Pregenerated sensors for TMEM273 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041707Ensembl transcript IDs: ENSMUST00000039191.8, ENSMUST00000227060.2, ENSMUST00000227871.2, ENSMUST00000228481.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCGCTCTCTGTGAGGCACTGTGCCAGCATGCTCTGGATCTCCTCCTaGCCAGGGGTGTCAGTGTCCTTCTCCTCACTTACCCCTAGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: SLSVRHCASMLWISS*PGVSVSFSSLTPRL Trigger: CAGCCTAGGGGTAAGTGAGGAGAAGGACACTGACACCCCTGGGCAGGAGGAGATCCAGAGCATGCTGGCACAGTGCCTCACAGAGAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR GCA 90 bp | GACCACACAACCACCTGCCTTCATGCAGACTGGGAAAGCAGAGTTTaGCAAGACAGGAATGATTCAATTGCAAGGGAACATTCCCAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: DHTTTCLHADWESRV*QDRNDSIAREHSQS Trigger: GCTCTGGGAATGTTCCCTTGCAATTGAATCATTCCTGTCTTGGCAAACTCTGCTTTCCCAGTCTGCATGAAGGCAGGTGGTTGTGTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR TCA 90 bp | CTGCCTTCATGCAGACTGGGAAAGCAGAGTTTGCCAAGACAGGAATaGTTCAATTGCAAGGGAACATTCCCAGAGCCTGATAACGAGACT | + |
|
Preference number: 1 (lower is better) Translates to: LPSCRLGKQSLPRQE*FNCKGTFPEPDNET Trigger: AGTCTCGTTATCAGGCTCTGGGAATGTTCCCTTGCAATTGAATCATTCCTGTCTTGGCAAACTCTGCTTTCCCAGTCTGCATGAAGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR TCA 90 bp | AACAGCGCTAAAAGAAACAAATCAATTACCAGCTCCAGTACACGATaGTTTATTCTATCTCACACACGGACGATTGCTTATGAGTACCAT | + |
|
Preference number: 1 (lower is better) Translates to: NSAKRNKSITSSSTR*FILSHTRTIAYEYH Trigger: ATGGTACTCATAAGCAATCGTCCGTGTGTGAGATAGAATAAATCATCGTGTACTGGAGCTGGTAATTGATTTGTTTCTTTTAGCGCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCTCCTCACTTACCCCTAGGCTGTCCTCTGTTCCCTCAGAAGGTCACTCTTGTTGTTGTAGAAGCCTaGCCAGCTCCTACATGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PSPHLPLGCPLFPQKVTLVVVEA*PAPTWA Trigger: TGCCCATGTAGGAGCTGGGCAGGCTTCTACAACAAC...AAGAGTGACCTTCTGAGGGAACAGAGGACAGCCTAGGGGTAAGTGAGGAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCACACACGGACGATTGCTTATGAGTACCATGTAACTGCTCCAGGTGATCAGTGCGGCACTTCGTTTTaGAAAATAGTTCCTCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SHTRTIAYEYHVTAPGDQCGTSF*KIVPLS Trigger: TGAAAGAGGAACTATTTTTCAAAACGAAGTGCCGCA...CTGATCACCTGGAGCAGTTACATGGTACTCATAAGCAATCGTCCGTGTGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTACATGGGCACCTAGGTTGAGAAATACAGATTCAGGGTTTCCTTTTGCCCTGAGTCCGTTTAGTACCTaGTCTTATATTGAGTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: PTWAPRLRNTDSGFPFALSPFST*SYIEFK Trigger: CTTGAACTCAATATAAGAGCAGGTACTAAACGGACT...CAGGGCAAAAGGAAACCCTGAATCTGTATTTCTCAACCTAGGTGCCCATGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 ENSMUST00000228481.2 |
||
| 3UTR CCA 72 bp | CTGTCGCTCTCTGTGAGGCACTGTGCCAGCATGCTCTaGATCTCCTCCTGCCCAGGGGTGTCAGTGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSLSVRHCASML*ISSCPGVSVSF Trigger: GAAGGACACTGACACCCCTGGGCAGGAGGAGATCCAGAGCATGCTGGCACAGTGCCTCACAGAGAGCGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR GCA 72 bp | GTGAGGCACTGTGCCAGCATGCTCTGGATCTCCTCCTaGCCAGGGGTGTCAGTGTCCTTCTCCTCACTTACC | + |
|
Preference number: 3 (lower is better) Translates to: VRHCASMLWISS*PGVSVSFSSLT Trigger: GGTAAGTGAGGAGAAGGACACTGACACCCCTGGGCAGGAGGAGATCCAGAGCATGCTGGCACAGTGCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCCTCCTGCCCAGGGGTGTCAGTGTCCTTCTCCTCACTTACCCCTAGGCTGATTCAGGGTTTCCTTTaGCCCTGCTGTCCATTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: ISSCPGVSVSFSSLTPRLIQGFL*PCCPFE Trigger: CTCGAATGGACAGCAGGGCAAAAGGAAACCCTGAAT...CAGCCTAGGGGTAAGTGAGGAGAAGGACACTGACACCCCTGGGCAGGAGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR TCA 72 bp | GCAATCAATGTGAGCCTGCATTCCTGTCGCTCTCTGTaGGGCACTGTGCCAGCATGCTCTGGATCTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: AINVSLHSCRSL*GTVPACSGSPP Trigger: AGGAGGAGATCCAGAGCATGCTGGCACAGTGCCTCACAGAGAGCGACAGGAATGCAGGCTCACATTGATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR CCA 72 bp | GGAGGAAGCTGTCTTGGCTTGGACTATGAGCCATGCTaGGGTGAGGTTTCATTGACGTGGACACAATGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GGSCLGLDYEPC*GEVSLTWTQCC Trigger: ACAACATTGTGTCCACGTCAATGAAACCTCACCCCAGCATGGCTCATAGTCCAAGCCAAGACAGCTTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| 3UTR TCA 72 bp | CCTGCCCAGCTCCTACATGGGCACCTGCTCTTATATTaGGTTCAAGTAATGATCCATCATTGGCCTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PAQLLHGHLLLY*VQVMIHHWPWM Trigger: CATCCAAGGCCAATGATGGATCATTACTTGAACTCAATATAAGAGCAGGTGCCCATGTAGGAGCTGGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227871.2 |
||
| 3UTR GCA 72 bp | GTTCCCTCAGAAGGTCACTCTTCTGTGGATAAGCATTaGACACTGACTCATCAATTCGATGCTCCCCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VPSEGHSSVDKH*TLTHQFDAPLD Trigger: ATCCAGGGGAGCATCGAATTGATGAGTCAGTGTGCAATGCTTATCCACAGAAGAGTGACCTTCTGAGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR TCA 72 bp | TGCAGACTGGGAAAGCAGAGTTTGCCAAGACAGGAATaGTTCAATTGCAAGGGAACATTCCCAGAGCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CRLGKQSLPRQE*FNCKGTFPEPD Trigger: ATCAGGCTCTGGGAATGTTCCCTTGCAATTGAATCATTCCTGTCTTGGCAAACTCTGCTTTCCCAGTCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR GCA 72 bp | ACCACCTGCCTTCATGCAGACTGGGAAAGCAGAGTTTaGCAAGACAGGAATGATTCAATTGCAAGGGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: TTCLHADWESRV*QDRNDSIAREH Trigger: ATGTTCCCTTGCAATTGAATCATTCCTGTCTTGGCAAACTCTGCTTTCCCAGTCTGCATGAAGGCAGGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| 3UTR CCA 72 bp | CACAATGTTGTTGTAGAAGCCTGCCCAGCTCCTACATaGGCACCTAGGTTGAGAAATACAGATTCAGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HNVVVEACPAPT*APRLRNTDSGF Trigger: AAACCCTGAATCTGTATTTCTCAACCTAGGTGCCCATGTAGGAGCTGGGCAGGCTTCTACAACAACATTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 ENSMUST00000228481.2 |
||
| 3UTR CCA 72 bp | CACAATGTTGTTGTAGAAGCCTGCCCAGCTCCTACATaGGCACCTGCTCTTATATTGAGTTCAAGTAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: HNVVVEACPAPT*APALILSSSND Trigger: ATCATTACTTGAACTCAATATAAGAGCAGGTGCCCATGTAGGAGCTGGGCAGGCTTCTACAACAACATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227871.2 |
||
| 3UTR TCA 72 bp | AAAAGAAACAAATCAATTACCAGCTCCAGTACACGATaGTTTATTCTATCTCACACACGGACGATTGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: KRNKSITSSSTR*FILSHTRTIAY Trigger: ATAAGCAATCGTCCGTGTGTGAGATAGAATAAATCATCGTGTACTGGAGCTGGTAATTGATTTGTTTCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| CDS-3UTR GCA 90 bp | GCAGATACTCTCCCAGAACAGGAGCGACCGCTTCCCTTGGGACACAGGGGCTGCCAGTCTCAGCAGGCTTaGCCGTTGCCAACACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ADTLPEQERPLPLGHRGCQSQQA*PLPTLE Trigger: CTCAAGTGTTGGCAACGGGCAAGCCTGCTGAGACTG...GCAGCCCCTGTGTCCCAAGGGAAGCGGTCGCTCCTGTTCTGGGAGAGTATCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| CDS-3UTR GCA 90 bp | TACTCTCCCAGAACAGGAGCGACCGCTTCCCTTGGGACACAGGGGCTGCCGATTCAGTCTCAGCAGGCTTaGCCGTTGCCAACACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSPRTGATASLGTQGLPIQSQQA*PLPTLE Trigger: CTCAAGTGTTGGCAACGGGCAAGCCTGCTGAGACTG...AATCGGCAGCCCCTGTGTCCCAAGGGAAGCGGTCGCTCCTGTTCTGGGAGAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| CDS-3UTR CCA 90 bp | CAGATACTCTCCCAGAACAGGAGCGACCGCTTCCCTTGGGACACAGGGGCTGCCCTCCCGGGCATCTCTTaGGCTTTTCTTCTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QILSQNRSDRFPWDTGAALPGIS*AFLLQQ Trigger: TTGCTGAAGAAGAAAAGCCCAAGAGATGCCCGGGAG...GGCAGCCCCTGTGTCCCAAGGGAAGCGGTCGCTCCTGTTCTGGGAGAGTATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| CDS-3UTR TCA 90 bp | ACCGCTTCCCTTGGGACACAGGGGCTGCCGATTGTAGTCCGTTTAGTACCTGCTCCCGTTGCCAACACTTaGGCTCCTCCAATGCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TASLGTQGLPIVVRLVPAPVANT*APPMPK Trigger: CTTAGGCATTGGAGGAGCTCAAGTGTTGGCAACGGG...AGCAGGTACTAAACGGACTACAATCGGCAGCCCCTGTGTCCCAAGGGAAGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| CDS-3UTR GCA 90 bp | ATACTCTCCCAGAACAGGAGCGACCGCTTCCCTTGGGACACAGGGGCTGCCGATCTTGAGCTCCTCCAATaGCTAAGAGGAAGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILSQNRSDRFPWDTGAADLELLQ*LRGRGG Trigger: TCCTCCTCTTCCTCTTAGGCATTGGAGGAGCTCAAG...ATCGGCAGCCCCTGTGTCCCAAGGGAAGCGGTCGCTCCTGTTCTGGGAGAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| CDS-3UTR GCA 90 bp | GATTCAGGGTTTCCTTTTGCCCTGCTGTCCATTCGAGCACTTCCCCTCGCAGATAGCAGGCTTGCCCGTTaGCAACACTTGAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSGFPFALLSIRALPLADSRLAR*QHLSSS Trigger: GGAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCT...ATCTGCGAGGGGAAGTGCTCGAATGGACAGCAGGGCAAAAGGAAACCCTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| CDS-3UTR GCA 90 bp | AGATTCAGGGTTTCCTTTTGCCCTGCTGTCCATTCGAGCACTTCCCCTCGCAGAAGCAGGCTTGCCCGTTaGCAACACTTGAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFRVSFCPAVHSSTSPRRSRLAR*QHLSSS Trigger: GGAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCT...TCTGCGAGGGGAAGTGCTCGAATGGACAGCAGGGCAAAAGGAAACCCTGAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| CDS-3UTR CCA 90 bp | GCGACCGCTTCCCTTGGGACACAGGGGCTGCCGATTGTAGTCCGTTTAGTACCTAGCAAGATGGTGTCCTaGGGTGTGTTCTTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATASLGTQGLPIVVRLVPSKMVS*GVFFRS Trigger: AGACCTGAAGAACACACCCCAGGACACCATCTTGCT...AGGTACTAAACGGACTACAATCGGCAGCCCCTGTGTCCCAAGGGAAGCGGTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| CDS-3UTR GCA 90 bp | ACCGCTTCCCTTGGGACACAGGGGCTGCCGATTGTAGTCCGTTTAGTACCTGCTCAAGGCAAGGAAACCTaGAGATATGGCTACTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TASLGTQGLPIVVRLVPAQGKET*RYGYSH Trigger: GTGGGAGTAGCCATATCTGCAGGTTTCCTTGCCTTG...AGCAGGTACTAAACGGACTACAATCGGCAGCCCCTGTGTCCCAAGGGAAGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCACAGTGCTGAGGAGGAAGCTGTCTTGGCTTGGACTATGAGCCATGCTAGCAAGATGGTGTCCTaGGGTGTGTTCTTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPHSAEEEAVLAWTMSHASKMVS*GVFFRS Trigger: AGACCTGAAGAACACACCCCAGGACACCATCTTGCT...AGCATGGCTCATAGTCCAAGCCAAGACAGCTTCCTCCTCAGCACTGTGGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS-3UTR CCA 90 bp | GCGACCGCTTCCCTTGGGACACAGGGGCTGCCGATTGTAGTCCGTTTAGTACCTTCTTCTTCAGCAAGATaGTGTCCTGGGGTGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATASLGTQGLPIVVRLVPSSSAR*CPGVCS Trigger: AGAACACACCCCAGGACACCATCTTGCTGAAGAAGA...AGGTACTAAACGGACTACAATCGGCAGCCCCTGTGTCCCAAGGGAAGCGGTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGAAGCCTGCCCAGCTCCTACATGGGCACCTGCTCTTATATTGAGTTCAAGCCCGTTGCCAACACTTaGGCTCCTCCAATGCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CRSLPSSYMGTCSYIEFKPVANT*APPMPK Trigger: CTTAGGCATTGGAGGAGCTCAAGTGTTGGCAACGGG...CTTGAACTCAATATAAGAGCAGGTGCCCATGTAGGAGCTGGGCAGGCTTCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227871.2 |
||
| CDS-3UTR GCA 90 bp | TTGACGTGGACACAATGTTGTTGTAGAAGCCTGCCCAGCTCCTACATGGGCACCCAAGGCAAGGAAACCTaGAGATATGGCTACTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTWTQCCCRSLPSSYMGTQGKET*RYGYSH Trigger: GTGGGAGTAGCCATATCTGCAGGTTTCCTTGCCTTG...GGTGCCCATGTAGGAGCTGGGCAGGCTTCTACAACAACATTGTGTCCACGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCTCACTTACCCCTAGGCTGTCCTCTGTTCCCTCAGAAGGTCACTCTTGGAAACCTGCAGATATaGCTACTCCCACTGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPHLPLGCPLFPQKVTLGNLQI*LLPLPY Trigger: GTATGGCAGTGGGAGTAGCCATATCTGCAGGTTTCC...AAGAGTGACCTTCTGAGGGAACAGAGGACAGCCTAGGGGTAAGTGAGGAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGAAGCTGTCTTGGCTTGGACTATGAGCCATGCTGGGGTGAGGTTTCATGGAAACCTGCAGATATaGCTACTCCCACTGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: EEEAVLAWTMSHAGVRFHGNLQI*LLPLPY Trigger: GTATGGCAGTGGGAGTAGCCATATCTGCAGGTTTCC...ATGAAACCTCACCCCAGCATGGCTCATAGTCCAAGCCAAGACAGCTTCCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS-3UTR CCA 90 bp | GATTCAGGGTTTCCTTTTGCCCTGCTGTCCATTCGAGCACTTCCCCTCGCAGATCTCCCGGGCATCTCTTaGGCTTTTCTTCTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSGFPFALLSIRALPLADLPGIS*AFLLQQ Trigger: TTGCTGAAGAAGAAAAGCCCAAGAGATGCCCGGGAG...ATCTGCGAGGGGAAGTGCTCGAATGGACAGCAGGGCAAAAGGAAACCCTGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCTACAAAACTAAGCCTGAATGCTAACAGCCCCACAGTGCTGAGGAGGAAGCCCGTTGCCAACACTTaGGCTCCTCCAATGCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKLSLNANSPTVLRRKPVANT*APPMPK Trigger: CTTAGGCATTGGAGGAGCTCAAGTGTTGGCAACGGG...CTTCCTCCTCAGCACTGTGGGGCTGTTAGCATTCAGGCTTAGTTTTGTAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCTACAAAACTAAGCCTGAATGCTAACAGCCCCACAGTGCTGAGGAGGAAGCAGTCTCAGCAGGCTTaGCCGTTGCCAACACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKLSLNANSPTVLRRKQSQQA*PLPTLE Trigger: CTCAAGTGTTGGCAACGGGCAAGCCTGCTGAGACTG...CTTCCTCCTCAGCACTGTGGGGCTGTTAGCATTCAGGCTTAGTTTTGTAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS-3UTR GCA 90 bp | TGTTGTAGAAGCCTGCCCAGCTCCTACATGGGCACCTGCTCTTATATTGAGTTCCTTGAGCTCCTCCAATaGCTAAGAGGAAGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CCRSLPSSYMGTCSYIEFLELLQ*LRGRGG Trigger: TCCTCCTCTTCCTCTTAGGCATTGGAGGAGCTCAAG...GAACTCAATATAAGAGCAGGTGCCCATGTAGGAGCTGGGCAGGCTTCTACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227871.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGAAGCCTGCCCAGCTCCTACATGGGCACCTGCTCTTATATTGAGTTCAAGCTCCCGGGCATCTCTTaGGCTTTTCTTCTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRSLPSSYMGTCSYIEFKLPGIS*AFLLQQ Trigger: TTGCTGAAGAAGAAAAGCCCAAGAGATGCCCGGGAG...CTTGAACTCAATATAAGAGCAGGTGCCCATGTAGGAGCTGGGCAGGCTTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227871.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGCACCTAGGTTGAGAAATACAGATTCAGGGTTTCCTTTTGCCCTGCTGCTTGAGCTCCTCCAATaGCTAAGAGGAAGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWAPRLRNTDSGFPFALLLELLQ*LRGRGG Trigger: TCCTCCTCTTCCTCTTAGGCATTGGAGGAGCTCAAG...CAGCAGGGCAAAAGGAAACCCTGAATCTGTATTTCTCAACCTAGGTGCCCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| 3UTR CAA 72 bp | GCCTGCCCAGCTCCTACATGGGCACCTGCTCTTATATaGAGTTCAAGTAATGATCCATCATTGGCCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ACPAPTWAPALI*SSSNDPSLALD Trigger: ATCCAAGGCCAATGATGGATCATTACTTGAACTCAATATAAGAGCAGGTGCCCATGTAGGAGCTGGGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227871.2 |
||
| CDS-3UTR CAA 90 bp | TACTCTCCCAGAACAGGAGCGACCGCTTCCCTTGGGACACAGGGGCTGCCGATTCAGCAGGCTTGCCCGTaGCCAACACTTGAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YSPRTGATASLGTQGLPIQQACP*PTLELL Trigger: GAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCTG...AATCGGCAGCCCCTGTGTCCCAAGGGAAGCGGTCGCTCCTGTTCTGGGAGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227060.2 |
||
| CDS-3UTR CAA 90 bp | CCCCACAGTGCTGAGGAGGAAGCTGTCTTGGCTTGGACTATGAGCCATGCTGGGCAGCAGGCTTGCCCGTaGCCAACACTTGAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PHSAEEEAVLAWTMSHAGQQACP*PTLELL Trigger: GAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCTG...CCCAGCATGGCTCATAGTCCAAGCCAAGACAGCTTCCTCCTCAGCACTGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGAAGCCTGCCCAGCTCCTACATGGGCACCTGCTCTTATATTGAGTTCAAGCAGCAGGCTTGCCCGTaGCCAACACTTGAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRSLPSSYMGTCSYIEFKQQACP*PTLELL Trigger: GAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCTG...CTTGAACTCAATATAAGAGCAGGTGCCCATGTAGGAGCTGGGCAGGCTTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227871.2 |
||
| CDS TCA 90 bp | ATGGTGTCTATCTCAGTCTCAGCAGGCTTGCCCGTTGCCAACACTTaGGCTCCTCCAATGCCTAAGAGGAAGAGGAGGACTCTCAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: MVSISVSAGLPVANT*APPMPKRKRRTLSN Trigger: ATTACTGAGAGTCCTCCTCTTCCTCTTAGGCATTGGAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCTGAGACTGAGATAGACACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227060.2 |
||
| CDS CCA 90 bp | GCTCAATCTCCCGGGCATCTCTTGGGCTTTTCTTCTTCAGCAAGATaGTGTCCTGGGGTGTGTTCTTCAGGTCTGCAGAGTCATTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQSPGHLLGFSSSAR*CPGVCSSGLQSHYQ Trigger: CTGATAATGACTCTGCAGACCTGAAGAACACACCCCAGGACACCATCTTGCTGAAGAAGAAAAGCCCAAGAGATGCCCGGGAGATTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS CCA 90 bp | TCCCGGGCATCTCTTGGGCTTTTCTTCTTCAGCAAGATGGTGTCCTaGGGTGTGTTCTTCAGGTCTGCAGAGTCATTATCAGACAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRASLGLFFFSKMVS*GVFFRSAESLSDKC Trigger: ACACTTGTCTGATAATGACTCTGCAGACCTGAAGAACACACCCCAGGACACCATCTTGCTGAAGAAGAAAAGCCCAAGAGATGCCCGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS-3UTR CAA 90 bp | GCGACCGCTTCCCTTGGGACACAGGGGCTGCCGATTGTAGTCCGTTTAGTACCTCCAATGATGGCATATTaGAAATCTATCTCAGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ATASLGTQGLPIVVRLVPPMMAY*KSISVS Trigger: TGAGACTGAGATAGATTTCAAATATGCCATCATTGG...AGGTACTAAACGGACTACAATCGGCAGCCCCTGTGTCCCAAGGGAAGCGGTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039191.8 |
||
| CDS TCA 90 bp | TTGAAATCTATCTCAGTCTCAGCAGGCTTGCCCGTTGCCAACACTTaGGCTCCTCCAATGCCTAAGAGGAAGAGGAGGACTCTCAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LKSISVSAGLPVANT*APPMPKRKRRTLSN Trigger: ATTACTGAGAGTCCTCCTCTTCCTCTTAGGCATTGGAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCTGAGACTGAGATAGATTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS GCA 90 bp | TTTTCTTCTTCAGCAAGATGGTGTCTATCTCAGTCTCAGCAGGCTTaGCCGTTGCCAACACTTGAGCTCCTCCAATGCCTAAGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSSSARWCLSQSQQA*PLPTLELLQCLRGR Trigger: TCTTCCTCTTAGGCATTGGAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCTGAGACTGAGATAGACACCATCTTGCTGAAGAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227060.2 |
||
| CDS GCA 90 bp | TCTTCAGGTCTGCAGAGTCATTATCAGACAAGTGTCTCCGGATCATaGAGATCTTCAAGGCAAGGAAACCTGCAGATATGGCTACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSGLQSHYQTSVSGS*RSSRQGNLQIWLLP Trigger: TGGGAGTAGCCATATCTGCAGGTTTCCTTGCCTTGAAGATCTGCATGATCCGGAGACACTTGTCTGATAATGACTCTGCAGACCTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS GCA 90 bp | AGACAAGTGTCTCCGGATCATGCAGATCTTCAAGGCAAGGAAACCTaGAGATATGGCTACTCCCACTGCCATACCAATGATGGCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: RQVSPDHADLQGKET*RYGYSHCHTNDGIF Trigger: AAATATGCCATCATTGGTATGGCAGTGGGAGTAGCCATATCTGCAGGTTTCCTTGCCTTGAAGATCTGCATGATCCGGAGACACTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS GCA 90 bp | TTTCTTCTTCAGCAAGATGGTGTCCTGGGGTGTGTTCTTCAGGTCTaGAGAGTCATTATCAGACAAGTGTCTCCGGATCATGCAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLLQQDGVLGCVLQV*RVIIRQVSPDHADL Trigger: AAGATCTGCATGATCCGGAGACACTTGTCTGATAATGACTCTGCAGACCTGAAGAACACACCCCAGGACACCATCTTGCTGAAGAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS GCA 90 bp | GCAGATCTTCAAGGCAAGGAAACCTGCAGATATGGCTACTCCCACTaGCATACCAATGATGGCATATTTGAAATCTATCTCAGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ADLQGKETCRYGYSH*HTNDGIFEIYLSLS Trigger: GCTGAGACTGAGATAGATTTCAAATATGCCATCATTGGTATGGCAGTGGGAGTAGCCATATCTGCAGGTTTCCTTGCCTTGAAGATCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS-3UTR CAA 90 bp | ACACAATGTTGTTGTAGAAGCCTGCCCAGCTCCTACATGGGCACCTGCTCTTATCCAATGATGGCATATTaGAAATCTATCTCAGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TQCCCRSLPSSYMGTCSYPMMAY*KSISVS Trigger: TGAGACTGAGATAGATTTCAAATATGCCATCATTGG...ATAAGAGCAGGTGCCCATGTAGGAGCTGGGCAGGCTTCTACAACAACATTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227871.2 |
||
| CDS CCA 72 bp | CCCGGGCATCTCTTGGGCTTTTCTTCTTCAGCAAGATaGTGTCCTGGGGTGTGTTCTTCAGGTCTGCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PGHLLGFSSSAR*CPGVCSSGLQS Trigger: ACTCTGCAGACCTGAAGAACACACCCCAGGACACCATCTTGCTGAAGAAGAAAAGCCCAAGAGATGCCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS CCA 72 bp | CCCGGGCATCTCTTGGGCTTTTCTTCTTCAGCAAGATaGTGTCTATCTCAGTCTCAGCAGGCTTGCCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGHLLGFSSSAR*CLSQSQQACPL Trigger: CAACGGGCAAGCCTGCTGAGACTGAGATAGACACCATCTTGCTGAAGAAGAAAAGCCCAAGAGATGCCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227060.2 |
||
| CDS GCA 72 bp | TCAGCAAGATGGTGTCTATCTCAGTCTCAGCAGGCTTaGCCGTTGCCAACACTTGAGCTCCTCCAATGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SARWCLSQSQQA*PLPTLELLQCL Trigger: TAGGCATTGGAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCTGAGACTGAGATAGACACCATCTTGCTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227060.2 |
||
| CDS CAA 72 bp | AGATGGTGTCTATCTCAGTCTCAGCAGGCTTGCCCGTaGCCAACACTTGAGCTCCTCCAATGCCTAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RWCLSQSQQACP*PTLELLQCLRG Trigger: TCCTCTTAGGCATTGGAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCTGAGACTGAGATAGACACCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227060.2 |
||
| CDS CAA 90 bp | TCTTCAGCAAGATGGTGTCTATCTCAGTCTCAGCAGGCTTGCCCGTaGCCAACACTTGAGCTCCTCCAATGCCTAAGAGGAAGAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSARWCLSQSQQACP*PTLELLQCLRGRGG Trigger: TCCTCCTCTTCCTCTTAGGCATTGGAGGAGCTCAAGTGTTGGCAACGGGCAAGCCTGCTGAGACTGAGATAGACACCATCTTGCTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227060.2 |
||
| CDS GCA 72 bp | CAGCAAGATGGTGTCCTGGGGTGTGTTCTTCAGGTCTaGAGAGTCATTATCAGACAAGTGTCTCCGGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: QQDGVLGCVLQV*RVIIRQVSPDH Trigger: ATGATCCGGAGACACTTGTCTGATAATGACTCTGCAGACCTGAAGAACACACCCCAGGACACCATCTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS CAA 90 bp | CCTGCAGATATGGCTACTCCCACTGCCATACCAATGATGGCATATTaGAAATCTATCTCAGTCTCAGCAGGCTTGCCCGTTGCCAACACT | + |
|
Preference number: 6 (lower is better) Translates to: PADMATPTAIPMMAY*KSISVSAGLPVANT Trigger: AGTGTTGGCAACGGGCAAGCCTGCTGAGACTGAGATAGATTTCAAATATGCCATCATTGGTATGGCAGTGGGAGTAGCCATATCTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS GCA 72 bp | TCTCCGGATCATGCAGATCTTCAAGGCAAGGAAACCTaGAGATATGGCTACTCCCACTGCCATACCAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: SPDHADLQGKET*RYGYSHCHTND Trigger: ATCATTGGTATGGCAGTGGGAGTAGCCATATCTGCAGGTTTCCTTGCCTTGAAGATCTGCATGATCCGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS CCA 72 bp | TCTCTTGGGCTTTTCTTCTTCAGCAAGATGGTGTCCTaGGGTGTGTTCTTCAGGTCTGCAGAGTCATTATCA | + |
|
Preference number: 6 (lower is better) Translates to: SLGLFFFSKMVS*GVFFRSAESLS Trigger: TGATAATGACTCTGCAGACCTGAAGAACACACCCCAGGACACCATCTTGCTGAAGAAGAAAAGCCCAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||
| CDS GCA 72 bp | CAAGGCAAGGAAACCTGCAGATATGGCTACTCCCACTaGCATACCAATGATGGCATATTTGAAATCTATCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGKETCRYGYSH*HTNDGIFEIYL Trigger: GAGATAGATTTCAAATATGCCATCATTGGTATGGCAGTGGGAGTAGCCATATCTGCAGGTTTCCTTGCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039191.8 ENSMUST00000227871.2 |
||