Pregenerated sensors for TMEM38A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031791Ensembl transcript IDs: ENSMUST00000034244.9, ENSMUST00000211914.2, ENSMUST00000212763.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCAGGACCCCATGCTCACCTCTCTCAGGTGCCCTGGAGACTTTaGCGACCATGGCCCTTCCCCTGTATAAGGCTCGCTCCTAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PAGPHAHLSQVPWRL*RPWPFPCIRLAPKR Trigger: CCTCTTAGGAGCGAGCCTTATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAGGGCACCTGAGAGAGGTGAGCATGGGGTCCTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 90 bp | AGCCTGAGACCAGCAGGACCCCATGCTCACCTCTCTCAGGTGCCCTaGAGACTTTGGCGACCATGGCCCTTCCCCTGTATAAGGCTCGCT | + |
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Preference number: 1 (lower is better) Translates to: SLRPAGPHAHLSQVP*RLWRPWPFPCIRLA Trigger: AGCGAGCCTTATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAGGGCACCTGAGAGAGGTGAGCATGGGGTCCTGCTGGTCTCAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 90 bp | CTTTCTTGGTCTTCTTCTTCCTGGATCCTTCGCCCAGCTCTTCCTTaGCCTTGGCAGGCAGGCCGGAGTGCTGGGTGCCTAGTCCCATGC | + |
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Preference number: 1 (lower is better) Translates to: LSWSSSSWILRPALP*PWQAGRSAGCLVPC Trigger: GCATGGGACTAGGCACCCAGCACTCCGGCCTGCCTGCCAAGGCCAAGGAAGAGCTGGGCGAAGGATCCAGGAAGAAGAAGACCAAGAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR GCA 90 bp | CCAATTGTGAGTAACCAAGGCTGTTGGCTCTTGGACCCTCTGCTCTaGACCCACACCTCTTACCTGTGGGCACCTAGGAACTCAAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: PIVSNQGCWLLDPLL*THTSYLWAPRNSSP Trigger: GGGGCTTGAGTTCCTAGGTGCCCACAGGTAAGAGGTGTGGGTGCAGAGCAGAGGGTCCAAGAGCCAACAGCCTTGGTTACTCACAATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR GCA 90 bp | AAGACGAAAATGAGGCTGGCCTTGGACACTGGGAGCCAGCGAGTCTaGTGCAAGGTGAACAGGATGGCTCCATACAGACTGGCCTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: KTKMRLALDTGSQRV*CKVNRMAPYRLALV Trigger: CACCAAGGCCAGTCTGTATGGAGCCATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTTCGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR GCA 90 bp | ATGTGGTGCTCCATGGTTGTCATGGTGATGGTCGCCTCCCCAAGTTaGCCCAAACAGCACTGGGCAGATGTAACCCTCCAGGATATCAAA | + |
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Preference number: 1 (lower is better) Translates to: MWCSMVVMVMVASPS*PKQHWADVTLQDIK Trigger: TTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCACCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR CCA 90 bp | TGCTCAGCTGAGTATCTGGTGAGACCTTCTGGCCTCAAACACAAATaGCCTACATACCAAGCAGCCTGCCACTGTCCTTCATGCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: CSAEYLVRPSGLKHK*PTYQAACHCPSCCS Trigger: GGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGTTTGAGGCCAGAAGGTCTCACCAGATACTCAGCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 90 bp | CACCATAAACATGGTGAAGACGAAAATGAGGCTGGCCTTGGACACTaGGAGCCAGCGAGTCTGCTGCAAGGTGAACAGGATGGCTCCATA | + |
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Preference number: 1 (lower is better) Translates to: HHKHGEDENEAGLGH*EPASLLQGEQDGSI Trigger: TATGGAGCCATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTTCGTCTTCACCATGTTTATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR CCA 90 bp | GTTGTCATGGTGATGGTCGCCTCCCCAAGTTGCCCCAAACAGCACTaGGCAGATGTAACCCTCCAGGATATCAAATGGAGAACTGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: VVMVMVASPSCPKQH*ADVTLQDIKWRTVG Trigger: TCCCACAGTTCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR TCA 90 bp | GGGAGCTTCCAGCCTCAGGGCCTACCCTACCTCCAGGCAAAGTTATaGGGAGCATTTTCTCAACAAATGGGCTACACTGGGTACTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: GSFQPQGLPYLQAKL*GAFSQQMGYTGYFN Trigger: GTTGAAGTACCCAGTGTAGCCCATTTGTTGAGAAAATGCTCCTCATAACTTTGCCTGGAGGTAGGGTAGGCCCTGAGGCTGGAAGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR GCA 90 bp | CACAAATGGCCTACATACCAAGCAGCCTGCCACTGTCCTTCATGCTaGTCCAGTCTCCTTCTCACTAGCACGCTGCTTAAGCAACTGCTT | + |
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Preference number: 1 (lower is better) Translates to: HKWPTYQAACHCPSC*SSLLLTSTLLKQLL Trigger: AAGCAGTTGCTTAAGCAGCGTGCTAGTGAGAAGGAGACTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 90 bp | TGCCCCAAACAGCACTGGGCAGATGTAACCCTCCAGGATATCAAATaGAGAACTGTGGGAGTGTGTGGCTGTCAGGAACACAAGGACATG | + |
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Preference number: 1 (lower is better) Translates to: CPKQHWADVTLQDIK*RTVGVCGCQEHKDM Trigger: CATGTCCTTGTGTTCCTGACAGCCACACACTCCCACAGTTCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212763.2 |
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| 3UTR GCA 90 bp | AAACACAAATGGCCTACATACCAAGCAGCCTGCCACTGTCCTTCATaGTGCTCCAGTCTCCTTCTCACTAGCACGCTGCTTAAGCAACTG | + |
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Preference number: 1 (lower is better) Translates to: KHKWPTYQAACHCPS*CSSLLLTSTLLKQL Trigger: CAGTTGCTTAAGCAGCGTGCTAGTGAGAAGGAGACTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 90 bp | GTTTCTTTGAGTCCACATCCTTCTACCAAGCACGCAGTGGATTCCTaGGGCCAACCCCTAATCCGCTTTCTTGGTCTTCTTCTTCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: VSLSPHPSTKHAVDS*GQPLIRFLGLLLPG Trigger: TCCAGGAAGAAGAAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGCTTGGTAGAAGGATGTGGACTCAAAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR GCA 90 bp | CATGCTACAGAACAGAAACAGAAGGCTCAGAGAAGGAAGGCCATTTaGCTAAAGATGTCCAGCAGGAGTCACAAAATTCTAGGGAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: HATEQKQKAQRRKAI*LKMSSRSHKILGRS Trigger: GGACCTCCCTAGAATTTTGTGACTCCTGCTGGACATCTTTAGGCAAATGGCCTTCCTTCTCTGAGCCTTCTGTTTCTGTTCTGTAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 90 bp | TACCCTACCTCCAGGCAAAGTTATGAGGAGCATTTTCTCAACAAATaGGCTACACTGGGTACTTCAACTAGATCTGAGCCTCACATAAGC | + |
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Preference number: 1 (lower is better) Translates to: YPTSRQSYEEHFLNK*ATLGTSTRSEPHIS Trigger: GCTTATGTGAGGCTCAGATCTAGTTGAAGTACCCAGTGTAGCCCATTTGTTGAGAAAATGCTCCTCATAACTTTGCCTGGAGGTAGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CAA 90 bp | TTGGTCTTCTTCTTCCTGGATCCTTCGCCCAGCTCTTCCTTGGCCTaGGCAGGCAGGCCGGAGTGCTGGGTGCCTAGTCCCATGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: LVFFFLDPSPSSSLA*AGRPECWVPSPMPC Trigger: ACATGGCATGGGACTAGGCACCCAGCACTCCGGCCTGCCTGCCAAGGCCAAGGAAGAGCTGGGCGAAGGATCCAGGAAGAAGAAGACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR-3UTR TCA 90 bp | AATGAAAACCAAGAGCCTACCAGCCAGGGCTTTGGGCCTAGACTGTGTGCCCCCAAGGCTGTGACCTTTTaGGGGGTCTGGCAGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: NENQEPTSQGFGPRLCAPKAVTF*GVWQRA Trigger: TGCCCTCTGCCAGACCCCTCAAAAGGTCACAGCCTT...GGGGGCACACAGTCTAGGCCCAAAGCCCTGGCTGGTAGGCTCTTGGTTTTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR-3UTR CCA 90 bp | AATGAGGCTGGCCTTGGACACTGGGAGCCAGCGAGTCTGCTGCAAGGTGAACAGTGGCTCCATACAGACTaGCCTTGGTGGGGAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: NEAGLGHWEPASLLQGEQWLHTD*PWWGRT Trigger: TGTCCTTCCCCACCAAGGCCAGTCTGTATGGAGCCA...CTGTTCACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGCAGGAGTCACAAAATTCTAGGGAGGTCCTGAGTGCGGAAGGACATGGGGGAGGGTCTGAGCCCTaGATGCCCCTAAGTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: VQQESQNSREVLSAEGHGGGSEP*MPLSSE Trigger: CTCAGAACTTAGGGGCATTCAGGGCTCAGACCCTCC...CCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGGATTCCTGGGGCCAACCCCTAATCCGCTTTCTTGGTCTTCTTCTTCCTGGGGAGGGTCTGAGCCCTaGATGCCCCTAAGTTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SGFLGPTPNPLSWSSSSWGGSEP*MPLSSE Trigger: CTCAGAACTTAGGGGCATTCAGGGCTCAGACCCTCC...CCAGGAAGAAGAAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGCACGCAGTGGATTCCTGGGGCCAACCCCTAATCCGCTTTCTTGGTCTTTGCCCCAAACAGCACTaGGCAGATGTAACCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: TKHAVDSWGQPLIRFLGLCPKQH*ADVTLQ Trigger: CTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCA...AAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR CAA 90 bp | CATGTGGTGCTCCATGGTTGTCATGGTGATGGTCGCCTCCCCAAGTaGCCCCAAACAGCACTGGGCAGATGTAACCCTCCAGGATATCAA | + |
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Preference number: 2 (lower is better) Translates to: HVVLHGCHGDGRLPK*PQTALGRCNPPGYQ Trigger: TTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCACCACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGCACGCAGTGGATTCCTGGGGCCAACCCCTAATCCGCTTTCTTGGTCTTTCCCATGCCATGTGGTaGTCCATGGTTGTCATGGTG | + |
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Preference number: 2 (lower is better) Translates to: TKHAVDSWGQPLIRFLGLSHAMW*SMVVMV Trigger: CACCATGACAACCATGGAGCACCACATGGCATGGGA...AAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCATGGTTGTCATGGTGATGGTCGCCTCCCCAAGTTGCCCCAAACAGCACAACTGTGGGAGTGTGTaGCTGTCAGGAACACCTTAC | + |
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Preference number: 2 (lower is better) Translates to: CSMVVMVMVASPSCPKQHNCGSV*LSGTPY Trigger: GTAAGGTGTTCCTGACAGCCACACACTCCCACAGTT...GTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTGCCCCAAACAGCACTGGGCAGATGTAACCCTCCAGGATATCAAATGGAGAGGGAGCCAGCGAGTCTaGTGCAAGGTGAACAGGATG | + |
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Preference number: 2 (lower is better) Translates to: SCPKQHWADVTLQDIKWRGSQRV*CKVNRM Trigger: CATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCC...TCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR-3UTR CCA 90 bp | TACCAAGCACGCAGTGGATTCCTGGGGCCAACCCCTAATCCGCTTTCTTGGTCTTCAAATGGAGAACTGTaGGAGTGTGTGGCTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: YQARSGFLGPTPNPLSWSSNGEL*ECVAVR Trigger: CCTGACAGCCACACACTCCCACAGTTCTCCATTTGA...AGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGCTTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGATTCCTGGGGCCAACCCCTAATCCGCTTTCTTGGTCTTCTTCTTCCTGGAACTGTGGGAGTGTGTaGCTGTCAGGAACACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SGFLGPTPNPLSWSSSSWNCGSV*LSGTQG Trigger: TCCTTGTGTTCCTGACAGCCACACACTCCCACAGTT...CCAGGAAGAAGAAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212763.2 |
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| 3UTR CAA 90 bp | TTACATGACACCATAAACATGGTGAAGACGAAAATGAGGCTGGCCTaGGACACTGGGAGCCAGCGAGTCTGCTGCAAGGTGAACAGGATG | + |
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Preference number: 2 (lower is better) Translates to: LHDTINMVKTKMRLA*DTGSQRVCCKVNRM Trigger: CATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTTCGTCTTCACCATGTTTATGGTGTCATGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGCACGCAGTGGATTCCTGGGGCCAACCCCTAATCCGCTTTCTTGGTCTTCTCCAGGATATCAAATaGAGAACTGTGGGAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TKHAVDSWGQPLIRFLGLLQDIK*RTVGVC Trigger: ACACACTCCCACAGTTCTCCATTTGATATCCTGGAG...AAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR CAA 90 bp | ACTAGCACGCTGCTTAAGCAACTGCTTGAAATTATAAAGACCCTTTaGTACACAGGAGGACCTGGGGTCTCCATGCTACAGAACAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: TSTLLKQLLEIIKTL*YTGGPGVSMLQNRN Trigger: GTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATAATTTCAAGCAGTTGCTTAAGCAGCGTGCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR GCA 72 bp | CCCAGCTCTTCCTTGGCCTTGGCAGGCAGGCCGGAGTaGTGGGTGCCTAGTCCCATGCCATGTGGTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: PSSSLALAGRPE*WVPSPMPCGAP Trigger: TGGAGCACCACATGGCATGGGACTAGGCACCCAGCACTCCGGCCTGCCTGCCAAGGCCAAGGAAGAGCTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR GCA 72 bp | AGGCTGGCCTTGGACACTGGGAGCCAGCGAGTCTGCTaGAAGGTGAACAGGATGGCTCCATACAGACTGGCC | + |
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Preference number: 3 (lower is better) Translates to: RLALDTGSQRVC*KVNRMAPYRLA Trigger: GGCCAGTCTGTATGGAGCCATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR CCA 72 bp | CCCCATGCTCACCTCTCTCAGGTGCCCTGGAGACTTTaGCGACCATGGCCCTTCCCCTGTATAAGGCTCGCT | + |
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Preference number: 3 (lower is better) Translates to: PHAHLSQVPWRL*RPWPFPCIRLA Trigger: AGCGAGCCTTATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAGGGCACCTGAGAGAGGTGAGCATGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 72 bp | CCAGCAGGACCCCATGCTCACCTCTCTCAGGTGCCCTaGAGACTTTGGCGACCATGGCCCTTCCCCTGTATA | + |
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Preference number: 3 (lower is better) Translates to: PAGPHAHLSQVP*RLWRPWPFPCI Trigger: TATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAGGGCACCTGAGAGAGGTGAGCATGGGGTCCTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGTCCCATGCCATGTGGTGCTCCATGGTTGTCATGGTGATGGTCGCCTCCCCCCATACAGACTGGCCTaGGTGGGGAAGGACATGTGC | + |
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Preference number: 3 (lower is better) Translates to: LVPCHVVLHGCHGDGRLPPYRLA*VGKDMC Trigger: GCACATGTCCTTCCCCACCAAGGCCAGTCTGTATGG...GGGGAGGCGACCATCACCATGACAACCATGGAGCACCACATGGCATGGGACTAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTCCATGGTTGTCATGGTGATGGTCGCCTCCCCAAGTTGCCCCAAACAGCACAAAATGAGGCTGGCCTaGGACACTGGGAGCCAGCGA | + |
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Preference number: 3 (lower is better) Translates to: CSMVVMVMVASPSCPKQHKMRLA*DTGSQR Trigger: TCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTT...GTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR GCA 72 bp | ATGAGGCTGGCCTTGGACACTGGGAGCCAGCGAGTCTaGTGCAAGGTGAACAGGATGGCTCCATACAGACTG | + |
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Preference number: 3 (lower is better) Translates to: MRLALDTGSQRV*CKVNRMAPYRL Trigger: CAGTCTGTATGGAGCCATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR TCA 72 bp | AGTCCCATGCCATGTGGTGCTCCATGGTTGTCATGGTaGTGGTCGCCTCCCCAAGTTGCCCCAAACAGCACT | + |
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Preference number: 3 (lower is better) Translates to: SPMPCGAPWLSW*WSPPQVAPNST Trigger: AGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCACCACATGGCATGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR GCA 72 bp | TCCATGGTTGTCATGGTGATGGTCGCCTCCCCAAGTTaGCCCAAACAGCACTGGGCAGATGTAACCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SMVVMVMVASPS*PKQHWADVTLQ Trigger: CTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR GCA 72 bp | TGGCCTACATACCAAGCAGCCTGCCACTGTCCTTCATaGTGCTCCAGTCTCCTTCTCACTAGCACGCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: WPTYQAACHCPS*CSSLLLTSTLL Trigger: AAGCAGCGTGCTAGTGAGAAGGAGACTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 72 bp | CATGGTGAAGACGAAAATGAGGCTGGCCTTGGACACTaGGAGCCAGCGAGTCTGCTGCAAGGTGAACAGGAT | + |
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Preference number: 3 (lower is better) Translates to: HGEDENEAGLGH*EPASLLQGEQD Trigger: ATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTTCGTCTTCACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| 3UTR GCA 72 bp | CCTACATACCAAGCAGCCTGCCACTGTCCTTCATGCTaGTCCAGTCTCCTTCTCACTAGCACGCTGCTTAAG | + |
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Preference number: 3 (lower is better) Translates to: PTYQAACHCPSC*SSLLLTSTLLK Trigger: CTTAAGCAGCGTGCTAGTGAGAAGGAGACTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR GCA 72 bp | GGCCTCAAACACAAATGGCCTACATACCAAGCAGCCTaGCACTGTCCTTCATGCTGCTCCAGTCTCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: GLKHKWPTYQAA*HCPSCCSSLLL Trigger: GAGAAGGAGACTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGTTTGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR GCA 72 bp | CTCCTGTTAGCAGTCTGCCCTAAATGTGCCTGCTCATaGTCAGCTGAGTATCTGGTGAGACCTTCTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LLLAVCPKCACS*SAEYLVRPSGL Trigger: GAGGCCAGAAGGTCTCACCAGATACTCAGCTGAGCATGAGCAGGCACATTTAGGGCAGACTGCTAACAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 72 bp | GTGATGGTCGCCTCCCCAAGTTGCCCCAAACAGCACTaGGCAGATGTAACCCTCCAGGATATCAAATGGAGA | + |
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Preference number: 3 (lower is better) Translates to: VMVASPSCPKQH*ADVTLQDIKWR Trigger: TCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| 3UTR TCA 72 bp | CAGCCTCAGGGCCTACCCTACCTCCAGGCAAAGTTATaGGGAGCATTTTCTCAACAAATGGGCTACACTGGG | + |
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Preference number: 3 (lower is better) Translates to: QPQGLPYLQAKL*GAFSQQMGYTG Trigger: CCCAGTGTAGCCCATTTGTTGAGAAAATGCTCCTCATAACTTTGCCTGGAGGTAGGGTAGGCCCTGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| 3UTR CCA 72 bp | CAGCACTGGGCAGATGTAACCCTCCAGGATATCAAATaGAGAACTGTGGGAGTGTGTGGCTGTCAGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: QHWADVTLQDIK*RTVGVCGCQEH Trigger: GTGTTCCTGACAGCCACACACTCCCACAGTTCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
||
| 3UTR CCA 72 bp | AGTCCACATCCTTCTACCAAGCACGCAGTGGATTCCTaGGGCCAACCCCTAATCCGCTTTCTTGGTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPHPSTKHAVDS*GQPLIRFLGLL Trigger: AAGAAGACCAAGAAAGCGGATTAGGGGTTGGCCCCAGGAATCCACTGCGTGCTTGGTAGAAGGATGTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTTTCCACATCTGTTGAATTCCTCCACACTAATTTAGCCCACATCAGCCCTCTGCAGATGGGGAAGTaGAGGGTGGTAGAGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GFSTSVEFLHTNLAHISPLQMGK*RVVESR Trigger: CCTGCTCTCTACCACCCTCAACTTCCCCATCTGCAG...AGGGCTGATGTGGGCTAAATTAGTGTGGAGGAATTCAACAGATGTGGAAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR-3UTR CAA 90 bp | CAACTGCTTGAAATTATAAAGACCCTTTTGTACACAGGAGGACCTGGGGTCTCCAAAGGCTGTGACCTTTaGAGGGGTCTGGCAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QLLEIIKTLLYTGGPGVSKGCDL*RGLAEG Trigger: GCCCTCTGCCAGACCCCTCAAAAGGTCACAGCCTTT...GGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATAATTTCAAGCAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR CCA 72 bp | CCTCCAGGATATCAAATGGAGAACTGTGGGAGTGTGTaGCTGTCAGGAACACAAGGACATGTGCAGGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PPGYQMENCGSV*LSGTQGHVQDL Trigger: GAGATCCTGCACATGTCCTTGTGTTCCTGACAGCCACACACTCCCACAGTTCTCCATTTGATATCCTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212763.2 |
||
| 3UTR TCA 72 bp | CTAAATGTGCCTGCTCATGCTCAGCTGAGTATCTGGTaGGACCTTCTGGCCTCAAACACAAATGGCCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: LNVPAHAQLSIW*DLLASNTNGLH Trigger: ATGTAGGCCATTTGTGTTTGAGGCCAGAAGGTCTCACCAGATACTCAGCTGAGCATGAGCAGGCACATTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR CCA 72 bp | TCCAGGCAAAGTTATGAGGAGCATTTTCTCAACAAATaGGCTACACTGGGTACTTCAACTAGATCTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SRQSYEEHFLNK*ATLGTSTRSEP Trigger: AGGCTCAGATCTAGTTGAAGTACCCAGTGTAGCCCATTTGTTGAGAAAATGCTCCTCATAACTTTGCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR-3UTR CAA 90 bp | CTACCTCCAGGCAAAGTTATGAGGAGCATTTTCTCAACAAATGGGCTACACTGGGGTTTTCCACATCTGTaGAATTCCTCCACACTAATT | + |
|
Preference number: 3 (lower is better) Translates to: LPPGKVMRSIFSTNGLHWGFPHL*NSSTLI Trigger: AATTAGTGTGGAGGAATTCAACAGATGTGGAAAACC...CCAGTGTAGCCCATTTGTTGAGAAAATGCTCCTCATAACTTTGCCTGGAGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCCGGAGTGCTGGGTGCCTAGTCCCATGCCATGTGGTGCTCCATGGTTGCAGGACGCCACAGGGTaGCGCCGGGACAGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GRPECWVPSPMPCGAPWLQDATG*RRDSST Trigger: TGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTG...CAACCATGGAGCACCACATGGCATGGGACTAGGCACCCAGCACTCCGGCCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
||
| CDS-3UTR TCA 90 bp | AATGAAAACCAAGAGCCTACCAGCCAGGGCTTTGGGCCTAGACTGTGTGCCCCCGCACCCGCGAGAAGCTaGGCGCTAGCTCGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NENQEPTSQGFGPRLCAPAPARS*ALARPG Trigger: GCCTGGGCGAGCTAGCGCTCAGCTTCTCGCGGGTGC...GGGGGCACACAGTCTAGGCCCAAAGCCCTGGCTGGTAGGCTCTTGGTTTTCATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | TGCTCCATGGTTGTCATGGTGATGGTCGCCTCCCCAAGTTGCCCCAAACAGCACCAGGACGCCACAGGGTaGCGCCGGGACAGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSMVVMVMVASPSCPKQHQDATG*RRDSST Trigger: TGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTG...GTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGCAGGAGTCACAAAATTCTAGGGAGGTCCTGAGTGCGGAAGGACATGGGCAGGACGCCACAGGGTaGCGCCGGGACAGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VQQESQNSREVLSAEGHGQDATG*RRDSST Trigger: TGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTG...CCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR CAA 72 bp | ACCCCATGCTCACCTCTCTCAGGTGCCCTGGAGACTTaGGCGACCATGGCCCTTCCCCTGTATAAGGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPCSPLSGALET*ATMALPLYKAR Trigger: GCGAGCCTTATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAGGGCACCTGAGAGAGGTGAGCATGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR TCA 90 bp | TTGCCCCAAACAGCACTGGGCAGATGTAACCCTCCAGGATATCAAATGGAGAACGCACCCGCGAGAAGCTaGGCGCTAGCTCGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPQTALGRCNPPGYQMENAPARS*ALARPG Trigger: GCCTGGGCGAGCTAGCGCTCAGCTTCTCGCGGGTGC...GTTCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
||
| CDS-3UTR CCA 90 bp | ACACAAATGGCCTACATACCAAGCAGCCTGCCACTGTCCTTCATGCTGCTCCAGGGCAGGCCGGAGTGCTaGGTGCCTAGTCCCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQMAYIPSSLPLSFMLLQGRPEC*VPSPMP Trigger: TGGCATGGGACTAGGCACCCAGCACTCCGGCCTGCC...CTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR TCA 90 bp | AAACAGCACTGGGCAGATGTAACCCTCCAGGATATCAAATGGAGAACTGTGGGAGCACCCGCGAGAAGCTaGGCGCTAGCTCGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQHWADVTLQDIKWRTVGAPARS*ALARPG Trigger: GCCTGGGCGAGCTAGCGCTCAGCTTCTCGCGGGTGC...TCCCACAGTTCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
||
| CDS-3UTR GCA 90 bp | ACACAAATGGCCTACATACCAAGCAGCCTGCCACTGTCCTTCATGCTGCTCCAGGTCGCCTCCCCAAGTTaGCCCAAACAGCACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQMAYIPSSLPLSFMLLQVASPS*PKQHWA Trigger: TGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGAC...CTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR CAA 72 bp | CACAGAATGAAAACCAAGAGCCTACCAGCCAGGGCTTaGGGCCTAGACTGTGTGCCCCCAAAGGCTGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: HRMKTKSLPARA*GLDCVPPKAVT Trigger: GGTCACAGCCTTTGGGGGCACACAGTCTAGGCCCAAAGCCCTGGCTGGTAGGCTCTTGGTTTTCATTCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR CAA 72 bp | CTCCATGGTTGTCATGGTGATGGTCGCCTCCCCAAGTaGCCCCAAACAGCACTGGGCAGATGTAACCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHGCHGDGRLPK*PQTALGRCNPP Trigger: TGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
||
| CDS-3UTR GCA 90 bp | ACACAAATGGCCTACATACCAAGCAGCCTGCCACTGTCCTTCATGCTGCTCCAGGGGAGCCAGCGAGTCTaGTGCAAGGTGAACAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQMAYIPSSLPLSFMLLQGSQRV*CKVNRM Trigger: CATCCTGTTCACCTTGCAGCAGACTCGCTGGCTCCC...CTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | GTCCAGCAGGAGTCACAAAATTCTAGGGAGGTCCTGAGTGCGGAAGGACATGGGTGGCTCCATACAGACTaGCCTTGGTGGGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VQQESQNSREVLSAEGHGWLHTD*PWWGRT Trigger: TGTCCTTCCCCACCAAGGCCAGTCTGTATGGAGCCA...CCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | CAACTGCTTGAAATTATAAAGACCCTTTTGTACACAGGAGGACCTGGGGTCTCCCGCCCAGCTCTTCCTTaGCCTTGGCAGGCAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLEIIKTLLYTGGPGVSRPALP*PWQAGR Trigger: CCGGCCTGCCTGCCAAGGCCAAGGAAGAGCTGGGCG...GGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATAATTTCAAGCAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR CAA 72 bp | CAGAGCCCAATTGTGAGTAACCAAGGCTGTTGGCTCTaGGACCCTCTGCTCTGCACCCACACCTCTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSPIVSNQGCWL*DPLLCTHTSYL Trigger: CAGGTAAGAGGTGTGGGTGCAGAGCAGAGGGTCCAAGAGCCAACAGCCTTGGTTACTCACAATTGGGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR GCA 90 bp | GTCCAGCAGGAGTCACAAAATTCTAGGGAGGTCCTGAGTGCGGAAGGACATGGGTCCCATGCCATGTGGTaGTCCATGGTTGTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VQQESQNSREVLSAEGHGSHAMW*SMVVMV Trigger: CACCATGACAACCATGGAGCACCACATGGCATGGGA...CCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR CAA 72 bp | ACCATAAACATGGTGAAGACGAAAATGAGGCTGGCCTaGGACACTGGGAGCCAGCGAGTCTGCTGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TINMVKTKMRLA*DTGSQRVCCKV Trigger: CACCTTGCAGCAGACTCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTTCGTCTTCACCATGTTTATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
||
| CDS-3UTR GCA 90 bp | TTGCCCCAAACAGCACTGGGCAGATGTAACCCTCCAGGATATCAAATGGAGAACGGTGTGCGTGATGGATaGCCACAGCGATCTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPQTALGRCNPPGYQMENGVRDG*PQRSFG Trigger: TCCGAAAGATCGCTGTGGGCATCCATCACGCACACC...GTTCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212763.2 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTTTTGTACACAGGAGGACCTGGGGTCTCCATGCTACAGAACAGAAACACAGACTGGCCTTGGTaGGGAAGGACATGTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTLLYTGGPGVSMLQNRNTDWPW*GRTCAG Trigger: TCCTGCACATGTCCTTCCCCACCAAGGCCAGTCTGT...GTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTTTTGTACACAGGAGGACCTGGGGTCTCCATGCTACAGAACAGAAACTGCCCCAAACAGCACTaGGCAGATGTAACCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTLLYTGGPGVSMLQNRNCPKQH*ADVTLQ Trigger: CTGGAGGGTTACATCTGCCCAGTGCTGTTTGGGGCA...GTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR TCA 90 bp | AAGACCCTTTTGTACACAGGAGGACCTGGGGTCTCCATGCTACAGAACAGAAACGAGTCTGCTGCAAGGTaGACAGGATGGCTCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: KTLLYTGGPGVSMLQNRNESAAR*TGWLHT Trigger: TGTATGGAGCCATCCTGTTCACCTTGCAGCAGACTC...GTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | GTCCAGCAGGAGTCACAAAATTCTAGGGAGGTCCTGAGTGCGGAAGGACATGGGCTCCAGGATATCAAATaGAGAACTGTGGGAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQQESQNSREVLSAEGHGLQDIK*RTVGVC Trigger: ACACACTCCCACAGTTCTCCATTTGATATCCTGGAG...CCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR GCA 90 bp | CAACTGCTTGAAATTATAAAGACCCTTTTGTACACAGGAGGACCTGGGGTCTCCGGTGTGCGTGATGGATaGCCACAGCGATCTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLEIIKTLLYTGGPGVSGVRDG*PQRSFG Trigger: TCCGAAAGATCGCTGTGGGCATCCATCACGCACACC...GGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATAATTTCAAGCAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | AAACAGCACTGGGCAGATGTAACCCTCCAGGATATCAAATGGAGAACTGTGGGACAAAACAGTGCAACATaGCACACAGCCAGGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQHWADVTLQDIKWRTVGQNSAT*HTARTP Trigger: TGGCGTCCTGGCTGTGTGCCATGTTGCACTGTTTTG...TCCCACAGTTCTCCATTTGATATCCTGGAGGGTTACATCTGCCCAGTGCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211914.2 ENSMUST00000212763.2 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTTTTGTACACAGGAGGACCTGGGGTCTCCATGCTACAGAACAGAAACAACTGTGGGAGTGTGTaGCTGTCAGGAACACCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLLYTGGPGVSMLQNRNNCGSV*LSGTPY Trigger: GTAAGGTGTTCCTGACAGCCACACACTCCCACAGTT...GTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR TCA 90 bp | TGCCACTGTCCTTCATGCTGCTCCAGTCTCCTTCTCACTAGCACGCTGCTTAAGCAGGAACACCTTACATaGCACCATAAACATGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHCPSCCSSLLLTSTLLKQEHLT*HHKHGE Trigger: TTCACCATGTTTATGGTGTCATGTAAGGTGTTCCTG...CTTAAGCAGCGTGCTAGTGAGAAGGAGACTGGAGCAGCATGAAGGACAGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | GGGTTTTCCACATCTGTTGAATTCCTCCACACTAATTTAGCCCACATCAGCCCTCAAAACAGTGCAACATaGCACACAGCCAGGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFSTSVEFLHTNLAHISPQNSAT*HTARTP Trigger: TGGCGTCCTGGCTGTGTGCCATGTTGCACTGTTTTG...AGGGCTGATGTGGGCTAAATTAGTGTGGAGGAATTCAACAGATGTGGAAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | CAACTGCTTGAAATTATAAAGACCCTTTTGTACACAGGAGGACCTGGGGTCTCCTCAAATGGAGAACTGTaGGAGTGTGTGGCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLEIIKTLLYTGGPGVSSNGEL*ECVAVR Trigger: CCTGACAGCCACACACTCCCACAGTTCTCCATTTGA...GGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATAATTTCAAGCAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CCA 90 bp | GGGTTTTCCACATCTGTTGAATTCCTCCACACTAATTTAGCCCACATCAGCCCTTGGTCTTCTTCTTCCTaGATCCTTCGCCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFSTSVEFLHTNLAHISPWSSSS*ILRPAL Trigger: AAGAGCTGGGCGAAGGATCCAGGAAGAAGAAGACCA...AGGGCTGATGTGGGCTAAATTAGTGTGGAGGAATTCAACAGATGTGGAAAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| 3UTR CAA 72 bp | CTGCTTAAGCAACTGCTTGAAATTATAAAGACCCTTTaGTACACAGGAGGACCTGGGGTCTCCATGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLKQLLEIIKTL*YTGGPGVSMLQ Trigger: CTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTTTATAATTTCAAGCAGTTGCTTAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS CCA 90 bp | CAAGAAGCAGGTCGGCCAGGATGTAACTCCCAAAACAGTGCAACATaGCACACAGCCAGGACGCCACAGGGTGGCGCCGGGACAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QEAGRPGCNSQNSAT*HTARTPQGGAGTAP Trigger: TGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTGGCTGTGTGCCATGTTGCACTGTTTTGGGAGTTACATCCTGGCCGACCTGCTTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034244.9 ENSMUST00000211914.2 ENSMUST00000212763.2 |
||
| CDS-3UTR CAA 90 bp | ACACAAATGGCCTACATACCAAGCAGCCTGCCACTGTCCTTCATGCTGCTCCAGGGTCGCCTCCCCAAGTaGCCCCAAACAGCACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TQMAYIPSSLPLSFMLLQGRLPK*PQTALG Trigger: GCCCAGTGCTGTTTGGGGCAACTTGGGGAGGCGACC...CTGGAGCAGCATGAAGGACAGTGGCAGGCTGCTTGGTATGTAGGCCATTTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CAA 90 bp | CATGCCATGTGGTGCTCCATGGTTGTCATGGTGATGGTCGCCTCCCCAAGTTGCAGCAACTGTTCCACGTaGGACAGGAGGGCAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: HAMWCSMVVMVMVASPSCSNCST*DRRATP Trigger: TGGTGTTGCCCTCCTGTCCAACGTGGAACAGTTGCT...GCAACTTGGGGAGGCGACCATCACCATGACAACCATGGAGCACCACATGGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
||
| CDS-3UTR CAA 90 bp | GTCCAGCAGGAGTCACAAAATTCTAGGGAGGTCCTGAGTGCGGAAGGACATGGGCCATACAGACTGGCCTaGGTGGGGAAGGACATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VQQESQNSREVLSAEGHGPYRLA*VGKDMC Trigger: GCACATGTCCTTCCCCACCAAGGCCAGTCTGTATGG...CCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CAA 90 bp | AAGACCCTTTTGTACACAGGAGGACCTGGGGTCTCCATGCTACAGAACAGAAACGCAACACCAGACCCTTaGACCCACCCGGTGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: KTLLYTGGPGVSMLQNRNATPDP*THPVAI Trigger: GATCGCCACCGGGTGGGTCAAAGGGTCTGGTGTTGC...GTTTCTGTTCTGTAGCATGGAGACCCCAGGTCCTCCTGTGTACAAAAGGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CAA 90 bp | GTCCAGCAGGAGTCACAAAATTCTAGGGAGGTCCTGAGTGCGGAAGGACATGGGAGCAACTGTTCCACGTaGGACAGGAGGGCAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: VQQESQNSREVLSAEGHGSNCST*DRRATP Trigger: TGGTGTTGCCCTCCTGTCCAACGTGGAACAGTTGCT...CCCATGTCCTTCCGCACTCAGGACCTCCCTAGAATTTTGTGACTCCTGCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS CCA 90 bp | ACTGGCCTTGGTGGGGAAGGACATGTGCAGGATCTCATTAGTTTCTaGCTTCCAGACACCTCGAAGCAACTGTTCCACGTTGGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGLGGEGHVQDLISF*LPDTSKQLFHVGQE Trigger: CTCCTGTCCAACGTGGAACAGTTGCTTCGAGGTGTCTGGAAGCCAGAAACTAATGAGATCCTGCACATGTCCTTCCCCACCAAGGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS-3UTR CAA 90 bp | GGGTTTTCCACATCTGTTGAATTCCTCCACACTAATTTAGCCCACATCAGCCCTAAAATGAGGCTGGCCTaGGACACTGGGAGCCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GFSTSVEFLHTNLAHISPKMRLA*DTGSQR Trigger: TCGCTGGCTCCCAGTGTCCAAGGCCAGCCTCATTTT...AGGGCTGATGTGGGCTAAATTAGTGTGGAGGAATTCAACAGATGTGGAAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
||
| CDS CCA 72 bp | CAGTGCAACATGGCACACAGCCAGGACGCCACAGGGTaGCGCCGGGACAGCTCCACAGCTCCTGGCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: QCNMAHSQDATG*RRDSSTAPGSY Trigger: GTATGAGCCAGGAGCTGTGGAGCTGTCCCGGCGCCACCCTGTGGCGTCCTGGCTGTGTGCCATGTTGCACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034244.9 ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| CDS TCA 72 bp | GGTCGAAAACAGGGAAGAGCGGCACCCGCGAGAAGCTaGGCGCTAGCTCGCCCAGGCTCAGCGCTGACATCA | + |
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Preference number: 6 (lower is better) Translates to: GRKQGRAAPARS*ALARPGSALTS Trigger: TGATGTCAGCGCTGAGCCTGGGCGAGCTAGCGCTCAGCTTCTCGCGGGTGCCGCTCTTCCCTGTTTTCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034244.9 ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| CDS CCA 72 bp | GGTCGGCCAGGATGTAACTCCCAAAACAGTGCAACATaGCACACAGCCAGGACGCCACAGGGTGGCGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: GRPGCNSQNSAT*HTARTPQGGAG Trigger: CCCGGCGCCACCCTGTGGCGTCCTGGCTGTGTGCCATGTTGCACTGTTTTGGGAGTTACATCCTGGCCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034244.9 ENSMUST00000211914.2 ENSMUST00000212763.2 |
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| CDS CAA 72 bp | TGTTCCACGTTGGACAGGAGGGCAACACCAGACCCTTaGACCCACCCGGTGGCGATCATGATGAACCACCCG | + |
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Preference number: 6 (lower is better) Translates to: CSTLDRRATPDP*THPVAIMMNHP Trigger: CGGGTGGTTCATCATGATCGCCACCGGGTGGGTCAAAGGGTCTGGTGTTGCCCTCCTGTCCAACGTGGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| CDS CCA 72 bp | CTGGCTTCCAGACACCTCGAAGCAACTGTTCCACGTTaGACAGGAGGGCAACACCAGACCCACACTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LASRHLEATVPR*TGGQHQTHTPE Trigger: CTCTGGAGTGTGGGTCTGGTGTTGCCCTCCTGTCCAACGTGGAACAGTTGCTTCGAGGTGTCTGGAAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| CDS CAA 90 bp | TCATTAGTTTCTGGCTTCCAGACACCTCGAAGCAACTGTTCCACGTaGGACAGGAGGGCAACACCAGACCCTTTGACCCACCCGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SLVSGFQTPRSNCST*DRRATPDPLTHPVA Trigger: CGCCACCGGGTGGGTCAAAGGGTCTGGTGTTGCCCTCCTGTCCAACGTGGAACAGTTGCTTCGAGGTGTCTGGAAGCCAGAAACTAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| CDS CAA 72 bp | TCTGGCTTCCAGACACCTCGAAGCAACTGTTCCACGTaGGACAGGAGGGCAACACCAGACCCTTTGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: SGFQTPRSNCST*DRRATPDPLTH Trigger: GTGGGTCAAAGGGTCTGGTGTTGCCCTCCTGTCCAACGTGGAACAGTTGCTTCGAGGTGTCTGGAAGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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| CDS CAA 72 bp | TCTGGCTTCCAGACACCTCGAAGCAACTGTTCCACGTaGGACAGGAGGGCAACACCAGACCCACACTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGFQTPRSNCST*DRRATPDPHSR Trigger: TCTGGAGTGTGGGTCTGGTGTTGCCCTCCTGTCCAACGTGGAACAGTTGCTTCGAGGTGTCTGGAAGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211914.2 |
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| CDS CCA 72 bp | GGTGGGGAAGGACATGTGCAGGATCTCATTAGTTTCTaGCTTCCAGACACCTCGAAGCAACTGTTCCACGTT | + |
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Preference number: 6 (lower is better) Translates to: GGEGHVQDLISF*LPDTSKQLFHV Trigger: AACGTGGAACAGTTGCTTCGAGGTGTCTGGAAGCCAGAAACTAATGAGATCCTGCACATGTCCTTCCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034244.9 |
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