RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM37 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050777

Ensembl transcript IDs: ENSMUST00000056089.8

Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTAACCTATCCAGCTCACTGTGCCGTCGTACAGAGGCACCCTTCTaGCTTTGCCCTGGAGCTCAGCTGAAGAGACTTCCAGGGCATTGC +
Preference number: 1 (lower is better)
Translates to: TNLSSSLCRRTEAPF*LCPGAQLKRLPGHC
Trigger: GCAATGCCCTGGAAGTCTCTTCAGCTGAGCTCCAGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGAGCTGGATAGGTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR CCA 90 bp CAGCTCACTGTGCCGTCGTACAGAGGCACCCTTCTGCCTTTGCCCTaGAGCTCAGCTGAAGAGACTTCCAGGGCATTGCTAGAGCTAAGT +
Preference number: 1 (lower is better)
Translates to: QLTVPSYRGTLLPLP*SSAEETSRALLELS
Trigger: ACTTAGCTCTAGCAATGCCCTGGAAGTCTCTTCAGCTGAGCTCCAGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR TCA 90 bp ATTTTAGGATACTCTCCTTACTTTCAAATTGAGATTTTAATAGCATaGCTAACCTATCCAGCTCACTGTGCCGTCGTACAGAGGCACCCT +
Preference number: 1 (lower is better)
Translates to: ILGYSPYFQIEILIA*LTYPAHCAVVQRHP
Trigger: AGGGTGCCTCTGTACGACGGCACAGTGAGCTGGATAGGTTAGTCATGCTATTAAAATCTCAATTTGAAAGTAAGGAGAGTATCCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR CAA 90 bp CCTATCCAGCTCACTGTGCCGTCGTACAGAGGCACCCTTCTGCCTTaGCCCTGGAGCTCAGCTGAAGAGACTTCCAGGGCATTGCTAGAG +
Preference number: 2 (lower is better)
Translates to: PIQLTVPSYRGTLLP*PWSSAEETSRALLE
Trigger: CTCTAGCAATGCCCTGGAAGTCTCTTCAGCTGAGCTCCAGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGAGCTGGATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR-3UTR CCA 90 bp GTCTCTTTCAAACCCTATTCCAGTCAGGGAAGAAAACACCGTAGGAAGACATTTCAGTGTCAAGGTCATTaGTTGTCCTATTCAATCTCA +
Preference number: 2 (lower is better)
Translates to: VSFKPYSSQGRKHRRKTFQCQGH*LSYSIS
Trigger: TGAGATTGAATAGGACAACCAATGACCTTGACACTG...AAATGTCTTCCTACGGTGTTTTCTTCCCTGACTGGAATAGGGTTTGAAAGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR GCA 72 bp TCACTGTGCCGTCGTACAGAGGCACCCTTCTGCCTTTaGCCTGGAGCTCAGCTGAAGAGACTTCCAGGGCAT +
Preference number: 3 (lower is better)
Translates to: SLCRRTEAPFCL*PGAQLKRLPGH
Trigger: ATGCCCTGGAAGTCTCTTCAGCTGAGCTCCAGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR GCA 72 bp TCCAGCTCACTGTGCCGTCGTACAGAGGCACCCTTCTaGCTTTGCCCTGGAGCTCAGCTGAAGAGACTTCCA +
Preference number: 3 (lower is better)
Translates to: SSSLCRRTEAPF*LCPGAQLKRLP
Trigger: TGGAAGTCTCTTCAGCTGAGCTCCAGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR TCA 72 bp CAGAGGCACCCTTCTGCCTTTGCCCTGGAGCTCAGCTaGAGAGACTTCCAGGGCATTGCTAGAGCTAAGTGC +
Preference number: 3 (lower is better)
Translates to: QRHPSAFALELS*RDFQGIARAKC
Trigger: GCACTTAGCTCTAGCAATGCCCTGGAAGTCTCTTCAGCTGAGCTCCAGGGCAAAGGCAGAAGGGTGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR GCA 72 bp GATTTTAATAGCATGACTAACCTATCCAGCTCACTGTaGCGTCGTACAGAGGCACCCTTCTGCCTTTGCCCT +
Preference number: 3 (lower is better)
Translates to: DFNSMTNLSSSL*RRTEAPFCLCP
Trigger: AGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGAGCTGGATAGGTTAGTCATGCTATTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR TCA 72 bp TACTCTCCTTACTTTCAAATTGAGATTTTAATAGCATaGCTAACCTATCCAGCTCACTGTGCCGTCGTACAG +
Preference number: 3 (lower is better)
Translates to: YSPYFQIEILIA*LTYPAHCAVVQ
Trigger: CTGTACGACGGCACAGTGAGCTGGATAGGTTAGTCATGCTATTAAAATCTCAATTTGAAAGTAAGGAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS-3UTR CCA 90 bp ACCTATCCAGCTCACTGTGCCGTCGTACAGAGGCACCCTTCTGCCTTTGCCCTGCCGGGCATATGGGCCTaGCTCAGGTCTCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: TYPAHCAVVQRHPSAFALPGIWA*LRSLRQ
Trigger: CTGTCTGAGAGACCTGAGCCAGGCCCATATGCCCGG...CAGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGAGCTGGATAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
3UTR CAA 72 bp CTCACTGTGCCGTCGTACAGAGGCACCCTTCTGCCTTaGCCCTGGAGCTCAGCTGAAGAGACTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LTVPSYRGTLLP*PWSSAEETSRA
Trigger: TGCCCTGGAAGTCTCTTCAGCTGAGCTCCAGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS-3UTR TCA 90 bp AGCTCACTGTGCCGTCGTACAGAGGCACCCTTCTGCCTTTGCCCTGGAGCTCAGATCGCAGATGGAGACTaGAGAAAGGACCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSLCRRTEAPFCLCPGAQIADGD*RKDHSQ
Trigger: CTGGCTGTGGTCCTTTCTTCAGTCTCCATCTGCGAT...CTGAGCTCCAGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS-3UTR GCA 90 bp TCTGGAACTGACTTTTGGTCTCTTTCAAACCCTATTCCAGTCAGGGAAGAAAACGATGGCAGCCACCACTaGCATGGCGGCCACACTGCG +
Preference number: 4 (lower is better)
Translates to: SGTDFWSLSNPIPVREENDGSHH*HGGHTA
Trigger: CGCAGTGTGGCCGCCATGGCAGTGGTGGCTGCCATC...GTTTTCTTCCCTGACTGGAATAGGGTTTGAAAGAGACCAAAAGTCAGTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS-3UTR TCA 90 bp GTCTCTTTCAAACCCTATTCCAGTCAGGGAAGAAAACACCGTAGGAAGACATTTGTGAGGCTGTTGATGTaGAGGCCGCTGGCGGCATTG +
Preference number: 4 (lower is better)
Translates to: VSFKPYSSQGRKHRRKTFVRLLM*RPLAAL
Trigger: CAATGCCGCCAGCGGCCTTCACATCAACAGCCTCAC...AAATGTCTTCCTACGGTGTTTTCTTCCCTGACTGGAATAGGGTTTGAAAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS-3UTR TCA 90 bp GGAACTGACTTTTGGTCTCTTTCAAACCCTATTCCAGTCAGGGAAGAAAACACCCACAGCCCAAAGAGATaGTCCTCCACTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GTDFWSLSNPIPVREENTHSPKR*SSTRSQ
Trigger: CTGGCTCCTAGTGGAGGATCATCTCTTTGGGCTGTG...GGTGTTTTCTTCCCTGACTGGAATAGGGTTTGAAAGAGACCAAAAGTCAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS-3UTR CCA 90 bp CTGGAACTGACTTTTGGTCTCTTTCAAACCCTATTCCAGTCAGGGAAGAAAACAAGTGGCCATCGCAGATaGAGACTGAAGAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: LELTFGLFQTLFQSGKKTSGHRR*RLKKGP
Trigger: TGGTCCTTTCTTCAGTCTCCATCTGCGATGGCCACT...TGTTTTCTTCCCTGACTGGAATAGGGTTTGAAAGAGACCAAAAGTCAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS-3UTR CCA 90 bp CTGGAACTGACTTTTGGTCTCTTTCAAACCCTATTCCAGTCAGGGAAGAAAACAGTCTCTCAGACAGTGTaGTTCACTGTGGTTGCCGAT +
Preference number: 4 (lower is better)
Translates to: LELTFGLFQTLFQSGKKTVSQTV*FTVVAD
Trigger: ATCGGCAACCACAGTGAACCACACTGTCTGAGAGAC...TGTTTTCTTCCCTGACTGGAATAGGGTTTGAAAGAGACCAAAAGTCAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS-3UTR CCA 90 bp GTCTCTTTCAAACCCTATTCCAGTCAGGGAAGAAAACACCGTAGGAAGACATTTACATCTTCACACACCTaGGACACAATGAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: VSFKPYSSQGRKHRRKTFTSSHT*DTMSIS
Trigger: GGAGATGCTCATTGTGTCCCAGGTGTGTGAAGATGT...AAATGTCTTCCTACGGTGTTTTCTTCCCTGACTGGAATAGGGTTTGAAAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 90 bp TCTCCAAGCCGAAGATGGCAGCCACCACTGCCATGGCGGCCACACTaGGTGCTAGGCCCATGCCTACAGCCAGCCCGGGCATATGGGCCT +
Preference number: 5 (lower is better)
Translates to: SPSRRWQPPLPWRPH*VLGPCLQPARAYGP
Trigger: AGGCCCATATGCCCGGGCTGGCTGTAGGCATGGGCCTAGCACGCAGTGTGGCCGCCATGGCAGTGGTGGCTGCCATCTTCGGCTTGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 90 bp CTGCGTGCTAGGCCCATGCCTACAGCCAGCCCGGGCATATGGGCCTaGCTCAGGTCTCTCAGACAGTGTGGTTCACTGTGGTTGCCGATG +
Preference number: 5 (lower is better)
Translates to: LRARPMPTASPGIWA*LRSLRQCGSLWLPM
Trigger: CATCGGCAACCACAGTGAACCACACTGTCTGAGAGACCTGAGCCAGGCCCATATGCCCGGGCTGGCTGTAGGCATGGGCCTAGCACGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 90 bp GCCACACTGCGTGCTAGGCCCATGCCTACAGCCAGCCCGGGCATATaGGCCTGGCTCAGGTCTCTCAGACAGTGTGGTTCACTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ATLRARPMPTASPGI*AWLRSLRQCGSLWL
Trigger: CAACCACAGTGAACCACACTGTCTGAGAGACCTGAGCCAGGCCCATATGCCCGGGCTGGCTGTAGGCATGGGCCTAGCACGCAGTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS-3UTR CAA 90 bp ACCTATCCAGCTCACTGTGCCGTCGTACAGAGGCACCCTTCTGCCTTTGCCCTGAGGCCGCTGGCGGCATaGAGGAAGAAGAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: TYPAHCAVVQRHPSAFALRPLAA*RKKRKE
Trigger: CTCCTTCCTCTTCTTCCTCAATGCCGCCAGCGGCCT...CAGGGCAAAGGCAGAAGGGTGCCTCTGTACGACGGCACAGTGAGCTGGATAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 90 bp AGCCAGCCCGGGCATATGGGCCTGGCTCAGGTCTCTCAGACAGTGTaGTTCACTGTGGTTGCCGATGGTGCAGAAGTACCACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: SQPGHMGLAQVSQTV*FTVVADGAEVPQPK
Trigger: TTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGTGAACCACACTGTCTGAGAGACCTGAGCCAGGCCCATATGCCCGGGCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 90 bp CAGAGAAGTCCCATCATAACCTCGCTTTCTGTAAGCCAGGGTCCCTaGTGGAGGGTCCCAGGGCTGAGTGAGGCTGTTGATGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QRSPIITSLSVSQGP*WRVPGLSEAVDVKA
Trigger: GGCCTTCACATCAACAGCCTCACTCAGCCCTGGGACCCTCCAGCAGGGACCCTGGCTTACAGAAAGCGAGGTTATGATGGGACTTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS TCA 90 bp AAAGGCAACCAGGAGGAGGTAGGAACCGATGGCCCACTTGCGCCGTaGGCGGACATCTTCACACACCTGGGACACAATGAGCATCTCCAA +
Preference number: 5 (lower is better)
Translates to: KGNQEEVGTDGPLAP*ADIFTHLGHNEHLQ
Trigger: TTGGAGATGCTCATTGTGTCCCAGGTGTGTGAAGATGTCCGCTCACGGCGCAAGTGGGCCATCGGTTCCTACCTCCTCCTGGTTGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 90 bp GGCTCAGGTCTCTCAGACAGTGTGGTTCACTGTGGTTGCCGATGGTaGAGAAGTACCACAGCCCAAAGAGATGATCCTCCACTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: GSGLSDSVVHCGCRW*RSTTAQRDDPPLGA
Trigger: GGCTCCTAGTGGAGGATCATCTCTTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGTGAACCACACTGTCTGAGAGACCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS TCA 90 bp TCACTGTGGTTGCCGATGGTGCAGAAGTACCACAGCCCAAAGAGATaGTCCTCCACTAGGAGCCAGTGGCCATCGCAGATGGAGACTGAA +
Preference number: 5 (lower is better)
Translates to: SLWLPMVQKYHSPKR*SSTRSQWPSQMETE
Trigger: TTCAGTCTCCATCTGCGATGGCCACTGGCTCCTAGTGGAGGATCATCTCTTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 90 bp TATGGGCCTGGCTCAGGTCTCTCAGACAGTGTGGTTCACTGTGGTTaGCGATGGTGCAGAAGTACCACAGCCCAAAGAGATGATCCTCCA +
Preference number: 5 (lower is better)
Translates to: YGPGSGLSDSVVHCG*RWCRSTTAQRDDPP
Trigger: TGGAGGATCATCTCTTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGTGAACCACACTGTCTGAGAGACCTGAGCCAGGCCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 72 bp CCACTGCCATGGCGGCCACACTGCGTGCTAGGCCCATaGCTACAGCCAGCCCGGGCATATGGGCCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: PLPWRPHCVLGP*LQPARAYGPGS
Trigger: TGAGCCAGGCCCATATGCCCGGGCTGGCTGTAGGCATGGGCCTAGCACGCAGTGTGGCCGCCATGGCAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 72 bp CGAAGATGGCAGCCACCACTGCCATGGCGGCCACACTaGGTGCTAGGCCCATGCCTACAGCCAGCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: RRWQPPLPWRPH*VLGPCLQPARA
Trigger: TGCCCGGGCTGGCTGTAGGCATGGGCCTAGCACGCAGTGTGGCCGCCATGGCAGTGGTGGCTGCCATCTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 72 bp GCATCTCCAAGCCGAAGATGGCAGCCACCACTGCCATaGCGGCCACACTGCGTGCTAGGCCCATGCCTACAG +
Preference number: 6 (lower is better)
Translates to: ASPSRRWQPPLP*RPHCVLGPCLQ
Trigger: CTGTAGGCATGGGCCTAGCACGCAGTGTGGCCGCCATGGCAGTGGTGGCTGCCATCTTCGGCTTGGAGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 72 bp AGGCCCATGCCTACAGCCAGCCCGGGCATATGGGCCTaGCTCAGGTCTCTCAGACAGTGTGGTTCACTGTGG +
Preference number: 6 (lower is better)
Translates to: RPMPTASPGIWA*LRSLRQCGSLW
Trigger: CCACAGTGAACCACACTGTCTGAGAGACCTGAGCCAGGCCCATATGCCCGGGCTGGCTGTAGGCATGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 72 bp CGTGCTAGGCCCATGCCTACAGCCAGCCCGGGCATATaGGCCTGGCTCAGGTCTCTCAGACAGTGTGGTTCA +
Preference number: 6 (lower is better)
Translates to: RARPMPTASPGI*AWLRSLRQCGS
Trigger: TGAACCACACTGTCTGAGAGACCTGAGCCAGGCCCATATGCCCGGGCTGGCTGTAGGCATGGGCCTAGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 72 bp AGGCAACCAGGAGGAGGTAGGAACCGATGGCCCACTTaGGCCGTGAGCGGACATCTTCACACACCTGGGACA +
Preference number: 6 (lower is better)
Translates to: RQPGGGRNRWPT*AVSGHLHTPGT
Trigger: TGTCCCAGGTGTGTGAAGATGTCCGCTCACGGCGCAAGTGGGCCATCGGTTCCTACCTCCTCCTGGTTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS TCA 72 bp GCCGTGAGCGGACATCTTCACACACCTGGGACACAATaGGCATCTCCAAGCCGAAGATGGCAGCCACCACTG +
Preference number: 6 (lower is better)
Translates to: AVSGHLHTPGTQ*ASPSRRWQPPL
Trigger: CAGTGGTGGCTGCCATCTTCGGCTTGGAGATGCTCATTGTGTCCCAGGTGTGTGAAGATGTCCGCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 72 bp CCCATCATAACCTCGCTTTCTGTAAGCCAGGGTCCCTaGTGGAGGGTCCCAGGGCTGAGTGAGGCTGTTGAT +
Preference number: 6 (lower is better)
Translates to: PIITSLSVSQGP*WRVPGLSEAVD
Trigger: ATCAACAGCCTCACTCAGCCCTGGGACCCTCCAGCAGGGACCCTGGCTTACAGAAAGCGAGGTTATGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 72 bp GCCCACTTGCGCCGTGAGCGGACATCTTCACACACCTaGGACACAATGAGCATCTCCAAGCCGAAGATGGCA +
Preference number: 6 (lower is better)
Translates to: AHLRRERTSSHT*DTMSISKPKMA
Trigger: TGCCATCTTCGGCTTGGAGATGCTCATTGTGTCCCAGGTGTGTGAAGATGTCCGCTCACGGCGCAAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 72 bp GCCTGGCTCAGGTCTCTCAGACAGTGTGGTTCACTGTaGTTGCCGATGGTGCAGAAGTACCACAGCCCAAAG +
Preference number: 6 (lower is better)
Translates to: AWLRSLRQCGSL*LPMVQKYHSPK
Trigger: CTTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGTGAACCACACTGTCTGAGAGACCTGAGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 72 bp GGGCATATGGGCCTGGCTCAGGTCTCTCAGACAGTGTaGTTCACTGTGGTTGCCGATGGTGCAGAAGTACCA +
Preference number: 6 (lower is better)
Translates to: GHMGLAQVSQTV*FTVVADGAEVP
Trigger: TGGTACTTCTGCACCATCGGCAACCACAGTGAACCACACTGTCTGAGAGACCTGAGCCAGGCCCATATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS TCA 72 bp TTGCCGATGGTGCAGAAGTACCACAGCCCAAAGAGATaGTCCTCCACTAGGAGCCAGTGGCCATCGCAGATG +
Preference number: 6 (lower is better)
Translates to: LPMVQKYHSPKR*SSTRSQWPSQM
Trigger: CATCTGCGATGGCCACTGGCTCCTAGTGGAGGATCATCTCTTTGGGCTGTGGTACTTCTGCACCATCGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 72 bp GGCTCAGGTCTCTCAGACAGTGTGGTTCACTGTGGTTaGCGATGGTGCAGAAGTACCACAGCCCAAAGAGAT +
Preference number: 6 (lower is better)
Translates to: GSGLSDSVVHCG*RWCRSTTAQRD
Trigger: ATCTCTTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGTGAACCACACTGTCTGAGAGACCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CAA 72 bp TGGCTCAGGTCTCTCAGACAGTGTGGTTCACTGTGGTaGCCGATGGTGCAGAAGTACCACAGCCCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: WLRSLRQCGSLW*PMVQKYHSPKR
Trigger: TCTCTTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGTGAACCACACTGTCTGAGAGACCTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS GCA 72 bp CTCTCAGACAGTGTGGTTCACTGTGGTTGCCGATGGTaGAGAAGTACCACAGCCCAAAGAGATGATCCTCCA +
Preference number: 6 (lower is better)
Translates to: LSDSVVHCGCRW*RSTTAQRDDPP
Trigger: TGGAGGATCATCTCTTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGTGAACCACACTGTCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8
CDS CCA 72 bp GGTCTCTCAGACAGTGTGGTTCACTGTGGTTGCCGATaGTGCAGAAGTACCACAGCCCAAAGAGATGATCCT +
Preference number: 6 (lower is better)
Translates to: GLSDSVVHCGCR*CRSTTAQRDDP
Trigger: AGGATCATCTCTTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGTGAACCACACTGTCTGAGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056089.8