Pregenerated sensors for TMEM269 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028642Ensembl transcript IDs: ENSMUST00000030394.3, ENSMUST00000212054.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACAGCACAGGCATCTGGAAGCTTTCATGAGGACAGGCAGGTCTTaGTCCAGCATGCTAAGCGTAAAGCCCACAGAGCCAGCAGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: GQHRHLEAFMRTGRS*SSMLSVKPTEPAGV Trigger: CACTCCTGCTGGCTCTGTGGGCTTTACGCTTAGCATGCTGGACCAAGACCTGCCTGTCCTCATGAAAGCTTCCAGATGCCTGTGCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR TCA 90 bp | TCCTGTCTCTCTTGTTGCTGCTTCTTCAGCTCTGTAAGGGACCTGTaGGTGACAGGGCATTGGGTAGAAGCCACTCGAATAAACCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: SCLSCCCFFSSVRDL*VTGHWVEATRINPL Trigger: AAGGGGGTTTATTCGAGTGGCTTCTACCCAATGCCCTGTCACTCACAGGTCCCTTACAGAGCTGAAGAAGCAGCAACAAGAGAGACAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR CCA 90 bp | GAACCCTCAATAAGGAGAAAGAAGCAAAGGTTTCTGGGCCCACTGTaGGTTGATGTAATTCAAGACGAGAGTGCACCAAGCACAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: EPSIRRKKQRFLGPL*VDVIQDESAPSTGQ Trigger: CTGTCCTGTGCTTGGTGCACTCTCGTCTTGAATTACATCAACCCACAGTGGGCCCAGAAACCTTTGCTTCTTTCTCCTTATTGAGGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR CCA 90 bp | CTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATTATTTAACATaGGGTTCCTGTCTCTCTTGTTGCTGCTTCTTCAGCTCTGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: LGLSVGRQPLLDYLT*GSCLSCCCFFSSVR Trigger: CCTTACAGAGCTGAAGAAGCAGCAACAAGAGAGACAGGAACCCCATGTTAAATAATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR CAA 90 bp | AGGACAGCACAGGCATCTGGAAGCTTTCATGAGGACAGGCAGGTCTaGGTCCAGCATGCTAAGCGTAAAGCCCACAGAGCCAGCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: RTAQASGSFHEDRQV*VQHAKRKAHRASRS Trigger: ACTCCTGCTGGCTCTGTGGGCTTTACGCTTAGCATGCTGGACCAAGACCTGCCTGTCCTCATGAAAGCTTCCAGATGCCTGTGCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGCTCTGTAAGGGACCTGTGAGTGACAGGGCATTGGGTAGAAGCCACTCGATCCCAAAAGGAGTCTaGACCCTCAATAAGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LQLCKGPVSDRALGRSHSIPKGV*TLNKEK Trigger: TTTCTCCTTATTGAGGGTTCAGACTCCTTTTGGGAT...CGAGTGGCTTCTACCCAATGCCCTGTCACTCACAGGTCCCTTACAGAGCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTGCCAATCAATTTCTTTTGGAGATAGTCTCATGTGTCCAAGGCTGTGTTAGGACAGGCAGGTCTTaGTCCAGCATGCTAAGCGTA | + |
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Preference number: 2 (lower is better) Translates to: QAANQFLLEIVSCVQGCVRTGRS*SSMLSV Trigger: TACGCTTAGCATGCTGGACCAAGACCTGCCTGTCCT...AACACAGCCTTGGACACATGAGACTATCTCCAAAAGAAATTGATTGGCAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR CAA 90 bp | ACAGCCATTGTTAGATTATTTAACATGGGGTTCCTGTCTCTCTTGTaGCTGCTTCTTCAGCTCTGTAAGGGACCTGTGAGTGACAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TAIVRLFNMGFLSLL*LLLQLCKGPVSDRA Trigger: TGCCCTGTCACTCACAGGTCCCTTACAGAGCTGAAGAAGCAGCAACAAGAGAGACAGGAACCCCATGTTAAATAATCTAACAATGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR TCA 90 bp | GATCTTAGAAGCCAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATATCTGGAAGCTTTCATaGGGACAGGCAGGTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: DLRSQILGLSVGRQPLLDIWKLS*GQAGLG Trigger: ACCAAGACCTGCCTGTCCTCATGAAAGCTTCCAGAT...ATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTGGCTTCTAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CCA 90 bp | ATACACAGAGTGATACTTTCAGGCTGCCAATCAATTTCTTTTGGAGATAGTCTCAGGACAGGCAGGTCTTaGTCCAGCATGCTAAGCGTA | + |
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Preference number: 2 (lower is better) Translates to: IHRVILSGCQSISFGDSLRTGRS*SSMLSV Trigger: TACGCTTAGCATGCTGGACCAAGACCTGCCTGTCCT...GAGACTATCTCCAAAAGAAATTGATTGGCAGCCTGAAAGTATCACTCTGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATTATTTAACATGGATCTGGAAGCTTTCATaGGGACAGGCAGGTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: QILGLSVGRQPLLDYLTWIWKLS*GQAGLG Trigger: ACCAAGACCTGCCTGTCCTCATGAAAGCTTCCAGAT...CCATGTTAAATAATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGGGCATTGGGTAGAAGCCACTCGAATAAACCCCCTTTATTTATAGATAGATGGCATCTCTGCTCTTaGCTAATACACAGAGTGATA | + |
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Preference number: 2 (lower is better) Translates to: DRALGRSHSNKPPLFIDRWHLCS*LIHRVI Trigger: TATCACTCTGTGTATTAGTCAAGAGCAGAGATGCCA...TCTATCTATAAATAAAGGGGGTTTATTCGAGTGGCTTCTACCCAATGCCCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTTAGAAGCCAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATTGTCTCTCTTGTTGCTaGTTCTTCAGCTCTGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: DLRSQILGLSVGRQPLLDCLSCC*FFSSVR Trigger: CCTTACAGAGCTGAAGAAGCAGCAACAAGAGAGACA...ATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTGGCTTCTAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCTTGACTAATACACAGAGTGATACTTTCAGGCTGCCAATCAATTTCTTTTTTCTGGGCCCACTGTaGGTTGATGTAATTCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: LLLTNTQSDTFRLPINFFFLGPL*VDVIQD Trigger: GTCTTGAATTACATCAACCCACAGTGGGCCCAGAAA...AAAGAAATTGATTGGCAGCCTGAAAGTATCACTCTGTGTATTAGTCAAGAGCAG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATTATTTAACATGGTTTCTGGGCCCACTGTaGGTTGATGTAATTCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: QILGLSVGRQPLLDYLTWFLGPL*VDVIQD Trigger: GTCTTGAATTACATCAACCCACAGTGGGCCCAGAAA...CCATGTTAAATAATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCAGCTCTGTAAGGGACCTGTGAGTGACAGGGCATTGGGTAGAAGCCACTCGGAGGACAGGCAGGTCTaGGTCCAGCATGCTAAGCGT | + |
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Preference number: 3 (lower is better) Translates to: LQLCKGPVSDRALGRSHSEDRQV*VQHAKR Trigger: ACGCTTAGCATGCTGGACCAAGACCTGCCTGTCCTC...CGAGTGGCTTCTACCCAATGCCCTGTCACTCACAGGTCCCTTACAGAGCTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR CCA 72 bp | AGGCATCTGGAAGCTTTCATGAGGACAGGCAGGTCTTaGTCCAGCATGCTAAGCGTAAAGCCCACAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: RHLEAFMRTGRS*SSMLSVKPTEP Trigger: TGGCTCTGTGGGCTTTACGCTTAGCATGCTGGACCAAGACCTGCCTGTCCTCATGAAAGCTTCCAGATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGTATTATCCCAAAAGGAGTCTGAACCCTCAATAAGGAGAAAGAAGCAAAGGGAGGACAGGCAGGTCTaGGTCCAGCATGCTAAGCGT | + |
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Preference number: 3 (lower is better) Translates to: KVLSQKESEPSIRRKKQREDRQV*VQHAKR Trigger: ACGCTTAGCATGCTGGACCAAGACCTGCCTGTCCTC...CCTTTGCTTCTTTCTCCTTATTGAGGGTTCAGACTCCTTTTGGGATAATACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR CCA 72 bp | ATAAGGAGAAAGAAGCAAAGGTTTCTGGGCCCACTGTaGGTTGATGTAATTCAAGACGAGAGTGCACCAAGC | + |
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Preference number: 3 (lower is better) Translates to: IRRKKQRFLGPL*VDVIQDESAPS Trigger: GCTTGGTGCACTCTCGTCTTGAATTACATCAACCCACAGTGGGCCCAGAAACCTTTGCTTCTTTCTCCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CAA 90 bp | GATCTTAGAAGCCAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATGTGAGTGACAGGGCATaGGGTAGAAGCCACTCGAAT | + |
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Preference number: 3 (lower is better) Translates to: DLRSQILGLSVGRQPLLDVSDRA*GRSHSN Trigger: ATTCGAGTGGCTTCTACCCAATGCCCTGTCACTCAC...ATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTGGCTTCTAAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATTATTTAACATGGGTGAGTGACAGGGCATaGGGTAGAAGCCACTCGAAT | + |
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Preference number: 3 (lower is better) Translates to: QILGLSVGRQPLLDYLTWVSDRA*GRSHSN Trigger: ATTCGAGTGGCTTCTACCCAATGCCCTGTCACTCAC...CCATGTTAAATAATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CAA 90 bp | GATCTTAGAAGCCAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATTTCCTGTCTCTCTTGTaGCTGCTTCTTCAGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: DLRSQILGLSVGRQPLLDFLSLL*LLLQLC Trigger: ACAGAGCTGAAGAAGCAGCAACAAGAGAGACAGGAA...ATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTGGCTTCTAAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR CCA 72 bp | TCTGTTGGTAGACAGCCATTGTTAGATTATTTAACATaGGGTTCCTGTCTCTCTTGTTGCTGCTTCTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: SVGRQPLLDYLT*GSCLSCCCFFS Trigger: GCTGAAGAAGCAGCAACAAGAGAGACAGGAACCCCATGTTAAATAATCTAACAATGGCTGTCTACCAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CAA 90 bp | GATTATTTAACATGGGGTTCCTGTCTCTCTTGTTGCTGCTTCTTCAGCTCTGTAGCCAATCAATTTCTTTaGGAGATAGTCTCATGTGTC | + |
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Preference number: 3 (lower is better) Translates to: DYLTWGSCLSCCCFFSSVANQFL*EIVSCV Trigger: GACACATGAGACTATCTCCAAAAGAAATTGATTGGC...TACAGAGCTGAAGAAGCAGCAACAAGAGAGACAGGAACCCCATGTTAAATAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CAA 90 bp | GGACTTTCTGTTGGTAGACAGCCATTGTTAGATTATTTAACATGGGGTTCCTGTGCCAATCAATTTCTTTaGGAGATAGTCTCATGTGTC | + |
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Preference number: 3 (lower is better) Translates to: GLSVGRQPLLDYLTWGSCANQFL*EIVSCV Trigger: GACACATGAGACTATCTCCAAAAGAAATTGATTGGC...ACAGGAACCCCATGTTAAATAATCTAACAATGGCTGTCTACCAACAGAAAGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATTATTTAACATGGCTGGCATCTCTGCTCTaGACTAATACACAGAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: QILGLSVGRQPLLDYLTWLASLL*TNTQSD Trigger: ATCACTCTGTGTATTAGTCAAGAGCAGAGATGCCAG...CCATGTTAAATAATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR TCA 72 bp | AATTTACCTTGGAAACAAAAGTCTATCCTACATGACTaGTTAAAGTATTATCCCAAAAGGAGTCTGAACCCT | + |
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Preference number: 3 (lower is better) Translates to: NLPWKQKSILHD*LKYYPKRSLNP Trigger: AGGGTTCAGACTCCTTTTGGGATAATACTTTAATCAGTCATGTAGGATAGACTTTTGTTTCCAAGGTAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | CAGGTCTTGGTCCAGCATGCTAAGCGTAAAGCCCACAGAGCCAGCAGGAGTGGTGGCAGTAAAAGGCGGTaGGCGGGAACGGAGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: QVLVQHAKRKAHRASRSGGSKRR*AGTERK Trigger: TTTTCTCTCCGTTCCCGCTCACCGCCTTTTACTGCC...ACCACTCCTGCTGGCTCTGTGGGCTTTACGCTTAGCATGCTGGACCAAGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | CACAGGCATCTGGAAGCTTTCATGAGGACAGGCAGGTCTTGGTCCAGCATGCTAGGCAGTAAAAGGCGGTaGGCGGGAACGGAGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: HRHLEAFMRTGRSWSSMLGSKRR*AGTERK Trigger: TTTTCTCTCCGTTCCCGCTCACCGCCTTTTACTGCC...TAGCATGCTGGACCAAGACCTGCCTGTCCTCATGAAAGCTTCCAGATGCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | CTTCAGCTCTGTAAGGGACCTGTGAGTGACAGGGCATTGGGTAGAAGCCACTCGAGTAGGATTTCCTGCTaGAGCTGCAGAAGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LQLCKGPVSDRALGRSHSSRISC*SCRRWR Trigger: TCTCCATCTTCTGCAGCTTCAGCAGGAAATCCTACT...CGAGTGGCTTCTACCCAATGCCCTGTCACTCACAGGTCCCTTACAGAGCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | CTTCAGCTCTGTAAGGGACCTGTGAGTGACAGGGCATTGGGTAGAAGCCACTCGTGTCTAACAGGAAGCTaGTCAGAAGCATCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LQLCKGPVSDRALGRSHSCLTGS*SEASRK Trigger: CTTCCTGGATGCTTCTGATCAGCTTCCTGTTAGACA...CGAGTGGCTTCTACCCAATGCCCTGTCACTCACAGGTCCCTTACAGAGCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR CCA 90 bp | TTGGTCCAGCATGCTAAGCGTAAAGCCCACAGAGCCAGCAGGAGTGGTGACATGGAGTCCCAGTTTGTGTaGGATGTTGAGGTGTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: LVQHAKRKAHRASRSGDMESQFV*DVEVFG Trigger: ACCAAACACCTCAACATCCCACACAAACTGGGACTC...CATGTCACCACTCCTGCTGGCTCTGTGGGCTTTACGCTTAGCATGCTGGACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | TTGGTCCAGCATGCTAAGCGTAAAGCCCACAGAGCCAGCAGGAGTGGTGACATGGAAGAGAATCATGAGTaGAGCCATGCAGCAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LVQHAKRKAHRASRSGDMEENHE*SHAAEN Trigger: ATTCTCTGCTGCATGGCTTCACTCATGATTCTCTTC...CATGTCACCACTCCTGCTGGCTCTGTGGGCTTTACGCTTAGCATGCTGGACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR GCA 90 bp | TTGCTGCTTCTTCAGCTCTGTAAGGGACCTGTGAGTGACAGGGCATTGGGTAGAAGGATGCAACTTGAGTaGAGATTGGGGTCTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LLLLQLCKGPVSDRALGRRMQLE*RLGSPV Trigger: CACAGGAGACCCCAATCTGCACTCAAGTTGCATCCT...TCTACCCAATGCCCTGTCACTCACAGGTCCCTTACAGAGCTGAAGAAGCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212054.2 |
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| 3UTR CAA 72 bp | CTTCAGCTCTGTAAGGGACCTGTGAGTGACAGGGCATaGGGTAGAAGCCACTCGAATAAACCCCCTTTATTT | + |
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Preference number: 4 (lower is better) Translates to: LQLCKGPVSDRA*GRSHSNKPPLF Trigger: AAATAAAGGGGGTTTATTCGAGTGGCTTCTACCCAATGCCCTGTCACTCACAGGTCCCTTACAGAGCTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | GATTATTTAACATGGGGTTCCTGTCTCTCTTGTTGCTGCTTCTTCAGCTCTGTACCAGGCCAAAGGTGGTaGAGATGGCAAAATCATTCA | + |
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Preference number: 4 (lower is better) Translates to: DYLTWGSCLSCCCFFSSVPGQRW*RWQNHS Trigger: TGAATGATTTTGCCATCTTCACCACCTTTGGCCTGG...TACAGAGCTGAAGAAGCAGCAACAAGAGAGACAGGAACCCCATGTTAAATAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR CAA 72 bp | GTTAGATTATTTAACATGGGGTTCCTGTCTCTCTTGTaGCTGCTTCTTCAGCTCTGTAAGGGACCTGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VRLFNMGFLSLL*LLLQLCKGPVS Trigger: ACTCACAGGTCCCTTACAGAGCTGAAGAAGCAGCAACAAGAGAGACAGGAACCCCATGTTAAATAATCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | TTATCCCAAAAGGAGTCTGAACCCTCAATAAGGAGAAAGAAGCAAAGGTTTCTGGTTTGTGTGGGATGTTaGGGTGTTTGGTCATCGTTC | + |
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Preference number: 4 (lower is better) Translates to: LSQKESEPSIRRKKQRFLVCVGC*GVWSSF Trigger: GAACGATGACCAAACACCTCAACATCCCACACAAAC...CAGAAACCTTTGCTTCTTTCTCCTTATTGAGGGTTCAGACTCCTTTTGGGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | GATCTTAGAAGCCAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATGGTAGCTCCTCCAGTTaGATAAAAACACATGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: DLRSQILGLSVGRQPLLDGSSSS*IKTHAE Trigger: TTCCGCATGTGTTTTTATTCAACTGGAGGAGCTACC...ATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTGGCTTCTAAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTCCAAGGCTGTGTTTGAGTTTCAGCCTAAAATTTACCTTGGAAACAAAAAGTAGGATTTCCTGCTaGAGCTGCAGAAGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: MCPRLCLSFSLKFTLETKSRISC*SCRRWR Trigger: TCTCCATCTTCTGCAGCTTCAGCAGGAAATCCTACT...TTTTGTTTCCAAGGTAAATTTTAGGCTGAAACTCAAACACAGCCTTGGACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | CAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATTATTTAACATGGTGTCTAACAGGAAGCTaGTCAGAAGCATCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QILGLSVGRQPLLDYLTWCLTGS*SEASRK Trigger: CTTCCTGGATGCTTCTGATCAGCTTCCTGTTAGACA...CCATGTTAAATAATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | CAGATTCTTGGACTTTCTGTTGGTAGACAGCCATTGTTAGATTATTTAACATGGCCAGGCCAAAGGTGGTaGAGATGGCAAAATCATTCA | + |
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Preference number: 4 (lower is better) Translates to: QILGLSVGRQPLLDYLTWPGQRW*RWQNHS Trigger: TGAATGATTTTGCCATCTTCACCACCTTTGGCCTGG...CCATGTTAAATAATCTAACAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR GCA 90 bp | AGGAGAAAGAAGCAAAGGTTTCTGGGCCCACTGTGGGTTGATGTAATTCAAGACTTGAATAAAAACACATaGGGAAAGAAGTGGTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: RRKKQRFLGPLWVDVIQDLNKNT*GKKWLA Trigger: TGCTAACCACTTCTTTCCGCATGTGTTTTTATTCAA...GTCTTGAATTACATCAACCCACAGTGGGCCCAGAAACCTTTGCTTCTTTCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTCCAAGGCTGTGTTTGAGTTTCAGCCTAAAATTTACCTTGGAAACAAAAGGTAGCTCCTCCAGTTaGATAAAAACACATGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: MCPRLCLSFSLKFTLETKGSSSS*IKTHAE Trigger: TTCCGCATGTGTTTTTATTCAACTGGAGGAGCTACC...TTTTGTTTCCAAGGTAAATTTTAGGCTGAAACTCAAACACAGCCTTGGACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTCCAAGGCTGTGTTTGAGTTTCAGCCTAAAATTTACCTTGGAAACAAAAGAAGAGAATCATGAGTaGAGCCATGCAGCAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: MCPRLCLSFSLKFTLETKEENHE*SHAAEN Trigger: ATTCTCTGCTGCATGGCTTCACTCATGATTCTCTTC...TTTTGTTTCCAAGGTAAATTTTAGGCTGAAACTCAAACACAGCCTTGGACACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR GCA 90 bp | GACAGGGCATTGGGTAGAAGCCACTCGAATAAACCCCCTTTATTTATAGATAGATTGAATAAAAACACATaGGGAAAGAAGTGGTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: DRALGRSHSNKPPLFIDRLNKNT*GKKWLA Trigger: TGCTAACCACTTCTTTCCGCATGTGTTTTTATTCAA...TCTATCTATAAATAAAGGGGGTTTATTCGAGTGGCTTCTACCCAATGCCCTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| 3UTR CAA 72 bp | TCTTTTGGAGATAGTCTCATGTGTCCAAGGCTGTGTTaGAGTTTCAGCCTAAAATTTACCTTGGAAACAAAA | + |
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Preference number: 4 (lower is better) Translates to: SFGDSLMCPRLC*SFSLKFTLETK Trigger: TTTTGTTTCCAAGGTAAATTTTAGGCTGAAACTCAAACACAGCCTTGGACACATGAGACTATCTCCAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS TCA 90 bp | CAGTTGAATAAAAACACATGCGGAAAGAAGTGGTTAGCACATAGATaGTGGCCAGGAACCCATTCAGAGGCCCATCCACGCCCAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: QLNKNTCGKKWLAHR*WPGTHSEAHPRPAA Trigger: TGCTGCTGGGCGTGGATGGGCCTCTGAATGGGTTCCTGGCCATCATCTATGTGCTAACCACTTCTTTCCGCATGTGTTTTTATTCAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCTTGACTAATACACAGAGTGATACTTTCAGGCTGCCAATCAATTTCTTTAGCCCCAGGATCATGTaGGCCAGGGCCAAGGCATTA | + |
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Preference number: 5 (lower is better) Translates to: LLLTNTQSDTFRLPINFFSPRIM*ARAKAL Trigger: TAATGCCTTGGCCCTGGCCAACATGATCCTGGGGCT...AAAGAAATTGATTGGCAGCCTGAAAGTATCACTCTGTGTATTAGTCAAGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212054.2 |
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| CDS TCA 90 bp | ATCGTGTGGGTAGCAACTCTGGTCGATCATGAAGAGAATCATGAGTaGAGCCATGCAGCAGAGAATGAATGTATTGCCCTTAGTCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: IVWVATLVDHEENHE*SHAAENECIALSQK Trigger: CTTCTGACTAAGGGCAATACATTCATTCTCTGCTGCATGGCTTCACTCATGATTCTCTTCATGATCGACCAGAGTTGCTACCCACACGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS TCA 72 bp | CGCCCAGCAGCAGAGCCGAGGCCAGGCCAAAGGTGGTaGAGATGGCAAAATCATTCAGTTCGAGTCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: RPAAEPRPGQRW*RWQNHSVRVPV Trigger: AACTGGGACTCGAACTGAATGATTTTGCCATCTTCACCACCTTTGGCCTGGCCTCGGCTCTGCTGCTGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS CAA 72 bp | AGTTCGAGTCCCAGTTTGTGTGGGATGTTGAGGTGTTaGGTCATCGTTCCTATTGCAATGTCTAACAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSPSLCGMLRC*VIVPIAMSNRK Trigger: CTTCCTGTTAGACATTGCAATAGGAACGATGACCAAACACCTCAACATCCCACACAAACTGGGACTCGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS TCA 72 bp | GTAGCAACTCTGGTCGATCATGAAGAGAATCATGAGTaGAGCCATGCAGCAGAGAATGAATGTATTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: VATLVDHEENHE*SHAAENECIAL Trigger: AAGGGCAATACATTCATTCTCTGCTGCATGGCTTCACTCATGATTCTCTTCATGATCGACCAGAGTTGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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| CDS CAA 90 bp | AAATCATTCAGTTCGAGTCCCAGTTTGTGTGGGATGTTGAGGTGTTaGGTCATCGTTCCTATTGCAATGTCTAACAGGAAGCTGATCAGA | + |
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Preference number: 6 (lower is better) Translates to: KSFSSSPSLCGMLRC*VIVPIAMSNRKLIR Trigger: TCTGATCAGCTTCCTGTTAGACATTGCAATAGGAACGATGACCAAACACCTCAACATCCCACACAAACTGGGACTCGAACTGAATGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030394.3 ENSMUST00000212054.2 |
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