Pregenerated sensors for TMEM35A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033578Ensembl transcript IDs: ENSMUST00000037687.8
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGATAAACAATCAAAGGAAAACACACACACACACGCACACACACTaGTGTCATCTTGGGTGTCAAGGAAGCAACCGCCTAGAAGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: KINNQRKTHTHTHTH*CHLGCQGSNRLEGP Trigger: TGGACCTTCTAGGCGGTTGCTTCCTTGACACCCAAGATGACATCAGTGTGTGTGCGTGTGTGTGTGTGTTTTCCTTTGATTGTTTATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR GCA 90 bp | CTCAATAGTAGCCATATACATGTACATGCAGCAAGATGTGAGTGTTaGTCCAGAGGAATTAAAGGTGGTACACGAATGTCAATGTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: LNSSHIHVHAARCEC*SRGIKGGTRMSMWG Trigger: TCCCCACATTGACATTCGTGTACCACCTTTAATTCCTCTGGAGCAACACTCACATCTTGCTGCATGTACATGTATATGGCTACTATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR TCA 90 bp | AATGAGCAAAAGAAGACAAGTATCAATTACCAAGAACAATGGCACTaGAGAAATACAGTAAGCACTCTCCCTAGACACAAACCCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: NEQKKTSINYQEQWH*RNTVSTLPRHKPTP Trigger: GGGGGTGGGTTTGTGTCTAGGGAGAGTGCTTACTGTATTTCTTCAGTGCCATTGTTCTTGGTAATTGATACTTGTCTTCTTTTGCTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR GCA 90 bp | GCAGTTAAATACATTGCCCCACACATAATCTCACAGTCACATGCTTaGTGGAGTCCATCTCACAAATACAACTCAATAGTAGCCATATAC | + |
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Preference number: 1 (lower is better) Translates to: AVKYIAPHIISQSHA*WSPSHKYNSIVAIY Trigger: GTATATGGCTACTATTGAGTTGTATTTGTGAGATGGACTCCAGCAAGCATGTGACTGTGAGATTATGTGTGGGGCAATGTATTTAACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR CCA 90 bp | GTTAAATACATTGCCCCACACATAATCTCACAGTCACATGCTTGCTaGAGTCCATCTCACAAATACAACTCAATAGTAGCCATATACATG | + |
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Preference number: 1 (lower is better) Translates to: VKYIAPHIISQSHAC*SPSHKYNSIVAIYM Trigger: CATGTATATGGCTACTATTGAGTTGTATTTGTGAGATGGACTCCAGCAAGCATGTGACTGTGAGATTATGTGTGGGGCAATGTATTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR CCA 90 bp | ATTTCTAGGGGGTGTTTTGGAGTTGTTAACTTTAGCAAAGTTGGGTaGGGAATCAATAGGTGTAGAGAACTCTTCATACAGATAAATACT | + |
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Preference number: 1 (lower is better) Translates to: ISRGCFGVVNFSKVG*GINRCRELFIQINT Trigger: AGTATTTATCTGTATGAAGAGTTCTCTACACCTATTGATTCCCCACCCAACTTTGCTAAAGTTAACAACTCCAAAACACCCCCTAGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGTGGGGAAACTTCAGCTCCTGGGTGGCTACTGAGAATGGTAAAGTGGGGCACACGCACACACACTaGTGTCATCTTGGGTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: KQWGNFSSWVATENGKVGHTHTH*CHLGCQ Trigger: TTGACACCCAAGATGACATCAGTGTGTGTGCGTGTG...CCCCACTTTACCATTCTCAGTAGCCACCCAGGAGCTGAAGTTTCCCCACTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR CCA 90 bp | CCAACTAACCCAAGTCAAATGTCCCTCCCCCAGCTAAACTCCACCCTCTGGAACACTTCAGCTCCTGGGTaGCTACTGAGAATGGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: PTNPSQMSLPQLNSTLWNTSAPG*LLRMVK Trigger: CTTTACCATTCTCAGTAGCCACCCAGGAGCTGAAGT...GTTCCAGAGGGTGGAGTTTAGCTGGGGGAGGGACATTTGACTTGGGTTAGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCGACCCCTCCCACTGCATCACTTGAAGGATCAAACTAGGTCATTTGTTCAGTCACATGCTTGCTaGAGTCCATCTCACAAATAC | + |
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Preference number: 2 (lower is better) Translates to: ARRPLPLHHLKDQTRSFVQSHAC*SPSHKY Trigger: GTATTTGTGAGATGGACTCCAGCAAGCATGTGACTG...AACAAATGACCTAGTTTGATCCTTCAAGTGATGCAGTGGGAGGGGTCGCCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR CCA 90 bp | ATACTGCCTACAGCTTCTCCATCCAGTTGCAGGTTTCAGAAAACCACTAGGGTTGGAAACTTCAGCTCCTaGGTGGCTACTGAGAATGGT | + |
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Preference number: 2 (lower is better) Translates to: ILPTASPSSCRFQKTTRVGNFSS*VATENG Trigger: ACCATTCTCAGTAGCCACCCAGGAGCTGAAGTTTCC...AACCCTAGTGGTTTTCTGAAACCTGCAACTGGATGGAGAAGCTGTAGGCAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR TCA 90 bp | ATACTGCCTACAGCTTCTCCATCCAGTTGCAGGTTTCAGAAAACCACTAGGGTTACATGCAGCAAGATGTaGGTGTTGCTCCAGAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: ILPTASPSSCRFQKTTRVTCSKM*VLLQRN Trigger: ATTCCTCTGGAGCAACACTCACATCTTGCTGCATGT...AACCCTAGTGGTTTTCTGAAACCTGCAACTGGATGGAGAAGCTGTAGGCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCCATCCAGTTGCAGGTTTCAGAAAACCACTAGGGTTGGAGATTGAAACTACACGAATGTCAATGTaGGGAGGTCATTTTAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LLHPVAGFRKPLGLEIETTRMSM*GGHFRV Trigger: TACCCTAAAATGACCTCCCCACATTGACATTCGTGT...AGTTTCAATCTCCAACCCTAGTGGTTTTCTGAAACCTGCAACTGGATGGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTTTCCACCAGGAAACAACTCTCTTTAGGAGACAGTTCTTATCTGGAATCAATCTCACAGTCACATaGTTGCTGGAGTCCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: FVFHQETTLFRRQFLSGINLTVT*LLESIS Trigger: TGAGATGGACTCCAGCAAGCATGTGACTGTGAGATT...GATTCCAGATAAGAACTGTCTCCTAAAGAGAGTTGTTTCCTGGTGGAAAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATCTCACAAATACAACTCAATAGTAGCCATATACATGTACATGCAGCAAGAACACTGATGTCATCTTaGGTGTCAAGGAAGCAACCG | + |
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Preference number: 2 (lower is better) Translates to: SISQIQLNSSHIHVHAARTLMSS*VSRKQP Trigger: CGGTTGCTTCCTTGACACCCAAGATGACATCAGTGT...TCTTGCTGCATGTACATGTATATGGCTACTATTGAGTTGTATTTGTGAGATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR CCA 72 bp | GTCCCTCAGTGGAAGCAGTGGGGAAACTTCAGCTCCTaGGTGGCTACTGAGAATGGTAAAGTGGGGCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: VPQWKQWGNFSS*VATENGKVGLL Trigger: AAGCAGCCCCACTTTACCATTCTCAGTAGCCACCCAGGAGCTGAAGTTTCCCCACTGCTTCCACTGAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR CCA 72 bp | CTCAGTGGAAGCAGTGGGGAAACTTCAGCTCCTGGGTaGCTACTGAGAATGGTAAAGTGGGGCTGCTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: LSGSSGETSAPG*LLRMVKWGCFV Trigger: CACAAAGCAGCCCCACTTTACCATTCTCAGTAGCCACCCAGGAGCTGAAGTTTCCCCACTGCTTCCACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR CCA 72 bp | GGGTTGGAGATTGAAACTTGTACCAGGACCAATCCCTaGTCCCTCAGTGGAAGCAGTGGGGAAACTTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GLEIETCTRTNP*SLSGSSGETSA Trigger: AGCTGAAGTTTCCCCACTGCTTCCACTGAGGGACCAGGGATTGGTCCTGGTACAAGTTTCAATCTCCAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR TCA 72 bp | AGACAAAGGCAAGGCGACCCCTCCCACTGCATCACTTaGAGGATCAAACTAGGTCATTTGTTTTCCACCAGG | + |
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Preference number: 3 (lower is better) Translates to: RQRQGDPSHCIT*RIKLGHLFSTR Trigger: CCTGGTGGAAAACAAATGACCTAGTTTGATCCTTCAAGTGATGCAGTGGGAGGGGTCGCCTTGCCTTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR CAA 90 bp | AAAAGGTTACTAAAGAGCTCAATAGCTTGTACTCAGACAAAGGCAAGGCGACCCCTCACAGTCACATGCTaGCTGGAGTCCATCTCACAA | + |
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Preference number: 3 (lower is better) Translates to: KRLLKSSIACTQTKARRPLTVTC*LESISQ Trigger: TTGTGAGATGGACTCCAGCAAGCATGTGACTGTGAG...GGGTCGCCTTGCCTTTGTCTGAGTACAAGCTATTGAGCTCTTTAGTAACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGTGGGGAAACTTCAGCTCCTGGGTGGCTACTGAGAATGGTAAAGTGGGGATCAAACTAGGTCATTaGTTTTCCACCAGGAAACAA | + |
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Preference number: 3 (lower is better) Translates to: KQWGNFSSWVATENGKVGIKLGH*FSTRKQ Trigger: TTGTTTCCTGGTGGAAAACAAATGACCTAGTTTGAT...CCCCACTTTACCATTCTCAGTAGCCACCCAGGAGCTGAAGTTTCCCCACTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR TCA 72 bp | AATCAAAGGAAAACACACACACACACGCACACACACTaGTGTCATCTTGGGTGTCAAGGAAGCAACCGCCTA | + |
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Preference number: 3 (lower is better) Translates to: NQRKTHTHTHTH*CHLGCQGSNRL Trigger: TAGGCGGTTGCTTCCTTGACACCCAAGATGACATCAGTGTGTGTGCGTGTGTGTGTGTGTTTTCCTTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR CCA 72 bp | ACTTCAGCTCCTGGGTGGCTACTGAGAATGGTAAAGTaGGGCTGCTTTGTGCTTAAAACAAAAGTTGACTGT | + |
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Preference number: 3 (lower is better) Translates to: TSAPGWLLRMVK*GCFVLKTKVDC Trigger: ACAGTCAACTTTTGTTTTAAGCACAAAGCAGCCCCACTTTACCATTCTCAGTAGCCACCCAGGAGCTGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR CCA 72 bp | ATTGCCCCACACATAATCTCACAGTCACATGCTTGCTaGAGTCCATCTCACAAATACAACTCAATAGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: IAPHIISQSHAC*SPSHKYNSIVA Trigger: GGCTACTATTGAGTTGTATTTGTGAGATGGACTCCAGCAAGCATGTGACTGTGAGATTATGTGTGGGGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR-3UTR CAA 90 bp | ATTTCCATACTGGTCAATCCAACTAACCCAAGTCAAATGTCCCTCCCCCAGCTATTTCTAGGGGGTGTTTaGGAGTTGTTAACTTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: ISILVNPTNPSQMSLPQLFLGGV*ELLTLA Trigger: TGCTAAAGTTAACAACTCCAAAACACCCCCTAGAAA...TAGCTGGGGGAGGGACATTTGACTTGGGTTAGTTGGATTGACCAGTATGGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR GCA 72 bp | TACATTGCCCCACACATAATCTCACAGTCACATGCTTaGTGGAGTCCATCTCACAAATACAACTCAATAGTA | + |
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Preference number: 3 (lower is better) Translates to: YIAPHIISQSHA*WSPSHKYNSIV Trigger: TACTATTGAGTTGTATTTGTGAGATGGACTCCAGCAAGCATGTGACTGTGAGATTATGTGTGGGGCAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR CCA 72 bp | ACAGCAGTATGTAACTACAAAAGCAAATTTCCATACTaGTCAATCCAACTAACCCAAGTCAAATGTCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: TAVCNYKSKFPY*SIQLTQVKCPS Trigger: GGAGGGACATTTGACTTGGGTTAGTTGGATTGACCAGTATGGAAATTTGCTTTTGTAGTTACATACTGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR TCA 72 bp | AAGAAGACAAGTATCAATTACCAAGAACAATGGCACTaGAGAAATACAGTAAGCACTCTCCCTAGACACAAA | + |
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Preference number: 3 (lower is better) Translates to: KKTSINYQEQWH*RNTVSTLPRHK Trigger: TTTGTGTCTAGGGAGAGTGCTTACTGTATTTCTTCAGTGCCATTGTTCTTGGTAATTGATACTTGTCTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR GCA 90 bp | AAGCAGTGGGGAAACTTCAGCTCCTGGGTGGCTACTGAGAATGGTAAAGTGGGGATCTGTCTTCAGGCTTaGGGGCAATCAGCAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KQWGNFSSWVATENGKVGICLQA*GQSAGG Trigger: GCCGCCTGCTGATTGCCCGCAAGCCTGAAGACAGAT...CCCCACTTTACCATTCTCAGTAGCCACCCAGGAGCTGAAGTTTCCCCACTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR CCA 90 bp | CCAACTAACCCAAGTCAAATGTCCCTCCCCCAGCTAAACTCCACCCTCTGGAACAGTTGGCCACATCTTTaGGACGACCGGGTACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PTNPSQMSLPQLNSTLWNSWPHL*DDRVPG Trigger: CCCTGGTACCCGGTCGTCCCAAAGATGTGGCCAACT...GTTCCAGAGGGTGGAGTTTAGCTGGGGGAGGGACATTTGACTTGGGTTAGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR CCA 90 bp | GCAAGGCGACCCCTCCCACTGCATCACTTGAAGGATCAAACTAGGTCATTTGTTGGATCACCCACCAGCTaGTGGAAGAAGAGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: ARRPLPLHHLKDQTRSFVGSPTS*WKKSTA Trigger: GGCTGTGCTCTTCTTCCACCAGCTGGTGGGTGATCC...AACAAATGACCTAGTTTGATCCTTCAAGTGATGCAGTGGGAGGGGTCGCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR TCA 90 bp | TGCCCCACACATAATCTCACAGTCACATGCTTGCTGGAGTCCATCTCACAAATACGGGTACCAGGGTCATaGCAATGCCACAGGCCACTT | + |
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Preference number: 4 (lower is better) Translates to: CPTHNLTVTCLLESISQIRVPGS*QCHRPL Trigger: AAGTGGCCTGTGGCATTGTCATGACCCTGGTACCCG...TATTTGTGAGATGGACTCCAGCAAGCATGTGACTGTGAGATTATGTGTGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR TCA 90 bp | ATACTGCCTACAGCTTCTCCATCCAGTTGCAGGTTTCAGAAAACCACTAGGGTTTCAGCAGGCGGCAGGTaGGCAGGATTCCAAACACCA | + |
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Preference number: 4 (lower is better) Translates to: ILPTASPSSCRFQKTTRVSAGGR*AGFQTP Trigger: TGGTGTTTGGAATCCTGCTCACCTGCCGCCTGCTGA...AACCCTAGTGGTTTTCTGAAACCTGCAACTGGATGGAGAAGCTGTAGGCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR TCA 90 bp | ATTTCCATACTGGTCAATCCAACTAACCCAAGTCAAATGTCCCTCCCCCAGCTAGAGTCCCAGGGCCACTaGGAGGGCCATGATAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: ISILVNPTNPSQMSLPQLESQGH*EGHDSY Trigger: ATAACTATCATGGCCCTCTCAGTGGCCCTGGGACTC...TAGCTGGGGGAGGGACATTTGACTTGGGTTAGTTGGATTGACCAGTATGGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGTTACTAAAGAGCTCAATAGCTTGTACTCAGACAAAGGCAAGGCGACCCGGATGGTTGCTCCTCTaGACTCTCAGGCAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KRLLKSSIACTQTKARRPGWLLL*TLRQGL Trigger: AAGGCCTTGCCTGAGAGTGCAGAGGAGCAACCATCC...GGGTCGCCTTGCCTTTGTCTGAGTACAAGCTATTGAGCTCTTTAGTAACCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR CCA 90 bp | ATTTCCATACTGGTCAATCCAACTAACCCAAGTCAAATGTCCCTCCCCCAGCTAAGAGCAGGAAGAAGTTaGCCACATCTTTGGGACGAC | + |
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Preference number: 4 (lower is better) Translates to: ISILVNPTNPSQMSLPQLRAGRS*PHLWDD Trigger: GTCGTCCCAAAGATGTGGCCAACTTCTTCCTGCTCT...TAGCTGGGGGAGGGACATTTGACTTGGGTTAGTTGGATTGACCAGTATGGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR TCA 90 bp | ATTTCCATACTGGTCAATCCAACTAACCCAAGTCAAATGTCCCTCCCCCAGCTAGAAGGAGGATGGAATTaGTGCCCATTTTCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ISILVNPTNPSQMSLPQLEGGWN*CPFSSA Trigger: TGCTGAAGAAAATGGGCATCAATTCCATCCTCCTTC...TAGCTGGGGGAGGGACATTTGACTTGGGTTAGTTGGATTGACCAGTATGGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR TCA 90 bp | TCCATCTCACAAATACAACTCAATAGTAGCCATATACATGTACATGCAGCAAGACATGGGCGTAGCGTTTaGGAGGATCACCCACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SISQIQLNSSHIHVHAARHGRSV*EDHPPA Trigger: AGCTGGTGGGTGATCCTCTCAAACGCTACGCCCATG...TCTTGCTGCATGTACATGTATATGGCTACTATTGAGTTGTATTTGTGAGATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR CCA 90 bp | TTTGTTTTCCACCAGGAAACAACTCTCTTTAGGAGACAGTTCTTATCTGGAATCACCTTCACTTTGCCCTaGGGGGCCTTCTCATACAAG | + |
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Preference number: 4 (lower is better) Translates to: FVFHQETTLFRRQFLSGITFTLP*GAFSYK Trigger: CTTGTATGAGAAGGCCCCCCAGGGCAAAGTGAAGGT...GATTCCAGATAAGAACTGTCTCCTAAAGAGAGTTGTTTCCTGGTGGAAAACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| 3UTR CAA 72 bp | ATACATTGCCCCACACATAATCTCACAGTCACATGCTaGCTGGAGTCCATCTCACAAATACAACTCAATAGT | + |
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Preference number: 4 (lower is better) Translates to: IHCPTHNLTVTC*LESISQIQLNS Trigger: ACTATTGAGTTGTATTTGTGAGATGGACTCCAGCAAGCATGTGACTGTGAGATTATGTGTGGGGCAATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS TCA 90 bp | GGAAGAAGTTGGCCACATCTTTGGGACGACCGGGTACCAGGGTCATaGCAATGCCACAGGCCACTTCAAGAGCACCAATACTTTTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: GRSWPHLWDDRVPGS*QCHRPLQEHQYFSE Trigger: TTCGGAAAAGTATTGGTGCTCTTGAAGTGGCCTGTGGCATTGTCATGACCCTGGTACCCGGTCGTCCCAAAGATGTGGCCAACTTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR CAA 90 bp | TGCCCCACACATAATCTCACAGTCACATGCTTGCTGGAGTCCATCTCACAAATAGATCTGTCTTCAGGCTaGCGGGCAATCAGCAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: CPTHNLTVTCLLESISQIDLSSG*RAISRR Trigger: CCGCCTGCTGATTGCCCGCAAGCCTGAAGACAGATC...TATTTGTGAGATGGACTCCAGCAAGCATGTGACTGTGAGATTATGTGTGGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS TCA 90 bp | AGGCCACTTCAAGAGCACCAATACTTTTCCGAAGGAGGATGGAATTaGTGCCCATTTTCTTCAGCAGAGGAAGGGCTCGAACGTAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: RPLQEHQYFSEGGWN*CPFSSAEEGLERSS Trigger: AGAGCTACGTTCGAGCCCTTCCTCTGCTGAAGAAAATGGGCATCAATTCCATCCTCCTTCGGAAAAGTATTGGTGCTCTTGAAGTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS-3UTR CAA 90 bp | ACTGTGTCTAGTAAAAGGTTACTAAAGAGCTCAATAGCTTGTACTCAGACAAAGAAGTTGGCCACATCTTaGGGACGACCGGGTACCAGG | + |
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Preference number: 5 (lower is better) Translates to: TVSSKRLLKSSIACTQTKKLATS*GRPGTR Trigger: CCTGGTACCCGGTCGTCCCAAAGATGTGGCCAACTT...CTTTGTCTGAGTACAAGCTATTGAGCTCTTTAGTAACCTTTTACTAGACACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS CAA 90 bp | AGCACAGCCAACACCAGCAAGAGCAGGAAGAAGTTGGCCACATCTTaGGGACGACCGGGTACCAGGGTCATGACAATGCCACAGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: STANTSKSRKKLATS*GRPGTRVMTMPQAT Trigger: AGTGGCCTGTGGCATTGTCATGACCCTGGTACCCGGTCGTCCCAAAGATGTGGCCAACTTCTTCCTGCTCTTGCTGGTGTTGGCTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS CCA 72 bp | AGAGCACAGCCAACACCAGCAAGAGCAGGAAGAAGTTaGCCACATCTTTGGGACGACCGGGTACCAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RAQPTPARAGRS*PHLWDDRVPGS Trigger: TGACCCTGGTACCCGGTCGTCCCAAAGATGTGGCCAACTTCTTCCTGCTCTTGCTGGTGTTGGCTGTGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS CAA 72 bp | AAGAGCACAGCCAACACCAGCAAGAGCAGGAAGAAGTaGGCCACATCTTTGGGACGACCGGGTACCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: KSTANTSKSRKK*ATSLGRPGTRV Trigger: GACCCTGGTACCCGGTCGTCCCAAAGATGTGGCCAACTTCTTCCTGCTCTTGCTGGTGTTGGCTGTGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS CAA 72 bp | GGCAAGGCCTTCTTCTCAGAAGATCTGTCTTCAGGCTaGCGGGCAATCAGCAGGCGGCAGGTGAGCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: GKAFFSEDLSSG*RAISRRQVSRI Trigger: AATCCTGCTCACCTGCCGCCTGCTGATTGCCCGCAAGCCTGAAGACAGATCTTCTGAGAAGAAGGCCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS TCA 72 bp | TGGCCACATCTTTGGGACGACCGGGTACCAGGGTCATaGCAATGCCACAGGCCACTTCAAGAGCACCAATAC | + |
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Preference number: 6 (lower is better) Translates to: WPHLWDDRVPGS*QCHRPLQEHQY Trigger: GTATTGGTGCTCTTGAAGTGGCCTGTGGCATTGTCATGACCCTGGTACCCGGTCGTCCCAAAGATGTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS TCA 72 bp | GCAGGATTCCAAACACCAGAGCATGGGCGTAGCGTTTaGGAGGATCACCCACCAGCTGGTGGAAGAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: AGFQTPEHGRSV*EDHPPAGGRRA Trigger: TGCTCTTCTTCCACCAGCTGGTGGGTGATCCTCTCAAACGCTACGCCCATGCTCTGGTGTTTGGAATCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS CAA 72 bp | AACACCAGCAAGAGCAGGAAGAAGTTGGCCACATCTTaGGGACGACCGGGTACCAGGGTCATGACAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: NTSKSRKKLATS*GRPGTRVMTMP Trigger: TGGCATTGTCATGACCCTGGTACCCGGTCGTCCCAAAGATGTGGCCAACTTCTTCCTGCTCTTGCTGGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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| CDS TCA 72 bp | CAAGAGCACCAATACTTTTCCGAAGGAGGATGGAATTaGTGCCCATTTTCTTCAGCAGAGGAAGGGCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: QEHQYFSEGGWN*CPFSSAEEGLE Trigger: TTCGAGCCCTTCCTCTGCTGAAGAAAATGGGCATCAATTCCATCCTCCTTCGGAAAAGTATTGGTGCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037687.8 |
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