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Pregenerated sensors for TMEM266 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032313

Ensembl transcript IDs: ENSMUST00000034862.5, ENSMUST00000085754.10

Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCTCCAGCTCAGGGCTGGTCTGGACTGAGCCCAGTGGGGTAGGCTaGGCCAGGGGTGCTGGGTCCAAGGCCTTATGGGATGGGCAGGGG +
Preference number: 1 (lower is better)
Translates to: CSSSGLVWTEPSGVG*ARGAGSKALWDGQG
Trigger: CCCCTGCCCATCCCATAAGGCCTTGGACCCAGCACCCCTGGCCCAGCCTACCCCACTGGGCTCAGTCCAGACCAGCCCTGAGCTGGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 90 bp TGGCTGCTGGCACTCTGGGCCCTGGTGACTGAGCCACAGGTAGAGTaGGAGGTGGTCTCCGAGGTGGCGCTGGCGCAGGTGCTGTTGCCA +
Preference number: 1 (lower is better)
Translates to: WLLALWALVTEPQVE*EVVSEVALAQVLLP
Trigger: TGGCAACAGCACCTGCGCCAGCGCCACCTCGGAGACCACCTCCCACTCTACCTGTGGCTCAGTCACCAGGGCCCAGAGTGCCAGCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 90 bp TGGCCTCTGCCTGGCGTCACCTCCCTGGAGGCAGACAGCACCCTGTaGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTG +
Preference number: 1 (lower is better)
Translates to: WPLPGVTSLEADSTL*EIRWDPEPLVWPWV
Trigger: CACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAGGGTGCTGTCTGCCTCCAGGGAGGTGACGCCAGGCAGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR TCA 90 bp CACCCTCTCCTGAGTAGGGCAAAAGGAGGCCCCAGCTCTGGACTCTaGCTGAGGTCTGAGGCATGTGGCCTCTGCCTGGCGTCACCTCCC +
Preference number: 1 (lower is better)
Translates to: HPLLSRAKGGPSSGL*LRSEACGLCLASPP
Trigger: GGGAGGTGACGCCAGGCAGAGGCCACATGCCTCAGACCTCAGTCAGAGTCCAGAGCTGGGGCCTCCTTTTGCCCTACTCAGGAGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR TCA 90 bp GGGAGGTGGTCTCCGAGGTGGCGCTGGCGCAGGTGCTGTTGCCACTaGGCTTCAGAGGCAGGTCGACTGAGAAGAGGTCTGAGGGGACAT +
Preference number: 1 (lower is better)
Translates to: GRWSPRWRWRRCCCH*ASEAGRLRRGLRGH
Trigger: ATGTCCCCTCAGACCTCTTCTCAGTCGACCTGCCTCTGAAGCTCAGTGGCAACAGCACCTGCGCCAGCGCCACCTCGGAGACCACCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 90 bp CAGGGGTGCTGGGTCCAAGGCCTTATGGGATGGGCAGGGGTCCTTTaGCAGAGAGGACATCAGGTCCTGGACTGTGGCCTCTGCCACCAG +
Preference number: 1 (lower is better)
Translates to: QGCWVQGLMGWAGVL*QRGHQVLDCGLCHQ
Trigger: CTGGTGGCAGAGGCCACAGTCCAGGACCTGATGTCCTCTCTGTCAAAGGACCCCTGCCCATCCCATAAGGCCTTGGACCCAGCACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 90 bp GTGCTACAGTCTGTGGAGGAACCCAGTGTCTGGCTGCTGGCACTCTaGGCCCTGGTGACTGAGCCACAGGTAGAGTGGGAGGTGGTCTCC +
Preference number: 1 (lower is better)
Translates to: VLQSVEEPSVWLLAL*ALVTEPQVEWEVVS
Trigger: GGAGACCACCTCCCACTCTACCTGTGGCTCAGTCACCAGGGCCCAGAGTGCCAGCAGCCAGACACTGGGTTCCTCCACAGACTGTAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 90 bp ATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTaGCCCCCACACTCTACCCTGCTGAAGCTGGGCCATAGGCTGGTT +
Preference number: 1 (lower is better)
Translates to: IRGGHQERRQRKRLS*PPHSTLLKLGHRLV
Trigger: AACCAGCCTATGGCCCAGCTTCAGCAGGGTAGAGTGTGGGGGCCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR GCA 90 bp ACAGGGAGAGCCTCCTGGTTCTTCTGGTTGAACAGACTCACCCTATaGTCCAGCTCAGGGCTGGTCTGGACTGAGCCCAGTGGGGTAGGC +
Preference number: 1 (lower is better)
Translates to: TGRASWFFWLNRLTL*SSSGLVWTEPSGVG
Trigger: GCCTACCCCACTGGGCTCAGTCCAGACCAGCCCTGAGCTGGAGCATAGGGTGAGTCTGTTCAACCAGAAGAACCAGGAGGCTCTCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 90 bp GACAGCACCCTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATaGCCGTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGT +
Preference number: 1 (lower is better)
Translates to: DSTLWEIRWDPEPLV*PWVASGVLKYQDGC
Trigger: ACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAGGGTGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR CCA 90 bp GGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTaGTTGTGGCGGCTCCCTCAGCATTTCTGGAAAGACGGCTTGGGG +
Preference number: 1 (lower is better)
Translates to: GMREWQVRQARVWSP*LWRLPQHFWKDGLG
Trigger: CCCCAAGCCGTCTTTCCAGAAATGCTGAGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR CCA 90 bp GTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTaGTCTCCGTGGTTGTGGCGGCTCCCTCAGCATTTCTGGAAAGAC +
Preference number: 1 (lower is better)
Translates to: VHAGMREWQVRQARV*SPWLWRLPQHFWKD
Trigger: GTCTTTCCAGAAATGCTGAGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR TCA 90 bp CCTCCCATCCCCCTCCCGCTTCCAGATCCATCCCCTCATGGCCTGTaGAGACTTGGAAATGTCCATGCTGGAATGAGAGAATGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: PPIPLPLPDPSPHGL*RLGNVHAGMREWQV
Trigger: CACCTGCCATTCTCTCATTCCAGCATGGACATTTCCAAGTCTTCACAGGCCATGAGGGGATGGATCTGGAAGCGGGAGGGGGATGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR TCA 90 bp GTATGGGAGCACCTGCCCATATGTGAGTGGGGCCAGGGGTTGAGTTaGGACAGGATCTCTCCTAGAGACTGGAATTTGCCAGCTGGCTAC +
Preference number: 1 (lower is better)
Translates to: VWEHLPICEWGQGLS*DRISPRDWNLPAGY
Trigger: GTAGCCAGCTGGCAAATTCCAGTCTCTAGGAGAGATCCTGTCTCAACTCAACCCCTGGCCCCACTCACATATGGGCAGGTGCTCCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 90 bp CATGAGTATGGGAGCACCTGCCCATATGTGAGTGGGGCCAGGGGTTaGGTTGAGACAGGATCTCTCCTAGAGACTGGAATTTGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: HEYGSTCPYVSGARG*VETGSLLETGICQL
Trigger: CAGCTGGCAAATTCCAGTCTCTAGGAGAGATCCTGTCTCAACTCAACCCCTGGCCCCACTCACATATGGGCAGGTGCTCCCATACTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 90 bp AGATCCATCCCCTCATGGCCTGTGAAGACTTGGAAATGTCCATGCTaGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCC +
Preference number: 1 (lower is better)
Translates to: RSIPSWPVKTWKCPC*NERMAGETGSGVVS
Trigger: GGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATTTCCAAGTCTTCACAGGCCATGAGGGGATGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR CCA 90 bp AGAGGCAGGTCGACTGAGAAGAGGTCTGAGGGGACATTGGGCTGGTaGATGTCTATGGCAGCTGTAGTGACCACACATACTGCTGGTTCT +
Preference number: 1 (lower is better)
Translates to: RGRSTEKRSEGTLGW*MSMAAVVTTHTAGS
Trigger: AGAACCAGCAGTATGTGTGGTCACTACAGCTGCCATAGACATCCACCAGCCCAATGTCCCCTCAGACCTCTTCTCAGTCGACCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 90 bp TTCAGAGGCAGGTCGACTGAGAAGAGGTCTGAGGGGACATTGGGCTaGTGGATGTCTATGGCAGCTGTAGTGACCACACATACTGCTGGT +
Preference number: 1 (lower is better)
Translates to: FRGRSTEKRSEGTLG*WMSMAAVVTTHTAG
Trigger: ACCAGCAGTATGTGTGGTCACTACAGCTGCCATAGACATCCACCAGCCCAATGTCCCCTCAGACCTCTTCTCAGTCGACCTGCCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 90 bp CATGAATCGGGACCCACAACACTTCCCGATAGAAGTGCTTCTCAGTaGAAGCACTTCTCAGCTAGTGCTTTGGCCTCGAGGTCCACCTTG +
Preference number: 1 (lower is better)
Translates to: HESGPTTLPDRSASQ*KHFSASALASRSTL
Trigger: CAAGGTGGACCTCGAGGCCAAAGCACTAGCTGAGAAGTGCTTCCACTGAGAAGCACTTCTATCGGGAAGTGTTGTGGGTCCCGATTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR GCA 90 bp CTTAAACTGAGGGAAATGTTGCCAGTTCCCCTCGGTGAACTGAAGTaGAGACATGTGACATTCTTTTACCAGTCACCCATGAATCGGGAC +
Preference number: 1 (lower is better)
Translates to: LKLREMLPVPLGELK*RHVTFFYQSPMNRD
Trigger: GTCCCGATTCATGGGTGACTGGTAAAAGAATGTCACATGTCTGCACTTCAGTTCACCGAGGGGAACTGGCAACATTTCCCTCAGTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 90 bp ATGGTCTGGGAGGAGAGCCTCACATGTGGGCCTTTTAAGCCAAGATaGAGAAATATCTTCACAATAGACCAACCTAGTCCATCCCAATCA +
Preference number: 1 (lower is better)
Translates to: MVWEESLTCGPFKPR*RNIFTIDQPSPSQS
Trigger: TGATTGGGATGGACTAGGTTGGTCTATTGTGAAGATATTTCTTCATCTTGGCTTAAAAGGCCCACATGTGAGGCTCTCCTCCCAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR GCA 90 bp AGGTCTGCCTGCTTTTGCCTCCTGAGTGTTGAAATTAAAGGTGTTTaGCCCACTAAGAAAGGTTATATTGATCACACTTTGCCTCCGTCA +
Preference number: 1 (lower is better)
Translates to: RSACFCLLSVEIKGV*PTKKGYIDHTLPPS
Trigger: TGACGGAGGCAAAGTGTGATCAATATAACCTTTCTTAGTGGGGCAAACACCTTTAATTTCAACACTCAGGAGGCAAAAGCAGGCAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 90 bp AAGAATTTCAAGGACTGTAAAATCCAAACTCAAGGTTTGAAACTTTaGCTACTGAAAACCAGTATGATAACAGGTCTGGGTATGCAATCA +
Preference number: 1 (lower is better)
Translates to: KNFKDCKIQTQGLKL*LLKTSMITGLGMQS
Trigger: TGATTGCATACCCAGACCTGTTATCATACTGGTTTTCAGTAGCCAAAGTTTCAAACCTTGAGTTTGGATTTTACAGTCCTTGAAATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR GCA 90 bp GAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCTGAGGCATGTGGCCTCTaGCTGGCGTCACCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: EWQVRQARVWSPWLWRLPEACGL*LASPPW
Trigger: CCAGGGAGGTGACGCCAGGCAGAGGCCACATGCCTC...AGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp GAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGCCCATGTGGCCTCTGCCTaGCGTCACCTCCCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: ENPGWASGTKATKEAELAHVASA*RHLPGG
Trigger: GCCTCCAGGGAGGTGACGCCAGGCAGAGGCCACATG...GGCCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR CAA 90 bp GTAGAGTGGGAGGTGGTCTCCGAGGTGGCGCTGGCGCAGGTGCTGTaGCCACTGAGCTTCAGAGGCAGGTCGACTGAGAAGAGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: VEWEVVSEVALAQVL*PLSFRGRSTEKRSE
Trigger: CTCAGACCTCTTCTCAGTCGACCTGCCTCTGAAGCTCAGTGGCAACAGCACCTGCGCCAGCGCCACCTCGGAGACCACCTCCCACTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CAA 90 bp CCAGGGGTGCTGGGTCCAAGGCCTTATGGGATGGGCAGGGGTCCTTaGACAGAGAGGACATCAGGTCCTGGACTGTGGCCTCTGCCACCA +
Preference number: 2 (lower is better)
Translates to: PGVLGPRPYGMGRGP*TERTSGPGLWPLPP
Trigger: TGGTGGCAGAGGCCACAGTCCAGGACCTGATGTCCTCTCTGTCAAAGGACCCCTGCCCATCCCATAAGGCCTTGGACCCAGCACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp AGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCCCCAGCTCTGGACTCTaGCTGAGGTCTGAGGCATGT +
Preference number: 2 (lower is better)
Translates to: RMAGETGSGVVSVVVAAPPSSGL*LRSEAC
Trigger: ACATGCCTCAGACCTCAGTCAGAGTCCAGAGCTGGG...GGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR GCA 90 bp GAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCTGGACGACCCAAGGCCTaGTGCCCCTTTAGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: EWQVRQARVWSPWLWRLPGRPKA*CPFSQL
Trigger: TAACTGGCTAAAGGGGCAGCAGGCCTTGGGTCGTCC...AGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp AGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGGGGTCCGCCGTGGGTGGCCTCTaGGGTCCTGAAGTACCAAGA +
Preference number: 2 (lower is better)
Translates to: RSDGILSPLYGRGWPLGSAVGGL*GPEVPR
Trigger: TCTTGGTACTTCAGGACCCCAGAGGCCACCCACGGC...GGACCCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp AGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGGGGTCCAGGGGGCAGAAGCAGTaGCAGGGGAGAAGATCTGGG +
Preference number: 2 (lower is better)
Translates to: RSDGILSPLYGRGWPLGSRGQKQ*QGRRSG
Trigger: CCCAGATCTTCTCCCCTGCCACTGCTTCTGCCCCCT...GGACCCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp GAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGCCCACACTCTACCCTGCTaGAGCTGGGCCATAGGCTGG +
Preference number: 2 (lower is better)
Translates to: ENPGWASGTKATKEAELAHTLPC*SWAIGW
Trigger: CCAGCCTATGGCCCAGCTTCAGCAGGGTAGAGTGTG...GGCCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp GCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGAAAGACGGCTTGGGGTaGGGCTGTGCAGCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: AGMREWQVRQARVWSPWLKDGLG*GCAAPA
Trigger: AGCAGGGGCTGCACAGCCTCACCCCAAGCCGTCTTT...CAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp GTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGGTGGGCCCTGCTACCTaGAGCCAGGCCAGAATGTAC +
Preference number: 2 (lower is better)
Translates to: VPENPGWASGTKATKEAEVGPAT*SQARMY
Trigger: GTACATTCTGGCCTGGCTTCAGGTAGCAGGGCCCAC...CTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR GCA 90 bp GCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGCTTGGGGTGAGGCTGTaGAGCCCCTGCTCACAGTGC +
Preference number: 2 (lower is better)
Translates to: AGMREWQVRQARVWSPWLLGVRL*SPCSQC
Trigger: GCACTGTGAGCAGGGGCTGCACAGCCTCACCCCAAG...CAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp CCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGGCCGTGGGTGGCCTCTaGGGTCCTGAAGTACCAAGA +
Preference number: 2 (lower is better)
Translates to: PRIRGGHQERRQRKRLSWAVGGL*GPEVPR
Trigger: TCTTGGTACTTCAGGACCCCAGAGGCCACCCACGGC...CCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp AATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGCGAAAGAGGCTGAGCTaGCCCCCACACTCTACCCTG +
Preference number: 2 (lower is better)
Translates to: NERMAGETGSGVVSVVVARKRLS*PPHSTL
Trigger: CAGGGTAGAGTGTGGGGGCCAGCTCAGCCTCTTTCG...CGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp AGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGGGGTCCCTGGAATTTGCCAGCTaGCTACCCAGAGAACCCCTG +
Preference number: 2 (lower is better)
Translates to: RSDGILSPLYGRGWPLGSLEFAS*LPREPL
Trigger: CAGGGGTTCTCTGGGTAGCCAGCTGGCAAATTCCAG...GGACCCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp AATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGCCCAGCTCTGGACTCTaGCTGAGGTCTGAGGCATGT +
Preference number: 2 (lower is better)
Translates to: NERMAGETGSGVVSVVVAPSSGL*LRSEAC
Trigger: ACATGCCTCAGACCTCAGTCAGAGTCCAGAGCTGGG...CGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp AGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGGGGTCCATGACAGGGTTGATCTaGAGAACAGGGAGAGCCTCC +
Preference number: 2 (lower is better)
Translates to: RSDGILSPLYGRGWPLGSMTGLI*RTGRAS
Trigger: GGAGGCTCTCCCTGTTCTTCAGATCAACCCTGTCAT...GGACCCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR GCA 90 bp AATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGCGACCCAAGGCCTGCTaGCCCTTTAGCCAGTTATGC +
Preference number: 2 (lower is better)
Translates to: NERMAGETGSGVVSVVVARPKAC*PFSQLC
Trigger: GCATAACTGGCTAAAGGGGCAGCAGGCCTTGGGTCG...CGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp AATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCCCTTGTATGGCCGTaGGTGGCCTCTGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: NVHAGMREWQVRQARVWSPLVWP*VASGVL
Trigger: CAGGACCCCAGAGGCCACCCACGGCCATACAAGGGG...AGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp AAATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCCCTGAGCCCCTTGTATaGCCGTGGGTGGCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: KCPCWNERMAGETGSGVVPEPLV*PWVASG
Trigger: CCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGG...GACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp AAATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCAAAGACGGCTTGGGGTaGGGCTGTGCAGCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: KCPCWNERMAGETGSGVVKDGLG*GCAAPA
Trigger: AGCAGGGGCTGCACAGCCTCACCCCAAGCCGTCTTT...GACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR GCA 90 bp TGGCCCCCACACTCTACCCTGCTGAAGCTGGGCCATAGGCTGGTTTTTATAAAAGAGGCATGTGGCCTCTaGCTGGCGTCACCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: WPPHSTLLKLGHRLVFIKEACGL*LASPPW
Trigger: CCAGGGAGGTGACGCCAGGCAGAGGCCACATGCCTC...TTTTATAAAAACCAGCCTATGGCCCAGCTTCAGCAGGGTAGAGTGTGGGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR GCA 90 bp AATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTAGCCCCTGCTCACAGTaGTGTCCCCGAGAATCCGGG +
Preference number: 2 (lower is better)
Translates to: NVHAGMREWQVRQARVWSSPCSQ*CPRESG
Trigger: CCCGGATTCTCGGGGACAGCACTGTGAGCAGGGGCT...AGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp GAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCTGAAGTACCAAGATaGCTGTCTCCCCTCTTTGCA +
Preference number: 2 (lower is better)
Translates to: ERMAGETGSGVVSVVVAAPEVPR*LSPLFA
Trigger: TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGG...AGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp AGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGGGGTCCCCTGAAGTACCAAGATaGCTGTCTCCCCTCTTTGCA +
Preference number: 2 (lower is better)
Translates to: RSDGILSPLYGRGWPLGSPEVPR*LSPLFA
Trigger: TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGG...GGACCCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR CAA 90 bp CTGAGCTTCAGAGGCAGGTCGACTGAGAAGAGGTCTGAGGGGACATaGGGCTGGTGGATGTCTATGGCAGCTGTAGTGACCACACATACT +
Preference number: 2 (lower is better)
Translates to: LSFRGRSTEKRSEGT*GWWMSMAAVVTTHT
Trigger: AGTATGTGTGGTCACTACAGCTGCCATAGACATCCACCAGCCCAATGTCCCCTCAGACCTCTTCTCAGTCGACCTGCCTCTGAAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CAA 90 bp CAGTGGAAGCACTTCTCAGCTAGTGCTTTGGCCTCGAGGTCCACCTaGTACTCAGTGAGGACTGCTGGTTTCTGGGTGGTAGAAATGGTC +
Preference number: 2 (lower is better)
Translates to: QWKHFSASALASRST*YSVRTAGFWVVEMV
Trigger: GACCATTTCTACCACCCAGAAACCAGCAGTCCTCACTGAGTACAAGGTGGACCTCGAGGCCAAAGCACTAGCTGAGAAGTGCTTCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR GCA 90 bp CTCGAGGTCCACCTTGTACTCAGTGAGGACTGCTGGTTTCTGGGTGGTAGAAATTATAATGGTGGGCCCTaGTACCTGAAGCCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LEVHLVLSEDCWFLGGRNYNGGP*YLKPGQ
Trigger: CTGGCCTGGCTTCAGGTAGCAGGGCCCACCATTATA...ATTTCTACCACCCAGAAACCAGCAGTCCTCACTGAGTACAAGGTGGACCTCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp TTAGTGGTAGTGGTAGTAGTTGATGTGTGCATGCTCATGAGTATGGGAGCACCTCACACTCTACCCTGCTaGAGCTGGGCCATAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LVVVVVVDVCMLMSMGAPHTLPC*SWAIGW
Trigger: CCAGCCTATGGCCCAGCTTCAGCAGGGTAGAGTGTG...AGGTGCTCCCATACTCATGAGCATGCACACATCAACTACTACCACTACCACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp CCTGAGTTCCACCTTGCCACACTCTTGGGAGTTTTAAATGGGCTGGAGGAGTGTCTGTTTTCTGAAGACTaGCTGCCCTCAGGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: PEFHLATLLGVLNGLEECLFSED*LPSGLS
Trigger: TGAGAGCCCTGAGGGCAGTCAGTCTTCAGAAAACAG...ACACTCCTCCAGCCCATTTAAAACTCCCAAGAGTGTGGCAAGGTGGAACTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp AGGTCCACCTTGTACTCAGTGAGGACTGCTGGTTTCTGGGTGGTAGAAATGGTCGAGTGGTCTGTTTTCTaGAGACTGACTGCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: RSTLYSVRTAGFWVVEMVEWSVF*RLTALR
Trigger: CCTGAGGGCAGTCAGTCTTCAGAAAACAGACCACTC...GACCATTTCTACCACCCAGAAACCAGCAGTCCTCACTGAGTACAAGGTGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp CTAGGCCTCAGGAACTGTATGCAACTTTGGCTCTTTGGATTCCAAAGATCTGAAAGCACCACCCTCTCCTaGGTAGGGCAAAAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LGLRNCMQLWLFGFQRSESTTLS*VGQKEA
Trigger: GGCCTCCTTTTGCCCTACTCAGGAGAGGGTGGTGCT...TTCAGATCTTTGGAATCCAAAGAGCCAAAGTTGCATACAGTTCCTGAGGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp CTAGGCCTCAGGAACTGTATGCAACTTTGGCTCTTTGGATTCCAAAGATCTGAAGAGCCACAGGTAGAGTaGGAGGTGGTCTCCGAGGTG +
Preference number: 2 (lower is better)
Translates to: LGLRNCMQLWLFGFQRSEEPQVE*EVVSEV
Trigger: CACCTCGGAGACCACCTCCCACTCTACCTGTGGCTC...TTCAGATCTTTGGAATCCAAAGAGCCAAAGTTGCATACAGTTCCTGAGGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp CTCGAGGTCCACCTTGTACTCAGTGAGGACTGCTGGTTTCTGGGTGGTAGAAATATCTCTCCTAGAGACTaGAATTTGCCAGCTGGCTAC +
Preference number: 2 (lower is better)
Translates to: LEVHLVLSEDCWFLGGRNISPRD*NLPAGY
Trigger: GTAGCCAGCTGGCAAATTCCAGTCTCTAGGAGAGAT...ATTTCTACCACCCAGAAACCAGCAGTCCTCACTGAGTACAAGGTGGACCTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR GCA 90 bp CAACAAGCCAGTAGGCTCTCTAGGCCTCAGGAACTGTATGCAACTTTGGCTCTTTTTAACCCTGAGCTCTaGCATCACAGTCTACAGGCT +
Preference number: 2 (lower is better)
Translates to: QQASRLSRPQELYATLALFNPEL*HHSLQA
Trigger: AGCCTGTAGACTGTGATGGCAGAGCTCAGGGTTAAA...AAGAGCCAAAGTTGCATACAGTTCCTGAGGCCTAGAGAGCCTACTGGCTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp CAACAAGCCAGTAGGCTCTCTAGGCCTCAGGAACTGTATGCAACTTTGGCTCTTCCTGCTTTTGCCTCCTaGGTGTTGAAATTAAAGGTG +
Preference number: 2 (lower is better)
Translates to: QQASRLSRPQELYATLALPAFAS*VLKLKV
Trigger: CACCTTTAATTTCAACACTCAGGAGGCAAAAGCAGG...AAGAGCCAAAGTTGCATACAGTTCCTGAGGCCTAGAGAGCCTACTGGCTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp AAGGGTGAGAGCTGGAGAACCAGCAGTTTAGATGAGGACAAGGGAAAGGAGAAAAGATCCATCCCCTCATaGCCTGTGAAGACTTGGAAA +
Preference number: 2 (lower is better)
Translates to: KGESWRTSSLDEDKGKEKRSIPS*PVKTWK
Trigger: TTTCCAAGTCTTCACAGGCCATGAGGGGATGGATCT...TTTCTCCTTTCCCTTGTCCTCATCTAAACTGCTGGTTCTCCAGCTCTCACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp TTAGTGGTAGTGGTAGTAGTTGATGTGTGCATGCTCATGAGTATGGGAGCACCTTGGCCTGTGAAGACTTaGAAATGTCCATGCTGGAAT +
Preference number: 2 (lower is better)
Translates to: LVVVVVVDVCMLMSMGAPWPVKT*KCPCWN
Trigger: ATTCCAGCATGGACATTTCCAAGTCTTCACAGGCCA...AGGTGCTCCCATACTCATGAGCATGCACACATCAACTACTACCACTACCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR TCA 90 bp CTAGGCCTCAGGAACTGTATGCAACTTTGGCTCTTTGGATTCCAAAGATCTGAAAACCAGCAGTTTAGATaGGGACAAGGGAAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: LGLRNCMQLWLFGFQRSENQQFR*GQGKGE
Trigger: TTCTCCTTTCCCTTGTCCTCATCTAAACTGCTGGTT...TTCAGATCTTTGGAATCCAAAGAGCCAAAGTTGCATACAGTTCCTGAGGCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR-3UTR CCA 90 bp TTAGTGGTAGTGGTAGTAGTTGATGTGTGCATGCTCATGAGTATGGGAGCACCTCAAGGTTTGAAACTTTaGCTACTGAAAACCAGTATG +
Preference number: 2 (lower is better)
Translates to: LVVVVVVDVCMLMSMGAPQGLKL*LLKTSM
Trigger: CATACTGGTTTTCAGTAGCCAAAGTTTCAAACCTTG...AGGTGCTCCCATACTCATGAGCATGCACACATCAACTACTACCACTACCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CAA 90 bp GGAGAGTGCAAGAATTTCAAGGACTGTAAAATCCAAACTCAAGGTTaGAAACTTTGGCTACTGAAAACCAGTATGATAACAGGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: GECKNFKDCKIQTQG*KLWLLKTSMITGLG
Trigger: ACCCAGACCTGTTATCATACTGGTTTTCAGTAGCCAAAGTTTCAAACCTTGAGTTTGGATTTTACAGTCCTTGAAATTCTTGCACTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp GCACTCTGGGCCCTGGTGACTGAGCCACAGGTAGAGTaGGAGGTGGTCTCCGAGGTGGCGCTGGCGCAGGTG +
Preference number: 3 (lower is better)
Translates to: ALWALVTEPQVE*EVVSEVALAQV
Trigger: CACCTGCGCCAGCGCCACCTCGGAGACCACCTCCCACTCTACCTGTGGCTCAGTCACCAGGGCCCAGAGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp TCCCTGGAGGCAGACAGCACCCTGTGGGAGATCAGATaGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: SLEADSTLWEIR*DPEPLVWPWVA
Trigger: GGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAGGGTGCTGTCTGCCTCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR-3UTR CAA 90 bp AGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGGGGTCCCTGGCGCAGGTGCTGTaGCCACTGAGCTTCAGAGGC +
Preference number: 3 (lower is better)
Translates to: RSDGILSPLYGRGWPLGSLAQVL*PLSFRG
Trigger: GCCTCTGAAGCTCAGTGGCAACAGCACCTGCGCCAG...GGACCCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 72 bp CTGAGTAGGGCAAAAGGAGGCCCCAGCTCTGGACTCTaGCTGAGGTCTGAGGCATGTGGCCTCTGCCTGGCG +
Preference number: 3 (lower is better)
Translates to: LSRAKGGPSSGL*LRSEACGLCLA
Trigger: CGCCAGGCAGAGGCCACATGCCTCAGACCTCAGTCAGAGTCCAGAGCTGGGGCCTCCTTTTGCCCTACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR TCA 72 bp TCTCCGAGGTGGCGCTGGCGCAGGTGCTGTTGCCACTaGGCTTCAGAGGCAGGTCGACTGAGAAGAGGTCTG +
Preference number: 3 (lower is better)
Translates to: SPRWRWRRCCCH*ASEAGRLRRGL
Trigger: CAGACCTCTTCTCAGTCGACCTGCCTCTGAAGCTCAGTGGCAACAGCACCTGCGCCAGCGCCACCTCGGAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp CAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTaGCGGCTCCCTCAGCATTTCTGGAAAGACGGCTTG +
Preference number: 3 (lower is better)
Translates to: QVRQARVWSPWL*RLPQHFWKDGL
Trigger: CAAGCCGTCTTTCCAGAAATGCTGAGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR CCA 72 bp GGTCCTTTGACAGAGAGGACATCAGGTCCTGGACTGTaGCCTCTGCCACCAGCTGCTGAGGGGGCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: GPLTERTSGPGL*PLPPAAEGAEA
Trigger: TGCTTCTGCCCCCTCAGCAGCTGGTGGCAGAGGCCACAGTCCAGGACCTGATGTCCTCTCTGTCAAAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 72 bp CCCTCAGGGCTCTCAGCGCATAGCAGCTCTTTTCTCTaGGAGGCAGTGGGGCTGATGGTAGAGTACGCTGGC +
Preference number: 3 (lower is better)
Translates to: PSGLSAHSSSFL*EAVGLMVEYAG
Trigger: GCCAGCGTACTCTACCATCAGCCCCACTGCCTCTCAGAGAAAAGAGCTGCTATGCGCTGAGAGCCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 72 bp TGGGTCCAAGGCCTTATGGGATGGGCAGGGGTCCTTTaGCAGAGAGGACATCAGGTCCTGGACTGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: WVQGLMGWAGVL*QRGHQVLDCGL
Trigger: GAGGCCACAGTCCAGGACCTGATGTCCTCTCTGTCAAAGGACCCCTGCCCATCCCATAAGGCCTTGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp GAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTaGTTGTGGCGGCTCCCTCAGCATTTCTGGAAAGAC +
Preference number: 3 (lower is better)
Translates to: EWQVRQARVWSP*LWRLPQHFWKD
Trigger: GTCTTTCCAGAAATGCTGAGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR CCA 72 bp GGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTaGTCTCCGTGGTTGTGGCGGCTCCCTCAGCATTTC +
Preference number: 3 (lower is better)
Translates to: GMREWQVRQARV*SPWLWRLPQHF
Trigger: GAAATGCTGAGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR GCA 72 bp GCCTCCTGGTTCTTCTGGTTGAACAGACTCACCCTATaGTCCAGCTCAGGGCTGGTCTGGACTGAGCCCAGT +
Preference number: 3 (lower is better)
Translates to: ASWFFWLNRLTL*SSSGLVWTEPS
Trigger: ACTGGGCTCAGTCCAGACCAGCCCTGAGCTGGAGCATAGGGTGAGTCTGTTCAACCAGAAGAACCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp GCCGTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATaGCTGTCTCCCCTCTTTGCACTCAACAAGCCAGTA +
Preference number: 3 (lower is better)
Translates to: AVGGLWGPEVPR*LSPLFALNKPV
Trigger: TACTGGCTTGTTGAGTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR CCA 72 bp GGCCTCGAGGTCCACCTTGTACTCAGTGAGGACTGCTaGTTTCTGGGTGGTAGAAATGGTCTGGGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: GLEVHLVLSEDC*FLGGRNGLGGE
Trigger: CTCTCCTCCCAGACCATTTCTACCACCCAGAAACCAGCAGTCCTCACTGAGTACAAGGTGGACCTCGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 72 bp GGGAGCACCTGCCCATATGTGAGTGGGGCCAGGGGTTaGGTTGAGACAGGATCTCTCCTAGAGACTGGAATT +
Preference number: 3 (lower is better)
Translates to: GSTCPYVSGARG*VETGSLLETGI
Trigger: AATTCCAGTCTCTAGGAGAGATCCTGTCTCAACTCAACCCCTGGCCCCACTCACATATGGGCAGGTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 72 bp TCTGAAGAACAGGGAGAGCCTCCTGGTTCTTCTGGTTaGACAGACTCACCCTATGCTCCAGCTCAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: SEEQGEPPGSSG*TDSPYAPAQGW
Trigger: CCAGCCCTGAGCTGGAGCATAGGGTGAGTCTGTTCAACCAGAAGAACCAGGAGGCTCTCCCTGTTCTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp TCCCATCCCCCTCCCGCTTCCAGATCCATCCCCTCATaGCCTGTGAAGACTTGGAAATGTCCATGCTGGAAT +
Preference number: 3 (lower is better)
Translates to: SHPPPASRSIPS*PVKTWKCPCWN
Trigger: ATTCCAGCATGGACATTTCCAAGTCTTCACAGGCCATGAGGGGATGGATCTGGAAGCGGGAGGGGGATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR GCA 72 bp TTTGGCCTCGAGGTCCACCTTGTACTCAGTGAGGACTaGTGGTTTCTGGGTGGTAGAAATGGTCTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: FGLEVHLVLSED*WFLGGRNGLGG
Trigger: TCCTCCCAGACCATTTCTACCACCCAGAAACCAGCAGTCCTCACTGAGTACAAGGTGGACCTCGAGGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp CCCTCATGGCCTGTGAAGACTTGGAAATGTCCATGCTaGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGT +
Preference number: 3 (lower is better)
Translates to: PSWPVKTWKCPC*NERMAGETGSG
Trigger: ACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATTTCCAAGTCTTCACAGGCCATGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR CCA 72 bp CTTATAGGCTCCCCACTCAACTCTCACAGTCAGAGATaGATCAGGATGTTCTGGCCATGGCAGCTGCAGGGT +
Preference number: 3 (lower is better)
Translates to: LIGSPLNSHSQR*IRMFWPWQLQG
Trigger: ACCCTGCAGCTGCCATGGCCAGAACATCCTGATCCATCTCTGACTGTGAGAGTTGAGTGGGGAGCCTATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp GGACCCACAACACTTCCCGATAGAAGTGCTTCTCAGTaGAAGCACTTCTCAGCTAGTGCTTTGGCCTCGAGG +
Preference number: 3 (lower is better)
Translates to: GPTTLPDRSASQ*KHFSASALASR
Trigger: CCTCGAGGCCAAAGCACTAGCTGAGAAGTGCTTCCACTGAGAAGCACTTCTATCGGGAAGTGTTGTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp AGGTCGACTGAGAAGAGGTCTGAGGGGACATTGGGCTaGTGGATGTCTATGGCAGCTGTAGTGACCACACAT +
Preference number: 3 (lower is better)
Translates to: RSTEKRSEGTLG*WMSMAAVVTTH
Trigger: ATGTGTGGTCACTACAGCTGCCATAGACATCCACCAGCCCAATGTCCCCTCAGACCTCTTCTCAGTCGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR GCA 72 bp GACCAACCTAGTCCATCCCAATCAACCCAGAAAGCTTaGCCCAGGAGAATGGATTGGGGTTCTCTTGAGGAG +
Preference number: 3 (lower is better)
Translates to: DQPSPSQSTQKA*PRRMDWGSLEE
Trigger: CTCCTCAAGAGAACCCCAATCCATTCTCCTGGGGCAAGCTTTCTGGGTTGATTGGGATGGACTAGGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 72 bp GACTGGAATTTGCCAGCTGGCTACCCAGAGAACCCCTaGGTTCCACCTTGCCACACTCTTGGGAGTTTTAAA +
Preference number: 3 (lower is better)
Translates to: DWNLPAGYPENP*VPPCHTLGSFK
Trigger: TTTAAAACTCCCAAGAGTGTGGCAAGGTGGAACTCAGGGGTTCTCTGGGTAGCCAGCTGGCAAATTCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp GCTTCCAGATCCATCCCCTCATGGCCTGTGAAGACTTaGAAATGTCCATGCTGGAATGAGAGAATGGCAGGT +
Preference number: 3 (lower is better)
Translates to: ASRSIPSWPVKT*KCPCWNERMAG
Trigger: ACCTGCCATTCTCTCATTCCAGCATGGACATTTCCAAGTCTTCACAGGCCATGAGGGGATGGATCTGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
3UTR GCA 72 bp TGCCATCACAGTCTACAGGCTTATAATGGTGGGCCCTaGTACCTGAAGCCAGGCCAGAATGTACCTATCTTT +
Preference number: 3 (lower is better)
Translates to: CHHSLQAYNGGP*YLKPGQNVPIF
Trigger: AAAGATAGGTACATTCTGGCCTGGCTTCAGGTAGCAGGGCCCACCATTATAAGCCTGTAGACTGTGATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR GCA 72 bp TTTGCCCCACTAAGAAAGGTTATATTGATCACACTTTaGCTCCGTCACTTTGAAGGCCAGAGAGGTGCCGGC +
Preference number: 3 (lower is better)
Translates to: FAPLRKVILITL*LRHFEGQRGAG
Trigger: GCCGGCACCTCTCTGGCCTTCAAAGTGACGGAGGCAAAGTGTGATCAATATAACCTTTCTTAGTGGGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR GCA 72 bp AGGGAAATGTTGCCAGTTCCCCTCGGTGAACTGAAGTaGAGACATGTGACATTCTTTTACCAGTCACCCATG +
Preference number: 3 (lower is better)
Translates to: REMLPVPLGELK*RHVTFFYQSPM
Trigger: CATGGGTGACTGGTAAAAGAATGTCACATGTCTGCACTTCAGTTCACCGAGGGGAACTGGCAACATTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR TCA 72 bp GAGGAGAGCCTCACATGTGGGCCTTTTAAGCCAAGATaGAGAAATATCTTCACAATAGACCAACCTAGTCCA +
Preference number: 3 (lower is better)
Translates to: EESLTCGPFKPR*RNIFTIDQPSP
Trigger: TGGACTAGGTTGGTCTATTGTGAAGATATTTCTTCATCTTGGCTTAAAAGGCCCACATGTGAGGCTCTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR GCA 72 bp TGCTTTTGCCTCCTGAGTGTTGAAATTAAAGGTGTTTaGCCCACTAAGAAAGGTTATATTGATCACACTTTG +
Preference number: 3 (lower is better)
Translates to: CFCLLSVEIKGV*PTKKGYIDHTL
Trigger: CAAAGTGTGATCAATATAACCTTTCTTAGTGGGGCAAACACCTTTAATTTCAACACTCAGGAGGCAAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CCA 72 bp AAGGACTGTAAAATCCAAACTCAAGGTTTGAAACTTTaGCTACTGAAAACCAGTATGATAACAGGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: KDCKIQTQGLKL*LLKTSMITGLG
Trigger: ACCCAGACCTGTTATCATACTGGTTTTCAGTAGCCAAAGTTTCAAACCTTGAGTTTGGATTTTACAGTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp GACAGCACCCTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGAGCACGTGTGGGGCCTaGAGCGCCGCCTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: DSTLWEIRWDPEPLVWPWSTCGA*SAASRS
Trigger: CGAGCGGGAGGCGGCGCTGCAGGCCCCACACGTGCT...CCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAGGGTGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp CTGTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGCCCAGTGGGGTAGGCTaGGCCAGGGGTGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSPRIRGGHQERRQRKRLPSGVG*ARGAGS
Trigger: GGACCCAGCACCCCTGGCCCAGCCTACCCCACTGGG...CAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp GAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCTTCAGGTCCTGGACTGTaGCCTCTGCCACCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EWQVRQARVWSPWLWRLPSGPGL*PLPPAA
Trigger: AGCAGCTGGTGGCAGAGGCCACAGTCCAGGACCTGA...AGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR GCA 90 bp AATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGTCCTGCTGTGCCAGGTaGGCACGCAGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: NERMAGETGSGVVSVVVASCCAR*ARSCRI
Trigger: GATCCGGCAGCTGCGTGCGCACCTGGCACAGCAGGA...CGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp GCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGGCCAGATCCAGGTCCTaGTGTGCCAGGTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: AGMREWQVRQARVWSPWLARSRS*CARCAR
Trigger: GCGTGCGCACCTGGCACAGCAGGACCTGGATCTGGC...CAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp GTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTTGTAGCGGCTGCGTaGCTGGCTGAGCACGTGTGG +
Preference number: 4 (lower is better)
Translates to: VPENPGWASGTKATKEAELVAAA*LAEHVW
Trigger: CCACACGTGCTCAGCCAGCCACGCAGCCGCTACAAG...CTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp GCCTCTGCCTGGCGTCACCTCCCTGGAGGCAGACAGCACCCTGTGGGAGATCAGGACCACACATACTGCTaGTTCTGGGGCTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: ASAWRHLPGGRQHPVGDQDHTYC*FWGSTV
Trigger: GACAGTGGAGCCCCAGAACCAGCAGTATGTGTGGTC...CTGATCTCCCACAGGGTGCTGTCTGCCTCCAGGGAGGTGACGCCAGGCAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp GACAGCACCCTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGTGGCTGCTGGCACTCTaGGCCCTGGTGACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: DSTLWEIRWDPEPLVWPWWLLAL*ALVTEP
Trigger: TGGCTCAGTCACCAGGGCCCAGAGTGCCAGCAGCCA...CCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAGGGTGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
3UTR CAA 72 bp TGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTaGTGGCGGCTCCCTCAGCATTTCTGGAAAGACGGC +
Preference number: 4 (lower is better)
Translates to: WQVRQARVWSPW*WRLPQHFWKDG
Trigger: GCCGTCTTTCCAGAAATGCTGAGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp GAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTTACCTGCCATACGGCTaGTCTCTTCCCACAGCACGG +
Preference number: 4 (lower is better)
Translates to: ERMAGETGSGVVSVVVAAYLPYG*SLPTAR
Trigger: CCGTGCTGTGGGAAGAGAGCAGCCGTATGGCAGGTA...AGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp CCCTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTTACCTGCCATACGGCTaGTCTCTTCCCACAGCACGG +
Preference number: 4 (lower is better)
Translates to: PCGRSDGILSPLYGRGWPYLPYG*SLPTAR
Trigger: CCGTGCTGTGGGAAGAGAGCAGCCGTATGGCAGGTA...AGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp CCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGAGGTGCGCACGCAGCTaGCGGATCTCAAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: PRIRGGHQERRQRKRLSWRCARS*RISNPC
Trigger: GCAAGGGTTTGAGATCCGGCAGCTGCGTGCGCACCT...CCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp TGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACATCCAGGTCCTGCTGTaGCAGGTGCGCACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WVASGVLKYQDGCLPSLHIQVLL*QVRTQL
Trigger: CAGCTGCGTGCGCACCTGGCACAGCAGGACCTGGAT...GTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp GCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACTCAACACGCCTCCCGCTCGGCTaGCAGATCCAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASGVLKYQDGCLPSLHSTRLPLG*QIQVLL
Trigger: CAGCAGGACCTGGATCTGGCAGCCGAGCGGGAGGCG...TGTTGAGTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp AATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCTGGCTGAGCACGTGTaGGGCCTGCAGCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: NVHAGMREWQVRQARVWSLAEHV*GLQRRL
Trigger: GAGGCGGCGCTGCAGGCCCCACACGTGCTCAGCCAG...AGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp AACCCTGAGCTCTGCCATCACAGTCTACAGGCTTATAATGGTGGGCCCTGCTACCTGGCTGAGCACGTGTaGGGCCTGCAGCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: NPELCHHSLQAYNGGPCYLAEHV*GLQRRL
Trigger: GAGGCGGCGCTGCAGGCCCCACACGTGCTCAGCCAG...GTAGCAGGGCCCACCATTATAAGCCTGTAGACTGTGATGGCAGAGCTCAGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp GCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGAGCCCCGCTGTGGGCTaGAAGTGGATGACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: AGMREWQVRQARVWSPWLSPAVG*KWMTGL
Trigger: CAACCCTGTCATCCACTTGCAGCCCACAGCGGGGCT...CAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp AGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCCATCTTGGATGGCCTTaGCCTTCTCATACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RMAGETGSGVVSVVVAAPHLGWP*PSHTAG
Trigger: CCCAGCAGTATGAGAAGGCCAAGGCCATCCAAGATG...GGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp TGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACGAGCCACAGGTAGAGTaGGAGGTGGTCTCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: WVASGVLKYQDGCLPSLHEPQVE*EVVSEV
Trigger: CACCTCGGAGACCACCTCCCACTCTACCTGTGGCTC...GTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp GTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCAGAGGACATCAGGTCCTaGACTGTGGCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: VGGLWGPEVPRWLSPLFAEDIRS*TVASAT
Trigger: GGTGGCAGAGGCCACAGTCCAGGACCTGATGTCCTC...TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR TCA 90 bp GAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCTACCAGACTGATCCAGTaGATGACACCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: EWQVRQARVWSPWLWRLPTRLIQ*MTPANW
Trigger: CCAGTTTGCTGGTGTCATTCACTGGATCAGTCTGGT...AGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp CTGTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGTTCACTGTGGCTTCTTaGGAGGGCCTCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LSPRIRGGHQERRQRKRLFTVAS*EGLSSS
Trigger: GGAAGAGCTGAGGCCCTCTCAAGAAGCCACAGTGAA...CAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp GTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCATGGGCAGGGGTCCTTTaGCAGAGAGGACATCAGGTC +
Preference number: 4 (lower is better)
Translates to: VGGLWGPEVPRWLSPLFAWAGVL*QRGHQV
Trigger: GACCTGATGTCCTCTCTGTCAAAGGACCCCTGCCCA...TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR TCA 90 bp CCCTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTTGGATTCCAAAGATCTaGACTTCTCCTCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PCGRSDGILSPLYGRGWPWIPKI*TSPPAP
Trigger: CGGGGCTGGAGGAGAAGTTCAGATCTTTGGAATCCA...AGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR GCA 90 bp TCAGAGATGGATCAGGATGTTCTGGCCATGGCAGCTGCAGGGTGTCAGGGTTTCATCCAGGTCCTGCTGTaGCAGGTGCGCACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SEMDQDVLAMAAAGCQGFIQVLL*QVRTQL
Trigger: CAGCTGCGTGCGCACCTGGCACAGCAGGACCTGGAT...GAAACCCTGACACCCTGCAGCTGCCATGGCCAGAACATCCTGATCCATCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp AGTGGAAGCACTTCTCAGCTAGTGCTTTGGCCTCGAGGTCCACCTTGTACTCAGGCCAGATCCAGGTCCTaGTGTGCCAGGTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: SGSTSQLVLWPRGPPCTQARSRS*CARCAR
Trigger: GCGTGCGCACCTGGCACAGCAGGACCTGGATCTGGC...CTGAGTACAAGGTGGACCTCGAGGCCAAAGCACTAGCTGAGAAGTGCTTCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp TTGGGAGTTTTAAATGGGCTGGAGGAGTGTGGTATGTGTCCTGAGTGGTCTGTTAGCACGTGTGGGGCCTaGAGCGCCGCCTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: LGVLNGLEECGMCPEWSVSTCGA*SAASRS
Trigger: CGAGCGGGAGGCGGCGCTGCAGGCCCCACACGTGCT...AACAGACCACTCAGGACACATACCACACTCCTCCAGCCCATTTAAAACTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp TGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACGGGTCCAAGGCCTTATaGGATGGGCAGGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: WVASGVLKYQDGCLPSLHGSKAL*DGQGSF
Trigger: AAAGGACCCCTGCCCATCCCATAAGGCCTTGGACCC...GTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR TCA 90 bp GTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGATGACAGGGTTGATCTaGAGAACAGGGAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VPENPGWASGTKATKEAEMTGLI*RTGRAS
Trigger: GGAGGCTCTCCCTGTTCTTCAGATCAACCCTGTCAT...CTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR GCA 90 bp TGGCCCCCACACTCTACCCTGCTGAAGCTGGGCCATAGGCTGGTTTTTATAAAATCCTGCTGTGCCAGGTaGGCACGCAGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: WPPHSTLLKLGHRLVFIKSCCAR*ARSCRI
Trigger: GATCCGGCAGCTGCGTGCGCACCTGGCACAGCAGGA...TTTTATAAAAACCAGCCTATGGCCCAGCTTCAGCAGGGTAGAGTGTGGGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp GTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCATCAGCTCTTCCACGATaGTCTCGGCTGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGGLWGPEVPRWLSPLFASALPR*SRLLSP
Trigger: AGGAGACAGCAGCCGAGAGCATCGTGGAAGAGCTGA...TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp AGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGGGGTCCCAAGTGTCCTGGGGCTaGATAGTGCATGCAAACAGT +
Preference number: 4 (lower is better)
Translates to: RSDGILSPLYGRGWPLGSQVSWG*IVHANS
Trigger: ACTGTTTGCATGCACTATGCAGCCCCAGGACACTTG...GGACCCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp CTGTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGGCCTTCTCATACTGCTaGGTGACCATCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LSPRIRGGHQERRQRKRLAFSYC*VTISIS
Trigger: GGAGATGGAGATGGTCACCCAGCAGTATGAGAAGGC...CAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp AGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCTGTCATCTTTCACTGTaGCTTCTTGAGAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RMAGETGSGVVSVVVAAPCHLSL*LLERAS
Trigger: TGAGGCCCTCTCAAGAAGCCACAGTGAAAGATGACA...GGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp AGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCGAAGCTTTGTATCTATaGGAAGCTCCAGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: RMAGETGSGVVSVVVAAPEALYL*EAPESG
Trigger: TCCTGACTCTGGAGCTTCTCATAGATACAAAGCTTC...GGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp CTGTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGACCAGACTGATCCAGTaGATGACACCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: LSPRIRGGHQERRQRKRLTRLIQ*MTPANW
Trigger: CCAGTTTGCTGGTGTCATTCACTGGATCAGTCTGGT...CAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp CCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGTCTCCATCTCCAACTTaGCTGGCAGGACATAGGCAT +
Preference number: 4 (lower is better)
Translates to: PRIRGGHQERRQRKRLSWSPSPT*LAGHRH
Trigger: ATGCCTATGTCCTGCCAGTCAAGTTGGAGATGGAGA...CCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp GAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTTCAAACCCTTGCTCCTaGCAGATTTGCGTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ERMAGETGSGVVSVVVAASNPCS*QICVSL
Trigger: AAGACTGACGCAAATCTGTCAGGAGCAAGGGTTTGA...AGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp TTGGGAGTTTTAAATGGGCTGGAGGAGTGTGGTATGTGTCCTGAGTGGTCTGTTCGCCTCCCGCTCGGCTaGCAGATCCAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGVLNGLEECGMCPEWSVRLPLG*QIQVLL
Trigger: CAGCAGGACCTGGATCTGGCAGCCGAGCGGGAGGCG...AACAGACCACTCAGGACACATACCACACTCCTCCAGCCCATTTAAAACTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp AATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCCTTCTCATACTGCTaGGTGACCATCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: NERMAGETGSGVVSVVVAAFSYC*VTISIS
Trigger: GGAGATGGAGATGGTCACCCAGCAGTATGAGAAGGC...CGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp GCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGACATACTGCTGGTTCTaGGGCTCCACTGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: AGMREWQVRQARVWSPWLTYCWF*GSTVTA
Trigger: AGCAGTGACAGTGGAGCCCCAGAACCAGCAGTATGT...CAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp TGGCCCCCACACTCTACCCTGCTGAAGCTGGGCCATAGGCTGGTTTTTATAAAAGAGGAACCCAGTGTCTaGCTGCTGGCACTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WPPHSTLLKLGHRLVFIKEEPSV*LLALWA
Trigger: GGCCCAGAGTGCCAGCAGCCAGACACTGGGTTCCTC...TTTTATAAAAACCAGCCTATGGCCCAGCTTCAGCAGGGTAGAGTGTGGGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp AATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTAGGGGGCAGAAGCAGTaGCAGGGGAGAAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: NVHAGMREWQVRQARVWSRGQKQ*QGRRSG
Trigger: CCCAGATCTTCTCCCCTGCCACTGCTTCTGCCCCCT...AGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp CTGTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGCAGACTTACCACTGCTaGGCCCATTGTAGTATTGGC +
Preference number: 4 (lower is better)
Translates to: LSPRIRGGHQERRQRKRLQTYHC*AHCSIG
Trigger: GCCAATACTACAATGGGCCCAGCAGTGGTAAGTCTG...CAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CAA 72 bp AGAGGCAGGTCGACTGAGAAGAGGTCTGAGGGGACATaGGGCTGGTGGATGTCTATGGCAGCTGTAGTGACC +
Preference number: 4 (lower is better)
Translates to: RGRSTEKRSEGT*GWWMSMAAVVT
Trigger: GGTCACTACAGCTGCCATAGACATCCACCAGCCCAATGTCCCCTCAGACCTCTTCTCAGTCGACCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp TCAGAGATGGATCAGGATGTTCTGGCCATGGCAGCTGCAGGGTGTCAGGGTTTCTTCACTGTGGCTTCTTaGGAGGGCCTCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SEMDQDVLAMAAAGCQGFFTVAS*EGLSSS
Trigger: GGAAGAGCTGAGGCCCTCTCAAGAAGCCACAGTGAA...GAAACCCTGACACCCTGCAGCTGCCATGGCCAGAACATCCTGATCCATCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp TGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACCCTGGTTCTTCTGGTTaGACAGACTCACCCTATGCT +
Preference number: 4 (lower is better)
Translates to: WVASGVLKYQDGCLPSLHPGSSG*TDSPYA
Trigger: AGCATAGGGTGAGTCTGTTCAACCAGAAGAACCAGG...GTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR GCA 90 bp TGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACGCTGCACCGGAGCAATaGTCTTGGTTTCTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: WVASGVLKYQDGCLPSLHAAPEQ*SWFLRL
Trigger: TAGACGAAGAAACCAAGAGCATTGCTCCGGTGCAGC...GTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR GCA 90 bp GCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACTCAACATCAGCTCTTCCACGATaGTCTCGGCTGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ASGVLKYQDGCLPSLHSTSALPR*SRLLSP
Trigger: AGGAGACAGCAGCCGAGAGCATCGTGGAAGAGCTGA...TGTTGAGTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp CCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGACCCAGACTTACCACTaGTGGGCCCATTGTAGTATT +
Preference number: 4 (lower is better)
Translates to: PRIRGGHQERRQRKRLSWTQTYH*WAHCSI
Trigger: AATACTACAATGGGCCCAGCAGTGGTAAGTCTGGGT...CCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp GCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGGCTGCTCATCTTGGATaGCCTTGGCCTTCTCATACT +
Preference number: 4 (lower is better)
Translates to: AGMREWQVRQARVWSPWLAAHLG*PWPSHT
Trigger: AGTATGAGAAGGCCAAGGCCATCCAAGATGAGCAGC...CAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp GTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCAGCCTCCTGGTTCTTCTaGTTGAACAGACTCACCCTA +
Preference number: 4 (lower is better)
Translates to: VGGLWGPEVPRWLSPLFAASWFF*LNRLTL
Trigger: TAGGGTGAGTCTGTTCAACCAGAAGAACCAGGAGGC...TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR TCA 90 bp GTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGGAAGCTTTGTATCTATaGGAAGCTCCAGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VPENPGWASGTKATKEAEEALYL*EAPESG
Trigger: TCCTGACTCTGGAGCTTCTCATAGATACAAAGCTTC...CTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp AATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTGGACATAGGCATCAATaGCCCTCTTCACCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: NVHAGMREWQVRQARVWSGHRHQ*PSSPAR
Trigger: TCTGGCGGGTGAAGAGGGTCATTGATGCCTATGTCC...AGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp GAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCTCATTGTAGTATTGGCTaGTGTAGCTGTTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: EWQVRQARVWSPWLWRLPHCSIG*CSCSCH
Trigger: ATGACATGAACAGCTACATCAGCCAATACTACAATG...AGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp TGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACCTGAGCAAAAATACCTaGCATACGGCTGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: WVASGVLKYQDGCLPSLHLSKNT*HTAALF
Trigger: GAAGAGAGCAGCCGTATGGCAGGTATTTTTGCTCAG...GTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp CTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGCCTCAGGAACTGTATaGAACTTTGGCTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LWEIRWDPEPLVWPWVASASGTV*NFGSLD
Trigger: ATCCAAAGAGCCAAAGTTGCATACAGTTCCTGAGGC...AGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp AAGGGTGAGAGCTGGAGAACCAGCAGTTTAGATGAGGACAAGGGAAAGGAGAAACTTGTAGCGGCTGCGTaGCTGGCTGAGCACGTGTGG +
Preference number: 4 (lower is better)
Translates to: KGESWRTSSLDEDKGKEKLVAAA*LAEHVW
Trigger: CCACACGTGCTCAGCCAGCCACGCAGCCGCTACAAG...TTTCTCCTTTCCCTTGTCCTCATCTAAACTGCTGGTTCTCCAGCTCTCACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp TGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACTGTCATCTTTCACTGTaGCTTCTTGAGAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WVASGVLKYQDGCLPSLHCHLSL*LLERAS
Trigger: TGAGGCCCTCTCAAGAAGCCACAGTGAAAGATGACA...GTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp GCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACTCAACACTCCACTGTCACTGCTaGGCCCATTGTAGTATTGGC +
Preference number: 4 (lower is better)
Translates to: ASGVLKYQDGCLPSLHSTLHCHC*AHCSIG
Trigger: GCCAATACTACAATGGGCCCAGCAGTGACAGTGGAG...TGTTGAGTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR GCA 90 bp AAGGGTGAGAGCTGGAGAACCAGCAGTTTAGATGAGGACAAGGGAAAGGAGAAAAGGTGCGCACGCAGCTaGCGGATCTCAAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: KGESWRTSSLDEDKGKEKRCARS*RISNPC
Trigger: GCAAGGGTTTGAGATCCGGCAGCTGCGTGCGCACCT...TTTCTCCTTTCCCTTGTCCTCATCTAAACTGCTGGTTCTCCAGCTCTCACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CAA 72 bp AGTGCTTCTCAGTGGAAGCACTTCTCAGCTAGTGCTTaGGCCTCGAGGTCCACCTTGTACTCAGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: SASQWKHFSASA*ASRSTLYSVRT
Trigger: AGTCCTCACTGAGTACAAGGTGGACCTCGAGGCCAAAGCACTAGCTGAGAAGTGCTTCCACTGAGAAGCACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
3UTR CAA 72 bp ACTTTGAAGGCCAGAGAGGTGCCGGCAACAGAAGTGTaGCTAGGTGTCAGAAGCAGCCATGGTAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TLKAREVPATEV*LGVRSSHGKEQ
Trigger: CTGCTCTTTACCATGGCTGCTTCTGACACCTAGCAACACTTCTGTTGCCGGCACCTCTCTGGCCTTCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp CTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGAAACTGTTGAGACTTaGACTGAGCAAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: LWEIRWDPEPLVWPWVASETVET*TEQKYL
Trigger: CAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTC...AGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp AATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTTTGGCCTTCTCATACTaGTGGGTGACCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: NVHAGMREWQVRQARVWSLAFSY*WVTISI
Trigger: GATGGAGATGGTCACCCAGCAGTATGAGAAGGCCAA...AGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp GTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCATCAGACCCTTCTCTTTaGTACTCTTCGTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: VGGLWGPEVPRWLSPLFASDPSL*YSSSKF
Trigger: GAATTTGGACGAAGAGTACCAAAGAGAAGGGTCTGA...TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp CGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGCCCCCACACAAAGCATTGGAAAACTaGAGAAGCTTTGTATCTATG +
Preference number: 4 (lower is better)
Translates to: RGGHQERRQRKRLSWPPHKALEN*RSFVSM
Trigger: CATAGATACAAAGCTTCTCCAGTTTTCCAATGCTTT...GTGTGGGGGCCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp GAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCTAAAGCATTGGAAAACTaGAGAAGCTTTGTATCTATG +
Preference number: 4 (lower is better)
Translates to: EWQVRQARVWSPWLWRLPKALEN*RSFVSM
Trigger: CATAGATACAAAGCTTCTCCAGTTTTCCAATGCTTT...AGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp AATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTTCAAACCCTTGCTCCTaGCAGATTTGCGTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: NVHAGMREWQVRQARVWSSNPCS*QICVSL
Trigger: AAGACTGACGCAAATCTGTCAGGAGCAAGGGTTTGA...AGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp AAATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCCTGAGCAAAAATACCTaGCATACGGCTGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KCPCWNERMAGETGSGVVLSKNT*HTAALF
Trigger: GAAGAGAGCAGCCGTATGGCAGGTATTTTTGCTCAG...GACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp GCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGGAAACTGTTGAGACTTaGACTGAGCAAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: AGMREWQVRQARVWSPWLETVET*TEQKYL
Trigger: CAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTC...CAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp GTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACAAACTGGAAAGCATTaGAAAACTGGAGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VGGLWGPEVPRWLSPLFAQTGKH*KTGEAL
Trigger: CAAAGCTTCTCCAGTTTTCCAATGCTTTCCAGTTTG...TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp AAGGGTGAGAGCTGGAGAACCAGCAGTTTAGATGAGGACAAGGGAAAGGAGAAATCTCCATCTCCAACTTaGCTGGCAGGACATAGGCAT +
Preference number: 4 (lower is better)
Translates to: KGESWRTSSLDEDKGKEKSPSPT*LAGHRH
Trigger: ATGCCTATGTCCTGCCAGTCAAGTTGGAGATGGAGA...TTTCTCCTTTCCCTTGTCCTCATCTAAACTGCTGGTTCTCCAGCTCTCACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR TCA 90 bp GCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCACTCAACACATTGTAGTATTGGCTaGTGTAGCTGTTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: ASGVLKYQDGCLPSLHSTHCSIG*CSCSCH
Trigger: ATGACATGAACAGCTACATCAGCCAATACTACAATG...TGTTGAGTGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp TTAGTGGTAGTGGTAGTAGTTGATGTGTGCATGCTCATGAGTATGGGAGCACCTTTGGCCTTCTCATACTaGTGGGTGACCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: LVVVVVVDVCMLMSMGAPLAFSY*WVTISI
Trigger: GATGGAGATGGTCACCCAGCAGTATGAGAAGGCCAA...AGGTGCTCCCATACTCATGAGCATGCACACATCAACTACTACCACTACCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp CTAGGCCTCAGGAACTGTATGCAACTTTGGCTCTTTGGATTCCAAAGATCTGAACATCTTGGATGGCCTTaGCCTTCTCATACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGLRNCMQLWLFGFQRSEHLGWP*PSHTAG
Trigger: CCCAGCAGTATGAGAAGGCCAAGGCCATCCAAGATG...TTCAGATCTTTGGAATCCAAAGAGCCAAAGTTGCATACAGTTCCTGAGGCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CCA 90 bp AATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTTCTTCGTCTACTTGTTaGGAGATAATCTCAACTTCA +
Preference number: 4 (lower is better)
Translates to: NVHAGMREWQVRQARVWSSSSTC*EIISTS
Trigger: TGAAGTTGAGATTATCTCCCAACAAGTAGACGAAGA...AGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CCA 90 bp CTAGGCCTCAGGAACTGTATGCAACTTTGGCTCTTTGGATTCCAAAGATCTGAAGCTGCTCATCTTGGATaGCCTTGGCCTTCTCATACT +
Preference number: 4 (lower is better)
Translates to: LGLRNCMQLWLFGFQRSEAAHLG*PWPSHT
Trigger: AGTATGAGAAGGCCAAGGCCATCCAAGATGAGCAGC...TTCAGATCTTTGGAATCCAAAGAGCCAAAGTTGCATACAGTTCCTGAGGCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR GCA 90 bp CCTATAGTGGAGAGTGCAAGAATTTCAAGGACTGTAAAATCCAAACTCAAGGTTGGGCTGCATAGTGCATaGAAACAGTCCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: PIVESARISRTVKSKLKVGLHSA*KQSQPR
Trigger: TCTGGGTTGGGACTGTTTGCATGCACTATGCAGCCC...AACCTTGAGTTTGGATTTTACAGTCCTTGAAATTCTTGCACTCTCCACTATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp GCCTCTGCCTGGCGTCACCTCCCTGGAGGCAGACAGCACCCTGTGGGAGATCAGTTCCAGCTGCTCATCTaGGATGGCCTTGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: ASAWRHLPGGRQHPVGDQFQLLI*DGLGLL
Trigger: GAGAAGGCCAAGGCCATCCAAGATGAGCAGCTGGAA...CTGATCTCCCACAGGGTGCTGTCTGCCTCCAGGGAGGTGACGCCAGGCAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp GAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCTAGGTCTGAGGGGACATaGGGCTGGTGGATGTCTATG +
Preference number: 5 (lower is better)
Translates to: EWQVRQARVWSPWLWRLPRSEGT*GWWMSM
Trigger: CATAGACATCCACCAGCCCAATGTCCCCTCAGACCT...AGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS TCA 90 bp AGACCCTTCTCTTTGGTACTCTTCGTCCAAATTCGACAGGAGCTGTaGGCCCCCTGTGGAGAGGTCTACGGCAGCCAGGGGCAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: RPFSLVLFVQIRQEL*APCGEVYGSQGQVP
Trigger: CGGGACCTGCCCCTGGCTGCCGTAGACCTCTCCACAGGGGGCTCACAGCTCCTGTCGAATTTGGACGAAGAGTACCAAAGAGAAGGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS CCA 90 bp TTTGGTACTCTTCGTCCAAATTCGACAGGAGCTGTGAGCCCCCTGTaGAGAGGTCTACGGCAGCCAGGGGCAGGTCCCGATAGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: FGTLRPNSTGAVSPL*RGLRQPGAGPDRQS
Trigger: ACTTTGCCTATCGGGACCTGCCCCTGGCTGCCGTAGACCTCTCCACAGGGGGCTCACAGCTCCTGTCGAATTTGGACGAAGAGTACCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CAA 90 bp AATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGTTCCAGCTGCTCATCTaGGATGGCCTTGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: NERMAGETGSGVVSVVVAFQLLI*DGLGLL
Trigger: GAGAAGGCCAAGGCCATCCAAGATGAGCAGCTGGAA...CGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp GTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCCGGATCTCAAACCCTaGCTCCTGACAGATTTGCGT +
Preference number: 5 (lower is better)
Translates to: VPENPGWASGTKATKEAEPDLKP*LLTDLR
Trigger: ACGCAAATCTGTCAGGAGCAAGGGTTTGAGATCCGG...CTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp GACAGCACCCTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGCCGGATCTCAAACCCTaGCTCCTGACAGATTTGCGT +
Preference number: 5 (lower is better)
Translates to: DSTLWEIRWDPEPLVWPWPDLKP*LLTDLR
Trigger: ACGCAAATCTGTCAGGAGCAAGGGTTTGAGATCCGG...CCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAGGGTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp CTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTTTTCACTGTGGCTTCTaGAGAGGGCCTCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LWEIRWDPEPLVWPWVASFHCGF*RGPQLF
Trigger: GAAGAGCTGAGGCCCTCTCAAGAAGCCACAGTGAAA...AGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp CGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGCCCCCACACATGGCAGGTTGTGGATaGGCCATGTTGAAAGATGTA +
Preference number: 5 (lower is better)
Translates to: RGGHQERRQRKRLSWPPHMAGCG*AMLKDV
Trigger: TACATCTTTCAACATGGCCAATCCACAACCTGCCAT...GTGTGGGGGCCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CAA 90 bp GAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTGCTACCAGGAAACTGTaGAGACTTGCACTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: ERMAGETGSGVVSVVVAAATRKL*RLALSK
Trigger: TTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGC...AGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp GAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTGGGCCCATTGTAGTATaGGCTGATGTAGCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: ERMAGETGSGVVSVVVAAGPIVV*ADVAVH
Trigger: ATGAACAGCTACATCAGCCAATACTACAATGGGCCC...AGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp GACAGCACCCTGTGGGAGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGTCCTGGTTCTTCTGGTaGAACAGACTCACCCTATGC +
Preference number: 5 (lower is better)
Translates to: DSTLWEIRWDPEPLVWPWSWFFW*NRLTLC
Trigger: GCATAGGGTGAGTCTGTTCAACCAGAAGAACCAGGA...CCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCTCCCACAGGGTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CAA 90 bp CCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGTCCTTCAATGGCAGGTaGTGGATTGGCCATGTTGAA +
Preference number: 5 (lower is better)
Translates to: PRIRGGHQERRQRKRLSWSFNGR*WIGHVE
Trigger: TTCAACATGGCCAATCCACAACCTGCCATTGAAGGA...CCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CAA 90 bp GAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTCCGTGGTTGTGGCGGCTCCCTGGTTTCTTCGTCTACTaGTTGGGAGATAATCTCAAC +
Preference number: 5 (lower is better)
Translates to: EWQVRQARVWSPWLWRLPGFFVY*LGDNLN
Trigger: GTTGAGATTATCTCCCAACAAGTAGACGAAGAAACC...AGGGAGCCGCCACAACCACGGAGACCACACCCGAGCCTGTCTCACCTGCCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CAA 90 bp GTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCATTGCTCCTGACAGATTaGCGTCAGTCTTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VGGLWGPEVPRWLSPLFALLLTD*RQSFQL
Trigger: CAGCTGGAAAGACTGACGCAAATCTGTCAGGAGCAA...TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS GCA 90 bp ATTGGGCTGGTGGATGTCTATGGCAGCTGTAGTGACCACACATACTaGTGGTTCTGGGGCTCCACTGTCACTGCTGGGCCCATTGTAGTA +
Preference number: 5 (lower is better)
Translates to: IGLVDVYGSCSDHTY*WFWGSTVTAGPIVV
Trigger: TACTACAATGGGCCCAGCAGTGACAGTGGAGCCCCAGAACCAGCAGTATGTGTGGTCACTACAGCTGCCATAGACATCCACCAGCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CAA 90 bp GTCCCCGAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGGTCAGACCCTTCTCTTaGGTACTCTTCGTCCAAATT +
Preference number: 5 (lower is better)
Translates to: VPENPGWASGTKATKEAEVRPFS*VLFVQI
Trigger: AATTTGGACGAAGAGTACCAAAGAGAAGGGTCTGAC...CTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CAA 90 bp GTGGGTGGCCTCTGGGGTCCTGAAGTACCAAGATGGCTGTCTCCCCTCTTTGCAGGGCCCATTGTAGTATaGGCTGATGTAGCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: VGGLWGPEVPRWLSPLFAGPIVV*ADVAVH
Trigger: ATGAACAGCTACATCAGCCAATACTACAATGGGCCC...TGCAAAGAGGGGAGACAGCCATCTTGGTACTTCAGGACCCCAGAGGCCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp AGATCAGATGGGATCCTGAGCCCCTTGTATGGCCGTGGGTGGCCTCTGGGGTCCGAACTGTATGCAACTTaGGCTCTTTGGATTCCAAAG +
Preference number: 5 (lower is better)
Translates to: RSDGILSPLYGRGWPLGSELYAT*ALWIPK
Trigger: CTTTGGAATCCAAAGAGCCAAAGTTGCATACAGTTC...GGACCCCAGAGGCCACCCACGGCCATACAAGGGGCTCAGGATCCCATCTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS GCA 90 bp CAGGCTACCAGGAAACTGTTGAGACTTGCACTGAGCAAAAATACCTaGCATACGGCTGCTCTCTTCCCACAGCACGGCTTCAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: QATRKLLRLALSKNT*HTAALFPQHGFSQS
Trigger: TGACTGGCTGAAGCCGTGCTGTGGGAAGAGAGCAGCCGTATGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CCA 90 bp GTGGATGTCTATGGCAGCTGTAGTGACCACACATACTGCTGGTTCTaGGGCTCCACTGTCACTGCTGGGCCCATTGTAGTATTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: VDVYGSCSDHTYCWF*GSTVTAGPIVVLAD
Trigger: ATCAGCCAATACTACAATGGGCCCAGCAGTGACAGTGGAGCCCCAGAACCAGCAGTATGTGTGGTCACTACAGCTGCCATAGACATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS GCA 90 bp GAAACTGTTGAGACTTGCACTGAGCAAAAATACCTGCCATACGGCTaGTCTCTTCCCACAGCACGGCTTCAGCCAGTCAGACCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ETVETCTEQKYLPYG*SLPTARLQPVRPFS
Trigger: AGAGAAGGGTCTGACTGGCTGAAGCCGTGCTGTGGGAAGAGAGCAGCCGTATGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS GCA 90 bp GAAACTGTTGAGACTTGCACTGAGCAAAAATACCTGCCATACGGCTaGTCTCTTCCCACAGCACGGCTTCAGCCAGTCAGACCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: ETVETCTEQKYLPYG*SLPTARLQPVRPES
Trigger: GCTTTCAGGTCTGACTGGCTGAAGCCGTGCTGTGGGAAGAGAGCAGCCGTATGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp GAGAATCCGGGGTGGGCATCAGGAACGAAGGCAACGAAAGAGGCTGAGCTGGCCTTCTTCGTCTACTTGTaGGGAGATAATCTCAACTTC +
Preference number: 5 (lower is better)
Translates to: ENPGWASGTKATKEAELAFFVYL*GDNLNF
Trigger: GAAGTTGAGATTATCTCCCAACAAGTAGACGAAGAA...GGCCAGCTCAGCCTCTTTCGTTGCCTTCGTTCCTGATGCCCACCCCGGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS-3UTR CAA 90 bp AATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTTTGCTCCTGACAGATTaGCGTCAGTCTTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: NVHAGMREWQVRQARVWSLLLTD*RQSFQL
Trigger: CAGCTGGAAAGACTGACGCAAATCTGTCAGGAGCAA...AGACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS TCA 90 bp GTTCTGGGGCTCCACTGTCACTGCTGGGCCCATTGTAGTATTGGCTaGTGTAGCTGTTCATGTCATCTTTCACTGTGGCTTCTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: VLGLHCHCWAHCSIG*CSCSCHLSLWLLER
Trigger: CCTCTCAAGAAGCCACAGTGAAAGATGACATGAACAGCTACATCAGCCAATACTACAATGGGCCCAGCAGTGACAGTGGAGCCCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS TCA 90 bp GTCCCAACCCAGACTTACCACTGCTGGGCCCATTGTAGTATTGGCTaGTGTAGCTGTTCATGTCATCTTTCACTGTGGCTTCTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: VPTQTYHCWAHCSIG*CSCSCHLSLWLLER
Trigger: CCTCTCAAGAAGCCACAGTGAAAGATGACATGAACAGCTACATCAGCCAATACTACAATGGGCCCAGCAGTGGTAAGTCTGGGTTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp TTGGGAGTTTTAAATGGGCTGGAGGAGTGTGGTATGTGTCCTGAGTGGTCTGTTTTTCACTGTGGCTTCTaGAGAGGGCCTCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LGVLNGLEECGMCPEWSVFHCGF*RGPQLF
Trigger: GAAGAGCTGAGGCCCTCTCAAGAAGCCACAGTGAAA...AACAGACCACTCAGGACACATACCACACTCCTCCAGCCCATTTAAAACTCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp AAATGTCCATGCTGGAATGAGAGAATGGCAGGTGAGACAGGCTCGGGTGTGGTCTGCAACTTTGGCTCTTaGGATTCCAAAGATCTGAAC +
Preference number: 5 (lower is better)
Translates to: KCPCWNERMAGETGSGVVCNFGS*DSKDLN
Trigger: GTTCAGATCTTTGGAATCCAAAGAGCCAAAGTTGCA...GACCACACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS GCA 90 bp GATCACCACCAATATTACACAGGCTACCAGGAAACTGTTGAGACTTaGACTGAGCAAAAATACCTGCCATACGGCTGCTCTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: DHHQYYTGYQETVET*TEQKYLPYGCSLPT
Trigger: TGTGGGAAGAGAGCAGCCGTATGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTGTGTAATATTGGTGGTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CCA 90 bp ACCAGCTGCACCGGAGCAATGCTCTTGGTTTCTTCGTCTACTTGTTaGGAGATAATCTCAACTTCAGAAATTCCTCCTTCAATGGCAGGT +
Preference number: 5 (lower is better)
Translates to: TSCTGAMLLVSSSTC*EIISTSEIPPSMAG
Trigger: ACCTGCCATTGAAGGAGGAATTTCTGAAGTTGAGATTATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCGGTGCAGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS TCA 90 bp ACAGTCTCTGAGAAGAACACAGAGAGAATGACCAGACTGATCCAGTaGATGACACCAGCAAACTGGAAAGCATTGGAAAACTGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: TVSEKNTERMTRLIQ*MTPANWKALENWRS
Trigger: GCTTCTCCAGTTTTCCAATGCTTTCCAGTTTGCTGGTGTCATTCACTGGATCAGTCTGGTCATTCTCTCTGTGTTCTTCTCAGAGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS-3UTR CAA 90 bp CTAGGCCTCAGGAACTGTATGCAACTTTGGCTCTTTGGATTCCAAAGATCTGAAGCTACCAGGAAACTGTaGAGACTTGCACTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: LGLRNCMQLWLFGFQRSEATRKL*RLALSK
Trigger: TTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGC...TTCAGATCTTTGGAATCCAAAGAGCCAAAGTTGCATACAGTTCCTGAGGCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS TCA 90 bp CAGCAAACTGGAAAGCATTGGAAAACTGGAGAAGCTTTGTATCTATaGGAAGCTCCAGAGTCAGGAGGATCACCACCAATATTACACAGG +
Preference number: 5 (lower is better)
Translates to: QQTGKHWKTGEALYL*EAPESGGSPPILHR
Trigger: CCTGTGTAATATTGGTGGTGATCCTCCTGACTCTGGAGCTTCTCATAGATACAAAGCTTCTCCAGTTTTCCAATGCTTTCCAGTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CCA 72 bp GACCTTGTAGCGGCTGCGTGGCTGGCTGAGCACGTGTaGGGCCTGCAGCGCCGCCTCCCGCTCGGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: DLVAAAWLAEHV*GLQRRLPLGCQ
Trigger: CTGGCAGCCGAGCGGGAGGCGGCGCTGCAGGCCCCACACGTGCTCAGCCAGCCACGCAGCCGCTACAAGGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS GCA 72 bp CGCCTCCCGCTCGGCTGCCAGATCCAGGTCCTGCTGTaGCAGGTGCGCACGCAGCTGCCGGATCTCAAACCC +
Preference number: 6 (lower is better)
Translates to: RLPLGCQIQVLL*QVRTQLPDLKP
Trigger: GGGTTTGAGATCCGGCAGCTGCGTGCGCACCTGGCACAGCAGGACCTGGATCTGGCAGCCGAGCGGGAGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CCA 72 bp CTTCGTCCAAATTCGACAGGAGCTGTGAGCCCCCTGTaGAGAGGTCTACGGCAGCCAGGGGCAGGTCCCGAT +
Preference number: 6 (lower is better)
Translates to: LRPNSTGAVSPL*RGLRQPGAGPD
Trigger: ATCGGGACCTGCCCCTGGCTGCCGTAGACCTCTCCACAGGGGGCTCACAGCTCCTGTCGAATTTGGACGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS TCA 72 bp TCTTTGGTACTCTTCGTCCAAATTCGACAGGAGCTGTaGGCCCCCTGTGGAGAGGTCTACGGCAGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: SLVLFVQIRQEL*APCGEVYGSQG
Trigger: CCCCTGGCTGCCGTAGACCTCTCCACAGGGGGCTCACAGCTCCTGTCGAATTTGGACGAAGAGTACCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS GCA 72 bp GTGGATGTCTATGGCAGCTGTAGTGACCACACATACTaGTGGTTCTGGGGCTCCACTGTCACTGCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: VDVYGSCSDHTY*WFWGSTVTAGP
Trigger: GGGCCCAGCAGTGACAGTGGAGCCCCAGAACCAGCAGTATGTGTGGTCACTACAGCTGCCATAGACATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS GCA 72 bp GAGACTTGCACTGAGCAAAAATACCTGCCATACGGCTaGTCTCTTCCCACAGCACGGCTTCAGCCAGTCAGA +
Preference number: 6 (lower is better)
Translates to: ETCTEQKYLPYG*SLPTARLQPVR
Trigger: TCTGACTGGCTGAAGCCGTGCTGTGGGAAGAGAGCAGCCGTATGGCAGGTATTTTTGCTCAGTGCAAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS GCA 72 bp AGCTGCTCATCTTGGATGGCCTTGGCCTTCTCATACTaGTGGGTGACCATCTCCATCTCCAACTTGACTGGC +
Preference number: 6 (lower is better)
Translates to: SCSSWMALAFSY*WVTISISNLTG
Trigger: GCCAGTCAAGTTGGAGATGGAGATGGTCACCCAGCAGTATGAGAAGGCCAAGGCCATCCAAGATGAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 72 bp TGCGTCAGTCTTTCCAGCTGCTCATCTTGGATGGCCTaGGCCTTCTCATACTGCTGGGTGACCATCTCCATC +
Preference number: 6 (lower is better)
Translates to: CVSLSSCSSWMA*AFSYCWVTISI
Trigger: GATGGAGATGGTCACCCAGCAGTATGAGAAGGCCAAGGCCATCCAAGATGAGCAGCTGGAAAGACTGACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 72 bp CAGCTGCCGGATCTCAAACCCTTGCTCCTGACAGATTaGCGTCAGTCTTTCCAGCTGCTCATCTTGGATGGC +
Preference number: 6 (lower is better)
Translates to: QLPDLKPLLLTD*RQSFQLLILDG
Trigger: GCCATCCAAGATGAGCAGCTGGAAAGACTGACGCAAATCTGTCAGGAGCAAGGGTTTGAGATCCGGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 90 bp CCCTTGCTCCTGACAGATTTGCGTCAGTCTTTCCAGCTGCTCATCTaGGATGGCCTTGGCCTTCTCATACTGCTGGGTGACCATCTCCAT +
Preference number: 6 (lower is better)
Translates to: PLLLTDLRQSFQLLI*DGLGLLILLGDHLH
Trigger: ATGGAGATGGTCACCCAGCAGTATGAGAAGGCCAAGGCCATCCAAGATGAGCAGCTGGAAAGACTGACGCAAATCTGTCAGGAGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 72 bp CTGACAGATTTGCGTCAGTCTTTCCAGCTGCTCATCTaGGATGGCCTTGGCCTTCTCATACTGCTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: LTDLRQSFQLLI*DGLGLLILLGD
Trigger: GTCACCCAGCAGTATGAGAAGGCCAAGGCCATCCAAGATGAGCAGCTGGAAAGACTGACGCAAATCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 72 bp GATGTAGCTGTTCATGTCATCTTTCACTGTGGCTTCTaGAGAGGGCCTCAGCTCTTCCACGATGCTCTCGGC +
Preference number: 6 (lower is better)
Translates to: DVAVHVIFHCGF*RGPQLFHDALG
Trigger: GCCGAGAGCATCGTGGAAGAGCTGAGGCCCTCTCAAGAAGCCACAGTGAAAGATGACATGAACAGCTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 90 bp GTATTGGCTGATGTAGCTGTTCATGTCATCTTTCACTGTGGCTTCTaGAGAGGGCCTCAGCTCTTCCACGATGCTCTCGGCTGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: VLADVAVHVIFHCGF*RGPQLFHDALGCCL
Trigger: GAGACAGCAGCCGAGAGCATCGTGGAAGAGCTGAGGCCCTCTCAAGAAGCCACAGTGAAAGATGACATGAACAGCTACATCAGCCAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 90 bp TGCTGGTTCTGGGGCTCCACTGTCACTGCTGGGCCCATTGTAGTATaGGCTGATGTAGCTGTTCATGTCATCTTTCACTGTGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: CWFWGSTVTAGPIVV*ADVAVHVIFHCGFL
Trigger: CAAGAAGCCACAGTGAAAGATGACATGAACAGCTACATCAGCCAATACTACAATGGGCCCAGCAGTGACAGTGGAGCCCCAGAACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS GCA 72 bp AGGAAACTGTTGAGACTTGCACTGAGCAAAAATACCTaGCATACGGCTGCTCTCTTCCCACAGCACGGCTTC +
Preference number: 6 (lower is better)
Translates to: RKLLRLALSKNT*HTAALFPQHGF
Trigger: GAAGCCGTGCTGTGGGAAGAGAGCAGCCGTATGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 90 bp GTCAGGAGGATCACCACCAATATTACACAGGCTACCAGGAAACTGTaGAGACTTGCACTGAGCAAAAATACCTGCCATACGGCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: VRRITTNITQATRKL*RLALSKNTCHTAAL
Trigger: GAGAGCAGCCGTATGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTGTGTAATATTGGTGGTGATCCTCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS TCA 72 bp CTCCACTGTCACTGCTGGGCCCATTGTAGTATTGGCTaGTGTAGCTGTTCATGTCATCTTTCACTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: LHCHCWAHCSIG*CSCSCHLSLWL
Trigger: AAGCCACAGTGAAAGATGACATGAACAGCTACATCAGCCAATACTACAATGGGCCCAGCAGTGACAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS CAA 90 bp CACCAGCTGCACCGGAGCAATGCTCTTGGTTTCTTCGTCTACTTGTaGGGAGATAATCTCAACTTCAGAAATTCCTCCTTCAATGGCAGG +
Preference number: 6 (lower is better)
Translates to: HQLHRSNALGFFVYL*GDNLNFRNSSFNGR
Trigger: CCTGCCATTGAAGGAGGAATTTCTGAAGTTGAGATTATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCGGTGCAGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS CAA 90 bp AAACAGTCCCAACCCAGACTTACCACTGCTGGGCCCATTGTAGTATaGGCTGATGTAGCTGTTCATGTCATCTTTCACTGTGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: KQSQPRLTTAGPIVV*ADVAVHVIFHCGFL
Trigger: CAAGAAGCCACAGTGAAAGATGACATGAACAGCTACATCAGCCAATACTACAATGGGCCCAGCAGTGGTAAGTCTGGGTTGGGACTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS CAA 90 bp GTTCACCAGCTGCACCGGAGCAATGCTCTTGGTTTCTTCGTCTACTaGTTGGGAGATAATCTCAACTTCAGAAATTCCTCCTTCAATGGC +
Preference number: 6 (lower is better)
Translates to: VHQLHRSNALGFFVY*LGDNLNFRNSSFNG
Trigger: GCCATTGAAGGAGGAATTTCTGAAGTTGAGATTATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCGGTGCAGCTGGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS TCA 72 bp CAGACTTACCACTGCTGGGCCCATTGTAGTATTGGCTaGTGTAGCTGTTCATGTCATCTTTCACTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: QTYHCWAHCSIG*CSCSCHLSLWL
Trigger: AAGCCACAGTGAAAGATGACATGAACAGCTACATCAGCCAATACTACAATGGGCCCAGCAGTGGTAAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS CAA 72 bp CAACCCAGACTTACCACTGCTGGGCCCATTGTAGTATaGGCTGATGTAGCTGTTCATGTCATCTTTCACTGT +
Preference number: 6 (lower is better)
Translates to: QPRLTTAGPIVV*ADVAVHVIFHC
Trigger: ACAGTGAAAGATGACATGAACAGCTACATCAGCCAATACTACAATGGGCCCAGCAGTGGTAAGTCTGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085754.10
CDS GCA 72 bp CAATATTACACAGGCTACCAGGAAACTGTTGAGACTTaGACTGAGCAAAAATACCTGCCATACGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: QYYTGYQETVET*TEQKYLPYGCS
Trigger: AGAGCAGCCGTATGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTGTGTAATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 72 bp CTGCACCGGAGCAATGCTCTTGGTTTCTTCGTCTACTaGTTGGGAGATAATCTCAACTTCAGAAATTCCTCC +
Preference number: 6 (lower is better)
Translates to: LHRSNALGFFVY*LGDNLNFRNSS
Trigger: GGAGGAATTTCTGAAGTTGAGATTATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCGGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5
CDS TCA 72 bp GGAAAGCATTGGAAAACTGGAGAAGCTTTGTATCTATaGGAAGCTCCAGAGTCAGGAGGATCACCACCAATA +
Preference number: 6 (lower is better)
Translates to: GKHWKTGEALYL*EAPESGGSPPI
Trigger: TATTGGTGGTGATCCTCCTGACTCTGGAGCTTCTCATAGATACAAAGCTTCTCCAGTTTTCCAATGCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS TCA 72 bp GAGAAGAACACAGAGAGAATGACCAGACTGATCCAGTaGATGACACCAGCAAACTGGAAAGCATTGGAAAAC +
Preference number: 6 (lower is better)
Translates to: EKNTERMTRLIQ*MTPANWKALEN
Trigger: GTTTTCCAATGCTTTCCAGTTTGCTGGTGTCATTCACTGGATCAGTCTGGTCATTCTCTCTGTGTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CAA 72 bp ATCACCACCAATATTACACAGGCTACCAGGAAACTGTaGAGACTTGCACTGAGCAAAAATACCTGCCATACG +
Preference number: 6 (lower is better)
Translates to: ITTNITQATRKL*RLALSKNTCHT
Trigger: CGTATGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTGTGTAATATTGGTGGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034862.5
ENSMUST00000085754.10
CDS CCA 72 bp ACCGGAGCAATGCTCTTGGTTTCTTCGTCTACTTGTTaGGAGATAATCTCAACTTCAGAAATTCCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: TGAMLLVSSSTC*EIISTSEIPPS
Trigger: TGAAGGAGGAATTTCTGAAGTTGAGATTATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034862.5