Pregenerated sensors for TMEM28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071719Ensembl transcript IDs: ENSMUST00000096363.3
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACACTGTGTGCCTCATCCTGTGCCCGCCCCACACTCAGGGTGCTaGCAACGCTGGCAGGAGGGCAACCACACTGTCTGCCGTCACCTG | + |
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Preference number: 1 (lower is better) Translates to: SHCVPHPVPAPHSGC*QRWQEGNHTVCRHL Trigger: CAGGTGACGGCAGACAGTGTGGTTGCCCTCCTGCCAGCGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGATGAGGCACACAGTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CCA 90 bp | GGGATGGGGTATGTGGCCGGGCCCGAAGTGCTGAGGGCCAAAAGATaGAGGACACAGGGTCCAGGCAGAGGACAGGCTGTGAGATATGAG | + |
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Preference number: 1 (lower is better) Translates to: GMGYVAGPEVLRAKR*RTQGPGRGQAVRYE Trigger: CTCATATCTCACAGCCTGTCCTCTGCCTGGACCCTGTGTCCTCCATCTTTTGGCCCTCAGCACTTCGGGCCCGGCCACATACCCCATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR GCA 90 bp | CCCCAAGGCCAAGATTTCCAGGGCAGAGCAGCCCTAGGGAGTGTGTaGACCTTCTGTAAGATATGGCCCTCCAGACAGCGGCAGTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: PQGQDFQGRAALGSV*TFCKIWPSRQRQSN Trigger: GTTGGACTGCCGCTGTCTGGAGGGCCATATCTTACAGAAGGTGCACACACTCCCTAGGGCTGCTCTGCCCTGGAAATCTTGGCCTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR GCA 90 bp | CCTTCTGTAAGATATGGCCCTCCAGACAGCGGCAGTCCAACCATGTaGCCTCAACTTTCTGGGTGTTGGCTCCTGAGCTCCTTCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: PSVRYGPPDSGSPTM*PQLSGCWLLSSFPG Trigger: CCCTGGGAAGGAGCTCAGGAGCCAACACCCAGAAAGTTGAGGGCACATGGTTGGACTGCCGCTGTCTGGAGGGCCATATCTTACAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CCA 90 bp | CAGGGCAGAGCAGCCCTAGGGAGTGTGTGCACCTTCTGTAAGATATaGCCCTCCAGACAGCGGCAGTCCAACCATGTGCCCTCAACTTTC | + |
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Preference number: 1 (lower is better) Translates to: QGRAALGSVCTFCKI*PSRQRQSNHVPSTF Trigger: GAAAGTTGAGGGCACATGGTTGGACTGCCGCTGTCTGGAGGGCCATATCTTACAGAAGGTGCACACACTCCCTAGGGCTGCTCTGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR TCA 90 bp | GGGACCATATTGTCCCCCTTTGCTTCCCAGTCCTTTATCCCCTCCTaGGGATGCAGGCGTCAGAAGGCAGTACTGGGATCTCTCTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: GTILSPFASQSFIPS*GCRRQKAVLGSLWS Trigger: GCTCCAGAGAGATCCCAGTACTGCCTTCTGACGCCTGCATCCTCAGGAGGGGATAAAGGACTGGGAAGCAAAGGGGGACAATATGGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR GCA 90 bp | AGGCGTCAGAAGGCAGTACTGGGATCTCTCTGGAGCCCATGCCCCTaGCTTTCACTTACACAGAAGCACATCTGGGAAGGATCCAGCACC | + |
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Preference number: 1 (lower is better) Translates to: RRQKAVLGSLWSPCP*LSLTQKHIWEGSST Trigger: GGTGCTGGATCCTTCCCAGATGTGCTTCTGTGTAAGTGAAAGGCAGGGGCATGGGCTCCAGAGAGATCCCAGTACTGCCTTCTGACGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR GCA 90 bp | GGATGCAGGCGTCAGAAGGCAGTACTGGGATCTCTCTGGAGCCCATaGCCCTGCCTTTCACTTACACAGAAGCACATCTGGGAAGGATCC | + |
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Preference number: 1 (lower is better) Translates to: GCRRQKAVLGSLWSP*PCLSLTQKHIWEGS Trigger: GGATCCTTCCCAGATGTGCTTCTGTGTAAGTGAAAGGCAGGGGCATGGGCTCCAGAGAGATCCCAGTACTGCCTTCTGACGCCTGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CCA 90 bp | CCCAGGCCAGGCCTGACGCACTTGGACTCAAGTCCCTACTCCCTGTaGAGATTGGAAATGAAAGGTCTGTGGCCCCAAGGCCAAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: PRPGLTHLDSSPYSL*RLEMKGLWPQGQDF Trigger: GAAATCTTGGCCTTGGGGCCACAGACCTTTCATTTCCAATCTCCACAGGGAGTAGGGACTTGAGTCCAAGTGCGTCAGGCCTGGCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR TCA 90 bp | TCCCTCAGTGGGACAATAGGCCACAAGGTCAGGGATGGGAAGGGATaGATACTCTTTGGTAGGCTGGGGATGGACACAGGATGGGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: SLSGTIGHKVRDGKG*ILFGRLGMDTGWGR Trigger: CCTACCCCATCCTGTGTCCATCCCCAGCCTACCAAAGAGTATTCATCCCTTCCCATCCCTGACCTTGTGGCCTATTGTCCCACTGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CCA 90 bp | GACTCAAGTCCCTACTCCCTGTGGAGATTGGAAATGAAAGGTCTGTaGCCCCAAGGCCAAGATTTCCAGGGCAGAGCAGCCCTAGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: DSSPYSLWRLEMKGL*PQGQDFQGRAALGS Trigger: ACTCCCTAGGGCTGCTCTGCCCTGGAAATCTTGGCCTTGGGGCCACAGACCTTTCATTTCCAATCTCCACAGGGAGTAGGGACTTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR TCA 90 bp | AAGATGGAGGACACAGGGTCCAGGCAGAGGACAGGCTGTGAGATATaGGTAAACTGGCAGAGAAACGGGCTCCGTAGGCTCAAGAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: KMEDTGSRQRTGCEI*VNWQRNGLRRLKKL Trigger: CAGCTTCTTGAGCCTACGGAGCCCGTTTCTCTGCCAGTTTACTCATATCTCACAGCCTGTCCTCTGCCTGGACCCTGTGTCCTCCATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR TCA 90 bp | AGGCCAAAGGCTCCCAAGCCTCATCTCTCACTCATCCCTTTAGCCTaGCTAAATGAGTTCCTCGGGCAAGGGTTAGCAGCAGCACTTTAT | + |
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Preference number: 1 (lower is better) Translates to: RPKAPKPHLSLIPLA*LNEFLGQGLAAALY Trigger: ATAAAGTGCTGCTGCTAACCCTTGCCCGAGGAACTCATTTAGTCAGGCTAAAGGGATGAGTGAGAGATGAGGCTTGGGAGCCTTTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR TCA 90 bp | AATGCTGCTCCAGGACTGTCCTCCTGTATGCATCCTTTTGGTCTCTaGAAGCCATTGGCCTATCCCACAAAGAATCGGGCTCCTGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: NAAPGLSSCMHPFGL*KPLAYPTKNRAPVL Trigger: AAGAACAGGAGCCCGATTCTTTGTGGGATAGGCCAATGGCTTTCAGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR GCA 90 bp | CCCTCCTGTTTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATaGATCCTTTTGGTCTCTGAAAGCCATTGGCCTATCCCACAAAGA | + |
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Preference number: 1 (lower is better) Translates to: PSCFSVMLLQDCPPV*ILLVSESHWPIPQR Trigger: TCTTTGTGGGATAGGCCAATGGCTTTCAGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAAACAGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CCA 90 bp | GCCTATCCCACAAAGAATCGGGCTCCTGTTCTTGTCAGCTTGCATTaGCTTTTAGATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: AYPTKNRAPVLVSLH*LLDTQAMCPSFSSS Trigger: GCTGGAAGAAAAGGAAGGACACATTGCCTGGGTATCTAAAAGCCAATGCAAGCTGACAAGAACAGGAGCCCGATTCTTTGTGGGATAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CCA 90 bp | CCTGAGCTCCTTCCCAGGGATCTCTTTATGCATTTCCTTCTTATTTaGGGGGCCACTCTTGAATCTATCTGCCTCAACACTAATCACCCA | + |
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Preference number: 1 (lower is better) Translates to: PELLPRDLFMHFLLI*GATLESICLNTNHP Trigger: TGGGTGATTAGTGTTGAGGCAGATAGATTCAAGAGTGGCCCCCCAAATAAGAAGGAAATGCATAAAGAGATCCCTGGGAAGGAGCTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CAA 90 bp | TGGGCAAGGCCTTGGGCTGGTCTGAGCCAGGGGTCTCCTGGGCACTaGGTGAGGGGGAAGAGAGGATGGGAGTCTCCAAGGGTCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: WARPWAGLSQGSPGH*VRGKRGWESPRVHS Trigger: GGAATGGACCCTTGGAGACTCCCATCCTCTCTTCCCCCTCACCAAGTGCCCAGGAGACCCCTGGCTCAGACCAGCCCAAGGCCTTGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR TCA 90 bp | GTCACACTGTGTGCCTCATCCTGTGCCCGCCCCACACTCAGGGTGCTGACAACGCATTCCCTGCAGGGCTaGGGCTGGGTAAGCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VTLCASSCARPTLRVLTTHSLQG*GWVSSL Trigger: GAGGCTGCTTACCCAGCCTCAGCCCTGCAGGGAATG...CGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGATGAGGCACACAGTGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTAGCTGTCACACTGTGTGCCTCATCCTGTGCCCGCCCCACACTCAGGGTGGCTCTTGGCAGGAGTaGGCAACTCCAGCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LPSCHTVCLILCPPHTQGGSWQE*ATPAPP Trigger: GGGAGGGGCTGGAGTTGCCCACTCCTGCCAAGAGCC...ACCCTGAGTGTGGGGCGGGCACAGGATGAGGCACACAGTGTGACAGCTAGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTGCCCGCCCCACACTCAGGGTGCTGACAACGCTGGCAGGAGGGCAACCAGGAGGGGACACCTGCTaGTCCTACCTTTTTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SCARPTLRVLTTLAGGQPGGDTC*SYLFLL Trigger: CAGGAGAAAAAGGTAGGAGCAGCAGGTGTCCCCTCC...TGGTTGCCCTCCTGCCAGCGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | CCGCCCCACACTCAGGGTGCTGACAACGCTGGCAGGAGGGCAACCACACTGTCTTCCTTGGGGGCCCTCTaGCCATTTTGTTGGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PPHTQGADNAGRRATTLSSLGAL*PFCWSC Trigger: GCAGCTCCAACAAAATGGCCAGAGGGCCCCCAAGGA...AGACAGTGTGGTTGCCCTCCTGCCAGCGTTGTCAGCACCCTGAGTGTGGGGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGTTGGGTCGATGGGGACAGTCAAATGACTGTGAGGTGGAGTGTGGTGCCCCTTTCCCCTGCCACTaGGCAAGGCCTTGGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RELGRWGQSNDCEVECGAPFPCH*ARPWAG Trigger: ACCAGCCCAAGGCCTTGCCCAGTGGCAGGGGAAAGG...GGCACCACACTCCACCTCACAGTCATTTGACTGTCCCCATCGACCCAACTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | GTCACACTGTGTGCCTCATCCTGTGCCCGCCCCACACTCAGGGTGCTGACAACGGATGTCAGTATGTGGTaGAGGTTTGTCCTCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: VTLCASSCARPTLRVLTTDVSMW*RFVLPP Trigger: GGGAGGGAGGACAAACCTCCACCACATACTGACATC...CGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGATGAGGCACACAGTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR TCA 90 bp | GGTATCATTAGTGTAGCCATCTCTTCAGGCCACCTCTCCCCTTTCTTCTCCCCTCCACACTCAGGGTGCTaGCAACGCTGGCAGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GIISVAISSGHLSPFFSPPHSGC*QRWQEG Trigger: GCCCTCCTGCCAGCGTTGTCAGCACCCTGAGTGTGG...AGGGGAGAAGAAAGGGGAGAGGTGGCCTGAAGAGATGGCTACACTAATGATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTGTAGGGACCCAGGCCAGGCCTGACGCACTTGGACTCAAGTCCCTACTCGCTGATGTCAGTATGTaGTGGAGGTTTGTCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GSVGTQARPDALGLKSLLADVSM*WRFVLP Trigger: AGGGAGGACAAACCTCCACCACATACTGACATCAGC...GAGTAGGGACTTGAGTCCAAGTGCGTCAGGCCTGGCCTGGGTCCCTACACTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CAA 90 bp | CCAGGCCTGACGCACTTGGACTCAAGTCCCTACTCCCTGTGGAGATaGGAAATGAAAGGTCTGTGGCCCCAAGGCCAAGATTTCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PGLTHLDSSPYSLWR*EMKGLWPQGQDFQG Trigger: GCCCTGGAAATCTTGGCCTTGGGGCCACAGACCTTTCATTTCCAATCTCCACAGGGAGTAGGGACTTGAGTCCAAGTGCGTCAGGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCTGGTCTGAGCCAGGGGTCTCCTGGGCACTTGGTGAGGGGGAAGAGAGGCCTACCTTTTTCTCCTaGGTGAGTTTTACAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LGWSEPGVSWALGEGEERPTFFS*VSFTAP Trigger: AGGAGCTGTAAAACTCACCCAGGAGAAAAAGGTAGG...CCTCTCTTCCCCCTCACCAAGTGCCCAGGAGACCCCTGGCTCAGACCAGCCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCCTCCTGTTTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATGCATTGGGGTCAGGGCTCTTaGCAGGAGTGGGCAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: PPLLFLCNAAPGLSSCMHWGQGS*QEWATP Trigger: TGGAGTTGCCCACTCCTGCCAAGAGCCCTGACCCCA...ATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAAACAGGAGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | GTAGAAAATGGCATAAGAAAGCCGCCCAGCTCTGCTGCCTGTGACGGAGGGCAGAGGGGGAAGAGAGGATaGGAGTCTCCAAGGGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: VENGIRKPPSSAACDGGQRGKRG*ESPRVH Trigger: ATGGACCCTTGGAGACTCCCATCCTCTCTTCCCCCT...CTGCCCTCCGTCACAGGCAGCAGAGCTGGGCGGCTTTCTTATGCCATTTTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR GCA 90 bp | GGTATCATTAGTGTAGCCATCTCTTCAGGCCACCTCTCCCCTTTCTTCTCCCCTACCTCCTGTGGGAGATaGTTCCTTCCCCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GIISVAISSGHLSPFFSPTSCGR*FLPPAW Trigger: CCAGGCTGGGGGAAGGAAGCATCTCCCACAGGAGGT...AGGGGAGAAGAAAGGGGAGAGGTGGCCTGAAGAGATGGCTACACTAATGATACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCCTCCCCTCCTGTTTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTACCTTTTTCTCCTGGGTaGGTTTTACAGCTCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LPLPSCFSVMLLQDCPPVPFSPG*VLQLLG Trigger: CCCAAGGAGCTGTAAAACTCACCCAGGAGAAAAAGG...TACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAAACAGGAGGGGAGGGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTTAAACAAGAGCAGAGATGTCTCTGCCCCACAGTGCAACAAAATAGAAAGCACTAAGCCCCAAAGGTaGGGCTTGGGAGGGGACACC | + |
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Preference number: 2 (lower is better) Translates to: GLNKSRDVSAPQCNKIESTKPQR*GLGGDT Trigger: GGTGTCCCCTCCCAAGCCCCACCTTTGGGGCTTAGT...GCTTTCTATTTTGTTGCACTGTGGGGCAGAGACATCTCTGCTCTTGTTTAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAAGGGACCTGCTAAAGGGTGAGGAGGAGTCTAGCTGTCCCTCAGTGGGAGAAATGAAAGGTCTGTaGCCCCAAGGCCAAGATTTC | + |
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Preference number: 2 (lower is better) Translates to: RERDLLKGEEESSCPSVGEMKGL*PQGQDF Trigger: GAAATCTTGGCCTTGGGGCCACAGACCTTTCATTTC...TCCCACTGAGGGACAGCTAGACTCCTCCTCACCCTTTAGCAGGTCCCTTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | GATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAGCAGGTCAGTGCAAGCAAGGTACTCTTTGGTAGGCTaGGGATGGACACAGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: DTQAMCPSFSSSRSVQARYSLVG*GWTQDG Trigger: CCCATCCTGTGTCCATCCCCAGCCTACCAAAGAGTA...CCTTGCTTGCACTGACCTGCTGGAAGAAAAGGAAGGACACATTGCCTGGGTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTTAAACAAGAGCAGAGATGTCTCTGCCCCACAGTGCAACAAAATAGAAAGCAGCAAGGGCAAGGGGTaGCTAGAGAAAGGGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: GLNKSRDVSAPQCNKIESSKGKG*LEKGTC Trigger: GCAGGTCCCTTTCTCTAGCCACCCCTTGCCCTTGCT...GCTTTCTATTTTGTTGCACTGTGGGGCAGAGACATCTCTGCTCTTGTTTAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTGCCTTTCACTTACACAGAAGCACATCTGGGAAGGATCCAGCACCTCGTCTGTATGCATCCTTTTaGTCTCTGAAAGCCATTGGC | + |
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Preference number: 2 (lower is better) Translates to: APAFHLHRSTSGKDPAPRLYASF*SLKAIG Trigger: GCCAATGGCTTTCAGAGACCAAAAGGATGCATACAG...ACGAGGTGCTGGATCCTTCCCAGATGTGCTTCTGTGTAAGTGAAAGGCAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CAA 90 bp | TTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATGCATCCTTTaGGTCTCTGAAAGCCATTGGCCTATCCCACAAAGAATCGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: FSVMLLQDCPPVCIL*VSESHWPIPQRIGL Trigger: GAGCCCGATTCTTTGTGGGATAGGCCAATGGCTTTCAGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTACACAGAAGCACATCTGGGAAGGATCCAGCACCTCGTACCCTCCCCAACAGGCTGTGAGATATaGGTAAACTGGCAGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: FTYTEAHLGRIQHLVPSPTGCEI*VNWQRN Trigger: GTTTCTCTGCCAGTTTACTCATATCTCACAGCCTGT...TGGGGAGGGTACGAGGTGCTGGATCCTTCCCAGATGTGCTTCTGTGTAAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGCACTTTATCTCCAGTCAGAGTCCTCTTGCCAGCCTCTGAACTTTGTAGTTTTACAGCTCCTTaGGGGCCCTCTGGCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSTLSPVRVLLPASELCSFTAP*GPSGHF Trigger: AAAATGGCCAGAGGGCCCCCAAGGAGCTGTAAAACT...ACAAAGTTCAGAGGCTGGCAAGAGGACTCTGACTGGAGATAAAGTGCTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATGCATCCTTTTGGTCTCTATCTCTGGAGAGCTCTaGGGTAACACCACCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FSVMLLQDCPPVCILLVSISGEL*GNTTSS Trigger: AGAGCTGGTGGTGTTACCCCAGAGCTCTCCAGAGAT...AGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CAA 90 bp | GGCCTATCCCACAAAGAATCGGGCTCCTGTTCTTGTCAGCTTGCATaGGCTTTTAGATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GLSHKESGSCSCQLA*AFRYPGNVSFLFFQ Trigger: CTGGAAGAAAAGGAAGGACACATTGCCTGGGTATCTAAAAGCCAATGCAAGCTGACAAGAACAGGAGCCCGATTCTTTGTGGGATAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR-3UTR GCA 90 bp | TTTAGATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAGCAGGTCAGTGCAAGCCAGTCAGAGTCCTCTTaGCAGCCTCTGAACTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: FRYPGNVSFLFFQQVSASQSESS*QPLNFV Trigger: GACAAAGTTCAGAGGCTGGCAAGAGGACTCTGACTG...GCTTGCACTGACCTGCTGGAAGAAAAGGAAGGACACATTGCCTGGGTATCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR TCA 72 bp | GTGCCTCATCCTGTGCCCGCCCCACACTCAGGGTGCTaGCAACGCTGGCAGGAGGGCAACCACACTGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: VPHPVPAPHSGC*QRWQEGNHTVC Trigger: GCAGACAGTGTGGTTGCCCTCCTGCCAGCGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGATGAGGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR TCA 72 bp | CAGCTCTCCTTCATGGAGGCCTGGGCTAGGACAAGATaGGGGAGTGTAGGGACCCAGGCCAGGCCTGACGCA | + |
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Preference number: 3 (lower is better) Translates to: QLSFMEAWARTR*GSVGTQARPDA Trigger: TGCGTCAGGCCTGGCCTGGGTCCCTACACTCCCTCATCTTGTCCTAGCCCAGGCCTCCATGAAGGAGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR GCA 72 bp | CACCTTCCTAGCTGTCACACTGTGTGCCTCATCCTGTaGCCGCCCCACACTCAGGGTGCTGACAACGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: HLPSCHTVCLIL*PPHTQGADNAG Trigger: GCCAGCGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGATGAGGCACACAGTGTGACAGCTAGGAAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| 3UTR CCA 72 bp | TATGTGGCCGGGCCCGAAGTGCTGAGGGCCAAAAGATaGAGGACACAGGGTCCAGGCAGAGGACAGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YVAGPEVLRAKR*RTQGPGRGQAV Trigger: CACAGCCTGTCCTCTGCCTGGACCCTGTGTCCTCCATCTTTTGGCCCTCAGCACTTCGGGCCCGGCCACATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR TCA 72 bp | GACAAGATGAGGGAGTGTAGGGACCCAGGCCAGGCCTaGCGCACTTGGACTCAAGTCCCTACTCCCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DKMRECRDPGQA*RTWTQVPTPCG Trigger: TCCACAGGGAGTAGGGACTTGAGTCCAAGTGCGTCAGGCCTGGCCTGGGTCCCTACACTCCCTCATCTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CCA 72 bp | GCAGCCCTAGGGAGTGTGTGCACCTTCTGTAAGATATaGCCCTCCAGACAGCGGCAGTCCAACCATGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AALGSVCTFCKI*PSRQRQSNHVP Trigger: GGGCACATGGTTGGACTGCCGCTGTCTGGAGGGCCATATCTTACAGAAGGTGCACACACTCCCTAGGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CCA 72 bp | GGGTCTCCTGGGCACTTGGTGAGGGGGAAGAGAGGATaGGAGTCTCCAAGGGTCCATTCCCTGGGACCATAT | + |
|
Preference number: 3 (lower is better) Translates to: GSPGHLVRGKRG*ESPRVHSLGPY Trigger: ATATGGTCCCAGGGAATGGACCCTTGGAGACTCCCATCCTCTCTTCCCCCTCACCAAGTGCCCAGGAGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGCTGGTCTGAGCCAGGGGTCTCCTGGGCACTTGGTGAGGGGGAAGAGAGGATCCAACAGTGGCCCTaGAATGAAGGAACCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGWSEPGVSWALGEGEERIQQWP*NEGTLV Trigger: GACAAGGGTTCCTTCATTCAAGGGCCACTGTTGGAT...CCTCTCTTCCCCCTCACCAAGTGCCCAGGAGACCCCTGGCTCAGACCAGCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAGAAAATGGCATAAGAAAGCCGCCCAGCTCTGCTGCCTGTGACGGAGGGCAGAGTTCCAATCCCTCATaGCCTAGGGTGGTGGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VENGIRKPPSSAACDGGQSSNPS*PRVVGA Trigger: TGCCCCCACCACCCTAGGCAATGAGGGATTGGAACT...CTGCCCTCCGTCACAGGCAGCAGAGCTGGGCGGCTTTCTTATGCCATTTTCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGCTGGTCTGAGCCAGGGGTCTCCTGGGCACTTGGTGAGGGGGAAGAGAGGTACTCCCTGTGGAGATaGGAAATGAAAGGTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGWSEPGVSWALGEGEERYSLWR*EMKGLW Trigger: CCACAGACCTTTCATTTCCAATCTCCACAGGGAGTA...CCTCTCTTCCCCCTCACCAAGTGCCCAGGAGACCCCTGGCTCAGACCAGCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CCA 72 bp | CCATGCCCCTGCCTTTCACTTACACAGAAGCACATCTaGGAAGGATCCAGCACCTCGTACCCTCCCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PCPCLSLTQKHI*EGSSTSYPPQL Trigger: CAGCTGGGGAGGGTACGAGGTGCTGGATCCTTCCCAGATGTGCTTCTGTGTAAGTGAAAGGCAGGGGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CCA 72 bp | CAGCTGGGGAGGTGGAGGAGTAGGGAGTTGGGTCGATaGGGACAGTCAAATGACTGTGAGGTGGAGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QLGRWRSRELGR*GQSNDCEVECG Trigger: ACCACACTCCACCTCACAGTCATTTGACTGTCCCCATCGACCCAACTCCCTACTCCTCCACCTCCCCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGTTGGGTCGATGGGGACAGTCAAATGACTGTGAGGTGGAGTGTGGTGCCTCAACTTTCTGGGTGTaGGCTCCTGAGCTCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RELGRWGQSNDCEVECGASTFWV*APELLP Trigger: GGGAAGGAGCTCAGGAGCCAACACCCAGAAAGTTGA...GGCACCACACTCCACCTCACAGTCATTTGACTGTCCCCATCGACCCAACTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR TCA 72 bp | GACACAGGGTCCAGGCAGAGGACAGGCTGTGAGATATaGGTAAACTGGCAGAGAAACGGGCTCCGTAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DTGSRQRTGCEI*VNWQRNGLRRL Trigger: GAGCCTACGGAGCCCGTTTCTCTGCCAGTTTACTCATATCTCACAGCCTGTCCTCTGCCTGGACCCTGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CCA 72 bp | GGCCTGACGCACTTGGACTCAAGTCCCTACTCCCTGTaGAGATTGGAAATGAAAGGTCTGTGGCCCCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLTHLDSSPYSL*RLEMKGLWPQG Trigger: GCCTTGGGGCCACAGACCTTTCATTTCCAATCTCCACAGGGAGTAGGGACTTGAGTCCAAGTGCGTCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CCA 72 bp | GGATGCAGGCGTCAGAAGGCAGTACTGGGATCTCTCTaGAGCCCATGCCCCTGCCTTTCACTTACACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GCRRQKAVLGSL*SPCPCLSLTQK Trigger: CTTCTGTGTAAGTGAAAGGCAGGGGCATGGGCTCCAGAGAGATCCCAGTACTGCCTTCTGACGCCTGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR GCA 72 bp | CGTCAGAAGGCAGTACTGGGATCTCTCTGGAGCCCATaGCCCTGCCTTTCACTTACACAGAAGCACATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RQKAVLGSLWSP*PCLSLTQKHIW Trigger: CCAGATGTGCTTCTGTGTAAGTGAAAGGCAGGGGCATGGGCTCCAGAGAGATCCCAGTACTGCCTTCTGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR GCA 72 bp | CAAGGGTCCATTCCCTGGGACCATATTGTCCCCCTTTaGTTCCCAGTCCTTTATCCCCTCCTGAGGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGSIPWDHIVPL*FPVLYPLLRMQ Trigger: CTGCATCCTCAGGAGGGGATAAAGGACTGGGAAGCAAAGGGGGACAATATGGTCCCAGGGAATGGACCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CCA 72 bp | GGAAGAGAGGATGGGAGTCTCCAAGGGTCCATTCCCTaGGACCATATTGTCCCCCTTTGCTTCCCAGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GREDGSLQGSIP*DHIVPLCFPVL Trigger: AAGGACTGGGAAGCAAAGGGGGACAATATGGTCCCAGGGAATGGACCCTTGGAGACTCCCATCCTCTCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTGCCGTCACCTGTAGGGATATGGGCAGGAGGGAATTAAGGATCTTGGCAGAGTTTTACAGCTCCTaGGGGGCCCTCTGGCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LSAVTCRDMGRRELRILAEFYSS*GALWPF Trigger: AAATGGCCAGAGGGCCCCCAAGGAGCTGTAAAACTC...TGCCAAGATCCTTAATTCCCTCCTGCCCATATCCCTACAGGTGACGGCAGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR GCA 72 bp | AAGGCAGTACTGGGATCTCTCTGGAGCCCATGCCCCTaGCTTTCACTTACACAGAAGCACATCTGGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KAVLGSLWSPCP*LSLTQKHIWEG Trigger: TCCTTCCCAGATGTGCTTCTGTGTAAGTGAAAGGCAGGGGCATGGGCTCCAGAGAGATCCCAGTACTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTTACACAGAAGCACATCTGGGAAGGATCCAGCACCTCGTACCCTCCCCACCTCTGGCCATTTTGTaGGAGCTGCTTTTAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FTYTEAHLGRIQHLVPSPPLAIL*ELLLGQ Trigger: CTGCCCTAAAAGCAGCTCCAACAAAATGGCCAGAGG...TGGGGAGGGTACGAGGTGCTGGATCCTTCCCAGATGTGCTTCTGTGTAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCTGCCTTTCACTTACACAGAAGCACATCTGGGAAGGATCCAGCACCTCGTAGGGATGAATACTCTTaGGTAGGCTGGGGATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: APAFHLHRSTSGKDPAPRRDEYS*VGWGWT Trigger: TGTCCATCCCCAGCCTACCAAAGAGTATTCATCCCT...ACGAGGTGCTGGATCCTTCCCAGATGTGCTTCTGTGTAAGTGAAAGGCAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR TCA 72 bp | TGGACTCAAGTCCCTACTCCCTGTGGAGATTGGAAATaGAAGGTCTGTGGCCCCAAGGCCAAGATTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WTQVPTPCGDWK*KVCGPKAKISR Trigger: CCTGGAAATCTTGGCCTTGGGGCCACAGACCTTTCATTTCCAATCTCCACAGGGAGTAGGGACTTGAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR TCA 72 bp | GCTCCCAAGCCTCATCTCTCACTCATCCCTTTAGCCTaGCTAAATGAGTTCCTCGGGCAAGGGTTAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: APKPHLSLIPLA*LNEFLGQGLAA Trigger: TGCTGCTAACCCTTGCCCGAGGAACTCATTTAGTCAGGCTAAAGGGATGAGTGAGAGATGAGGCTTGGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR TCA 72 bp | AAGAAGCTGATTTGGGATCCAACAGTGGCCCTTGAATaGAGGAACCCTTGTCTGCTAGGGAGGGCGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: KKLIWDPTVALE*RNPCLLGRASI Trigger: GATGGACGCCCTCCCTAGCAGACAAGGGTTCCTTCATTCAAGGGCCACTGTTGGATCCCAAATCAGCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCCTCCTGTTTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATGCATAGGGAATTAAGGATCTaGGCAACGGAAGGAATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PPLLFLCNAAPGLSSCMHRELRI*ATEGMW Trigger: CCACATTCCTTCCGTTGCCAAGATCCTTAATTCCCT...ATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAAACAGGAGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR TCA 72 bp | CAACCATGTGCCCTCAACTTTCTGGGTGTTGGCTCCTaGGCTCCTTCCCAGGGATCTCTTTATGCATTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QPCALNFLGVGS*APSQGSLYAFP Trigger: AGGAAATGCATAAAGAGATCCCTGGGAAGGAGCTCAGGAGCCAACACCCAGAAAGTTGAGGGCACATGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CCA 72 bp | CCTCCTGTATGCATCCTTTTGGTCTCTGAAAGCCATTaGCCTATCCCACAAAGAATCGGGCTCCTGTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PPVCILLVSESH*PIPQRIGLLFL Trigger: CAAGAACAGGAGCCCGATTCTTTGTGGGATAGGCCAATGGCTTTCAGAGACCAAAAGGATGCATACAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CCA 72 bp | TGCTGCTCCAGGACTGTCCTCCTGTATGCATCCTTTTaGTCTCTGAAAGCCATTGGCCTATCCCACAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CCSRTVLLYASF*SLKAIGLSHKE Trigger: TTCTTTGTGGGATAGGCCAATGGCTTTCAGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAAAATAGAAAGCAGTACACGTACAGACACTCTCACTGAAACACGGAGGCTGGGCCCTCTGGCCATTTaGTTGGAGCTGCTTTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: NKIESSTRTDTLTETRRLGPLAI*LELLLG Trigger: CCCTAAAAGCAGCTCCAACAAAATGGCCAGAGGGCC...CAGCCTCCGTGTTTCAGTGAGAGTGTCTGTACGTGTACTGCTTTCTATTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR GCA 72 bp | TTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATaGATCCTTTTGGTCTCTGAAAGCCATTGGCCTATC | + |
|
Preference number: 3 (lower is better) Translates to: FSVMLLQDCPPV*ILLVSESHWPI Trigger: GATAGGCCAATGGCTTTCAGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | CCGCCCCACACTCAGGGTGCTGACAACGCTGGCAGGAGGGCAACCACACTGTCTGCTCTGGGACGCCGTTaGAGACCGGCCCGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PPHTQGADNAGRRATTLSALGRR*RPARSR Trigger: CCGGCTCCGGGCCGGTCTGCAACGGCGTCCCAGAGC...AGACAGTGTGGTTGCCCTCCTGCCAGCGTTGTCAGCACCCTGAGTGTGGGGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGCTGGTCTGAGCCAGGGGTCTCCTGGGCACTTGGTGAGGGGGAAGAGAGGGGATCCTGCTGGGACTaGGGCGGGAGCCCCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGWSEPGVSWALGEGEERGSCWD*GGSPQR Trigger: TCTCTGGGGGCTCCCGCCTCAGTCCCAGCAGGATCC...CCTCTCTTCCCCCTCACCAAGTGCCCAGGAGACCCCTGGCTCAGACCAGCCCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCTCCTGAGGATGCAGGCGTCAGAAGGCAGTACTGGGATCTCTCTGGAGCCCGGCCCGGAGCCGGCTaGAGGGGCGGCTTTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPEDAGVRRQYWDLSGARPGAG*RGGFGQ Trigger: CTGACCAAAGCCGCCCCTGCAGCCGGCTCCGGGCCG...GGCTCCAGAGAGATCCCAGTACTGCCTTCTGACGCCTGCATCCTCAGGAGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGTGCCCGCCCCACACTCAGGGTGCTGACAACGCTGGCAGGAGGGCAACCACCCCACCACTCTGGCTaGTGGAGAAGGACACTACGG | + |
|
Preference number: 4 (lower is better) Translates to: SCARPTLRVLTTLAGGQPPHHSG*WRRTLR Trigger: CCGTAGTGTCCTTCTCCAGCAGCCAGAGTGGTGGGG...TGGTTGCCCTCCTGCCAGCGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CAA 72 bp | CCTTGGGCTGGTCTGAGCCAGGGGTCTCCTGGGCACTaGGTGAGGGGGAAGAGAGGATGGGAGTCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWAGLSQGSPGH*VRGKRGWESPR Trigger: CCTTGGAGACTCCCATCCTCTCTTCCCCCTCACCAAGTGCCCAGGAGACCCCTGGCTCAGACCAGCCCAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGTAGGGACCCAGGCCAGGCCTGACGCACTTGGACTCAAGTCCCTACTCGTTTGTCGCTCTGCCTaGGAGCCCAGCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSVGTQARPDALGLKSLLVCRSA*EPSSSS Trigger: GCTGCTGCTGCTGGGCTCCCAGGCAGAGCGACAAAC...GAGTAGGGACTTGAGTCCAAGTGCGTCAGGCCTGGCCTGGGTCCCTACACTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCCACCCCCACCTGATCCTACACCTCCTGTGGGAGATGCTTCCTTCCCCGCAGGGTGTCCAAACTaGAGTCCAGGCTGTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSPPPPDPTPPVGDASFPAGCPN*SPGCRG Trigger: GCCCCGACAGCCTGGACTGCAGTTTGGACACCCTGC...GGGGAAGGAAGCATCTCCCACAGGAGGTGTAGGATCAGGTGGGGGTGGGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCTAGCTGTCACACTGTGTGCCTCATCCTGTGCCCGCCCCACACTCAGGGTGCGCACAGCCACAGATaGTCAGCGAGCAGCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSCHTVCLILCPPHTQGAHSHR*SASSTV Trigger: CACCGTGCTGCTCGCTGACCATCTGTGGCTGTGCGC...ACCCTGAGTGTGGGGCGGGCACAGGATGAGGCACACAGTGTGACAGCTAGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCTCCTGAGGATGCAGGCGTCAGAAGGCAGTACTGGGATCTCTCTGGAGCCCCAGGCAGTATTGCTTaGAGGGCACCCAGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPEDAGVRRQYWDLSGAPGSIA*RAPSSG Trigger: GCCAGAACTGGGTGCCCTGCAAGCAATACTGCCTGG...GGCTCCAGAGAGATCCCAGTACTGCCTTCTGACGCCTGCATCCTCAGGAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTGGTCTGAGCCAGGGGTCTCCTGGGCACTTGGTGAGGGGGAAGAGAGGCACCACTCTGGCTGCTaGAGAAGGACACTACGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LGWSEPGVSWALGEGEERHHSGC*RRTLRY Trigger: ATACCGTAGTGTCCTTCTCCAGCAGCCAGAGTGGTG...CCTCTCTTCCCCCTCACCAAGTGCCCAGGAGACCCCTGGCTCAGACCAGCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | GGCAGTCCAACCATGTGCCCTCAACTTTCTGGGTGTTGGCTCCTGAGCTCCTTCCAATTTGGTGCAAGCTaGGTCCAGCCCGGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPTMCPQLSGCWLLSSFQFGAS*VQPGGL Trigger: GAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTG...GAAGGAGCTCAGGAGCCAACACCCAGAAAGTTGAGGGCACATGGTTGGACTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | GTCACACTGTGTGCCTCATCCTGTGCCCGCCCCACACTCAGGGTGCTGACAACGTATGCAATTGCTACATaGCTCCCAGGTCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTLCASSCARPTLRVLTTYAIAT*LPGPRA Trigger: GGCTCTGGGACCTGGGAGGCATGTAGCAATTGCATA...CGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGATGAGGCACACAGTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | AGGGAGTTGGGTCGATGGGGACAGTCAAATGACTGTGAGGTGGAGTGTGGTGCCAAGGGGCACCGGGTCTaGACCTCCAGGCAGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RELGRWGQSNDCEVECGAKGHRV*TSRQYC Trigger: GCAATACTGCCTGGAGGTGCAGACCCGGTGCCCCTT...GGCACCACACTCCACCTCACAGTCATTTGACTGTCCCCATCGACCCAACTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAGGGACCTGCTAAAGGGTGAGGAGGAGTCTAGCTGTCCCTCAGTGGGAGGGAGGGCTTGTTGCTaGCTCGGCTTGGGGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RERDLLKGEEESSCPSVGGRACC*LGLGVH Trigger: ATGAACCCCCAAGCCGAGTCAGCAACAAGCCCTCCC...TCCCACTGAGGGACAGCTAGACTCCTCCTCACCCTTTAGCAGGTCCCTTTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | TTTAGATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAGCAGGTCAGTGCAAGCCTGCGTCCAGCCCGGTaGGCTCTGGGACGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRYPGNVSFLFFQQVSASLRPAR*ALGRRC Trigger: GCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAG...GCTTGCACTGACCTGCTGGAAGAAAAGGAAGGACACATTGCCTGGGTATCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGTAGGGACCCAGGCCAGGCCTGACGCACTTGGACTCAAGTCCCTACTCGCAAAGATTCCAATTTaGTGCAAGCTGCGTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSVGTQARPDALGLKSLLAKIPI*CKLRPA Trigger: GGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGC...GAGTAGGGACTTGAGTCCAAGTGCGTCAGGCCTGGCCTGGGTCCCTACACTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCTGTTTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATGCATTCCCAGAGCCCGGGCTaGCCACTACGGCCAGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLFLCNAAPGLSSCMHSQSPG*PLRPVD Trigger: ATCTACTGGCCGTAGTGGCCAGCCCGGGCTCTGGGA...ATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAAACAGGAGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATGCATCCTTTTGGTCTCTGACAGTCGCCATCGCTaGGCCCGCTCCGAATCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FSVMLLQDCPPVCILLVSDSRHR*ARSESA Trigger: CGCCGATTCGGAGCGGGCGCAGCGATGGCGACTGTC...AGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGTAGGGACCCAGGCCAGGCCTGACGCACTTGGACTCAAGTCCCTACTCCAGTTCTGGCATTCCTaGTGGGTCACACTGAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSVGTQARPDALGLKSLLQFWHS*WVTLKY Trigger: ATACTTCAGTGTGACCCAGCAGGAATGCCAGAACTG...GAGTAGGGACTTGAGTCCAAGTGCGTCAGGCCTGGCCTGGGTCCCTACACTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | AGGGAGTTGGGTCGATGGGGACAGTCAAATGACTGTGAGGTGGAGTGTGGTGCCGAGTGGTGGAATTGCTaGTGGTGGGTTTTAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RELGRWGQSNDCEVECGAEWWNC*WWVLGG Trigger: GCCCCCTAAAACCCACCACCAGCAATTCCACCACTC...GGCACCACACTCCACCTCACAGTCATTTGACTGTCCCCATCGACCCAACTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR TCA 90 bp | GTAGAAAATGGCATAAGAAAGCCGCCCAGCTCTGCTGCCTGTGACGGAGGGCAGGGGGCTCAGAGTCCTTaGACTTCTTCTTCTCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: VENGIRKPPSSAACDGGQGAQSP*TSSSPT Trigger: AGTCGGAGAAGAAGAAGTTCAAGGACTCTGAGCCCC...CTGCCCTCCGTCACAGGCAGCAGAGCTGGGCGGCTTTCTTATGCCATTTTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | CTTCCCCTCCCCTCCTGTTTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTACCTTGTAGACAGCCTTaGAGCCTTTCGTGCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSCFSVMLLQDCPPVPCRQP*SLSCRT Trigger: GGTCCTGCACGAAAGGCTGCAAGGCTGTCTACAAGG...TACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAAACAGGAGGGGAGGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CAA 72 bp | CCAAGGGTCCATTCCCTGGGACCATATTGTCCCCCTTaGCTTCCCAGTCCTTTATCCCCTCCTGAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRVHSLGPYCPP*LPSPLSPPEDA Trigger: TGCATCCTCAGGAGGGGATAAAGGACTGGGAAGCAAAGGGGGACAATATGGTCCCAGGGAATGGACCCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CAA 72 bp | ATGGGAGTCTCCAAGGGTCCATTCCCTGGGACCATATaGTCCCCCTTTGCTTCCCAGTCCTTTATCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MGVSKGPFPGTI*SPFASQSFIPS Trigger: GGAGGGGATAAAGGACTGGGAAGCAAAGGGGGACAATATGGTCCCAGGGAATGGACCCTTGGAGACTCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATGCATCCTTTTGGTCTCTCAGCGAGCAGCACGGTaGAGAAGAGCAGGGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVMLLQDCPPVCILLVSQRAAR*RRAGTP Trigger: TGGCGTCCCTGCTCTTCTTCACCGTGCTGCTCGCTG...AGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAGGGACCTGCTAAAGGGTGAGGAGGAGTCTAGCTGTCCCTCAGTGGGACCTGCTGGGTCACACTaGAGTATTCTGAACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RERDLLKGEEESSCPSVGPAGSH*SILNTA Trigger: GGCTGTGTTCAGAATACTTCAGTGTGACCCAGCAGG...TCCCACTGAGGGACAGCTAGACTCCTCCTCACCCTTTAGCAGGTCCCTTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATGCATCCTTTTGGTCTCTCGGCTTTGGTCAGGTTaGTGTATCGCGGGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSVMLLQDCPPVCILLVSRLWSG*CIAGRR Trigger: CCTGCGGCCCGCGATACAGCAACCTGACCAAAGCCG...AGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | GTAGAAAATGGCATAAGAAAGCCGCCCAGCTCTGCTGCCTGTGACGGAGGGCAGTCACAGGAGACCCACTaGACATCACAGCACTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VENGIRKPPSSAACDGGQSQETH*TSQHLV Trigger: AACCAAGTGCTGTGATGTGCAGTGGGTCTCCTGTGA...CTGCCCTCCGTCACAGGCAGCAGAGCTGGGCGGCTTTCTTATGCCATTTTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | GATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAGCAGGTCAGTGCAAGCAAGGCAGGGCACCCAGTTCTaGCATTCCTGCTGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: DTQAMCPSFSSSRSVQARQGTQF*HSCWVT Trigger: TGTGACCCAGCAGGAATGCCAGAACTGGGTGCCCTG...CCTTGCTTGCACTGACCTGCTGGAAGAAAAGGAAGGACACATTGCCTGGGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CAA 72 bp | ACGCACTTGGACTCAAGTCCCTACTCCCTGTGGAGATaGGAAATGAAAGGTCTGTGGCCCCAAGGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: THLDSSPYSLWR*EMKGLWPQGQD Trigger: ATCTTGGCCTTGGGGCCACAGACCTTTCATTTCCAATCTCCACAGGGAGTAGGGACTTGAGTCCAAGTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CAA 72 bp | GTTAGCAGCAGCACTTTATCTCCAGTCAGAGTCCTCTaGCCAGCCTCTGAACTTTGTCCAGCAAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSSTLSPVRVL*PASELCPARAR Trigger: CCTTGCCCTTGCTGGACAAAGTTCAGAGGCTGGCAAGAGGACTCTGACTGGAGATAAAGTGCTGCTGCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCCCTCCCCTCCTGTTTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTACACACTGAAGTATTCTaGACACAGCCAGGCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSCFSVMLLQDCPPVHTEVF*TQPGLV Trigger: TACAAGGCCTGGCTGTGTTCAGAATACTTCAGTGTG...TACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAAACAGGAGGGGAGGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | GGGTTAAACAAGAGCAGAGATGTCTCTGCCCCACAGTGCAACAAAATAGAAAGCCTGCAGGGGCGGCTTTaGTCAGGTTGCTGTATCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLNKSRDVSAPQCNKIESLQGRL*SGCCIA Trigger: CGCGATACAGCAACCTGACCAAAGCCGCCCCTGCAG...GCTTTCTATTTTGTTGCACTGTGGGGCAGAGACATCTCTGCTCTTGTTTAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR TCA 90 bp | GATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAGCAGGTCAGTGCAAGCAAGGCGCAAAAGGAGAGAGTaGAGTTCCGAAAGTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTQAMCPSFSSSRSVQARRKRRE*SSESGL Trigger: AAGGCCACTTTCGGAACTTCACTCTCTCCTTTTGCG...CCTTGCTTGCACTGACCTGCTGGAAGAAAAGGAAGGACACATTGCCTGGGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | AACAAAATAGAAAGCAGTACACGTACAGACACTCTCACTGAAACACGGAGGCTGCAAGGTTTGTCGCTCTaGCTGGGAGCCCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKIESSTRTDTLTETRRLQGLSL*LGAQQQ Trigger: CTGCTGCTGGGCTCCCAGGCAGAGCGACAAACCTTG...CAGCCTCCGTGTTTCAGTGAGAGTGTCTGTACGTGTACTGCTTTCTATTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGCACTTTATCTCCAGTCAGAGTCCTCTTGCCAGCCTCTGAACTTTGTAAGATTCCAATTTGGTaGAAGCTGCGTCCAGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSTLSPVRVLLPASELCKIPIW*KLRPAR Trigger: CCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTT...ACAAAGTTCAGAGGCTGGCAAGAGGACTCTGACTGGAGATAAAGTGCTGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | AACAAAATAGAAAGCAGTACACGTACAGACACTCTCACTGAAACACGGAGGCTGTGTCGGGGCGGTCCATaGCAAGCAGCAAGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKIESSTRTDTLTETRRLCRGGP*QAASPR Trigger: TCTGGGACTTGCTGCTTGGCATGGACCGCCCCGACA...CAGCCTCCGTGTTTCAGTGAGAGTGTCTGTACGTGTACTGCTTTCTATTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | GCCCCTGCCTTTCACTTACACAGAAGCACATCTGGGAAGGATCCAGCACCTCGTGCCTGTAAGTATTTATaGAGCACGAGGTCGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: APAFHLHRSTSGKDPAPRACKYL*STRSNS Trigger: TGAGTTCGACCTCGTGCTGCATAAATACTTACAGGC...ACGAGGTGCTGGATCCTTCCCAGATGTGCTTCTGTGTAAGTGAAAGGCAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR GCA 90 bp | TTTAGATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAGCAGGTCAGTGCAAGCACCTCCAGGCAGTATTaGTTGCAGGGCACCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRYPGNVSFLFFQQVSASTSRQY*LQGTQF Trigger: GAACTGGGTGCCCTGCAAGCAATACTGCCTGGAGGT...GCTTGCACTGACCTGCTGGAAGAAAAGGAAGGACACATTGCCTGGGTATCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | AGAGAAAGGGACCTGCTAAAGGGTGAGGAGGAGTCTAGCTGTCCCTCAGTGGGATTCTGGCATTCCTGCTaGGTCACACTGAAGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RERDLLKGEEESSCPSVGFWHSC*VTLKYS Trigger: AGAATACTTCAGTGTGACCCAGCAGGAATGCCAGAA...TCCCACTGAGGGACAGCTAGACTCCTCCTCACCCTTTAGCAGGTCCCTTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CAA 72 bp | ATGCTGCTCCAGGACTGTCCTCCTGTATGCATCCTTTaGGTCTCTGAAAGCCATTGGCCTATCCCACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MLLQDCPPVCIL*VSESHWPIPQR Trigger: TCTTTGTGGGATAGGCCAATGGCTTTCAGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR TCA 90 bp | GGGTTAAACAAGAGCAGAGATGTCTCTGCCCCACAGTGCAACAAAATAGAAAGCTTCCGGCCGCTTTGGTaGAGTATCCATCAACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLNKSRDVSAPQCNKIESFRPLW*SIHQPC Trigger: ACAGGGTTGATGGATACTTCACCAAAGCGGCCGGAA...GCTTTCTATTTTGTTGCACTGTGGGGCAGAGACATCTCTGCTCTTGTTTAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CCA 90 bp | AACAAAATAGAAAGCAGTACACGTACAGACACTCTCACTGAAACACGGAGGCTGGCACATCACAGCACTTaGTTTCCGGCCGCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKIESSTRTDTLTETRRLAHHST*FPAALV Trigger: CACCAAAGCGGCCGGAAACCAAGTGCTGTGATGTGC...CAGCCTCCGTGTTTCAGTGAGAGTGTCTGTACGTGTACTGCTTTCTATTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR TCA 90 bp | TTTAGATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAGCAGGTCAGTGCAAGCTCATCATATTTTTCCTaGGCATGTCGATCCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FRYPGNVSFLFFQQVSASSSYFS*ACRSSR Trigger: GCGACTGGATCGACATGCTCAGGAAAAATATGATGA...GCTTGCACTGACCTGCTGGAAGAAAAGGAAGGACACATTGCCTGGGTATCTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| 3UTR CAA 72 bp | CACAAAGAATCGGGCTCCTGTTCTTGTCAGCTTGCATaGGCTTTTAGATACCCAGGCAATGTGTCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKESGSCSCQLA*AFRYPGNVSFL Trigger: AAGGAAGGACACATTGCCTGGGTATCTAAAAGCCAATGCAAGCTGACAAGAACAGGAGCCCGATTCTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS CCA 90 bp | GGACGCCGTTGCAGACCGGCCCGGAGCCGGCTGCAGGGGCGGCTTTaGTCAGGTTGCTGTATCGCGGGCCGCAGGTGCCCGAGGACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRCRPARSRLQGRL*SGCCIAGRRCPRTR Trigger: GCGCGTCCTCGGGCACCTGCGGCCCGCGATACAGCAACCTGACCAAAGCCGCCCCTGCAGCCGGCTCCGGGCCGGTCTGCAACGGCGTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS GCA 90 bp | CCCGGTGGGCTCTGGGACGCCGTTGCAGACCGGCCCGGAGCCGGCTaGAGGGGCGGCTTTGGTCAGGTTGCTGTATCGCGGGCCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGGLWDAVADRPGAG*RGGFGQVAVSRAAG Trigger: ACCTGCGGCCCGCGATACAGCAACCTGACCAAAGCCGCCCCTGCAGCCGGCTCCGGGCCGGTCTGCAACGGCGTCCCAGAGCCCACCGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS CCA 90 bp | CTCAGCTCCCTGGCCCGGGGCCGGGCCCCCGCGCACAGCCACAGATaGTCAGCGAGCAGCACGGTGAAGAAGAGCAGGGACGCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSSLARGRAPAHSHR*SASSTVKKSRDARD Trigger: GTCCCTGGCGTCCCTGCTCTTCTTCACCGTGCTGCTCGCTGACCATCTGTGGCTGTGCGCGGGGGCCCGGCCCCGGGCCAGGGAGCTGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS CCA 90 bp | CAAAGATTCCAATTTGGTGCAAGCTGCGTCCAGCCCGGTGGGCTCTaGGACGCCGTTGCAGACCGGCCCGGAGCCGGCTGCAGGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRFQFGASCVQPGGL*DAVADRPGAGCRGG Trigger: GCCGCCCCTGCAGCCGGCTCCGGGCCGGTCTGCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS GCA 90 bp | CGCCATCGCTGCGCCCGCTCCGAATCGGCGCAAGGTTTGTCGCTCTaGCTGGGAGCCCAGCAGCAGCAGCAGCAGCAGATAGTCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RHRCARSESAQGLSL*LGAQQQQQQQIVSA Trigger: CGCGCTGACTATCTGCTGCTGCTGCTGCTGCTGGGCTCCCAGGCAGAGCGACAAACCTTGCGCCGATTCGGAGCGGGCGCAGCGATGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS GCA 90 bp | GGCTGGCCACTACGGCCAGTAGATCCCCCAGCAGGGTGTCCAAACTaGAGTCCAGGCTGTCGGGGCGGTCCATGCCAAGCAGCAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GWPLRPVDPPAGCPN*SPGCRGGPCQAASP Trigger: GGGACTTGCTGCTTGGCATGGACCGCCCCGACAGCCTGGACTGCAGTTTGGACACCCTGCTGGGGGATCTACTGGCCGTAGTGGCCAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS CCA 90 bp | GTCTCTGCAAAGATTCCAATTTGGTGCAAGCTGCGTCCAGCCCGGTaGGCTCTGGGACGCCGTTGCAGACCGGCCCGGAGCCGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSAKIPIWCKLRPAR*ALGRRCRPARSRLQ Trigger: CTGCAGCCGGCTCCGGGCCGGTCTGCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCAGAGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CAA 90 bp | AGGGAGTTGGGTCGATGGGGACAGTCAAATGACTGTGAGGTGGAGTGTGGTGCCGGCTCTGGGACGCCGTaGCAGACCGGCCCGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RELGRWGQSNDCEVECGAGSGTP*QTGPEP Trigger: CGGCTCCGGGCCGGTCTGCAACGGCGTCCCAGAGCC...GGCACCACACTCCACCTCACAGTCATTTGACTGTCCCCATCGACCCAACTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CAA 90 bp | CCGCCCCACACTCAGGGTGCTGACAACGCTGGCAGGAGGGCAACCACACTGTCTGGCAGCAGGGAGGGCTaGTTGCTGACTCGGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPHTQGADNAGRRATTLSGSREG*LLTRLG Trigger: CCCAAGCCGAGTCAGCAACAAGCCCTCCCTGCTGCC...AGACAGTGTGGTTGCCCTCCTGCCAGCGTTGTCAGCACCCTGAGTGTGGGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CAA 90 bp | CCGCCCCACACTCAGGGTGCTGACAACGCTGGCAGGAGGGCAACCACACTGTCTGAATCGGCGCAAGGTTaGTCGCTCTGCCTGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPHTQGADNAGRRATTLSESAQG*SLCLGA Trigger: GGCTCCCAGGCAGAGCGACAAACCTTGCGCCGATTC...AGACAGTGTGGTTGCCCTCCTGCCAGCGTTGTCAGCACCCTGAGTGTGGGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CAA 90 bp | GTCACACTGTGTGCCTCATCCTGTGCCCGCCCCACACTCAGGGTGCTGACAACGGCGGCTTTGGTCAGGTaGCTGTATCGCGGGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VTLCASSCARPTLRVLTTAALVR*LYRGPQ Trigger: CTGCGGCCCGCGATACAGCAACCTGACCAAAGCCGC...CGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGATGAGGCACACAGTGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS CCA 90 bp | CCTCTATGCAATTGCTACATGCCTCCCAGGTCCCAGAGCCCGGGCTaGCCACTACGGCCAGTAGATCCCCCAGCAGGGTGTCCAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLCNCYMPPRSQSPG*PLRPVDPPAGCPNC Trigger: GCAGTTTGGACACCCTGCTGGGGGATCTACTGGCCGTAGTGGCCAGCCCGGGCTCTGGGACCTGGGAGGCATGTAGCAATTGCATAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS GCA 90 bp | GGTCGGTTCGAAAAGTCTCTGCAAAGATTCCAATTTGGTGCAAGCTaGGTCCAGCCCGGTGGGCTCTGGGACGCCGTTGCAGACCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRFEKSLQRFQFGAS*VQPGGLWDAVADRP Trigger: GGGCCGGTCTGCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCAGAGACTTTTCGAACCGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS CCA 90 bp | GAGCCGGGGTGGTCGGTTCGAAAAGTCTCTGCAAAGATTCCAATTTaGTGCAAGCTGCGTCCAGCCCGGTGGGCTCTGGGACGCCGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EPGWSVRKVSAKIPI*CKLRPARWALGRRC Trigger: GCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCAGAGACTTTTCGAACCGACCACCCCGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS GCA 90 bp | CCGGGGTGGTCGGTTCGAAAAGTCTCTGCAAAGATTCCAATTTGGTaGAAGCTGCGTCCAGCCCGGTGGGCTCTGGGACGCCGTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGWSVRKVSAKIPIW*KLRPARWALGRRCR Trigger: TCTGCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCAGAGACTTTTCGAACCGACCACCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS GCA 90 bp | CCAGCAGGGTGTCCAAACTGCAGTCCAGGCTGTCGGGGCGGTCCATaGCAAGCAGCAAGTCCCAGACTGTGTAGGTGTCGCAAAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PAGCPNCSPGCRGGP*QAASPRLCRCRKRR Trigger: TCTCCTTTTGCGACACCTACACAGTCTGGGACTTGCTGCTTGGCATGGACCGCCCCGACAGCCTGGACTGCAGTTTGGACACCCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS GCA 90 bp | TCAGGGAGGATAAAGGGGCACCGGGTCTGCACCTCCAGGCAGTATTaGTTGCAGGGCACCCAGTTCTGGCATTCCTGCTGGGTCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SGRIKGHRVCTSRQY*LQGTQFWHSCWVTL Trigger: CAGTGTGACCCAGCAGGAATGCCAGAACTGGGTGCCCTGCAAGCAATACTGCCTGGAGGTGCAGACCCGGTGCCCCTTTATCCTCCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CAA 90 bp | TTGGGCTGGTCTGAGCCAGGGGTCTCCTGGGCACTTGGTGAGGGGGAAGAGAGGTGCAAAGATTCCAATTaGGTGCAAGCTGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGWSEPGVSWALGEGEERCKDSN*VQAASS Trigger: GCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCA...CCTCTCTTCCCCCTCACCAAGTGCCCAGGAGACCCCTGGCTCAGACCAGCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CAA 90 bp | GTCACACTGTGTGCCTCATCCTGTGCCCGCCCCACACTCAGGGTGCTGACAACGTGGTTTCCGGCCGCTTaGGTGAAGTATCCATCAACC | + |
|
Preference number: 5 (lower is better) Translates to: VTLCASSCARPTLRVLTTWFPAA*VKYPST Trigger: GGTTGATGGATACTTCACCAAAGCGGCCGGAAACCA...CGTTGTCAGCACCCTGAGTGTGGGGCGGGCACAGGATGAGGCACACAGTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CAA 90 bp | GTAGAAAATGGCATAAGAAAGCCGCCCAGCTCTGCTGCCTGTGACGGAGGGCAGTCCAGGCAGTATTGCTaGCAGGGCACCCAGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VENGIRKPPSSAACDGGQSRQYC*QGTQFW Trigger: CCAGAACTGGGTGCCCTGCAAGCAATACTGCCTGGA...CTGCCCTCCGTCACAGGCAGCAGAGCTGGGCGGCTTTCTTATGCCATTTTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CAA 90 bp | GGTATCATTAGTGTAGCCATCTCTTCAGGCCACCTCTCCCCTTTCTTCTCCCCTGCTGCAGGGGCGGCTTaGGTCAGGTTGCTGTATCGC | + |
|
Preference number: 5 (lower is better) Translates to: GIISVAISSGHLSPFFSPAAGAA*VRLLYR Trigger: GCGATACAGCAACCTGACCAAAGCCGCCCCTGCAGC...AGGGGAGAAGAAAGGGGAGAGGTGGCCTGAAGAGATGGCTACACTAATGATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
||
| CDS-3UTR CAA 90 bp | AGGGAGTTGGGTCGATGGGGACAGTCAAATGACTGTGAGGTGGAGTGTGGTGCCGGGGGCTCAGAGTCCTaGAACTTCTTCTTCTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: RELGRWGQSNDCEVECGAGGSES*NFFFSD Trigger: GTCGGAGAAGAAGAAGTTCAAGGACTCTGAGCCCCC...GGCACCACACTCCACCTCACAGTCATTTGACTGTCCCCATCGACCCAACTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS TCA 90 bp | GGGCACCCAGTTCTGGCATTCCTGCTGGGTCACACTGAAGTATTCTaGACACAGCCAGGCCTTGTAGACAGCCTTGCAGCCTTTCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: GHPVLAFLLGHTEVF*TQPGLVDSLAAFRA Trigger: TGCACGAAAGGCTGCAAGGCTGTCTACAAGGCCTGGCTGTGTTCAGAATACTTCAGTGTGACCCAGCAGGAATGCCAGAACTGGGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS TCA 90 bp | ATTGCTTGCAGGGCACCCAGTTCTGGCATTCCTGCTGGGTCACACTaGAGTATTCTGAACACAGCCAGGCCTTGTAGACAGCCTTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: IACRAPSSGIPAGSH*SILNTARPCRQPCS Trigger: GCTGCAAGGCTGTCTACAAGGCCTGGCTGTGTTCAGAATACTTCAGTGTGACCCAGCAGGAATGCCAGAACTGGGTGCCCTGCAAGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAATGCTGCTCCAGGACTGTCCTCCTGTATGCATCCTTTTGGTCTCTAGCAGGGAGGGCTTGTaGCTGACTCGGCTTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: FSVMLLQDCPPVCILLVSSREGL*LTRLGG Trigger: ACCCCCAAGCCGAGTCAGCAACAAGCCCTCCCTGCT...AGAGACCAAAAGGATGCATACAGGAGGACAGTCCTGGAGCAGCATTACAGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 90 bp | GAACTCATCATATTTTTCCTGAGCATGTCGATCCAGTCGCTGGTATaGCTCTATGCAATTGCTACATGCCTCCCAGGTCCCAGAGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: ELIIFFLSMSIQSLV*LYAIATCLPGPRAR Trigger: CCGGGCTCTGGGACCTGGGAGGCATGTAGCAATTGCATAGAGGCATACCAGCGACTGGATCGACATGCTCAGGAAAAATATGATGAGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 90 bp | TCAGAGTCCTTGAACTTCTTCTTCTCCGACTCACAGGAGACCCACTaGACATCACAGCACTTGGTTTCCGGCCGCTTTGGTGAAGTATCC | + |
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Preference number: 5 (lower is better) Translates to: SESLNFFFSDSQETH*TSQHLVSGRFGEVS Trigger: GGATACTTCACCAAAGCGGCCGGAAACCAAGTGCTGTGATGTGCAGTGGGTCTCCTGTGAGTCGGAGAAGAAGAAGTTCAAGGACTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CCA 90 bp | TCTTCTTCTCCGACTCACAGGAGACCCACTGCACATCACAGCACTTaGTTTCCGGCCGCTTTGGTGAAGTATCCATCAACCCTGTACAGA | + |
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Preference number: 5 (lower is better) Translates to: SSSPTHRRPTAHHST*FPAALVKYPSTLYR Trigger: TCTGTACAGGGTTGATGGATACTTCACCAAAGCGGCCGGAAACCAAGTGCTGTGATGTGCAGTGGGTCTCCTGTGAGTCGGAGAAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS-3UTR CAA 90 bp | GATACCCAGGCAATGTGTCCTTCCTTTTCTTCCAGCAGGTCAGTGCAAGCAAGGATAGGAGTGGTGGAATaGCTGGTGGTGGGTTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: DTQAMCPSFSSSRSVQARIGVVE*LVVGFR Trigger: CCTAAAACCCACCACCAGCAATTCCACCACTCCTAT...CCTTGCTTGCACTGACCTGCTGGAAGAAAAGGAAGGACACATTGCCTGGGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS-3UTR CAA 90 bp | AACAAAATAGAAAGCAGTACACGTACAGACACTCTCACTGAAACACGGAGGCTGCACCTCCAGGCAGTATaGCTTGCAGGGCACCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: NKIESSTRTDTLTETRRLHLQAV*LAGHPV Trigger: AACTGGGTGCCCTGCAAGCAATACTGCCTGGAGGTG...CAGCCTCCGTGTTTCAGTGAGAGTGTCTGTACGTGTACTGCTTTCTATTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS TCA 90 bp | TGTAAGTATTTATGCAGCACGAGGTCGAACTCATCATATTTTTCCTaGGCATGTCGATCCAGTCGCTGGTATGCCTCTATGCAATTGCTA | + |
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Preference number: 5 (lower is better) Translates to: CKYLCSTRSNSSYFS*ACRSSRWYASMQLL Trigger: TAGCAATTGCATAGAGGCATACCAGCGACTGGATCGACATGCTCAGGAAAAATATGATGAGTTCGACCTCGTGCTGCATAAATACTTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 72 bp | CAAGCTGCGTCCAGCCCGGTGGGCTCTGGGACGCCGTaGCAGACCGGCCCGGAGCCGGCTGCAGGGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: QAASSPVGSGTP*QTGPEPAAGAA Trigger: AGCCGCCCCTGCAGCCGGCTCCGGGCCGGTCTGCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | GCCCGGAGCCGGCTGCAGGGGCGGCTTTGGTCAGGTTaGTGTATCGCGGGCCGCAGGTGCCCGAGGACGCGC | + |
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Preference number: 6 (lower is better) Translates to: ARSRLQGRLWSG*CIAGRRCPRTR Trigger: GCGCGTCCTCGGGCACCTGCGGCCCGCGATACAGCAACCTGACCAAAGCCGCCCCTGCAGCCGGCTCCGGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | AAGCTGCGTCCAGCCCGGTGGGCTCTGGGACGCCGTTaGAGACCGGCCCGGAGCCGGCTGCAGGGGCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: KLRPARWALGRR*RPARSRLQGRL Trigger: AAGCCGCCCCTGCAGCCGGCTCCGGGCCGGTCTGCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 72 bp | GGCCCGGAGCCGGCTGCAGGGGCGGCTTTGGTCAGGTaGCTGTATCGCGGGCCGCAGGTGCCCGAGGACGCG | + |
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Preference number: 6 (lower is better) Translates to: GPEPAAGAALVR*LYRGPQVPEDA Trigger: CGCGTCCTCGGGCACCTGCGGCCCGCGATACAGCAACCTGACCAAAGCCGCCCCTGCAGCCGGCTCCGGGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 90 bp | GGGACGCCGTTGCAGACCGGCCCGGAGCCGGCTGCAGGGGCGGCTTaGGTCAGGTTGCTGTATCGCGGGCCGCAGGTGCCCGAGGACGCG | + |
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Preference number: 6 (lower is better) Translates to: GTPLQTGPEPAAGAA*VRLLYRGPQVPEDA Trigger: CGCGTCCTCGGGCACCTGCGGCCCGCGATACAGCAACCTGACCAAAGCCGCCCCTGCAGCCGGCTCCGGGCCGGTCTGCAACGGCGTCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | CGGCTTTGGTCAGGTTGCTGTATCGCGGGCCGCAGGTaGCCGAGGACGCGCTGGGCTCGCCAGGCGACGGCG | + |
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Preference number: 6 (lower is better) Translates to: RLWSGCCIAGRR*PRTRWARQATA Trigger: CGCCGTCGCCTGGCGAGCCCAGCGCGTCCTCGGGCACCTGCGGCCCGCGATACAGCAACCTGACCAAAGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CCA 72 bp | TGCAGACCGGCCCGGAGCCGGCTGCAGGGGCGGCTTTaGTCAGGTTGCTGTATCGCGGGCCGCAGGTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: CRPARSRLQGRL*SGCCIAGRRCP Trigger: CGGGCACCTGCGGCCCGCGATACAGCAACCTGACCAAAGCCGCCCCTGCAGCCGGCTCCGGGCCGGTCTGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CCA 72 bp | CTGGCCCGGGGCCGGGCCCCCGCGCACAGCCACAGATaGTCAGCGAGCAGCACGGTGAAGAAGAGCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LARGRAPAHSHR*SASSTVKKSRD Trigger: GTCCCTGCTCTTCTTCACCGTGCTGCTCGCTGACCATCTGTGGCTGTGCGCGGGGGCCCGGCCCCGGGCCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 72 bp | TTGCAGACCGGCCCGGAGCCGGCTGCAGGGGCGGCTTaGGTCAGGTTGCTGTATCGCGGGCCGCAGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LQTGPEPAAGAA*VRLLYRGPQVP Trigger: GGGCACCTGCGGCCCGCGATACAGCAACCTGACCAAAGCCGCCCCTGCAGCCGGCTCCGGGCCGGTCTGCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | CTCTGGGACGCCGTTGCAGACCGGCCCGGAGCCGGCTaGAGGGGCGGCTTTGGTCAGGTTGCTGTATCGCGG | + |
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Preference number: 6 (lower is better) Translates to: LWDAVADRPGAG*RGGFGQVAVSR Trigger: CCGCGATACAGCAACCTGACCAAAGCCGCCCCTGCAGCCGGCTCCGGGCCGGTCTGCAACGGCGTCCCAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CCA 72 bp | CAATTTGGTGCAAGCTGCGTCCAGCCCGGTGGGCTCTaGGACGCCGTTGCAGACCGGCCCGGAGCCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QFGASCVQPGGL*DAVADRPGAGC Trigger: GCAGCCGGCTCCGGGCCGGTCTGCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 72 bp | CGCCATCGCTGCGCCCGCTCCGAATCGGCGCAAGGTTaGTCGCTCTGCCTGGGAGCCCAGCAGCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RHRCARSESAQG*SLCLGAQQQQQ Trigger: CTGCTGCTGCTGCTGGGCTCCCAGGCAGAGCGACAAACCTTGCGCCGATTCGGAGCGGGCGCAGCGATGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | TGCGCCCGCTCCGAATCGGCGCAAGGTTTGTCGCTCTaGCTGGGAGCCCAGCAGCAGCAGCAGCAGCAGATA | + |
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Preference number: 6 (lower is better) Translates to: CARSESAQGLSL*LGAQQQQQQQI Trigger: TATCTGCTGCTGCTGCTGCTGCTGGGCTCCCAGGCAGAGCGACAAACCTTGCGCCGATTCGGAGCGGGCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CCA 72 bp | AAGATTCCAATTTGGTGCAAGCTGCGTCCAGCCCGGTaGGCTCTGGGACGCCGTTGCAGACCGGCCCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: KIPIWCKLRPAR*ALGRRCRPARS Trigger: GCTCCGGGCCGGTCTGCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | CTACGGCCAGTAGATCCCCCAGCAGGGTGTCCAAACTaGAGTCCAGGCTGTCGGGGCGGTCCATGCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LRPVDPPAGCPN*SPGCRGGPCQA Trigger: TGCTTGGCATGGACCGCCCCGACAGCCTGGACTGCAGTTTGGACACCCTGCTGGGGGATCTACTGGCCGTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 90 bp | GGAGCCGGGGTGGTCGGTTCGAAAAGTCTCTGCAAAGATTCCAATTaGGTGCAAGCTGCGTCCAGCCCGGTGGGCTCTGGGACGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: GAGVVGSKSLCKDSN*VQAASSPVGSGTPL Trigger: CAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCAGAGACTTTTCGAACCGACCACCCCGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | TGTCCAAACTGCAGTCCAGGCTGTCGGGGCGGTCCATaGCAAGCAGCAAGTCCCAGACTGTGTAGGTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: CPNCSPGCRGGP*QAASPRLCRCR Trigger: GCGACACCTACACAGTCTGGGACTTGCTGCTTGGCATGGACCGCCCCGACAGCCTGGACTGCAGTTTGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 90 bp | GGGAGGATAAAGGGGCACCGGGTCTGCACCTCCAGGCAGTATTGCTaGCAGGGCACCCAGTTCTGGCATTCCTGCTGGGTCACACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: GRIKGHRVCTSRQYC*QGTQFWHSCWVTLK Trigger: CTTCAGTGTGACCCAGCAGGAATGCCAGAACTGGGTGCCCTGCAAGCAATACTGCCTGGAGGTGCAGACCCGGTGCCCCTTTATCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 90 bp | GTCAGGGAGGATAAAGGGGCACCGGGTCTGCACCTCCAGGCAGTATaGCTTGCAGGGCACCCAGTTCTGGCATTCCTGCTGGGTCACACT | + |
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Preference number: 6 (lower is better) Translates to: VREDKGAPGLHLQAV*LAGHPVLAFLLGHT Trigger: AGTGTGACCCAGCAGGAATGCCAGAACTGGGTGCCCTGCAAGCAATACTGCCTGGAGGTGCAGACCCGGTGCCCCTTTATCCTCCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | ATCCAGTCGCTGGTATGCCTCTATGCAATTGCTACATaGCTCCCAGGTCCCAGAGCCCGGGCTGGCCACTAC | + |
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Preference number: 6 (lower is better) Translates to: IQSLVCLYAIAT*LPGPRARAGHY Trigger: GTAGTGGCCAGCCCGGGCTCTGGGACCTGGGAGGCATGTAGCAATTGCATAGAGGCATACCAGCGACTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | ATAAAGGGGCACCGGGTCTGCACCTCCAGGCAGTATTaGTTGCAGGGCACCCAGTTCTGGCATTCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: IKGHRVCTSRQY*LQGTQFWHSCW Trigger: CCAGCAGGAATGCCAGAACTGGGTGCCCTGCAAGCAATACTGCCTGGAGGTGCAGACCCGGTGCCCCTTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | CCTGAGCATGTCGATCCAGTCGCTGGTATGCCTCTATaGAATTGCTACATGCCTCCCAGGTCCCAGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PEHVDPVAGMPL*NCYMPPRSQSP Trigger: CGGGCTCTGGGACCTGGGAGGCATGTAGCAATTGCATAGAGGCATACCAGCGACTGGATCGACATGCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | GAAAAGTCTCTGCAAAGATTCCAATTTGGTGCAAGCTaGGTCCAGCCCGGTGGGCTCTGGGACGCCGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: EKSLQRFQFGAS*VQPGGLWDAVA Trigger: TGCAACGGCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCAGAGACTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | TCGGTTCGAAAAGTCTCTGCAAAGATTCCAATTTGGTaGAAGCTGCGTCCAGCCCGGTGGGCTCTGGGACGC | + |
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Preference number: 6 (lower is better) Translates to: SVRKVSAKIPIW*KLRPARWALGR Trigger: GCGTCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCAGAGACTTTTCGAACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 72 bp | GTGGTCGGTTCGAAAAGTCTCTGCAAAGATTCCAATTaGGTGCAAGCTGCGTCCAGCCCGGTGGGCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VVGSKSLCKDSN*VQAASSPVGSG Trigger: CCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCAGAGACTTTTCGAACCGACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CCA 72 bp | TGGTCGGTTCGAAAAGTCTCTGCAAAGATTCCAATTTaGTGCAAGCTGCGTCCAGCCCGGTGGGCTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: WSVRKVSAKIPI*CKLRPARWALG Trigger: TCCCAGAGCCCACCGGGCTGGACGCAGCTTGCACCAAATTGGAATCTTTGCAGAGACTTTTCGAACCGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS TCA 72 bp | AGGGCACCCAGTTCTGGCATTCCTGCTGGGTCACACTaGAGTATTCTGAACACAGCCAGGCCTTGTAGACAG | + |
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Preference number: 6 (lower is better) Translates to: RAPSSGIPAGSH*SILNTARPCRQ Trigger: CTGTCTACAAGGCCTGGCTGTGTTCAGAATACTTCAGTGTGACCCAGCAGGAATGCCAGAACTGGGTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 72 bp | ATAAAGCCAGGGAGGCCTCCATACACCATTTCTTCATaGTCAGGGAGGATAAAGGGGCACCGGGTCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: IKPGRPPYTISS*SGRIKGHRVCT Trigger: GGTGCAGACCCGGTGCCCCTTTATCCTCCCTGACAATGAAGAAATGGTGTATGGAGGCCTCCCTGGCTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 90 bp | GAGTGGTGGAATTGCTGGTGGTGGGTTTTAGGGGGCTCAGAGTCCTaGAACTTCTTCTTCTCCGACTCACAGGAGACCCACTGCACATCA | + |
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Preference number: 6 (lower is better) Translates to: EWWNCWWWVLGGSES*NFFFSDSQETHCTS Trigger: TGATGTGCAGTGGGTCTCCTGTGAGTCGGAGAAGAAGAAGTTCAAGGACTCTGAGCCCCCTAAAACCCACCACCAGCAATTCCACCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | CAGTATTGCTTGCAGGGCACCCAGTTCTGGCATTCCTaGTGGGTCACACTGAAGTATTCTGAACACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: QYCLQGTQFWHS*WVTLKYSEHSQ Trigger: CTGGCTGTGTTCAGAATACTTCAGTGTGACCCAGCAGGAATGCCAGAACTGGGTGCCCTGCAAGCAATACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS CAA 90 bp | TTCTTCTTCTCCGACTCACAGGAGACCCACTGCACATCACAGCACTaGGTTTCCGGCCGCTTTGGTGAAGTATCCATCAACCCTGTACAG | + |
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Preference number: 6 (lower is better) Translates to: FFFSDSQETHCTSQH*VSGRFGEVSINPVQ Trigger: CTGTACAGGGTTGATGGATACTTCACCAAAGCGGCCGGAAACCAAGTGCTGTGATGTGCAGTGGGTCTCCTGTGAGTCGGAGAAGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS TCA 72 bp | CTGCACATCACAGCACTTGGTTTCCGGCCGCTTTGGTaGAGTATCCATCAACCCTGTACAGATAAAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LHITALGFRPLW*SIHQPCTDKAR Trigger: CCTGGCTTTATCTGTACAGGGTTGATGGATACTTCACCAAAGCGGCCGGAAACCAAGTGCTGTGATGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS GCA 72 bp | ATATTTTTCCTGAGCATGTCGATCCAGTCGCTGGTATaGCTCTATGCAATTGCTACATGCCTCCCAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: IFFLSMSIQSLV*LYAIATCLPGP Trigger: GGGACCTGGGAGGCATGTAGCAATTGCATAGAGGCATACCAGCGACTGGATCGACATGCTCAGGAAAAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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| CDS TCA 72 bp | TTATGCAGCACGAGGTCGAACTCATCATATTTTTCCTaGGCATGTCGATCCAGTCGCTGGTATGCCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: LCSTRSNSSYFS*ACRSSRWYASM Trigger: CATAGAGGCATACCAGCGACTGGATCGACATGCTCAGGAAAAATATGATGAGTTCGACCTCGTGCTGCATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096363.3 |
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