Pregenerated sensors for TMEM30C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022753Ensembl transcript IDs: ENSMUST00000023434.15, ENSMUST00000119407.8, ENSMUST00000120112.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATCTTTaGGTCTATCACTCCATTGTCTGCTGCTGCCTTCTGCTCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SLRWLRNSSSFARDL*VYHSIVCCCLLLFF Trigger: GAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR CAA 90 bp | CTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATCTTaGGGTCTATCACTCCATTGTCTGCTGCTGCCTTCTGCTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LLEVAQELFKLCQGS*GLSLHCLLLPSALL Trigger: AAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR-3UTR GCA 90 bp | CACTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATCTTTGGTCCATTGTCTGCTGCTaGCTTCTGCTCTTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HSSLRWLRNSSSFARDLWSIVCC*LLLFFS Trigger: AGAGAAGAAGAGCAGAAGGCAGCAGCAGACAATGGA...CCAAAGATCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR-3UTR GCA 90 bp | AATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATATCACTCCATTGTCTaGTGCTGCCTTCTGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: NPALLLEVAQELFKLCQGYHSIV*CCLLLF Trigger: GAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATA...TCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTAGGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCACTCCATTGTCTGCTaGTGCCTTCTGCTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VVRIILDSINPALLLEVAHSIVC*CLLLFF Trigger: GAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTG...AGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCCTAACTAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR-3UTR CCA 90 bp | GGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACTTTGCCAGGGATCTTTaGGTCTATCACTCCATTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GLYWIPSIQHSSLRWLRNFARDL*VYHSIV Trigger: GACAATGGAGTGATAGACCCAAAGATCCCTGGCAAA...GTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR CAA 90 bp | GTAAGGAAGAAATATTGTTGCCATCAGGAATCTGCACAAACAAATTaGGTCACACCAACCCTCAGGTGTTCTTCCACAATTGATAACTCC | + |
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Preference number: 2 (lower is better) Translates to: VRKKYCCHQESAQTN*VTPTLRCSSTIDNS Trigger: GGAGTTATCAATTGTGGAAGAACACCTGAGGGTTGGTGTGACCAAATTTGTTTGTGCAGATTCCTGATGGCAACAATATTTCTTCCTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| 3UTR CCA 72 bp | CACTTGGGAGACAGAGGCAAGAGGTTAGGGCCAGCCTaGTCTACAGAGGGAGTTCTAGGACAGCCAGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: HLGDRGKRLGPA*STEGVLGQPGL Trigger: TAACCCTGGCTGTCCTAGAACTCCCTCTGTAGACCAGGCTGGCCCTAACCTCTTGCCTCTGTCTCCCAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| 3UTR GCA 72 bp | CTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTaGCAGGGATCTTTGGGTCTATCACTCCATTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: LLLEVAQELFKL*QGSLGLSLHCL Trigger: CAGACAATGGAGTGATAGACCCAAAGATCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR-3UTR CAA 90 bp | TTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACTCTGGGTCTATCACTCCATaGTCTGCTGCTGCCTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: LYWIPSIQHSSLRWLRNSGSITP*SAAAFC Trigger: GCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCC...AGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR TCA 72 bp | GATTATATTGGATTCCATCAATCCAGCACTCCTCCTTaGGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: DYIGFHQSSTPP*GGSGTLQALPG Trigger: CCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR GCA 72 bp | GCCAGGGATCTTTGGGTCTATCACTCCATTGTCTGCTaGTGCCTTCTGCTCTTCTTCTCTTTAAATCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: ARDLWVYHSIVC*CLLLFFSLNLD Trigger: GTCCAGATTTAAAGAGAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR CCA 72 bp | TATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTaGCTCAGGAACTCTTCAAGCTTTGCCAGGGATCTT | + |
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Preference number: 3 (lower is better) Translates to: YWIPSIQHSSLR*LRNSSSFARDL Trigger: AAGATCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR GCA 72 bp | AGGGATCTTTGGGTCTATCACTCCATTGTCTGCTGCTaGCTTCTGCTCTTCTTCTCTTTAAATCTGGACACC | + |
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Preference number: 3 (lower is better) Translates to: RDLWVYHSIVCC*LLLFFSLNLDT Trigger: GGTGTCCAGATTTAAAGAGAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR GCA 72 bp | TTTGCCAGGGATCTTTGGGTCTATCACTCCATTGTCTaGTGCTGCCTTCTGCTCTTCTTCTCTTTAAATCTG | + |
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Preference number: 3 (lower is better) Translates to: FARDLWVYHSIV*CCLLLFFSLNL Trigger: CAGATTTAAAGAGAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCCCTGGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR CCA 72 bp | CAAGACAAGCTGTTTCACAGTGTTCCACCTATCTGCTaGGAGGACACACACAGAATAAAAGAATTCTACAAC | + |
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Preference number: 3 (lower is better) Translates to: QDKLFHSVPPIC*EDTHRIKEFYN Trigger: GTTGTAGAATTCTTTTATTCTGTGTGTGTCCTCCCAGCAGATAGGTGGAACACTGTGAAACAGCTTGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGAAATATTGTTGCCATCAGGAATCTGCACAAACAAATTTGGTCACACCAACGGTGTTCTTCCACAATaGATAACTCCTTTTAAAACC | + |
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Preference number: 3 (lower is better) Translates to: EEILLPSGICTNKFGHTNGVLPQ*ITPFKT Trigger: GGTTTTAAAAGGAGTTATCAATTGTGGAAGAACACC...GTTGGTGTGACCAAATTTGTTTGTGCAGATTCCTGATGGCAACAATATTTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR GCA 90 bp | CACTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATCTTTGGGGCCAACAGCGTCAGTaGCCCCGTCACTGTGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: HSSLRWLRNSSSFARDLWGQQRQ*PRHCVS Trigger: ACTTACACAGTGACGGGGGCACTGACGCTGTTGGCC...CCAAAGATCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR GCA 90 bp | CCTGAATGGAAGGGGCGGTGCTTTCCCCTCGCGGGCATTCCTACAAGACAAGCTCGTTTGCTGTTTCAATaGTGTGTTTTCTGGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: PEWKGRCFPLAGIPTRQARLLFQ*CVFWQS Trigger: AGACTGCCAGAAAACACAGCATTGAAACAGCAAACG...AGCTTGTCTTGTAGGAATGCCCGCGAGGGGAAAGCACCGCCCCTTCCATTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR GCA 90 bp | TGCTTTCCCCTCGCGGGCATTCCTACAAGACAAGCTGTTTCACAGTGTTCCACCGCAGATAGATTTAGCTaGTGGGTGGGCAACGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: CFPLAGIPTRQAVSQCSTADRFS*WVGNVC Trigger: GCAAACGTTGCCCACCCAGCAGCTAAATCTATCTGC...GGTGGAACACTGTGAAACAGCTTGTCTTGTAGGAATGCCCGCGAGGGGAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR GCA 90 bp | AAGGGGCGGTGCTTTCCCCTCGCGGGCATTCCTACAAGACAAGCTGTTTCACAGTATGCTGTTGGCAATTaGACCACAAGGAATGATGGG | + |
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Preference number: 4 (lower is better) Translates to: KGRCFPLAGIPTRQAVSQYAVGN*TTRNDG Trigger: CCCATCATTCCTTGTGGTGCAATTGCCAACAGCATA...CTGTGAAACAGCTTGTCTTGTAGGAATGCCCGCGAGGGGAAAGCACCGCCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATCTTTGGGTTGTTTTCTGGCAGTCTaGACAGGTCATACTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLEVAQELFKLCQGSLGCFLAV*TGHTGA Trigger: TGCCCCAGTATGACCTGTCCAGACTGCCAGAAAACA...ACCCAAAGATCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR TCA 90 bp | AAGGGGCGGTGCTTTCCCCTCGCGGGCATTCCTACAAGACAAGCTGTTTCACAGTTGGATTCCGAAATTTaGCATACTTATCTGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: KGRCFPLAGIPTRQAVSQLDSEI*HTYLST Trigger: GGTGGACAGATAAGTATGTCAAATTTCGGAATCCAA...CTGTGAAACAGCTTGTCTTGTAGGAATGCCCGCGAGGGGAAAGCACCGCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR CCA 90 bp | CACTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATCTTTGGCAATGCTGTGTTTTCTaGCAGTCTGGACAGGTCATA | + |
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Preference number: 4 (lower is better) Translates to: HSSLRWLRNSSSFARDLWQCCVF*QSGQVI Trigger: TATGACCTGTCCAGACTGCCAGAAAACACAGCATTG...CCAAAGATCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | AAGGGGCGGTGCTTTCCCCTCGCGGGCATTCCTACAAGACAAGCTGTTTCACAGTCCTTACCCACCAATTaGCTATTGCTTCTTGATAAG | + |
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Preference number: 4 (lower is better) Translates to: KGRCFPLAGIPTRQAVSQSLPTN*LLLLDK Trigger: CTTATCAAGAAGCAATAGCCAATTGGTGGGTAAGGA...CTGTGAAACAGCTTGTCTTGTAGGAATGCCCGCGAGGGGAAAGCACCGCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR TCA 90 bp | CTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATCTTTGGGTCTTTTCAGCATCAAGTaGATCGTCAGGATGGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LLLEVAQELFKLCQGSLGLFSIK*IVRMAK Trigger: TTTTGCCATCCTGACGATTCACTTGATGCTGAAAAG...ACCCAAAGATCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR GCA 90 bp | GGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACGCAGATAGATTTAGCTaGTGGGTGGGCAACGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: GLYWIPSIQHSSLRWLRNADRFS*WVGNVC Trigger: GCAAACGTTGCCCACCCAGCAGCTAAATCTATCTGC...GTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| 3UTR CAA 72 bp | GGATTATATTGGATTCCATCAATCCAGCACTCCTCCTaGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GLYWIPSIQHSS*RWLRNSSSFAR Trigger: CCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR TCA 90 bp | AATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATTGGATTCCGAAATTTaGCATACTTATCTGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: NPALLLEVAQELFKLCQGLDSEI*HTYLST Trigger: GGTGGACAGATAAGTATGTCAAATTTCGGAATCCAA...TCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR GCA 90 bp | AATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATTTCTTGGTGCTCTTTaGAGACAACAGAAGGATGAT | + |
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Preference number: 4 (lower is better) Translates to: NPALLLEVAQELFKLCQGFLGAL*RQQKDD Trigger: ATCATCCTTCTGTTGTCTGCAAAGAGCACCAAGAAA...TCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR GCA 90 bp | GGGATCTTTGGGTCTATCACTCCATTGTCTGCTGCTGCCTTCTGCTCTTCTTCTTATGCTGTTGGCAATTaGACCACAAGGAATGATGGG | + |
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Preference number: 4 (lower is better) Translates to: GIFGSITPLSAAAFCSSSYAVGN*TTRNDG Trigger: CCCATCATTCCTTGTGGTGCAATTGCCAACAGCATA...AGAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | AATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATTGGAACATGGTTACTaGAAAGTTGTAGGAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: NPALLLEVAQELFKLCQGLEHGY*KVVGDA Trigger: AGCATCTCCTACAACTTTCCAGTAACCATGTTCCAA...TCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR GCA 90 bp | AATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACTCTTCAAGCTTTGCCAGGGATCTCAATTTTCTTGGTaGTCTTTGCAGACAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: NPALLLEVAQELFKLCQGSQFSW*SLQTTE Trigger: TTCTGTTGTCTGCAAAGAGCACCAAGAAAATTGAGA...TCCCTGGCAAAGCTTGAAGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | GGATCTTTGGGTCTATCACTCCATTGTCTGCTGCTGCCTTCTGCTCTTCTTCTCGAGTGGAAAGGACAATaGACTTTTCTCCTTGGAACA | + |
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Preference number: 4 (lower is better) Translates to: GSLGLSLHCLLLPSALLLEWKGQ*TFLLGT Trigger: TGTTCCAAGGAGAAAAGTCCATTGTCCTTTCCACTC...GAGAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | GTAGTTAGGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTAGTGAATCGTCAGGATaGCAAAAGAGGCCAACAGCG | + |
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Preference number: 4 (lower is better) Translates to: VVRIILDSINPALLLEVASESSG*QKRPTA Trigger: CGCTGTTGGCCTCTTTTGCCATCCTGACGATTCACT...AGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCCTAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR GCA 90 bp | GGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACCGTTTGCTGTTTCAATaGTGTGTTTTCTGGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GLYWIPSIQHSSLRWLRNRLLFQ*CVFWQS Trigger: AGACTGCCAGAAAACACAGCATTGAAACAGCAAACG...GTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR GCA 90 bp | GGATCTTTGGGTCTATCACTCCATTGTCTGCTGCTGCCTTCTGCTCTTCTTCTCGAAAGTTGTAGGAGATaGTCAAACTGTAGTTACCAG | + |
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Preference number: 4 (lower is better) Translates to: GSLGLSLHCLLLPSALLLESCRR*SNCSYQ Trigger: CTGGTAACTACAGTTTGAGCATCTCCTACAACTTTC...GAGAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | CAGTGTTCCACCTATCTGCTGGGAGGACACACACAGAATAAAAGAATTCTACAATGTTTTCTGGCAGTCTaGACAGGTCATACTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QCSTYLLGGHTQNKRILQCFLAV*TGHTGA Trigger: TGCCCCAGTATGACCTGTCCAGACTGCCAGAAAACA...TTGTAGAATTCTTTTATTCTGTGTGTGTCCTCCCAGCAGATAGGTGGAACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR CCA 90 bp | GGGATCTTTGGGTCTATCACTCCATTGTCTGCTGCTGCCTTCTGCTCTTCTTCTTCCTTACCCACCAATTaGCTATTGCTTCTTGATAAG | + |
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Preference number: 4 (lower is better) Translates to: GIFGSITPLSAAAFCSSSSLPTN*LLLLDK Trigger: CTTATCAAGAAGCAATAGCCAATTGGTGGGTAAGGA...AGAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | GGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACCGATCCATGTCAGAGTaGAAAGGACAATGGACTTTT | + |
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Preference number: 4 (lower is better) Translates to: GLYWIPSIQHSSLRWLRNRSMSE*KGQWTF Trigger: AAAAGTCCATTGTCCTTTCCACTCTGACATGGATCG...GTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | GGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACATGGACTTTTCTCCTTaGAACATGGTTACTGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: GLYWIPSIQHSSLRWLRNMDFSP*NMVTGK Trigger: CTTTCCAGTAACCATGTTCCAAGGAGAAAAGTCCAT...GTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | GGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACGAAGTTACTGGATCTTaGATTCCGAAATTTGACATA | + |
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Preference number: 4 (lower is better) Translates to: GLYWIPSIQHSSLRWLRNEVTGS*IPKFDI Trigger: TATGTCAAATTTCGGAATCCAAGATCCAGTAACTTC...GTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | GTAGTTAGGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTTTTCTCCTTGGAACATaGTTACTGGAAAGTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: VVRIILDSINPALLLEVAFLLGT*LLESCR Trigger: CCTACAACTTTCCAGTAACCATGTTCCAAGGAGAAA...AGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCCTAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | TTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACTCTTTATCTCAATTTTCTTaGTGCTCTTTGCAGACAACA | + |
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Preference number: 4 (lower is better) Translates to: LYWIPSIQHSSLRWLRNSLSQFS*CSLQTT Trigger: TGTTGTCTGCAAAGAGCACCAAGAAAATTGAGATAA...AGAGTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CCA 90 bp | GTAAGGAAGAAATATTGTTGCCATCAGGAATCTGCACAAACAAATTTGGTCACACAATGCTGTGTTTTCTaGCAGTCTGGACAGGTCATA | + |
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Preference number: 4 (lower is better) Translates to: VRKKYCCHQESAQTNLVTQCCVF*QSGQVI Trigger: TATGACCTGTCCAGACTGCCAGAAAACACAGCATTG...TGTGACCAAATTTGTTTGTGCAGATTCCTGATGGCAACAATATTTCTTCCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| 3UTR CAA 72 bp | AAATATTGTTGCCATCAGGAATCTGCACAAACAAATTaGGTCACACCAACCCTCAGGTGTTCTTCCACAATT | + |
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Preference number: 4 (lower is better) Translates to: KYCCHQESAQTN*VTPTLRCSSTI Trigger: AATTGTGGAAGAACACCTGAGGGTTGGTGTGACCAAATTTGTTTGTGCAGATTCCTGATGGCAACAATATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR GCA 90 bp | TCCACCTATCTGCTGGGAGGACACACACAGAATAAAAGAATTCTACAACTAGTATCTCAATTTTCTTGGTaGTCTTTGCAGACAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: STYLLGGHTQNKRILQLVSQFSW*SLQTTE Trigger: TTCTGTTGTCTGCAAAGAGCACCAAGAAAATTGAGA...TACTAGTTGTAGAATTCTTTTATTCTGTGTGTGTCCTCCCAGCAGATAGGTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR CCA 90 bp | GTAAGGAAGAAATATTGTTGCCATCAGGAATCTGCACAAACAAATTTGGTCACAGAAGTTACTGGATCTTaGATTCCGAAATTTGACATA | + |
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Preference number: 4 (lower is better) Translates to: VRKKYCCHQESAQTNLVTEVTGS*IPKFDI Trigger: TATGTCAAATTTCGGAATCCAAGATCCAGTAACTTC...TGTGACCAAATTTGTTTGTGCAGATTCCTGATGGCAACAATATTTCTTCCTTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS GCA 90 bp | GTGATGAAAAAGATAGAGAGGACCACCGAGGCAGATAGATTTAGCTaGTGGGTGGGCAACGTTTGCTGTTTCAATGCTGTGTTTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: VMKKIERTTEADRFS*WVGNVCCFNAVFSG Trigger: GCCAGAAAACACAGCATTGAAACAGCAAACGTTGCCCACCCAGCAGCTAAATCTATCTGCCTCGGTGGTCCTCTCTATCTTTTTCATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS CCA 90 bp | GCAATTGCACCACAAGGAATGATGGGAGTGTCATTGTGGGACACTTaGAACGGATCACAGTTCGTAGTATCCCAAATATCCTTACCCACC | + |
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Preference number: 5 (lower is better) Translates to: AIAPQGMMGVSLWDT*NGSQFVVSQISLPT Trigger: GGTGGGTAAGGATATTTGGGATACTACGAACTGTGATCCGTTCCAAGTGTCCCACAATGACACTCCCATCATTCCTTGTGGTGCAATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS GCA 90 bp | TGGACTTTTCTCCTTGGAACATGGTTACTGGAAAGTTGTAGGAGATaGTCAAACTGTAGTTACCAGCAGGTAAGCCTTCAGCGAAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: WTFLLGTWLLESCRR*SNCSYQQVSLQRRR Trigger: ACGCCTTCGCTGAAGGCTTACCTGCTGGTAACTACAGTTTGAGCATCTCCTACAACTTTCCAGTAACCATGTTCCAAGGAGAAAAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 |
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| CDS-3UTR CAA 90 bp | GGATTATATTGGATTCCATCAATCCAGCACTCCTCCTTGAGGTGGCTCAGGAACTCATTGAATATGCTGTaGGCAATTGCACCACAAGGA | + |
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Preference number: 5 (lower is better) Translates to: GLYWIPSIQHSSLRWLRNSLNML*AIAPQG Trigger: TCCTTGTGGTGCAATTGCCAACAGCATATTCAATGA...GTTCCTGAGCCACCTCAAGGAGGAGTGCTGGATTGATGGAATCCAATATAATCC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS-3UTR CAA 90 bp | CAGTATGTAATGTACCCAGTCATCACTTCTTTGGGGCTCCTTTTCTTGGGAGGGTCATTGAATATGCTGTaGGCAATTGCACCACAAGGA | + |
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Preference number: 5 (lower is better) Translates to: QYVMYPVITSLGLLFLGGSLNML*AIAPQG Trigger: TCCTTGTGGTGCAATTGCCAACAGCATATTCAATGA...CCCTCCCAAGAAAAGGAGCCCCAAAGAAGTGATGACTGGGTACATTACATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS-3UTR CAA 90 bp | GGGATCTTTGGGTCTATCACTCCATTGTCTGCTGCTGCCTTCTGCTCTTCTTCTCCCACCAATTGGCTATaGCTTCTTGATAAGATATAT | + |
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Preference number: 5 (lower is better) Translates to: GIFGSITPLSAAAFCSSSPTNWL*LLDKIY Trigger: ATATATCTTATCAAGAAGCAATAGCCAATTGGTGGG...AGAAGAAGAGCAGAAGGCAGCAGCAGACAATGGAGTGATAGACCCAAAGATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119407.8 |
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| CDS CCA 90 bp | AGGCTTCGAACTTCCTGCAAATGTACTGGTGAAGTTACTGGATCTTaGATTCCGAAATTTGACATACTTATCTGTCCACCATGTAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: RLRTSCKCTGEVTGS*IPKFDILICPPCKP Trigger: GGGCTTACATGGTGGACAGATAAGTATGTCAAATTTCGGAATCCAAGATCCAGTAACTTCACCAGTACATTTGCAGGAAGTTCGAAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS-3UTR CAA 90 bp | GTAAGGAAGAAATATTGTTGCCATCAGGAATCTGCACAAACAAATTTGGTCACACCCACCAATTGGCTATaGCTTCTTGATAAGATATAT | + |
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Preference number: 5 (lower is better) Translates to: VRKKYCCHQESAQTNLVTPTNWL*LLDKIY Trigger: ATATATCTTATCAAGAAGCAATAGCCAATTGGTGGG...TGTGACCAAATTTGTTTGTGCAGATTCCTGATGGCAACAATATTTCTTCCTTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS GCA 72 bp | AGGAAGGGGCGTGGCATAGGAGGATACTGTAGGAGATaGTCAAACTGTAGTTACCAGCAGGTAAGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RKGRGIGGYCRR*SNCSYQQVSLQ Trigger: CTGAAGGCTTACCTGCTGGTAACTACAGTTTGAGCATCTCCTACAGTATCCTCCTATGCCACGCCCCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120112.2 |
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| CDS GCA 72 bp | AAGATAGAGAGGACCACCGAGGCAGATAGATTTAGCTaGTGGGTGGGCAACGTTTGCTGTTTCAATGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: KIERTTEADRFS*WVGNVCCFNAV Trigger: CACAGCATTGAAACAGCAAACGTTGCCCACCCAGCAGCTAAATCTATCTGCCTCGGTGGTCCTCTCTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS CCA 72 bp | GCAATTGCACCACAAGGAATGATGGGAGTGTCATTGTaGGACACTTGGAACGGATCACAGTTCGTAGTATCC | + |
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Preference number: 6 (lower is better) Translates to: AIAPQGMMGVSL*DTWNGSQFVVS Trigger: GGATACTACGAACTGTGATCCGTTCCAAGTGTCCCACAATGACACTCCCATCATTCCTTGTGGTGCAATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS CCA 72 bp | CTCCTCCCCCGATCCATGTCAGAGTGGAAAGGACAATaGACTTTTCTCCTTGGAACATGGTTACTGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LLPRSMSEWKGQ*TFLLGTWLLES Trigger: ACTTTCCAGTAACCATGTTCCAAGGAGAAAAGTCCATTGTCCTTTCCACTCTGACATGGATCGGGGGAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 |
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| CDS CAA 90 bp | GGCAATTGCACCACAAGGAATGATGGGAGTGTCATTGTGGGACACTaGGAACGGATCACAGTTCGTAGTATCCCAAATATCCTTACCCAC | + |
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Preference number: 6 (lower is better) Translates to: GNCTTRNDGSVIVGH*ERITVRSIPNILTH Trigger: GTGGGTAAGGATATTTGGGATACTACGAACTGTGATCCGTTCCAAGTGTCCCACAATGACACTCCCATCATTCCTTGTGGTGCAATTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS GCA 72 bp | GATAGGTTTGGCCCAGTGCAGAGGCTTCGAACTTCCTaGAAATGTACTGGTGAAGTTACTGGATCTTGGATT | + |
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Preference number: 6 (lower is better) Translates to: DRFGPVQRLRTS*KCTGEVTGSWI Trigger: AATCCAAGATCCAGTAACTTCACCAGTACATTTGCAGGAAGTTCGAAGCCTCTGCACTGGGCCAAACCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS CCA 72 bp | CCACAAGGAATGATGGGAGTGTCATTGTGGGACACTTaGAACGGATCACAGTTCGTAGTATCCCAAATATCC | + |
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Preference number: 6 (lower is better) Translates to: PQGMMGVSLWDT*NGSQFVVSQIS Trigger: GGATATTTGGGATACTACGAACTGTGATCCGTTCCAAGTGTCCCACAATGACACTCCCATCATTCCTTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS CAA 72 bp | TTGGCAATTGCACCACAAGGAATGATGGGAGTGTCATaGTGGGACACTTGGAACGGATCACAGTTCGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: LAIAPQGMMGVS*WDTWNGSQFVV Trigger: TACTACGAACTGTGATCCGTTCCAAGTGTCCCACAATGACACTCCCATCATTCCTTGTGGTGCAATTGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS GCA 72 bp | CTCCTTGGAACATGGTTACTGGAAAGTTGTAGGAGATaGTCAAACTGTAGTTACCAGCAGGTAAGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLGTWLLESCRR*SNCSYQQVSLQ Trigger: CTGAAGGCTTACCTGCTGGTAACTACAGTTTGAGCATCTCCTACAACTTTCCAGTAACCATGTTCCAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 |
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| CDS CAA 72 bp | ACCACAAGGAATGATGGGAGTGTCATTGTGGGACACTaGGAACGGATCACAGTTCGTAGTATCCCAAATATC | + |
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Preference number: 6 (lower is better) Translates to: TTRNDGSVIVGH*ERITVRSIPNI Trigger: GATATTTGGGATACTACGAACTGTGATCCGTTCCAAGTGTCCCACAATGACACTCCCATCATTCCTTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS CAA 72 bp | CCATGTCAGAGTGGAAAGGACAATGGACTTTTCTCCTaGGAACATGGTTACTGGAAAGTTGTAGGAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: PCQSGKDNGLFS*EHGYWKVVGDA Trigger: AGCATCTCCTACAACTTTCCAGTAACCATGTTCCAAGGAGAAAAGTCCATTGTCCTTTCCACTCTGACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 |
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| CDS CCA 72 bp | GAGTGGAAAGGACAATGGACTTTTCTCCTTGGAACATaGTTACTGGAAAGTTGTAGGAGATGCTCAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: EWKGQWTFLLGT*LLESCRRCSNC Trigger: ACAGTTTGAGCATCTCCTACAACTTTCCAGTAACCATGTTCCAAGGAGAAAAGTCCATTGTCCTTTCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 |
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| CDS CAA 90 bp | GAATTCAGGTTGTATGAAAGAGTTATGGTATCATTGAATATGCTGTaGGCAATTGCACCACAAGGAATGATGGGAGTGTCATTGTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: EFRLYERVMVSLNML*AIAPQGMMGVSLWD Trigger: GTCCCACAATGACACTCCCATCATTCCTTGTGGTGCAATTGCCAACAGCATATTCAATGATACCATAACTCTTTCATACAACCTGAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS CCA 72 bp | ACTTCCTGCAAATGTACTGGTGAAGTTACTGGATCTTaGATTCCGAAATTTGACATACTTATCTGTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: TSCKCTGEVTGS*IPKFDILICPP Trigger: TGGTGGACAGATAAGTATGTCAAATTTCGGAATCCAAGATCCAGTAACTTCACCAGTACATTTGCAGGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS CAA 72 bp | TTGTATGAAAGAGTTATGGTATCATTGAATATGCTGTaGGCAATTGCACCACAAGGAATGATGGGAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LYERVMVSLNML*AIAPQGMMGVS Trigger: TGACACTCCCATCATTCCTTGTGGTGCAATTGCCAACAGCATATTCAATGATACCATAACTCTTTCATACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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| CDS CAA 90 bp | CCACTCTTTAGCATTGGGACTTCTATCTGTGTAGATGAATTCAGGTaGTATGAAAGAGTTATGGTATCATTGAATATGCTGTTGGCAATT | + |
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Preference number: 6 (lower is better) Translates to: PLFSIGTSICVDEFR*YERVMVSLNMLLAI Trigger: AATTGCCAACAGCATATTCAATGATACCATAACTCTTTCATACAACCTGAATTCATCTACACAGATAGAAGTCCCAATGCTAAAGAGTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023434.15 ENSMUST00000119407.8 ENSMUST00000120112.2 |
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