GTAACTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCGCCATGGAGAGCGTGTaGTTCCACTTCTCCGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: VTKSKRKTFASESHERSGAMESV*FHFSDR Trigger: GCGGTCGGAGAAGTGGAACCACACGCTCTCCATGGC...GCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR TCA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATCCAGGTAATAATCAATaGGGTGAAAATTCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHPGNNQ*GENSVK Trigger: CTTCACTGAATTTTCACCTCATTGATTATTACCTGG...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR TCA 90 bp | GCAACTCCATCCATCTGTCGGAGTTGCTTTTCTAAAGCAATAATTATGGCCAGGCTACTTCATTGCGAATaGGATCAGGAGATAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATPSICRSCFSKAIIMARLLHCE*DQEIGG Trigger: GCCCCCTATCTCCTGATCTCATTCGCAATGAAGTAG...CCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR TCA 90 bp | GTAACTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCTGCCACTTGCCCAGGTaGGCAGCTGATTTGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTKSKRKTFASESHERSGCHLPR*AADLCS Trigger: GCTACACAAATCAGCTGCTCACCTGGGCAAGTGGCA...GCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | GCAACTCCATCCATCTGTCGGAGTTGCTTTTCTAAAGCAATAATTATGGCCAGGACACAGCGGGAGAAATaGAACGTAGTAGGCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATPSICRSCFSKAIIMARTQREK*NVVGTE Trigger: TTCAGTGCCTACTACGTTGCATTTCTCCCGCTGTGT...CCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTGGAACCACATAGTCTGTaGGAAGAAGATGGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSKRKTFASESHERSGKVEPHSL*EEDGLC Trigger: GCAGAGCCCATCTTCTTCTCACAGACTATGTGGTTC...CACTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002924.15 |
||
| CDS-3UTR TCA 90 bp | AAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTGCGCACCAACACCCCTTaGGGCCATATTGTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSKRKTFASESHERSGKVRTNTP*GHIVFS Trigger: AGAAAACACAATATGGCCTCAAGGGGTGTTGGTGCG...CACTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | GTAACTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCTGTGCTGTGGAGCATTaGTGTAGAACCCATGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTKSKRKTFASESHERSGCAVEH*CRTHAP Trigger: TGGAGCATGGGTTCTACAGCAATGCTCCACAGCACA...GCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | GTAACTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCGGTAGGAGTATGCCCTaGCTAAGACTATTCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTKSKRKTFASESHERSGGRSMP*LRLFCP Trigger: GGGACAGAATAGTCTTAGGCAGGGCATACTCCTACC...GCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | GTAACTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCACACAGCGGGAGAAATaGAACGTAGTAGGCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTKSKRKTFASESHERSGTQREK*NVVGTE Trigger: TTCAGTGCCTACTACGTTGCATTTCTCCCGCTGTGT...GCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTCTGTGAGAAGAAGATaGGCTCTGCTATCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVKGKPLQVKAMKDQAKSVRRR*ALLSWW Trigger: CCACCAAGATAGCAGAGCCCATCTTCTTCTCACAGA...CTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002924.15 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGCAGGAGATTGAGGACTaGATGGCTTCGGAAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LRVKGKPLQVKAMKDQAKQEIED*MASEKI Trigger: AATCTTTTCCGAAGCCATTCAGTCCTCAATCTCCTG...CTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTGGGAAATCTTTGGATCTaGCCAAACTGCCCACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSKRKTFASESHERSGKVGNLWI*PNCPHL Trigger: CAAATGTGGGCAGTTTGGCCAGATCCAAAGATTTCC...CACTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002924.15 |
||
| CDS-3UTR CCA 90 bp | AAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTGAGATTGAGGACTGAATaGCTTCGGAAAAGATTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KSKRKTFASESHERSGKVRLRTE*LRKRLT Trigger: GGTCAATCTTTTCCGAAGCCATTCAGTCCTCAATCT...CACTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTGCATTGTAAGGTCCCATaGCTCGATATAAACATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSKRKTFASESHERSGKVHCKVP*LDINIC Trigger: GCAGATGTTTATATCGAGCCATGGGACCTTACAATG...CACTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CCA 90 bp | GTAACTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCCATTGTAAGGTCCCATaGCTCGATATAAACATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTKSKRKTFASESHERSGHCKVP*LDINIC Trigger: GCAGATGTTTATATCGAGCCATGGGACCTTACAATG...GCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGCATCACTGTGATGAATaGTGCCAGGTAATAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRVKGKPLQVKAMKDQAKHHCDE*CQVIIN Trigger: ATTGATTATTACCTGGCAGCATTCATCACAGTGATG...CTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS CCA 90 bp | TCAAGCCCGTCCCATTGCCACAGCCGCCGCCGACCAACGTCTGTATaGAAGGTAAAGCTGACCGGCTTAGCTGCTGCCGACTGGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSHCHSRRRPTSV*KVKLTGLAAADWDP Trigger: GGGGTCCCAGTCGGCAGCAGCTAAGCCGGTCAGCTTTACCTTCCATACAGACGTTGGTCGGCGGCGGCTGTGGCAATGGGACGGGCTTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000171687.8 |
||
| CDS GCA 90 bp | GCGGGCCAGGATCAGAGCTGTGTAGTGAACCGTAGACGCAGCACCTaGTTTAGTAGCCTCGGAAATGAGGGCCCATACAAGCCTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AGQDQSCVVNRRRST*FSSLGNEGPYKPPR Trigger: GCGAGGAGGCTTGTATGGGCCCTCATTTCCGAGGCTACTAAAGCAGGTGCTGCGTCTACGGTTCACTACACAGCTCTGATCCTGGCCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000166854.2 ENSMUST00000171687.8 |
||
| CDS-3UTR CAA 90 bp | CACTCCAACCACGCCACTGTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTCCAAGGAACAGGAGATaGAGGACTGAATGGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HSNHATVERWQPEHPQAIPRNRR*RTEWLR Trigger: CCGAAGCCATTCAGTCCTCAATCTCCTGTTCCTTGG...AATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTACAGTGGCGTGGTTGGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CAA 90 bp | GCAACTCCATCCATCTGTCGGAGTTGCTTTTCTAAAGCAATAATTATGGCCAGGCTCAAGCCCGTCCCATaGCCACAGCCGCCGCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: ATPSICRSCFSKAIIMARLKPVP*PQPPPT Trigger: GGTCGGCGGCGGCTGTGGCAATGGGACGGGCTTGAG...CCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CAA 90 bp | CACTCCAACCACGCCACTGTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTCCCCTTGAGGCCATATaGTGTTTTCTGACCAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: HSNHATVERWQPEHPQAIPLEAI*CFLTKC Trigger: ACATTTGGTCAGAAAACACAATATGGCCTCAAGGGG...AATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTACAGTGGCGTGGTTGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGCCGCACCAACACCCCTaGAGGCCATATTGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VERWQPEHPQAILLTVSMPHQHP*RPYCVF Trigger: GAAAACACAATATGGCCTCAAGGGGTGTTGGTGCGG...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS GCA 90 bp | GAGACTCCAGCAGTAAGGAGAGGAAATCTTTGGATCTGGCCAAACTaGCCACATTTGAAGCCGCCTCCTCTACTGCCTGGTGCTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: ETPAVRRGNLWIWPN*PHLKPPPLLPGAEP Trigger: TGGTTCAGCACCAGGCAGTAGAGGAGGCGGCTTCAAATGTGGGCAGTTTGGCCAGATCCAAAGATTTCCTCTCCTTACTGCTGGAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000166854.2 ENSMUST00000169554.8 |
||
| CDS-3UTR CAA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATCCAAGGAACAGGAGATaGAGGACTGAATGGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHPRNRR*RTEWLR Trigger: CCGAAGCCATTCAGTCCTCAATCTCCTGTTCCTTGG...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS CCA 90 bp | GGGCATGGGATACATCTGAAGGCACTGCTACATTGTAAGGTCCCATaGCTCGATATAAACATCTGCTGTGCCGCACCAACACCCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GHGIHLKALLHCKVP*LDINICCAAPTPLE Trigger: CTCAAGGGGTGTTGGTGCGGCACAGCAGATGTTTATATCGAGCCATGGGACCTTACAATGTAGCAGTGCCTTCAGATGTATCCCATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000171687.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGCTCAAGCCCGTCCCATaGCCACAGCCGCCGCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: LRVKGKPLQVKAMKDQAKLKPVP*PQPPPT Trigger: GGTCGGCGGCGGCTGTGGCAATGGGACGGGCTTGAG...CTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
||
| CDS TCA 90 bp | TCAAAGAACAGGCTCCCATCTACTGGTAAGTCAGGGATTTGGCAATaGCGAACAGGACCTGGGGTAATTAAGGCTGTGGTGGGTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SKNRLPSTGKSGIWQ*RTGPGVIKAVVGGT Trigger: AGTCCCACCCACCACAGCCTTAATTACCCCAGGTCCTGTTCGTCATTGCCAAATCCCTGACTTACCAGTAGATGGGAGCCTGTTCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000171687.8 |
||
| CDS GCA 90 bp | GCTGTGGAGCATTGCTGTAGAACCCATGCTCCAACTTCTGCCACTTaGCCAGGTGAGCAGCTGATTTGTGTAGCAAGTCACAGTATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVEHCCRTHAPTSAT*PGEQLICVASHSIW Trigger: CCAAATACTGTGACTTGCTACACAAATCAGCTGCTCACCTGGGCAAGTGGCAGAAGTTGGAGCATGGGTTCTACAGCAATGCTCCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000165631.2 ENSMUST00000169554.8 ENSMUST00000171687.8 |
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| CDS-3UTR CAA 90 bp | GGAACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCAGCATGACAAAAGCATaGATCCACACCATAATGAGG | + |
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Preference number: 5 (lower is better) Translates to: GTPSAVAIPVLSAREGNSSMTKA*IHTIMR Trigger: CCTCATTATGGTGTGGATCAATGCTTTTGTCATGCT...GGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CAA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGCCCCTTGAGGCCATATaGTGTTTTCTGACCAAATGT | + |
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Preference number: 5 (lower is better) Translates to: VERWQPEHPQAILLTVSMPLEAI*CFLTKC Trigger: ACATTTGGTCAGAAAACACAATATGGCCTCAAGGGG...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS TCA 90 bp | CCCATGGCTCGATATAAACATCTGCTGTGCCGCACCAACACCCCTTaGGGCCATATTGTGTTTTCTGACCAAATGTGCTGTGGAGCATTG | + |
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Preference number: 5 (lower is better) Translates to: PMARYKHLLCRTNTP*GHIVFSDQMCCGAL Trigger: CAATGCTCCACAGCACATTTGGTCAGAAAACACAATATGGCCTCAAGGGGTGTTGGTGCGGCACAGCAGATGTTTATATCGAGCCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000165631.2 ENSMUST00000171687.8 |
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| CDS CCA 90 bp | GTTCTTTTAGAGACTCCAGCAGTAAGGAGAGGAAATCTTTGGATCTaGCCAAACTGCCCACATTTGAAGCCGCCTCCTCTACTGCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: VLLETPAVRRGNLWI*PNCPHLKPPPLLPG Trigger: ACCAGGCAGTAGAGGAGGCGGCTTCAAATGTGGGCAGTTTGGCCAGATCCAAAGATTTCCTCTCCTTACTGCTGGAGTCTCTAAAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000166854.2 ENSMUST00000169554.8 |
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| CDS CCA 90 bp | TGTGGTTCCACTTATCTGAAGGCACTGCTACATTGTAAGGTCCCATaGCTCGATATAAACATCTGCTGTGCCGCACCAACACCCCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: CGSTYLKALLHCKVP*LDINICCAAPTPLE Trigger: CTCAAGGGGTGTTGGTGCGGCACAGCAGATGTTTATATCGAGCCATGGGACCTTACAATGTAGCAGTGCCTTCAGATAAGTGGAACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165631.2 |
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| CDS TCA 90 bp | AACATAAACACCAAACGGATAGCCAAGGAACAGGAGATTGAGGACTaGATGGCTTCGGAAAAGATTGACCAGGGTCCAGCAGAGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: NINTKRIAKEQEIED*MASEKIDQGPAEHP Trigger: TGGGTGCTCTGCTGGACCCTGGTCAATCTTTTCCGAAGCCATTCAGTCCTCAATCTCCTGTTCCTTGGCTATCCGTTTGGTGTTTATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000166854.2 |
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| CDS GCA 90 bp | AAGGCACTGCTACATTGTAAGGTCCCATGGCTCGATATAAACATCTaGTGTGCCGCACCAACACCCCTTGAGGCCATATTGTGTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: KALLHCKVPWLDINI*CAAPTPLEAILCFL Trigger: CAGAAAACACAATATGGCCTCAAGGGGTGTTGGTGCGGCACAGCAGATGTTTATATCGAGCCATGGGACCTTACAATGTAGCAGTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000165631.2 ENSMUST00000171687.8 |
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| CDS-3UTR CAA 90 bp | ACAAGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTGGGTGAGACATTCTACTTCATaGCGAATGAGATCAGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: TRAAQQTHQFRRTSSQWVRHSTS*RMRSGD Trigger: ATCTCCTGATCTCATTCGCAATGAAGTAGAATGTCT...CACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CAA 90 bp | GTAGAGAGGTGGCAGCCGGAGCACCCTCAGGCTATTTTGCTGACAGTTTCCATGTCCTTGATTCTGTGGTaGAAATCTGCTTTCAGACAT | + |
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Preference number: 5 (lower is better) Translates to: VERWQPEHPQAILLTVSMSLILW*KSAFRH Trigger: ATGTCTGAAAGCAGATTTCAACCACAGAATCAAGGA...CATGGAAACTGTCAGCAAAATAGCCTGAGGGTGCTCCGGCTGCCACCTCTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CAA 90 bp | AACTCCCTCTGCTGTAGCCATCCCAGTATTGTCAGCCAGGGAAGGCAACTCCATTCCTTGATTCTGTGGTaGAAATCTGCTTTCAGACAT | + |
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Preference number: 5 (lower is better) Translates to: NSLCCSHPSIVSQGRQLHSLILW*KSAFRH Trigger: ATGTCTGAAAGCAGATTTCAACCACAGAATCAAGGA...ATGGAGTTGCCTTCCCTGGCTGACAATACTGGGATGGCTACAGCAGAGGGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CAA 90 bp | ACAAGAGCAGCTCAGCAGACACACCAGTTTAGAAGGACCTCCTCCCAGTGGGTGTTGAAGAGAACTTCCTaGATTCTGTGGTTGAAATCT | + |
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Preference number: 5 (lower is better) Translates to: TRAAQQTHQFRRTSSQWVLKRTS*ILWLKS Trigger: AGATTTCAACCACAGAATCAAGGAAGTTCTCTTCAA...CACCCACTGGGAGGAGGTCCTTCTAAACTGGTGTGTCTGCTGAGCTGCTCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CAA 90 bp | GCAACTCCATCCATCTGTCGGAGTTGCTTTTCTAAAGCAATAATTATGGCCAGGCCGCACCAACACCCCTaGAGGCCATATTGTGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ATPSICRSCFSKAIIMARPHQHP*RPYCVF Trigger: GAAAACACAATATGGCCTCAAGGGGTGTTGGTGCGG...CCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CAA 90 bp | AAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGTGATGGGCTCTGCTATCTaGGTGGAAACAGTAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: KSKRKTFASESHERSGKVMGSAI*VETVER Trigger: CCTCTCTACTGTTTCCACCAAGATAGCAGAGCCCAT...CACTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002924.15 |
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| CDS-3UTR CAA 90 bp | GCAACTCCATCCATCTGTCGGAGTTGCTTTTCTAAAGCAATAATTATGGCCAGGTTGAAGAGAACTTCCTaGATTCTGTGGTTGAAATCT | + |
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Preference number: 5 (lower is better) Translates to: ATPSICRSCFSKAIIMARLKRTS*ILWLKS Trigger: AGATTTCAACCACAGAATCAAGGAAGTTCTCTTCAA...CCTGGCCATAATTATTGCTTTAGAAAAGCAACTCCGACAGATGGATGGAGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS-3UTR CAA 90 bp | CTAAGAGTAAAAGGAAAACCTTTGCAAGTGAAAGCCATGAAAGATCAGGCAAAGAGACATTCTACTTCATaGCGAATGAGATCAGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: LRVKGKPLQVKAMKDQAKRHSTS*RMRSGD Trigger: ATCTCCTGATCTCATTCGCAATGAAGTAGAATGTCT...CTTTGCCTGATCTTTCATGGCTTTCACTTGCAAAGGTTTTCCTTTTACTCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002924.15 ENSMUST00000171687.8 |
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| CDS CCA 72 bp | TCCCATTGCCACAGCCGCCGCCGACCAACGTCTGTATaGAAGGTAAAGCTGACCGGCTTAGCTGCTGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: SHCHSRRRPTSV*KVKLTGLAAAD Trigger: GTCGGCAGCAGCTAAGCCGGTCAGCTTTACCTTCCATACAGACGTTGGTCGGCGGCGGCTGTGGCAATGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000171687.8 |
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| CDS GCA 72 bp | GCAGTAAGGAGAGGAAATCTTTGGATCTGGCCAAACTaGCCACATTTGAAGCCGCCTCCTCTACTGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AVRRGNLWIWPN*PHLKPPPLLPG Trigger: ACCAGGCAGTAGAGGAGGCGGCTTCAAATGTGGGCAGTTTGGCCAGATCCAAAGATTTCCTCTCCTTACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000166854.2 ENSMUST00000169554.8 |
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| CDS CAA 72 bp | AGAGGAAATCTTTGGATCTGGCCAAACTGCCCACATTaGAAGCCGCCTCCTCTACTGCCTGGTGCTGAACCA | + |
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Preference number: 6 (lower is better) Translates to: RGNLWIWPNCPH*KPPPLLPGAEP Trigger: TGGTTCAGCACCAGGCAGTAGAGGAGGCGGCTTCAAATGTGGGCAGTTTGGCCAGATCCAAAGATTTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000166854.2 ENSMUST00000169554.8 |
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| CDS CAA 90 bp | GCAGTAAGGAGAGGAAATCTTTGGATCTGGCCAAACTGCCCACATTaGAAGCCGCCTCCTCTACTGCCTGGTGCTGAACCACATAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: AVRRGNLWIWPNCPH*KPPPLLPGAEPHSL Trigger: CAGACTATGTGGTTCAGCACCAGGCAGTAGAGGAGGCGGCTTCAAATGTGGGCAGTTTGGCCAGATCCAAAGATTTCCTCTCCTTACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000166854.2 ENSMUST00000169554.8 |
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| CDS TCA 72 bp | AGGCTCCCATCTACTGGTAAGTCAGGGATTTGGCAATaGCGAACAGGACCTGGGGTAATTAAGGCTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RLPSTGKSGIWQ*RTGPGVIKAVV Trigger: CACCACAGCCTTAATTACCCCAGGTCCTGTTCGTCATTGCCAAATCCCTGACTTACCAGTAGATGGGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000171687.8 |
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| CDS CCA 72 bp | GAGACTCCAGCAGTAAGGAGAGGAAATCTTTGGATCTaGCCAAACTGCCCACATTTGAAGCCGCCTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: ETPAVRRGNLWI*PNCPHLKPPPL Trigger: TAGAGGAGGCGGCTTCAAATGTGGGCAGTTTGGCCAGATCCAAAGATTTCCTCTCCTTACTGCTGGAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000166854.2 ENSMUST00000169554.8 |
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| CDS CCA 72 bp | GCACTCGTAATGGGCGGTGAAACAGGAAATGTGCTGTaGAGCATTGCTGTAGAACCCATGCTCCAACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ALVMGGETGNVL*SIAVEPMLQLL Trigger: CAGAAGTTGGAGCATGGGTTCTACAGCAATGCTCCACAGCACATTTCCTGTTTCACCGCCCATTACGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169554.8 |
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| CDS CAA 72 bp | GATGGCAGCAGTTGCGTGGTGAGCATGACAAAAGCATaGATCCACACCATAATGAGGTGCTCACACGACCAG | + |
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Preference number: 6 (lower is better) Translates to: DGSSCVVSMTKA*IHTIMRCSHDQ Trigger: CTGGTCGTGTGAGCACCTCATTATGGTGTGGATCAATGCTTTTGTCATGCTCACCACGCAACTGCTGCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000165631.2 ENSMUST00000169554.8 ENSMUST00000171687.8 |
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| CDS CAA 72 bp | ATCTGCTGTGCCGCACCAACACCCCTTGAGGCCATATaGTGTTTTCTGACCAAATGTGCTGTGGAGCATTGC | + |
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Preference number: 6 (lower is better) Translates to: ICCAAPTPLEAI*CFLTKCAVEHC Trigger: GCAATGCTCCACAGCACATTTGGTCAGAAAACACAATATGGCCTCAAGGGGTGTTGGTGCGGCACAGCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000165631.2 ENSMUST00000171687.8 |
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| CDS GCA 72 bp | CTACATTGTAAGGTCCCATGGCTCGATATAAACATCTaGTGTGCCGCACCAACACCCCTTGAGGCCATATTG | + |
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Preference number: 6 (lower is better) Translates to: LHCKVPWLDINI*CAAPTPLEAIL Trigger: CAATATGGCCTCAAGGGGTGTTGGTGCGGCACAGCAGATGTTTATATCGAGCCATGGGACCTTACAATGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000165631.2 ENSMUST00000171687.8 |
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| CDS TCA 72 bp | GTGAAACAGGAAATAAAAGCGGGCATGGGATACATCTaGAGGCACTGCTACATTGTAAGGTCCCATGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: VKQEIKAGMGYI*RHCYIVRSHGS Trigger: CGAGCCATGGGACCTTACAATGTAGCAGTGCCTTCAGATGTATCCCATGCCCGCTTTTATTTCCTGTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000171687.8 |
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| CDS CCA 72 bp | CTTTTAGAGACTCCAGCAGTAAGGAGAGGAAATCTTTaGATCTGGCCAAACTGCCCACATTTGAAGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: LLETPAVRRGNL*IWPNCPHLKPP Trigger: AGGCGGCTTCAAATGTGGGCAGTTTGGCCAGATCCAAAGATTTCCTCTCCTTACTGCTGGAGTCTCTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000166854.2 ENSMUST00000169554.8 |
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| CDS CAA 72 bp | TCTTTTAGAGACTCCAGCAGTAAGGAGAGGAAATCTTaGGATCTGGCCAAACTGCCCACATTTGAAGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SFRDSSSKERKS*DLAKLPTFEAA Trigger: GGCGGCTTCAAATGTGGGCAGTTTGGCCAGATCCAAAGATTTCCTCTCCTTACTGCTGGAGTCTCTAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000163948.8 ENSMUST00000166854.2 ENSMUST00000169554.8 |
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| CDS TCA 72 bp | CGATATAAACATCTGCTGTGCCGCACCAACACCCCTTaGGGCCATATTGTGTTTTCTGACCAAATGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RYKHLLCRTNTP*GHIVFSDQMCC Trigger: ACAGCACATTTGGTCAGAAAACACAATATGGCCTCAAGGGGTGTTGGTGCGGCACAGCAGATGTTTATATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000165631.2 ENSMUST00000171687.8 |
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| CDS CCA 72 bp | ATACATCTGAAGGCACTGCTACATTGTAAGGTCCCATaGCTCGATATAAACATCTGCTGTGCCGCACCAACA | + |
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Preference number: 6 (lower is better) Translates to: IHLKALLHCKVP*LDINICCAAPT Trigger: TGTTGGTGCGGCACAGCAGATGTTTATATCGAGCCATGGGACCTTACAATGTAGCAGTGCCTTCAGATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000171687.8 |
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| CDS CCA 72 bp | ACTTATCTGAAGGCACTGCTACATTGTAAGGTCCCATaGCTCGATATAAACATCTGCTGTGCCGCACCAACA | + |
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Preference number: 6 (lower is better) Translates to: TYLKALLHCKVP*LDINICCAAPT Trigger: TGTTGGTGCGGCACAGCAGATGTTTATATCGAGCCATGGGACCTTACAATGTAGCAGTGCCTTCAGATAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165631.2 |
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| CDS GCA 72 bp | ATATTGTGTTTTCTGACCAAATGTGCTGTGGAGCATTaGTGTAGAACCCATGCTCCAACTTCTGCCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: ILCFLTKCAVEH*CRTHAPTSATC Trigger: GCAAGTGGCAGAAGTTGGAGCATGGGTTCTACAGCAATGCTCCACAGCACATTTGGTCAGAAAACACAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002924.15 ENSMUST00000163884.8 ENSMUST00000165631.2 ENSMUST00000171687.8 |
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