Pregenerated sensors for TMEM270 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040576Ensembl transcript IDs: ENSMUST00000047305.6, ENSMUST00000201316.4
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GACTTCCTGGGCCTGGGCCAGTTGGGTTGTGTGTTCAAAGGCAGCTaGAAGCAGGTGGGAAGCAAGGCAGGTCGTCCAAGTGACAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: DFLGLGQLGCVFKGS*KQVGSKAGRPSDKI Trigger: TATCTTGTCACTTGGACGACCTGCCTTGCTTCCCACCTGCTTCAAGCTGCCTTTGAACACACAACCCAACTGGCCCAGGCCCAGGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCCTGGGATTTGACTTCCTGGGCCTGGGCCAGTTGGGTTGTGTGTTCAAAGCCAGGTTCCAGGAAGTaGGTGTGGTCCTGTGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VSWDLTSWAWASWVVCSKPGSRK*VWSCVP Trigger: TGGAACACAGGACCACACTCACTTCCTGGAACCTGG...CTTTGAACACACAACCCAACTGGCCCAGGCCCAGGAAGTCAAATCCCAGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| 3UTR TCA 72 bp | AGAACTGAGGCGGGGGCCCCGAGGTCTCCTGGGATTTaGCTTCCTGGGCCTGGGCCAGTTGGGTTGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: RTEAGAPRSPGI*LPGPGPVGLCV Trigger: AACACACAACCCAACTGGCCCAGGCCCAGGAAGTCAAATCCCAGGAGACCTCGGGGCCCCCGCCTCAGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| 3UTR CCA 72 bp | GGGTTTCAGGCTGGGGTGGGAGGGGTCCAGACTCAGTaGTGGAGGATTCTGGAATTAAGAACTGAGGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GFQAGVGGVQTQ*WRILELRTEAG Trigger: CCCCGCCTCAGTTCTTAATTCCAGAATCCTCCACCACTGAGTCTGGACCCCTCCCACCCCAGCCTGAAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| 3UTR TCA 72 bp | CCAGACTCAGTGGTGGAGGATTCTGGAATTAAGAACTaGGGCGGGGGCCCCGAGGTCTCCTGGGATTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: PDSVVEDSGIKN*GGGPEVSWDLT Trigger: AGTCAAATCCCAGGAGACCTCGGGGCCCCCGCCTCAGTTCTTAATTCCAGAATCCTCCACCACTGAGTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCCTGGGCCAGTTGGGTTGTGTGTTCAAAGGCAGCTTGAAGCAGGTGGGCAAGTCGGCCAAGTTTaGGCCCCGGCCCCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGPGPVGLCVQRQLEAGGQVGQV*APAPAL Trigger: CAGGGCTGGGGCCGGGGCTCAAACTTGGCCGACTTG...CCCACCTGCTTCAAGCTGCCTTTGAACACACAACCCAACTGGCCCAGGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGGAAGCAAGGCAGGTCGTCCAAGTGACAAGATAGGCCAGGTTCCAGGAGAACCCCGGGCTTCCTaGGCCAGCCCCAACACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVGSKAGRPSDKIGQVPGEPRAS*ASPNTQ Trigger: CTGGGTGTTGGGGCTGGCCCAGGAAGCCCGGGGTTC...TCCTGGAACCTGGCCTATCTTGTCACTTGGACGACCTGCCTTGCTTCCCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTTGAAGCAGGTGGGAAGCAAGGCAGGTCGTCCAAGTGACAAGATAGGCGTTCTGGATCAGCAGTaGAGAGAGCCTCCCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSLKQVGSKAGRPSDKIGVLDQQ*REPPSP Trigger: CGGGCTGGGAGGCTCTCTGCACTGCTGATCCAGAAC...GCCTATCTTGTCACTTGGACGACCTGCCTTGCTTCCCACCTGCTTCAAGCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| 3UTR CAA 72 bp | GGCCTGGGCCAGTTGGGTTGTGTGTTCAAAGGCAGCTaGAAGCAGGTGGGAAGCAAGGCAGGTCGTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGQLGCVFKGS*KQVGSKAGRPS Trigger: ACTTGGACGACCTGCCTTGCTTCCCACCTGCTTCAAGCTGCCTTTGAACACACAACCCAACTGGCCCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGGTGGGAGGGGTCCAGACTCAGTGGTGGAGGATTCTGGAATTAAGAACTCACAGACACAGAGATaGCCCAGGGCCAACCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GWGGRGPDSVVEDSGIKNSQTQR*PRANLT Trigger: TGTGAGGTTGGCCCTGGGGCATCTCTGTGTCTGTGA...GTTCTTAATTCCAGAATCCTCCACCACTGAGTCTGGACCCCTCCCACCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR GCA 90 bp | GGATTTGACTTCCTGGGCCTGGGCCAGTTGGGTTGTGTGTTCAAAGGCAGCTTGAGCAACACAGAATTCTaGAGGAGGGTCCGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFDFLGLGQLGCVFKGSLSNTEF*RRVRPG Trigger: GCCTGGCCGGACCCTCCTGCAGAATTCTGTGTTGCT...CAAGCTGCCTTTGAACACACAACCCAACTGGCCCAGGCCCAGGAAGTCAAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR TCA 90 bp | TTGAAGCAGGTGGGAAGCAAGGCAGGTCGTCCAAGTGACAAGATAGGCCAGGTTCCCAACACCCAGTGCTaGAAGATGGCCATCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQVGSKAGRPSDKIGQVPNTQC*KMAIFR Trigger: CCTGAAGATGGCCATCTTTCAGCACTGGGTGTTGGG...AACCTGGCCTATCTTGTCACTTGGACGACCTGCCTTGCTTCCCACCTGCTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR GCA 90 bp | GTGTTCAAAGGCAGCTTGAAGCAGGTGGGAAGCAAGGCAGGTCGTCCAAGTGACACCAGCATCAGGCTGTaGAGGCAGGATAGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFKGSLKQVGSKAGRPSDTSIRL*RQDRNR Trigger: CCTGTTTCTATCCTGCCTGCACAGCCTGATGCTGGT...GTCACTTGGACGACCTGCCTTGCTTCCCACCTGCTTCAAGCTGCCTTTGAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR TCA 90 bp | CGTCCAAGTGACAAGATAGGCCAGGTTCCAGGAAGTGAGTGTGGTCCTGTGTTCATAGAAACAGGTCCCTaGAGGTGGCTGGAGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPSDKIGQVPGSECGPVFIETGP*RWLETD Trigger: GTCTGTCTCCAGCCACCTTCAGGGACCTGTTTCTAT...GAACACAGGACCACACTCACTTCCTGGAACCTGGCCTATCTTGTCACTTGGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR TCA 90 bp | TTGAAGCAGGTGGGAAGCAAGGCAGGTCGTCCAAGTGACAAGATAGGCCAGGTTCAGCCCAGACTAAAGTaGTGGGCTTTCTGCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKQVGSKAGRPSDKIGQVQPRLK*WAFCIS Trigger: GCTGATGCAGAAAGCCCATCACTTTAGTCTGGGCTG...AACCTGGCCTATCTTGTCACTTGGACGACCTGCCTTGCTTCCCACCTGCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR CCA 90 bp | CGTCCAAGTGACAAGATAGGCCAGGTTCCAGGAAGTGAGTGTGGTCCTGTGTTCAGAGCAGCAGCCACATaGGGACCCACAGCAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RPSDKIGQVPGSECGPVFRAAAT*GPTAML Trigger: TAACATTGCTGTGGGTCCCCATGTGGCTGCTGCTCT...GAACACAGGACCACACTCACTTCCTGGAACCTGGCCTATCTTGTCACTTGGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS-3UTR CCA 90 bp | TGGGATTTGACTTCCTGGGCCTGGGCCAGTTGGGTTGTGTGTTCAAAGGCAGCTAGCATTGGTAAGGACTaGAAGGATGGCTCAAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: WDLTSWAWASWVVCSKAASIGKD*KDGSSR Trigger: CCGACTTGAGCCATCCTTCCAGTCCTTACCAATGCT...AGCTGCCTTTGAACACACAACCCAACTGGCCCAGGCCCAGGAAGTCAAATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS TCA 90 bp | ACAGGTTATGATGACTTCCGGAAGCTGGCGGGCCTGGTCACTGCCTaGACCCCGGGCTTCCTGGGCCAGCCCCAACACCCAGTGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TGYDDFRKLAGLVTA*TPGFLGQPQHPVLK Trigger: TTTCAGCACTGGGTGTTGGGGCTGGCCCAGGAAGCCCGGGGTTCAGGCAGTGACCAGGCCCGCCAGCTTCCGGAAGTCATCATAACCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS CCA 90 bp | AAACTCAGAGCACAGGTTATGATGACTTCCGGAAGCTGGCGGGCCTaGTCACTGCCTGAACCCCGGGCTTCCTGGGCCAGCCCCAACACC | + |
|
Preference number: 5 (lower is better) Translates to: KLRAQVMMTSGSWRA*SLPEPRASWASPNT Trigger: GGTGTTGGGGCTGGCCCAGGAAGCCCGGGGTTCAGGCAGTGACCAGGCCCGCCAGCTTCCGGAAGTCATCATAACCTGTGCTCTGAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS CCA 90 bp | GAATTCTGCAGGAGGGTCCGGCCAGGCAAGAGCATTGGTAAGGACTaGAAGGATGGCTCAAGTCGGCCAAGTTTGAGCCCCGGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EFCRRVRPGKSIGKD*KDGSSRPSLSPGPS Trigger: GCTGGGGCCGGGGCTCAAACTTGGCCGACTTGAGCCATCCTTCCAGTCCTTACCAATGCTCTTGCCTGGCCGGACCCTCCTGCAGAATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS GCA 90 bp | CTGAAGGTGGCTGGAGACAGACCGAGAGGTTCACAGACACAGAGATaGCCCAGGGCCAACCTCACAGTACGAGTGCAGCACAGCCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: LKVAGDRPRGSQTQR*PRANLTVRVQHSPT Trigger: AGTCGGGCTGTGCTGCACTCGTACTGTGAGGTTGGCCCTGGGGCATCTCTGTGTCTGTGAACCTCTCGGTCTGTCTCCAGCCACCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS CCA 90 bp | ACCTCACAGTACGAGTGCAGCACAGCCCGACTCTGTATGCCAGCCTaGGTCCCCAGAGCAGCAGCCACATGGGGACCCACAGCAATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TSQYECSTARLCMPA*VPRAAATWGPTAML Trigger: TAACATTGCTGTGGGTCCCCATGTGGCTGCTGCTCTGGGGACCCAGGCTGGCATACAGAGTCGGGCTGTGCTGCACTCGTACTGTGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS GCA 90 bp | GCTGAAAGATGGCCATCTTCAGGAGCAGAAAGCGGTACAAGTGAGTaGGGTTCTGGATCAGCAGTGCAGAGAGCCTCCCAGCCCGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AERWPSSGAESGTSE*GSGSAVQRASQPAE Trigger: TTCTGCGGGCTGGGAGGCTCTCTGCACTGCTGATCCAGAACCGCACTCACTTGTACCGCTTTCTGCTCCTGAAGATGGCCATCTTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS TCA 90 bp | AAGCTACCAGCATCAGGCTGTGCAGGCAGGATAGAAACAGGTCCCTaGAGGTGGCTGGAGACAGACCGAGAGGTTCACAGACACAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLPASGCAGRIETGP*RWLETDREVHRHRD Trigger: ATCTCTGTGTCTGTGAACCTCTCGGTCTGTCTCCAGCCACCTTCAGGGACCTGTTTCTATCCTGCCTGCACAGCCTGATGCTGGTAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGCAGGTCGTCCAAGTGACAAGATAGGCCAGGTTCCAGGAAGTGAGTGTGGCCAGGCAAGAGCATaGGTAAGGACTGGAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SKAGRPSDKIGQVPGSECGQARA*VRTGRM Trigger: CATCCTTCCAGTCCTTACCAATGCTCTTGCCTGGCC...ACACTCACTTCCTGGAACCTGGCCTATCTTGTCACTTGGACGACCTGCCTTGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS TCA 72 bp | GATGACTTCCGGAAGCTGGCGGGCCTGGTCACTGCCTaGACCCCGGGCTTCCTGGGCCAGCCCCAACACCCA | + |
|
Preference number: 6 (lower is better) Translates to: DDFRKLAGLVTA*TPGFLGQPQHP Trigger: TGGGTGTTGGGGCTGGCCCAGGAAGCCCGGGGTTCAGGCAGTGACCAGGCCCGCCAGCTTCCGGAAGTCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS TCA 72 bp | GTAAGGACTGGAAGGATGGCTCAAGTCGGCCAAGTTTaGGCCCCGGCCCCAGCCCTGACTGGGCAGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRTGRMAQVGQV*APAPALTGQPA Trigger: GGCTGGCTGCCCAGTCAGGGCTGGGGCCGGGGCTCAAACTTGGCCGACTTGAGCCATCCTTCCAGTCCTTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS GCA 72 bp | CACAGAGATGCCCCAGGGCCAACCTCACAGTACGAGTaGAGCACAGCCCGACTCTGTATGCCAGCCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HRDAPGPTSQYE*STARLCMPAWV Trigger: GACCCAGGCTGGCATACAGAGTCGGGCTGTGCTGCACTCGTACTGTGAGGTTGGCCCTGGGGCATCTCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS GCA 72 bp | GCTGGAGACAGACCGAGAGGTTCACAGACACAGAGATaGCCCAGGGCCAACCTCACAGTACGAGTGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGDRPRGSQTQR*PRANLTVRVQH Trigger: GTGCTGCACTCGTACTGTGAGGTTGGCCCTGGGGCATCTCTGTGTCTGTGAACCTCTCGGTCTGTCTCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS CCA 72 bp | AAACTCAGAGCACAGGTTATGATGACTTCCGGAAGCTaGCGGGCCTGGTCACTGCCTGAACCCCGGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KLRAQVMMTSGS*RAWSLPEPRAS Trigger: GGAAGCCCGGGGTTCAGGCAGTGACCAGGCCCGCCAGCTTCCGGAAGTCATCATAACCTGTGCTCTGAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS CCA 72 bp | AGGAGGGTCCGGCCAGGCAAGAGCATTGGTAAGGACTaGAAGGATGGCTCAAGTCGGCCAAGTTTGAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRVRPGKSIGKD*KDGSSRPSLSP Trigger: GGGGCTCAAACTTGGCCGACTTGAGCCATCCTTCCAGTCCTTACCAATGCTCTTGCCTGGCCGGACCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047305.6 |
||
| CDS GCA 72 bp | TGGCCATCTTCAGGAGCAGAAAGCGGTACAAGTGAGTaGGGTTCTGGATCAGCAGTGCAGAGAGCCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPSSGAESGTSE*GSGSAVQRASQ Trigger: CTGGGAGGCTCTCTGCACTGCTGATCCAGAACCGCACTCACTTGTACCGCTTTCTGCTCCTGAAGATGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||
| CDS GCA 72 bp | AGCAGCAGCAGCAGCAAAGCTACCAGCATCAGGCTGTaGAGGCAGGATAGAAACAGGTCCCTGAAGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSKATSIRL*RQDRNRSLKVA Trigger: AGCCACCTTCAGGGACCTGTTTCTATCCTGCCTGCACAGCCTGATGCTGGTAGCTTTGCTGCTGCTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047305.6 ENSMUST00000201316.4 |
||