Pregenerated sensors for TMEM30A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032328Ensembl transcript IDs: ENSMUST00000034878.12, ENSMUST00000120690.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTCAACGTCATTATCGGAGAATCATAATAGAGCAACTGAACATATaGACCACCTCAACAAGGAGGGACTTTAAGCCTTTACACACGACA | + |
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Preference number: 1 (lower is better) Translates to: SQRHYRRIIIEQLNI*TTSTRRDFKPLHTT Trigger: TGTCGTGTGTAAAGGCTTAAAGTCCCTCCTTGTTGAGGTGGTTCATATGTTCAGTTGCTCTATTATGATTCTCCGATAATGACGTTGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGACTGCCAAGCAGCTGCCCACCTCACCTAGATTCATTCTTCCTTCTGCAGAACAGGACTGGCCTTaGTGCACATGCAGTAGATTT | + |
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Preference number: 2 (lower is better) Translates to: ERTAKQLPTSPRFILPSAEQDWP*CTCSRF Trigger: AAATCTACTGCATGTGCATCAAGGCCAGTCCTGTTC...TGCAGAAGGAAGAATGAATCTAGGTGAGGTGGGCAGCTGCTTGGCAGTCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR-3UTR TCA 90 bp | GTATCCTCCCCTGAACATTTCTATCTGGTTTACAGTTGGGGCACAGGAGAGGACGTACAAGCTAAAGTGTaGAGTCAACGTCATTATCGG | + |
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Preference number: 2 (lower is better) Translates to: VSSPEHFYLVYSWGTGEDVQAKV*SQRHYR Trigger: CCGATAATGACGTTGACTTCACACTTTAGCTTGTAC...GTCCTCTCCTGTGCCCCAACTGTAAACCAGATAGAAATGTTCAGGGGAGGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR CAA 90 bp | AGCTGTGAAAATGTTAGAGCTCTTCAGTTTCCTTCAGCAGACCCCTaGGTCCCAGTTAGAGACAGATGCAGGCTAGTTAGTAGTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SCENVRALQFPSADP*VPVRDRCRLVSSPF Trigger: AAAAGGACTACTAACTAGCCTGCATCTGTCTCTAACTGGGACCAAGGGGTCTGCTGAAGGAAACTGAAGAGCTCTAACATTTTCACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR-3UTR GCA 90 bp | ATCATATGCAACAGGGACACTTTTCAGAATAACAGCATTCTGCATGACCGACAGAGGAAAGAGGCTCTATaGATCACATGGCCTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: IICNRDTFQNNSILHDRQRKEAL*ITWPVP Trigger: TGGGACAGGCCATGTGATGCATAGAGCCTCTTTCCT...CTGTCGGTCATGCAGAATGCTGTTATTCTGAAAAGTGTCCCTGTTGCATATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAGAAGCAATCATCTTAACACTACAAACCACAATAATGAAAGTATCCTCCGGACTGCCAAGCAGCTaGCCACCTCACCTAGATTCA | + |
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Preference number: 2 (lower is better) Translates to: KAEAIILTLQTTIMKVSSGLPSS*PPHLDS Trigger: TGAATCTAGGTGAGGTGGGCAGCTGCTTGGCAGTCC...GGAGGATACTTTCATTATTGTGGTTTGTAGTGTTAAGATGATTGCTTCTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR-3UTR TCA 90 bp | TCAACAAGGAGGGACTTTAAGCCTTTACACACGACACATGAAAATGATGAAGTGATTCAAAAGCTAGGTTaGACAGGACTGGCCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: STRRDFKPLHTTHENDEVIQKLG*TGLALM Trigger: CATCAAGGCCAGTCCTGTTCAACCTAGCTTTTGAAT...CACTTCATCATTTTCATGTGTCGTGTGTAAAGGCTTAAAGTCCCTCCTTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR CAA 90 bp | CTTCAAAATGACATACTAACCAGACATCAGCATTCAAAAGCTAGGTaGAACAGGACTGGCCTTGATGCACATGCAGTAGATTTGGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LQNDILTRHQHSKAR*NRTGLDAHAVDLVS Trigger: TGAAACCAAATCTACTGCATGTGCATCAAGGCCAGTCCTGTTCAACCTAGCTTTTGAATGCTGATGTCTGGTTAGTATGTCATTTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAGAAGCAATCATCTTAACACTACAAACCACAATAATGAAAGTATCCTCCATTCATTCTTCCTTCTaGAGTGTAAGCCTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: KAEAIILTLQTTIMKVSSIHSSF*SVSLLG Trigger: TCCCAGGAGGCTTACACTGCAGAAGGAAGAATGAAT...GGAGGATACTTTCATTATTGTGGTTTGTAGTGTTAAGATGATTGCTTCTGCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR CAA 90 bp | TCTGGAATATTATACTCAGTCACTTACCTGTTAAATAAGAACAGCTaGAGGTATTTCCAAGGCAGAAGCAATCATCTTAACACTACAAAC | + |
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Preference number: 2 (lower is better) Translates to: SGILYSVTYLLNKNS*RYFQGRSNHLNTTN Trigger: GTTTGTAGTGTTAAGATGATTGCTTCTGCCTTGGAAATACCTCAAGCTGTTCTTATTTAACAGGTAAGTGACTGAGTATAATATTCCAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR CCA 72 bp | GTATCCTCCCCTGAACATTTCTATCTGGTTTACAGTTaGGGCACAGGAGAGGACTGCCAAGCAGCTGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: VSSPEHFYLVYS*GTGEDCQAAAH Trigger: GTGGGCAGCTGCTTGGCAGTCCTCTCCTGTGCCCCAACTGTAAACCAGATAGAAATGTTCAGGGGAGGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGACTGCCAAGCAGCTGCCCACCTCACCTAGATTCATTCTTCCTTCTGCAAAACATTCCAGTAGCTaGGGACTCCAAATGCAACTT | + |
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Preference number: 3 (lower is better) Translates to: ERTAKQLPTSPRFILPSAKHSSS*GLQMQL Trigger: AAGTTGCATTTGGAGTCCCAAGCTACTGGAATGTTT...TGCAGAAGGAAGAATGAATCTAGGTGAGGTGGGCAGCTGCTTGGCAGTCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR-3UTR CAA 90 bp | TCAACAAGGAGGGACTTTAAGCCTTTACACACGACACATGAAAATGATGAAGTGCATTCAAAAGCTAGGTaGAACAGGACTGGCCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: STRRDFKPLHTTHENDEVHSKAR*NRTGLD Trigger: ATCAAGGCCAGTCCTGTTCAACCTAGCTTTTGAATG...CACTTCATCATTTTCATGTGTCGTGTGTAAAGGCTTAAAGTCCCTCCTTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR CCA 72 bp | AGTAGCTTGGGACTCCAAATGCAACTTCAGGTAGCATaGGACTTCAGAATGCAACATTTTACTCAAATGAGA | + |
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Preference number: 3 (lower is better) Translates to: SSLGLQMQLQVA*DFRMQHFTQMR Trigger: TCTCATTTGAGTAAAATGTTGCATTCTGAAGTCCCATGCTACCTGAAGTTGCATTTGGAGTCCCAAGCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | ATCATATGCAACAGGGACACTTTTCAGAATAACAGCATTCTGCATGACCGACAGGCACCGTGCCGGCCGTaGGGATGGGCTGCCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: IICNRDTFQNNSILHDRQAPCRP*GWAARR Trigger: CCGCCTGGCAGCCCATCCTCACGGCCGGCACGGTGC...CTGTCGGTCATGCAGAATGCTGTTATTCTGAAAAGTGTCCCTGTTGCATATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | AAGGCAGAAGCAATCATCTTAACACTACAAACCACAATAATGAAAGTATCCTCCGCACCGTGCCGGCCGTaGGGATGGGCTGCCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KAEAIILTLQTTIMKVSSAPCRP*GWAARR Trigger: CCGCCTGGCAGCCCATCCTCACGGCCGGCACGGTGC...GGAGGATACTTTCATTATTGTGGTTTGTAGTGTTAAGATGATTGCTTCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | GTATCCTCCCCTGAACATTTCTATCTGGTTTACAGTTGGGGCACAGGAGAGGACCTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSPEHFYLVYSWGTGEDLSSHP*NSAQDH Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAG...GTCCTCTCCTGTGCCCCAACTGTAAACCAGATAGAAATGTTCAGGGGAGGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR GCA 90 bp | GTATCCTCCCCTGAACATTTCTATCTGGTTTACAGTTGGGGCACAGGAGAGGACGAGATAAACATTTATTaGAGGGGCTGGAAGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VSSPEHFYLVYSWGTGEDEINIY*RGWKVL Trigger: CAGAACCTTCCAGCCCCTGCAATAAATGTTTATCTC...GTCCTCTCCTGTGCCCCAACTGTAAACCAGATAGAAATGTTCAGGGGAGGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034878.12 |
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| CDS-3UTR CCA 90 bp | GTATCCTCCCCTGAACATTTCTATCTGGTTTACAGTTGGGGCACAGGAGAGGACGGGTCTCCATTTAACTaGCTATCATCTCGAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: VSSPEHFYLVYSWGTGEDGSPFN*LSSRDF Trigger: GAAATCTCGAGATGATAGCCAGTTAAATGGAGACCC...GTCCTCTCCTGTGCCCCAACTGTAAACCAGATAGAAATGTTCAGGGGAGGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR CAA 72 bp | TCCTGGGAAACGGTCACATATAAACATTCCAGTAGCTaGGGACTCCAAATGCAACTTCAGGTAGCATGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SWETVTYKHSSS*GLQMQLQVAWD Trigger: GTCCCATGCTACCTGAAGTTGCATTTGGAGTCCCAAGCTACTGGAATGTTTATATGTGACCGTTTCCCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR CAA 72 bp | AATGTTAGAGCTCTTCAGTTTCCTTCAGCAGACCCCTaGGTCCCAGTTAGAGACAGATGCAGGCTAGTTAGT | + |
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Preference number: 4 (lower is better) Translates to: NVRALQFPSADP*VPVRDRCRLVS Trigger: ACTAACTAGCCTGCATCTGTCTCTAACTGGGACCAAGGGGTCTGCTGAAGGAAACTGAAGAGCTCTAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | AAGGCAGAAGCAATCATCTTAACACTACAAACCACAATAATGAAAGTATCCTCCGTAGCCGTTGCTGTTTaGAGGCCGTGTTATCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KAEAIILTLQTTIMKVSSVAVAV*RPCYPA Trigger: GGCCGGATAACACGGCCTTCAAACAGCAACGGCTAC...GGAGGATACTTTCATTATTGTGGTTTGTAGTGTTAAGATGATTGCTTCTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR GCA 90 bp | GAGAGGACTGCCAAGCAGCTGCCCACCTCACCTAGATTCATTCTTCCTTCTGCATCATATACTGCCTTATaGCAGTTTACTGGCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: ERTAKQLPTSPRFILPSASYTAL*QFTGFI Trigger: AATAAAGCCAGTAAACTGGCATAAGGCAGTATATGA...TGCAGAAGGAAGAATGAATCTAGGTGAGGTGGGCAGCTGCTTGGCAGTCCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | TTTCAAAGGTTAGCAAGTCATTACACTCATACATCTCATAATCCCTTTCATCACGTAGCCGTTGCTGTTTaGAGGCCGTGTTATCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: FQRLASHYTHTSHNPFHHVAVAV*RPCYPA Trigger: GGCCGGATAACACGGCCTTCAAACAGCAACGGCTAC...GTGATGAAAGGGATTATGAGATGTATGAGTGTAATGACTTGCTAACCTTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR GCA 90 bp | AAGGCAGAAGCAATCATCTTAACACTACAAACCACAATAATGAAAGTATCCTCCCAGGCGGGTAGCCGTTaGTGTTTGAAGGCCGTGTTA | + |
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Preference number: 4 (lower is better) Translates to: KAEAIILTLQTTIMKVSSQAGSR*CLKAVL Trigger: TAACACGGCCTTCAAACAGCAACGGCTACCCGCCTG...GGAGGATACTTTCATTATTGTGGTTTGTAGTGTTAAGATGATTGCTTCTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | TTTCAAAGGTTAGCAAGTCATTACACTCATACATCTCATAATCCCTTTCATCACGGATGTTGTTGGAGGTaGCGAAGATGCCGATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: FQRLASHYTHTSHNPFHHGCCWR*RRCRCR Trigger: TCGGCATCGGCATCTTCGTCACCTCCAACAACATCC...GTGATGAAAGGGATTATGAGATGTATGAGTGTAATGACTTGCTAACCTTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | ATACTAACCAGACATCAGCATTCAAAAGCTAGGTTGAACAGGACTGGCCTTGATCATCTCTCCGCTCTATaGGACGATACAACTTACGAA | + |
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Preference number: 4 (lower is better) Translates to: ILTRHQHSKARLNRTGLDHLSAL*DDTTYE Trigger: TTCGTAAGTTGTATCGTCTCATAGAGCGGAGAGATG...ATCAAGGCCAGTCCTGTTCAACCTAGCTTTTGAATGCTGATGTCTGGTTAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR GCA 90 bp | GTATCCTCCCCTGAACATTTCTATCTGGTTTACAGTTGGGGCACAGGAGAGGACTCATATACTGCCTTATaGCAGTTTACTGGCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: VSSPEHFYLVYSWGTGEDSYTAL*QFTGFI Trigger: AATAAAGCCAGTAAACTGGCATAAGGCAGTATATGA...GTCCTCTCCTGTGCCCCAACTGTAAACCAGATAGAAATGTTCAGGGGAGGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CCA 90 bp | TCAACAAGGAGGGACTTTAAGCCTTTACACACGACACATGAAAATGATGAAGTGATTTATTGCAGGGGCTaGAAGGTTCTGTTCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: STRRDFKPLHTTHENDEVIYCRG*KVLFQC Trigger: ACACTGGAACAGAACCTTCCAGCCCCTGCAATAAAT...CACTTCATCATTTTCATGTGTCGTGTGTAAAGGCTTAAAGTCCCTCCTTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034878.12 |
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| CDS-3UTR CCA 90 bp | ATCATATGCAACAGGGACACTTTTCAGAATAACAGCATTCTGCATGACCGACAGGGGTCTCCATTTAACTaGCTATCATCTCGAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: IICNRDTFQNNSILHDRQGSPFN*LSSRDF Trigger: GAAATCTCGAGATGATAGCCAGTTAAATGGAGACCC...CTGTCGGTCATGCAGAATGCTGTTATTCTGAAAAGTGTCCCTGTTGCATATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR CAA 72 bp | ATGAATGTCCCATATTCTTCCTATTTACAACAGGAGTaGGTTTCAAATGACAGGAACCAGAGAAGGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: MNVPYSSYLQQE*VSNDRNQRRTG Trigger: CCCTGTCCTTCTCTGGTTCCTGTCATTTGAAACCAACTCCTGTTGTAAATAGGAAGAATATGGGACATTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | TCAACAAGGAGGGACTTTAAGCCTTTACACACGACACATGAAAATGATGAAGTGCTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT | + |
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Preference number: 4 (lower is better) Translates to: STRRDFKPLHTTHENDEVLSSHP*NSAQDH Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAG...CACTTCATCATTTTCATGTGTCGTGTGTAAAGGCTTAAAGTCCCTCCTTGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | ATACTAACCAGACATCAGCATTCAAAAGCTAGGTTGAACAGGACTGGCCTTGATCAGGGTAATTGTATGTaGTGTTCAAAAAGTACTGTC | + |
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Preference number: 4 (lower is better) Translates to: ILTRHQHSKARLNRTGLDQGNCM*CSKSTV Trigger: GACAGTACTTTTTGAACATCACATACAATTACCCTG...ATCAAGGCCAGTCCTGTTCAACCTAGCTTTTGAATGCTGATGTCTGGTTAGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CCA 90 bp | ATACTAACCAGACATCAGCATTCAAAAGCTAGGTTGAACAGGACTGGCCTTGATTTCACATTCCTTACTTaGATTAAGCAAAGCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: ILTRHQHSKARLNRTGLDFTFLT*IKQSTR Trigger: CCTAGTGCTTTGCTTAATCCAAGTAAGGAATGTGAA...ATCAAGGCCAGTCCTGTTCAACCTAGCTTTTGAATGCTGATGTCTGGTTAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | AAGGCAGAAGCAATCATCTTAACACTACAAACCACAATAATGAAAGTATCCTCCCACATTGCCCTCAAATaGCTGTTTCAGTGTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: KAEAIILTLQTTIMKVSSHIALK*LFQCEV Trigger: AACTTCACACTGAAACAGTCATTTGAGGGCAATGTG...GGAGGATACTTTCATTATTGTGGTTTGTAGTGTTAAGATGATTGCTTCTGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034878.12 |
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| CDS-3UTR TCA 90 bp | TTTCAAAGGTTAGCAAGTCATTACACTCATACATCTCATAATCCCTTTCATCACCATCTCTCCGCTCTATaGGACGATACAACTTACGAA | + |
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Preference number: 4 (lower is better) Translates to: FQRLASHYTHTSHNPFHHHLSAL*DDTTYE Trigger: TTCGTAAGTTGTATCGTCTCATAGAGCGGAGAGATG...GTGATGAAAGGGATTATGAGATGTATGAGTGTAATGACTTGCTAACCTTTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CCA 90 bp | TTTCAAAGGTTAGCAAGTCATTACACTCATACATCTCATAATCCCTTTCATCACGCCACATGGCGCAATTaGTCTGTCTTCATTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FQRLASHYTHTSHNPFHHATWRN*SVFISS Trigger: AGAAGAAATGAAGACAGACCAATTGCGCCATGTGGC...GTGATGAAAGGGATTATGAGATGTATGAGTGTAATGACTTGCTAACCTTTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CCA 90 bp | AAGGCAGAAGCAATCATCTTAACACTACAAACCACAATAATGAAAGTATCCTCCAGCAATTCCCAAAAATaGATTCTTTCCTCCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: KAEAIILTLQTTIMKVSSSNSQK*ILSSHP Trigger: TGGATGGGAGGAAAGAATCCATTTTTGGGAATTGCT...GGAGGATACTTTCATTATTGTGGTTTGTAGTGTTAAGATGATTGCTTCTGCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR TCA 90 bp | TTTCAAAGGTTAGCAAGTCATTACACTCATACATCTCATAATCCCTTTCATCACCAGGGTAATTGTATGTaGTGTTCAAAAAGTACTGTC | + |
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Preference number: 4 (lower is better) Translates to: FQRLASHYTHTSHNPFHHQGNCM*CSKSTV Trigger: GACAGTACTTTTTGAACATCACATACAATTACCCTG...GTGATGAAAGGGATTATGAGATGTATGAGTGTAATGACTTGCTAACCTTTGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| 3UTR CAA 72 bp | TTATACTCAGTCACTTACCTGTTAAATAAGAACAGCTaGAGGTATTTCCAAGGCAGAAGCAATCATCTTAAC | + |
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Preference number: 4 (lower is better) Translates to: LYSVTYLLNKNS*RYFQGRSNHLN Trigger: GTTAAGATGATTGCTTCTGCCTTGGAAATACCTCAAGCTGTTCTTATTTAACAGGTAAGTGACTGAGTATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS GCA 90 bp | ATGATGAAGAAGGTGGGCAGCACCGTGCCGGCCGTGAGGATGGGCTaGCAGGCGGGTAGCCGTTGCTGTTTGAAGGCCGTGTTATCCGGC | + |
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Preference number: 5 (lower is better) Translates to: MMKKVGSTVPAVRMG*QAGSRCCLKAVLSG Trigger: GCCGGATAACACGGCCTTCAAACAGCAACGGCTACCCGCCTGGCAGCCCATCCTCACGGCCGGCACGGTGCTGCCCACCTTCTTCATCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGACTGCCAAGCAGCTGCCCACCTCACCTAGATTCATTCTTCCTTCTGCAGGTAGCCGTTGCTGTTaGAAGGCCGTGTTATCCGGC | + |
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Preference number: 5 (lower is better) Translates to: ERTAKQLPTSPRFILPSAGSRCC*KAVLSG Trigger: GCCGGATAACACGGCCTTCAAACAGCAACGGCTACC...TGCAGAAGGAAGAATGAATCTAGGTGAGGTGGGCAGCTGCTTGGCAGTCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGACTGCCAAGCAGCTGCCCACCTCACCTAGATTCATTCTTCCTTCTGCATCGATCTCACGGATGTaGTTGGAGGTGACGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: ERTAKQLPTSPRFILPSASISRM*LEVTKM Trigger: CATCTTCGTCACCTCCAACAACATCCGTGAGATCGA...TGCAGAAGGAAGAATGAATCTAGGTGAGGTGGGCAGCTGCTTGGCAGTCCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGACTGCCAAGCAGCTGCCCACCTCACCTAGATTCATTCTTCCTTCTGCACGCCACATGGCGCAATaGGTCTGTCTTCATTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ERTAKQLPTSPRFILPSARHMAQ*VCLHFF Trigger: GAAGAAATGAAGACAGACCAATTGCGCCATGTGGCG...TGCAGAAGGAAGAATGAATCTAGGTGAGGTGGGCAGCTGCTTGGCAGTCCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGACTGCCAAGCAGCTGCCCACCTCACCTAGATTCATTCTTCCTTCTGCATCATTAAACATGCTGTaGGCAATAGCGCCACATGGC | + |
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Preference number: 5 (lower is better) Translates to: ERTAKQLPTSPRFILPSASLNML*AIAPHG Trigger: GCCATGTGGCGCTATTGCCAACAGCATGTTTAATGA...TGCAGAAGGAAGAATGAATCTAGGTGAGGTGGGCAGCTGCTTGGCAGTCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGACTGCCAAGCAGCTGCCCACCTCACCTAGATTCATTCTTCCTTCTGCAGTCCAGCTGGTAATGTaGGGTGTAAATCATCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: ERTAKQLPTSPRFILPSAVQLVM*GVNHLS Trigger: GGAGAGATGATTTACACCCAACATTACCAGCTGGAC...TGCAGAAGGAAGAATGAATCTAGGTGAGGTGGGCAGCTGCTTGGCAGTCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | GTATCCTCCCCTGAACATTTCTATCTGGTTTACAGTTGGGGCACAGGAGAGGACGGAGATAAACATTTATaGCAGGGGCTGGAAGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: VSSPEHFYLVYSWGTGEDGDKHL*QGLEGS Trigger: AGAACCTTCCAGCCCCTGCAATAAATGTTTATCTCC...GTCCTCTCCTGTGCCCCAACTGTAAACCAGATAGAAATGTTCAGGGGAGGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034878.12 |
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| CDS-3UTR CAA 90 bp | ATACTAACCAGACATCAGCATTCAAAAGCTAGGTTGAACAGGACTGGCCTTGATTCGATCTCACGGATGTaGTTGGAGGTGACGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: ILTRHQHSKARLNRTGLDSISRM*LEVTKM Trigger: CATCTTCGTCACCTCCAACAACATCCGTGAGATCGA...ATCAAGGCCAGTCCTGTTCAACCTAGCTTTTGAATGCTGATGTCTGGTTAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | ATCATATGCAACAGGGACACTTTTCAGAATAACAGCATTCTGCATGACCGACAGCGCCACATGGCGCAATaGGTCTGTCTTCATTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: IICNRDTFQNNSILHDRQRHMAQ*VCLHFF Trigger: GAAGAAATGAAGACAGACCAATTGCGCCATGTGGCG...CTGTCGGTCATGCAGAATGCTGTTATTCTGAAAAGTGTCCCTGTTGCATATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | TTTCAAAGGTTAGCAAGTCATTACACTCATACATCTCATAATCCCTTTCATCACGGTAGCCGTTGCTGTTaGAAGGCCGTGTTATCCGGC | + |
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Preference number: 5 (lower is better) Translates to: FQRLASHYTHTSHNPFHHGSRCC*KAVLSG Trigger: GCCGGATAACACGGCCTTCAAACAGCAACGGCTACC...GTGATGAAAGGGATTATGAGATGTATGAGTGTAATGACTTGCTAACCTTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | ATACTAACCAGACATCAGCATTCAAAAGCTAGGTTGAACAGGACTGGCCTTGATTCATTAAACATGCTGTaGGCAATAGCGCCACATGGC | + |
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Preference number: 5 (lower is better) Translates to: ILTRHQHSKARLNRTGLDSLNML*AIAPHG Trigger: GCCATGTGGCGCTATTGCCAACAGCATGTTTAATGA...ATCAAGGCCAGTCCTGTTCAACCTAGCTTTTGAATGCTGATGTCTGGTTAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS CCA 90 bp | AAGCACAAGATGTCACATTCGGAGATAAACATTTATTGCAGGGGCTaGAAGGTTCTGTTCCAGTGTAATCAATCTCGATCTCACGGATGT | + |
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Preference number: 5 (lower is better) Translates to: KHKMSHSEINIYCRG*KVLFQCNQSRSHGC Trigger: ACATCCGTGAGATCGAGATTGATTACACTGGAACAGAACCTTCCAGCCCCTGCAATAAATGTTTATCTCCGAATGTGACATCTTGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034878.12 |
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| CDS TCA 90 bp | AGTGATGTAAGCAATTCCCAAAAATGGATTCTTTCCTCCCATCCATaGAATAGTGCTCAAGATCATCCGTTTCCGTCCATCAAAGGAATG | + |
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Preference number: 5 (lower is better) Translates to: SDVSNSQKWILSSHP*NSAQDHPFPSIKGM Trigger: CATTCCTTTGATGGACGGAAACGGATGATCTTGAGCACTATTTCATGGATGGGAGGAAAGAATCCATTTTTGGGAATTGCTTACATCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | ATCATATGCAACAGGGACACTTTTCAGAATAACAGCATTCTGCATGACCGACAGGTAGCGACGATGATTTaGATAGAAATTAGACAGTCC | + |
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Preference number: 5 (lower is better) Translates to: IICNRDTFQNNSILHDRQVATMI*IEIRQS Trigger: GGACTGTCTAATTTCTATCAAAATCATCGTCGCTAC...CTGTCGGTCATGCAGAATGCTGTTATTCTGAAAAGTGTCCCTGTTGCATATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS-3UTR CAA 90 bp | AAGGCAGAAGCAATCATCTTAACACTACAAACCACAATAATGAAAGTATCCTCCGTAGCGACGATGATTTaGATAGAAATTAGACAGTCC | + |
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Preference number: 5 (lower is better) Translates to: KAEAIILTLQTTIMKVSSVATMI*IEIRQS Trigger: GGACTGTCTAATTTCTATCAAAATCATCGTCGCTAC...GGAGGATACTTTCATTATTGTGGTTTGTAGTGTTAAGATGATTGCTTCTGCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS GCA 90 bp | CCATTATTACTTTCATCTTCAGGGTCTAGCTCATATACTGCCTTATaGCAGTTTACTGGCTTTATTGTATCTTTAAACTTTTCTTCGAGG | + |
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Preference number: 5 (lower is better) Translates to: PLLLSSSGSSSYTAL*QFTGFIVSLNFSSR Trigger: CCTCGAAGAAAAGTTTAAAGATACAATAAAGCCAGTAAACTGGCATAAGGCAGTATATGAGCTAGACCCTGAAGATGAAAGTAATAATGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS GCA 72 bp | AAGGTGGGCAGCACCGTGCCGGCCGTGAGGATGGGCTaGCAGGCGGGTAGCCGTTGCTGTTTGAAGGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: KVGSTVPAVRMG*QAGSRCCLKAV Trigger: CACGGCCTTCAAACAGCAACGGCTACCCGCCTGGCAGCCCATCCTCACGGCCGGCACGGTGCTGCCCACCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS CAA 72 bp | TACATAAACACATTGCCCTCGATCTCACGGATGTTGTaGGAGGTGACGAAGATGCCGATGCCGATGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: YINTLPSISRML*EVTKMPMPMGM Trigger: CATCCCCATCGGCATCGGCATCTTCGTCACCTCCAACAACATCCGTGAGATCGAGGGCAATGTGTTTATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120690.2 |
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| CDS TCA 72 bp | AGCAATTCCCAAAAATGGATTCTTTCCTCCCATCCATaGAATAGTGCTCAAGATCATCCGTTTCCGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SNSQKWILSSHP*NSAQDHPFPSI Trigger: GATGGACGGAAACGGATGATCTTGAGCACTATTTCATGGATGGGAGGAAAGAATCCATTTTTGGGAATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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| CDS CCA 72 bp | ATGTCACATTCGGAGATAAACATTTATTGCAGGGGCTaGAAGGTTCTGTTCCAGTGTAATCAATCTCGATCT | + |
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Preference number: 6 (lower is better) Translates to: MSHSEINIYCRG*KVLFQCNQSRS Trigger: AGATCGAGATTGATTACACTGGAACAGAACCTTCCAGCCCCTGCAATAAATGTTTATCTCCGAATGTGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034878.12 |
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| CDS GCA 72 bp | CTTTCATCTTCAGGGTCTAGCTCATATACTGCCTTATaGCAGTTTACTGGCTTTATTGTATCTTTAAACTTT | + |
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Preference number: 6 (lower is better) Translates to: LSSSGSSSYTAL*QFTGFIVSLNF Trigger: AAAGTTTAAAGATACAATAAAGCCAGTAAACTGGCATAAGGCAGTATATGAGCTAGACCCTGAAGATGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034878.12 ENSMUST00000120690.2 |
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