Pregenerated sensors for TMEM29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041353Ensembl transcript IDs: ENSMUST00000059256.8, ENSMUST00000163233.2, ENSMUST00000173996.8
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAAGGACAATTCACATCATAGCACAAGTGTTGGGACACATCCACTaGCAGTGGACTGCTTTGACCTCAGAGGAGTTCACACCCATAAGA | + |
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Preference number: 1 (lower is better) Translates to: PRTIHIIAQVLGHIH*QWTALTSEEFTPIR Trigger: TCTTATGGGTGTGAACTCCTCTGAGGTCAAAGCAGTCCACTGCCAGTGGATGTGTCCCAACACTTGTGCTATGATGTGAATTGTCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR CCA 90 bp | ACAATTCACATCATAGCACAAGTGTTGGGACACATCCACTGGCAGTaGACTGCTTTGACCTCAGAGGAGTTCACACCCATAAGACACCAA | + |
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Preference number: 1 (lower is better) Translates to: TIHIIAQVLGHIHWQ*TALTSEEFTPIRHQ Trigger: TTGGTGTCTTATGGGTGTGAACTCCTCTGAGGTCAAAGCAGTCCACTGCCAGTGGATGTGTCCCAACACTTGTGCTATGATGTGAATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR CCA 90 bp | TCCACCCACATTTCTCCTCCTCACCAATGCTCATTACTACTGGTTTaGAATTGGCTTCTCCATGATTTGTTCTTTTACATTTCAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: STHISPPHQCSLLLV*NWLLHDLFFYISRK Trigger: TTTCCTTGAAATGTAAAAGAACAAATCATGGAGAAGCCAATTCCAAACCAGTAGTAATGAGCATTGGTGAGGAGGAGAAATGTGGGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR CCA 90 bp | TTTAACATGTACAACCTAATGAGCCACTTGGAAACTAATGTGAATTaGACATGTAATCCATTCAGTTTCAGGAGAAGTCCTCATGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: FNMYNLMSHLETNVN*TCNPFSFRRSPHAA Trigger: AGCAGCATGAGGACTTCTCCTGAAACTGAATGGATTACATGTCCAATTCACATTAGTTTCCAAGTGGCTCATTAGGTTGTACATGTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR TCA 90 bp | TCCTCACCAATGCTCATTACTACTGGTTTGGAATTGGCTTCTCCATaGTTTGTTCTTTTACATTTCAAGGAAAACCACACAAACTTTACC | + |
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Preference number: 1 (lower is better) Translates to: SSPMLITTGLELASP*FVLLHFKENHTNFT Trigger: GGTAAAGTTTGTGTGGTTTTCCTTGAAATGTAAAAGAACAAATCATGGAGAAGCCAATTCCAAACCAGTAGTAATGAGCATTGGTGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR CCA 90 bp | AAAATCAGTAAAAACTCTCAGTATATGAATCACATCACACATATTTaGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAACACTT | + |
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Preference number: 1 (lower is better) Translates to: KISKNSQYMNHITHI*GSRVPRFLLYRLTL Trigger: AAGTGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTTTTTACTGATTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR CAA 90 bp | GTAGTTGAGATCTTTCCAAGGACAATTCACATCATAGCACAAGTGTaGGGACACATCCACTGGCAGTGGACTGCTTTGACCTCAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VVEIFPRTIHIIAQV*GHIHWQWTALTSEE Trigger: CTCCTCTGAGGTCAAAGCAGTCCACTGCCAGTGGATGTGTCCCAACACTTGTGCTATGATGTGAATTGTCCTTGGAAAGATCTCAACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAACACTTAGCACCTGTATTTATCATCTGTaGGTCAGCACCTCCGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: IWGSRVPRFLLYRLTLSTCIYHL*VSTSAF Trigger: GAAGGCGGAGGTGCTGACTCACAGATGATAAATACA...GGTGCTAAGTGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTCTCAGTATATGAATCACATCACACATATTTGGGGATCACGTGTACCCAGGGCAGTGGACTGCTTTaGCCTCAGAGGAGTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: KLSVYESHHTYLGITCTQGSGLL*PQRSSH Trigger: GTGTGAACTCCTCTGAGGTCAAAGCAGTCCACTGCC...CTGGGTACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAAAAACTCTCAGTATATGAATCACATCACACATATTTGGGGATCACGTGTAGGCAGTGGACTGCTTTaGCCTCAGAGGAGTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: SKNSQYMNHITHIWGSRVGSGLL*PQRSSH Trigger: GTGTGAACTCCTCTGAGGTCAAAGCAGTCCACTGCC...TACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTTTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGACTTTTGCACCAGTATATGTAGGGAAGGATTTCTGTAGACGTTTCCCTCCATTGACCTCTTACTaGAAATACAAACAAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GLTFAPVYVGKDFCRRFPPLTSY*KYKQKP Trigger: TGGCTTTTGTTTGTATTTTCAGTAAGAGGTCAATGG...AGGGAAACGTCTACAGAAATCCTTCCCTACATATACTGGTGCAAAAGTCAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR-3UTR GCA 90 bp | CACATTTCTCCTCCTCACCAATGCTCATTACTACTGGTTTGGAATTGGCTTCTCAAGCCAAGACTGCTTTaGGTGAATGCCATTGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: HISPPHQCSLLLVWNWLLKPRLL*VNAIDF Trigger: AAAATCAATGGCATTCACGCAAAGCAGTCTTGGCTT...GAGAAGCCAATTCCAAACCAGTAGTAATGAGCATTGGTGAGGAGGAGAAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR CAA 90 bp | CACCAATGCTCATTACTACTGGTTTGGAATTGGCTTCTCCATGATTaGTTCTTTTACATTTCAAGGAAAACCACACAAACTTTACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: HQCSLLLVWNWLLHD*FFYISRKTTQTLPG Trigger: GCCTGGTAAAGTTTGTGTGGTTTTCCTTGAAATGTAAAAGAACAAATCATGGAGAAGCCAATTCCAAACCAGTAGTAATGAGCATTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCATATCAGAATGAGAAAATTCCACCCACATTTCTCCTCCTCACCAATGCTCGAATACAATGCCCATTaGCCTCTTACTGAAAATACA | + |
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Preference number: 2 (lower is better) Translates to: IHIRMRKFHPHFSSSPMLEYNAH*PLTENT Trigger: TGTATTTTCAGTAAGAGGTCAATGGGCATTGTATTC...GAGCATTGGTGAGGAGGAGAAATGTGGGTGGAATTTTCTCATTCTGATATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACATTTAACATGTACAACCTAATGAGCCACTTGGAAACTAATGTGAATTGGCAAGACTGCTTTGCGTaGATGCCATTGATTTTTATA | + |
|
Preference number: 2 (lower is better) Translates to: TTFNMYNLMSHLETNVNWQDCFA*MPLIFI Trigger: TATAAAAATCAATGGCATTCACGCAAAGCAGTCTTG...CCAATTCACATTAGTTTCCAAGTGGCTCATTAGGTTGTACATGTTAAATGTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR CCA 72 bp | ATCATAGCACAAGTGTTGGGACACATCCACTGGCAGTaGACTGCTTTGACCTCAGAGGAGTTCACACCCATA | + |
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Preference number: 3 (lower is better) Translates to: IIAQVLGHIHWQ*TALTSEEFTPI Trigger: TATGGGTGTGAACTCCTCTGAGGTCAAAGCAGTCCACTGCCAGTGGATGTGTCCCAACACTTGTGCTATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR TCA 72 bp | TTCCCTTCTGAGGATCAGCCCATATTCATATCAGAATaGGAAAATTCCACCCACATTTCTCCTCCTCACCAA | + |
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Preference number: 3 (lower is better) Translates to: FPSEDQPIFISE*ENSTHISPPHQ Trigger: TTGGTGAGGAGGAGAAATGTGGGTGGAATTTTCTCATTCTGATATGAATATGGGCTGATCCTCAGAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR TCA 72 bp | ATCCAAAAAGGCATGCTAAAAGACAGGCAGGGTAGTTaGGATCTTTCCAAGGACAATTCACATCATAGCACA | + |
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Preference number: 3 (lower is better) Translates to: IQKGMLKDRQGS*DLSKDNSHHST Trigger: TGTGCTATGATGTGAATTGTCCTTGGAAAGATCTCAACTACCCTGCCTGTCTTTTAGCATGCCTTTTTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR CCA 72 bp | CCCACATTTCTCCTCCTCACCAATGCTCATTACTACTaGTTTGGAATTGGCTTCTCCATGATTTGTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: PTFLLLTNAHYY*FGIGFSMICSF Trigger: AAAAGAACAAATCATGGAGAAGCCAATTCCAAACCAGTAGTAATGAGCATTGGTGAGGAGGAGAAATGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR CCA 72 bp | AAAAACTCTCAGTATATGAATCACATCACACATATTTaGGGATCACGTGTACCCAGGTTTCTTCTGTATAGG | + |
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Preference number: 3 (lower is better) Translates to: KNSQYMNHITHI*GSRVPRFLLYR Trigger: CCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR CCA 72 bp | TACAACCTAATGAGCCACTTGGAAACTAATGTGAATTaGACATGTAATCCATTCAGTTTCAGGAGAAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: YNLMSHLETNVN*TCNPFSFRRSP Trigger: AGGACTTCTCCTGAAACTGAATGGATTACATGTCCAATTCACATTAGTTTCCAAGTGGCTCATTAGGTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR CCA 72 bp | ATTTCTCCTCCTCACCAATGCTCATTACTACTGGTTTaGAATTGGCTTCTCCATGATTTGTTCTTTTACATT | + |
|
Preference number: 3 (lower is better) Translates to: ISPPHQCSLLLV*NWLLHDLFFYI Trigger: AATGTAAAAGAACAAATCATGGAGAAGCCAATTCCAAACCAGTAGTAATGAGCATTGGTGAGGAGGAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| 3UTR TCA 72 bp | ATGCTCATTACTACTGGTTTGGAATTGGCTTCTCCATaGTTTGTTCTTTTACATTTCAAGGAAAACCACACA | + |
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Preference number: 3 (lower is better) Translates to: MLITTGLELASP*FVLLHFKENHT Trigger: TGTGTGGTTTTCCTTGAAATGTAAAAGAACAAATCATGGAGAAGCCAATTCCAAACCAGTAGTAATGAGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS-3UTR CCA 90 bp | GGGACACATCCACTGGCAGTGGACTGCTTTGACCTCAGAGGAGTTCACACCCATCTGGCGCATGTCCTCTaGCTCCTGCTGCTGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: GTHPLAVDCFDLRGVHTHLAHVL*LLLLPR Trigger: CCTTGGCAGCAGCAGGAGCCAGAGGACATGCGCCAG...ATGGGTGTGAACTCCTCTGAGGTCAAAGCAGTCCACTGCCAGTGGATGTGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR TCA 90 bp | ACAAGTGTTGGGACACATCCACTGGCAGTGGACTGCTTTGACCTCAGAGGAGTTAGGCTGAGGGGCTGCTaGGGCCTCTTGAGAGCTACT | + |
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Preference number: 4 (lower is better) Translates to: TSVGTHPLAVDCFDLRGVRLRGC*GLLRAT Trigger: AGTAGCTCTCAAGAGGCCTCAGCAGCCCCTCAGCCT...AACTCCTCTGAGGTCAAAGCAGTCCACTGCCAGTGGATGTGTCCCAACACTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | GGGACACATCCACTGGCAGTGGACTGCTTTGACCTCAGAGGAGTTCACACCCATAGGCCATTGAGACCCTaGACCAGCATTTCCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GTHPLAVDCFDLRGVHTHRPLRP*TSISQE Trigger: CTCCTGGGAAATGCTGGTGCAGGGTCTCAATGGCCT...ATGGGTGTGAACTCCTCTGAGGTCAAAGCAGTCCACTGCCAGTGGATGTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | ATCATAGCACAAGTGTTGGGACACATCCACTGGCAGTGGACTGCTTTGACCTCATTCAGGTTTTCCTGCTaGCTCTCCAGCTGGCGCATG | + |
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Preference number: 4 (lower is better) Translates to: IIAQVLGHIHWQWTALTSFRFSC*LSSWRM Trigger: CATGCGCCAGCTGGAGAGGCAGCAGGAAAACCTGAA...TGAGGTCAAAGCAGTCCACTGCCAGTGGATGTGTCCCAACACTTGTGCTATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR TCA 90 bp | ATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAACACTTAGCACCCTGGAACAGCCCCTCTaGCAGAGAAGCAGGGACACT | + |
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Preference number: 4 (lower is better) Translates to: IWGSRVPRFLLYRLTLSTLEQPL*QRSRDT Trigger: AGTGTCCCTGCTTCTCTGTCAGAGGGGCTGTTCCAG...GGTGCTAAGTGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | AAGACAGGCAGGGTAGTTGAGATCTTTCCAAGGACAATTCACATCATAGCACAATTCTCCCGGGCCTGCTaGTGGAACAGCCCCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: KTGRVVEIFPRTIHIIAQFSRAC*WNSPSD Trigger: GTCAGAGGGGCTGTTCCAGCAGCAGGCCCGGGAGAA...TTGTGCTATGATGTGAATTGTCCTTGGAAAGATCTCAACTACCCTGCCTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CCA 90 bp | AAGACAGGCAGGGTAGTTGAGATCTTTCCAAGGACAATTCACATCATAGCACAACTGGCGCATGTCCTCTaGCTCCTGCTGCTGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KTGRVVEIFPRTIHIIAQLAHVL*LLLLPR Trigger: CCTTGGCAGCAGCAGGAGCCAGAGGACATGCGCCAG...TTGTGCTATGATGTGAATTGTCCTTGGAAAGATCTCAACTACCCTGCCTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | AAGACAGGCAGGGTAGTTGAGATCTTTCCAAGGACAATTCACATCATAGCACAATCCTCTGGCTCCTGCTaGTGCCAAGGTTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KTGRVVEIFPRTIHIIAQSSGSC*CQGSSG Trigger: GCCAGAGGAACCTTGGCAGCAGCAGGAGCCAGAGGA...TTGTGCTATGATGTGAATTGTCCTTGGAAAGATCTCAACTACCCTGCCTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | ATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAACACTTAGCACCTTCAGGTTTTCCTGCTaGCTCTCCAGCTGGCGCATG | + |
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Preference number: 4 (lower is better) Translates to: IWGSRVPRFLLYRLTLSTFRFSC*LSSWRM Trigger: CATGCGCCAGCTGGAGAGGCAGCAGGAAAACCTGAA...GGTGCTAAGTGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CCA 90 bp | ATCACACATATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAACACTGCCAAGGTTCCTCTaGCAGGGGGACGGGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ITHIWGSRVPRFLLYRLTLPRFL*QGDGSV Trigger: AACAGACCCGTCCCCCTGCCAGAGGAACCTTGGCAG...TGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAATATGTGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR TCA 90 bp | AAACTCTCAGTATATGAATCACATCACACATATTTGGGGATCACGTGTACCCAGAGGCTGAGGGGCTGCTaGGGCCTCTTGAGAGCTACT | + |
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Preference number: 4 (lower is better) Translates to: KLSVYESHHTYLGITCTQRLRGC*GLLRAT Trigger: AGTAGCTCTCAAGAGGCCTCAGCAGCCCCTCAGCCT...CTGGGTACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR TCA 90 bp | ATCACACATATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAACACTGGAACAGCCCCTCTaGCAGAGAAGCAGGGACACT | + |
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Preference number: 4 (lower is better) Translates to: ITHIWGSRVPRFLLYRLTLEQPL*QRSRDT Trigger: AGTGTCCCTGCTTCTCTGTCAGAGGGGCTGTTCCAG...TGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAATATGTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR TCA 90 bp | ATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAACACTTAGCACCCTGAGGGAAAGCCTCTaGGATCCCTTTCAAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: IWGSRVPRFLLYRLTLSTLRESL*DPFQAG Trigger: ACCTGCTTGAAAGGGATCTCAGAGGCTTTCCCTCAG...GGTGCTAAGTGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR TCA 90 bp | ATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAACACTTAGCACCCTGAGCTTTGTCACCTaGGGGAAAGCCTCTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: IWGSRVPRFLLYRLTLSTLSFVT*GKASEI Trigger: GATCTCAGAGGCTTTCCCTCAGGTGACAAAGCTCAG...GGTGCTAAGTGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | CATAAGACACCAATGCAGCACCTTCTAAATGTATTTATCATCTGTGAGTCAGCATTCTCCCGGGCCTGCTaGTGGAACAGCCCCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: HKTPMQHLLNVFIICESAFSRAC*WNSPSD Trigger: GTCAGAGGGGCTGTTCCAGCAGCAGGCCCGGGAGAA...TGCTGACTCACAGATGATAAATACATTTAGAAGGTGCTGCATTGGTGTCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR TCA 90 bp | CACATCACACATATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTACTGAGGGAAAGCCTCTaGGATCCCTTTCAAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HITHIWGSRVPRFLLYRLLRESL*DPFQAG Trigger: ACCTGCTTGAAAGGGATCTCAGAGGCTTTCCCTCAG...TAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAATATGTGTGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | AGGGTAGTTGAGATCTTTCCAAGGACAATTCACATCATAGCACAAGTGTTGGGATTCTCCCAGTACTGCTaGCACAGGGCCTTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RVVEIFPRTIHIIAQVLGFSQYC*HRAFFS Trigger: GGAGAAGAAGGCCCTGTGGCAGCAGTACTGGGAGAA...TCCCAACACTTGTGCTATGATGTGAATTGTCCTTGGAAAGATCTCAACTACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | CATAAGACACCAATGCAGCACCTTCTAAATGTATTTATCATCTGTGAGTCAGCATCCTCTGGCTCCTGCTaGTGCCAAGGTTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HKTPMQHLLNVFIICESASSGSC*CQGSSG Trigger: GCCAGAGGAACCTTGGCAGCAGCAGGAGCCAGAGGA...TGCTGACTCACAGATGATAAATACATTTAGAAGGTGCTGCATTGGTGTCTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CCA 90 bp | CATAAGACACCAATGCAGCACCTTCTAAATGTATTTATCATCTGTGAGTCAGCACTGCCAAGGTTCCTCTaGCAGGGGGACGGGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: HKTPMQHLLNVFIICESALPRFL*QGDGSV Trigger: AACAGACCCGTCCCCCTGCCAGAGGAACCTTGGCAG...TGCTGACTCACAGATGATAAATACATTTAGAAGGTGCTGCATTGGTGTCTTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR TCA 90 bp | AAGACAGGCAGGGTAGTTGAGATCTTTCCAAGGACAATTCACATCATAGCACAACTGAGCTTTGTCACCTaGGGGAAAGCCTCTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: KTGRVVEIFPRTIHIIAQLSFVT*GKASEI Trigger: GATCTCAGAGGCTTTCCCTCAGGTGACAAAGCTCAG...TTGTGCTATGATGTGAATTGTCCTTGGAAAGATCTCAACTACCCTGCCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | AAACTCTCAGTATATGAATCACATCACACATATTTGGGGATCACGTGTACCCAGATGTCCTCTGGCTCCTaGTGCTGCCAAGGTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KLSVYESHHTYLGITCTQMSSGS*CCQGSS Trigger: AGAGGAACCTTGGCAGCAGCAGGAGCCAGAGGACAT...CTGGGTACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| 3UTR CAA 72 bp | ATCTTTCCAAGGACAATTCACATCATAGCACAAGTGTaGGGACACATCCACTGGCAGTGGACTGCTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: IFPRTIHIIAQV*GHIHWQWTALT Trigger: GGTCAAAGCAGTCCACTGCCAGTGGATGTGTCCCAACACTTGTGCTATGATGTGAATTGTCCTTGGAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR TCA 90 bp | AACTCTCAGTATATGAATCACATCACACATATTTGGGGATCACGTGTACCCAGGAAGACTTTCTTCCTCTaGGGAAAGCCCTGCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSQYMNHITHIWGSRVPRKTFFL*GKPCFS Trigger: GGAGAAGCAGGGCTTTCCTCAGAGGAAGAAAGTCTT...CCTGGGTACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | AGTAAAAACTCTCAGTATATGAATCACATCACACATATTTGGGGATCACGTGTATTCTCCCAGTACTGCTaGCACAGGGCCTTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SKNSQYMNHITHIWGSRVFSQYC*HRAFFS Trigger: GGAGAAGAAGGCCCTGTGGCAGCAGTACTGGGAGAA...TACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTTTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR GCA 90 bp | AGTAAAAACTCTCAGTATATGAATCACATCACACATATTTGGGGATCACGTGTAATGTCCTCTGGCTCCTaGTGCTGCCAAGGTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SKNSQYMNHITHIWGSRVMSSGS*CCQGSS Trigger: AGAGGAACCTTGGCAGCAGCAGGAGCCAGAGGACAT...TACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTTTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CCA 90 bp | GGGCTGACTTTTGCACCAGTATATGTAGGGAAGGATTTCTGTAGACGTTTCCCTATCCTCATTATCATCTaGTCTTCTTTTCATCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GLTFAPVYVGKDFCRRFPILIII*SSFHRR Trigger: CCTCCGATGAAAAGAAGACCAGATGATAATGAGGAT...AGGGAAACGTCTACAGAAATCCTTCCCTACATATACTGGTGCAAAAGTCAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS-3UTR CCA 90 bp | GGGCTGACTTTTGCACCAGTATATGTAGGGAAGGATTTCTGTAGACGTTTCCCTTTATTGATGCTGCCTTaGTTCCTTTCATTATCACTG | + |
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Preference number: 4 (lower is better) Translates to: GLTFAPVYVGKDFCRRFPLLMLP*FLSLSL Trigger: CAGTGATAATGAAAGGAACCAAGGCAGCATCAATAA...AGGGAAACGTCTACAGAAATCCTTCCCTACATATACTGGTGCAAAAGTCAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS-3UTR CCA 90 bp | ATTCATATCAGAATGAGAAAATTCCACCCACATTTCTCCTCCTCACCAATGCTCTGTTCCTGTATGTCCTaGTCCTTCTTAATCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: IHIRMRKFHPHFSSSPMLCSCMS*SFLILF Trigger: GAAGAGGATTAAGAAGGACCAGGACATACAGGAACA...GAGCATTGGTGAGGAGGAGAAATGTGGGTGGAATTTTCTCATTCTGATATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS-3UTR TCA 90 bp | GGTAAAGCAACACAACAAAAGAATACAATGCCCATTGACCTCTTACTGAAAATAGTCGACTCTATAGCATaGTGTTCCTGTATGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GKATQQKNTMPIDLLLKIVDSIA*CSCMSW Trigger: CCAGGACATACAGGAACATCATGCTATAGAGTCGAC...TATTTTCAGTAAGAGGTCAATGGGCATTGTATTCTTTTGTTGTGTTGCTTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS-3UTR TCA 90 bp | TTTGCACCAGTATATGTAGGGAAGGATTTCTGTAGACGTTTCCCTTCTGAGGATGATGTTGTTAATATGTaGGTAAGGATCTTGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: FAPVYVGKDFCRRFPSEDDVVNM*VRILVL Trigger: CAAGACCAAGATCCTTACTCACATATTAACAACATC...ATCCTCAGAAGGGAAACGTCTACAGAAATCCTTCCCTACATATACTGGTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS CCA 90 bp | CAGCTGGCGCATGTCCTCTGGCTCCTGCTGCTGCCAAGGTTCCTCTaGCAGGGGGACGGGTCTGTTGGCTCCCAAGCTGAGGGTAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: QLAHVLWLLLLPRFL*QGDGSVGSQAEGKA Trigger: GGCCTTACCCTCAGCTTGGGAGCCAACAGACCCGTCCCCCTGCCAGAGGAACCTTGGCAGCAGCAGGAGCCAGAGGACATGCGCCAGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS GCA 90 bp | TTCTCCCAGTACTGCTGCCACAGGGCCTTCTTCTCCCGGGCCTGCTaGTGGAACAGCCCCTCTGACAGAGAAGCAGGGACACTGGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: FSQYCCHRAFFSRAC*WNSPSDREAGTLER Trigger: CCGCTCCAGTGTCCCTGCTTCTCTGTCAGAGGGGCTGTTCCAGCAGCAGGCCCGGGAGAAGAAGGCCCTGTGGCAGCAGTACTGGGAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS GCA 90 bp | TGCTTCTCCCAGTACTGCTGCCACAGGGCCTTCTTCTCCCGGGCCTaGTGCTGGAACAGCCCCTCTGACAGAGAAGCAGGGACACTGGAG | + |
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Preference number: 5 (lower is better) Translates to: CFSQYCCHRAFFSRA*CWNSPSDREAGTLE Trigger: CTCCAGTGTCCCTGCTTCTCTGTCAGAGGGGCTGTTCCAGCAGCAGGCCCGGGAGAAGAAGGCCCTGTGGCAGCAGTACTGGGAGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CAA 90 bp | CACATCACACATATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAAGGGGGACGGGTCTGTaGGCTCCCAAGCTGAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: HITHIWGSRVPRFLLYRLRGTGL*APKLRV Trigger: TACCCTCAGCTTGGGAGCCAACAGACCCGTCCCCCT...TAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAATATGTGTGATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS CCA 90 bp | CCTCTTCGAACGAGGGGGACGGTAGTTGTCATCCTCATTATCATCTaGTCTTCTTTTCATCGGAGGATCGTCCATCTTCGGAGGATCATC | + |
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Preference number: 5 (lower is better) Translates to: PLRTRGTVVVILIII*SSFHRRIVHLRRII Trigger: GATGATCCTCCGAAGATGGACGATCCTCCGATGAAAAGAAGACCAGATGATAATGAGGATGACAACTACCGTCCCCCTCGTTCGAAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS-3UTR CAA 90 bp | AAACTCTCAGTATATGAATCACATCACACATATTTGGGGATCACGTGTACCCAGAGGGGGACGGGTCTGTaGGCTCCCAAGCTGAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: KLSVYESHHTYLGITCTQRGTGL*APKLRV Trigger: TACCCTCAGCTTGGGAGCCAACAGACCCGTCCCCCT...CTGGGTACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CAA 90 bp | AACTCTCAGTATATGAATCACATCACACATATTTGGGGATCACGTGTACCCAGGCTGAGGGTAAGGCCATaGAGACCCTGCACCAGCATT | + |
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Preference number: 5 (lower is better) Translates to: NSQYMNHITHIWGSRVPRLRVRP*RPCTSI Trigger: AATGCTGGTGCAGGGTCTCAATGGCCTTACCCTCAG...CCTGGGTACACGTGATCCCCAAATATGTGTGATGTGATTCATATACTGAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CAA 90 bp | TTTCCAAGGACAATTCACATCATAGCACAAGTGTTGGGACACATCCACTGGCAGATGAGGGCACGGAAATaGACATTGGATCCCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: FPRTIHIIAQVLGHIHWQMRARK*TLDPIS Trigger: AGAAATGGGATCCAATGTCAATTTCCGTGCCCTCAT...CTGCCAGTGGATGTGTCCCAACACTTGTGCTATGATGTGAATTGTCCTTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CAA 90 bp | ATCACACATATTTGGGGATCACGTGTACCCAGGTTTCTTCTGTATAGGCTAACAGCACGGAAATTGACATaGGATCCCATTTCTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: ITHIWGSRVPRFLLYRLTARKLT*DPISAV Trigger: CACTGCAGAAATGGGATCCAATGTCAATTTCCGTGC...TGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCCAAATATGTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CAA 90 bp | AGGGTAGTTGAGATCTTTCCAAGGACAATTCACATCATAGCACAAGTGTTGGGAATGAGGGCACGGAAATaGACATTGGATCCCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: RVVEIFPRTIHIIAQVLGMRARK*TLDPIS Trigger: AGAAATGGGATCCAATGTCAATTTCCGTGCCCTCAT...TCCCAACACTTGTGCTATGATGTGAATTGTCCTTGGAAAGATCTCAACTACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CAA 90 bp | CATAAGACACCAATGCAGCACCTTCTAAATGTATTTATCATCTGTGAGTCAGCAGCACGGAAATTGACATaGGATCCCATTTCTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: HKTPMQHLLNVFIICESAARKLT*DPISAV Trigger: CACTGCAGAAATGGGATCCAATGTCAATTTCCGTGC...TGCTGACTCACAGATGATAAATACATTTAGAAGGTGCTGCATTGGTGTCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS-3UTR CAA 90 bp | GATAGCAGTGGTAAAGCAACACAACAAAAGAATACAATGCCCATTGACCTCTTAGTAAGGATCTTGGTCTaGGCACACTTCATAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: DSSGKATQQKNTMPIDLLVRILV*AHFIIL Trigger: GAGGATTATGAAGTGTGCCAAGACCAAGATCCTTAC...TAAGAGGTCAATGGGCATTGTATTCTTTTGTTGTGTTGCTTTACCACTGCTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS-3UTR CAA 90 bp | TCCTCATGCTGCTATTTTAACATGAATAGGACATCAGACATGACAGAAAACATAGTTATTGATGCTGCCTaGGTTCCTTTCATTATCACT | + |
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Preference number: 5 (lower is better) Translates to: SSCCYFNMNRTSDMTENIVIDAA*VPFIIT Trigger: AGTGATAATGAAAGGAACCAAGGCAGCATCAATAAC...TATGTTTTCTGTCATGTCTGATGTCCTATTCATGTTAAAATAGCAGCATGAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS GCA 72 bp | TGCCTCTCCAGCTGGCGCATGTCCTCTGGCTCCTGCTaGTGCCAAGGTTCCTCTGGCAGGGGGACGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: CLSSWRMSSGSC*CQGSSGRGTGL Trigger: CAGACCCGTCCCCCTGCCAGAGGAACCTTGGCAGCAGCAGGAGCCAGAGGACATGCGCCAGCTGGAGAGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS GCA 72 bp | CAGTACTGCTGCCACAGGGCCTTCTTCTCCCGGGCCTaGTGCTGGAACAGCCCCTCTGACAGAGAAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: QYCCHRAFFSRA*CWNSPSDREAG Trigger: CCCTGCTTCTCTGTCAGAGGGGCTGTTCCAGCAGCAGGCCCGGGAGAAGAAGGCCCTGTGGCAGCAGTACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS CCA 72 bp | TGCTGCCACAGGGCCTTCTTCTCCCGGGCCTGCTGCTaGAACAGCCCCTCTGACAGAGAAGCAGGGACACTG | + |
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Preference number: 6 (lower is better) Translates to: CCHRAFFSRACC*NSPSDREAGTL Trigger: CAGTGTCCCTGCTTCTCTGTCAGAGGGGCTGTTCCAGCAGCAGGCCCGGGAGAAGAAGGCCCTGTGGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS CCA 72 bp | CATGTCCTCTGGCTCCTGCTGCTGCCAAGGTTCCTCTaGCAGGGGGACGGGTCTGTTGGCTCCCAAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: HVLWLLLLPRFL*QGDGSVGSQAE Trigger: CTCAGCTTGGGAGCCAACAGACCCGTCCCCCTGCCAGAGGAACCTTGGCAGCAGCAGGAGCCAGAGGACATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS CAA 72 bp | TGCTGCCAAGGTTCCTCTGGCAGGGGGACGGGTCTGTaGGCTCCCAAGCTGAGGGTAAGGCCATTGAGACCC | + |
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Preference number: 6 (lower is better) Translates to: CCQGSSGRGTGL*APKLRVRPLRP Trigger: GGGTCTCAATGGCCTTACCCTCAGCTTGGGAGCCAACAGACCCGTCCCCCTGCCAGAGGAACCTTGGCAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS GCA 72 bp | TTGGCTCCCAAGCTGAGGGTAAGGCCATTGAGACCCTaGACCAGCATTTCCCAGGAGGGAGGGTTAGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LAPKLRVRPLRP*TSISQEGGLGA Trigger: GGCCCCTAACCCTCCCTCCTGGGAAATGCTGGTGCAGGGTCTCAATGGCCTTACCCTCAGCTTGGGAGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS CCA 72 bp | GAGGGGCTGCTGAGGCCTCTTGAGAGCTACTCACAGTaGCTATACATGAGGGCACGGAAATTGACATTGGAT | + |
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Preference number: 6 (lower is better) Translates to: EGLLRPLESYSQ*LYMRARKLTLD Trigger: ATCCAATGTCAATTTCCGTGCCCTCATGTATAGCCACTGTGAGTAGCTCTCAAGAGGCCTCAGCAGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS TCA 72 bp | GCTGATTCTGAGCTTTGTCACCTGAGGGAAAGCCTCTaGGATCCCTTTCAAGCAGGTAAGGTGCCATGTGAT | + |
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Preference number: 6 (lower is better) Translates to: ADSELCHLRESL*DPFQAGKVPCD Trigger: ATCACATGGCACCTTACCTGCTTGAAAGGGATCTCAGAGGCTTTCCCTCAGGTGACAAAGCTCAGAATCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059256.8 ENSMUST00000173996.8 |
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| CDS CCA 72 bp | ACGAGGGGGACGGTAGTTGTCATCCTCATTATCATCTaGTCTTCTTTTCATCGGAGGATCGTCCATCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: TRGTVVVILIII*SSFHRRIVHLR Trigger: CCGAAGATGGACGATCCTCCGATGAAAAGAAGACCAGATGATAATGAGGATGACAACTACCGTCCCCCTCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS CCA 72 bp | CTTCATAATCCTCCTCTTGGGAGAACCCAGGGATATTaGAGTCTAGTTCAGCAGTACTCGGGTTTAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LHNPPLGRTQGY*SLVQQYSGLSC Trigger: GCAGCTTAAACCCGAGTACTGCTGAACTAGACTCCAATATCCCTGGGTTCTCCCAAGAGGAGGATTATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS CAA 72 bp | CTCGGGTTTAAGCTGCTTTCTGGTACTCTCTCACGATaGGGGTTATTGATGCTGCCTTGGTTCCTTTCATTA | + |
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Preference number: 6 (lower is better) Translates to: LGFKLLSGTLSR*GLLMLPWFLSL Trigger: TAATGAAAGGAACCAAGGCAGCATCAATAACCCCAATCGTGAGAGAGTACCAGAAAGCAGCTTAAACCCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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| CDS CAA 72 bp | TGGTACTCTCTCACGATTGGGGTTATTGATGCTGCCTaGGTTCCTTTCATTATCACTGCTTGTCGACTCTAT | + |
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Preference number: 6 (lower is better) Translates to: WYSLTIGVIDAA*VPFIITACRLY Trigger: ATAGAGTCGACAAGCAGTGATAATGAAAGGAACCAAGGCAGCATCAATAACCCCAATCGTGAGAGAGTACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163233.2 |
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