Pregenerated sensors for TMEM265 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000106715Ensembl transcript IDs: ENSMUST00000084563.11, ENSMUST00000190278.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGCCAGAGTGATGGAATTCCCTGGAAGTGGAGTTTTGAGCTGCTaGATATGGGTGTTGGGATCCAAACTTGGGTCCTCTGCAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: VARVMEFPGSGVLSC*IWVLGSKLGSSARA Trigger: TGCTCTTGCAGAGGACCCAAGTTTGGATCCCAACACCCATATCCAGCAGCTCAAAACTCCACTTCCAGGGAATTCCATCACTCTGGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR CCA 90 bp | CTTGAAGTCTCAGGTGCTTTGAATAGCCTAGTTGAGCTCTTCCAATaGCTCCATTCCAAAGGCAACATTCTTCCAGACAGGAAGAACCAC | + |
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Preference number: 1 (lower is better) Translates to: LEVSGALNSLVELFQ*LHSKGNILPDRKNH Trigger: GTGGTTCTTCCTGTCTGGAAGAATGTTGCCTTTGGAATGGAGCCATTGGAAGAGCTCAACTAGGCTATTCAAAGCACCTGAGACTTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| 3UTR CCA 90 bp | TTTATTTATGTGTGTGTTCACAGTGGCCAGAGTGATGGAATTCCCTaGAAGTGGAGTTTTGAGCTGCTGGATATGGGTGTTGGGATCCAA | + |
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Preference number: 1 (lower is better) Translates to: FIYVCVHSGQSDGIP*KWSFELLDMGVGIQ Trigger: TTGGATCCCAACACCCATATCCAGCAGCTCAAAACTCCACTTCCAGGGAATTCCATCACTCTGGCCACTGTGAACACACACATAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR-3UTR TCA 90 bp | AGACAGGAAGAACCACGAACCACTCCTGTCACCAGAACTGAGCACTGCCGAAATGATCCAGGTCTTGACTaGCTCTCAGCAAAGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: RQEEPRTTPVTRTEHCRNDPGLD*LSAKAT Trigger: GGTGGCCTTTGCTGAGAGTCAGTCAAGACCTGGATC...ATTTCGGCAGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTTCCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| 3UTR-3UTR GCA 90 bp | TTCACAGTGGCCAGAGTGATGGAATTCCCTGGAAGTGGAGTTTTGAGCTGCTGGCAAACTTGGGTCCTCTaGAAGAGCAGCAAGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: FTVARVMEFPGSGVLSCWQTWVL*KSSKYS Trigger: AGAGTACTTGCTGCTCTTGCAGAGGACCCAAGTTTG...CCAGCAGCTCAAAACTCCACTTCCAGGGAATTCCATCACTCTGGCCACTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCAGAGTGATGGAATTCCCTGGAAGTGGAGTTTTGAGCTGCTGGATATGGTTTCTCCAGCTCCTTTaGAGAAGATGCTCTTGTATT | + |
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Preference number: 2 (lower is better) Translates to: VARVMEFPGSGVLSCWIWFLQLL*RRCSCI Trigger: AATACAAGAGCATCTTCTTCAAAGGAGCTGGAGAAA...CCATATCCAGCAGCTCAAAACTCCACTTCCAGGGAATTCCATCACTCTGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR TCA 72 bp | ACAGGAAGAACCACGAACCACTCCTGTCACCAGAACTaGGCACTGCCGAAATGTTGGATTGGATCCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: TGRTTNHSCHQN*ALPKCWIGSRS Trigger: AGACCTGGATCCAATCCAACATTTCGGCAGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| 3UTR CCA 72 bp | CTGTCACCAGAACTGAGCACTGCCGAAATGTTGGATTaGATCCAGGTCTTGACTGACTCTCAGCAAAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: LSPELSTAEMLD*IQVLTDSQQRP Trigger: TGGCCTTTGCTGAGAGTCAGTCAAGACCTGGATCCAATCCAACATTTCGGCAGTGCTCAGTTCTGGTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| 3UTR-3UTR CAA 90 bp | GTTCACAGTGGCCAGAGTGATGGAATTCCCTGGAAGTGGAGTTTTGAGCTGCTGCAAGTACTCTTACTCTaGAGTCCTTTCTCCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: VHSGQSDGIPWKWSFELLQVLLL*SPFSSS Trigger: GGAGCTGGAGAAAGGACTCAAGAGTAAGAGTACTTG...CAGCAGCTCAAAACTCCACTTCCAGGGAATTCCATCACTCTGGCCACTGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR CCA 72 bp | GAATTCCCTGGAAGTGGAGTTTTGAGCTGCTGGATATaGGTGTTGGGATCCAAACTTGGGTCCTCTGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: EFPGSGVLSCWI*VLGSKLGSSAR Trigger: TCTTGCAGAGGACCCAAGTTTGGATCCCAACACCCATATCCAGCAGCTCAAAACTCCACTTCCAGGGAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR CCA 72 bp | GTGATGGAATTCCCTGGAAGTGGAGTTTTGAGCTGCTaGATATGGGTGTTGGGATCCAAACTTGGGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: VMEFPGSGVLSC*IWVLGSKLGSS Trigger: AGAGGACCCAAGTTTGGATCCCAACACCCATATCCAGCAGCTCAAAACTCCACTTCCAGGGAATTCCATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR CCA 72 bp | GTGTGTGTTCACAGTGGCCAGAGTGATGGAATTCCCTaGAAGTGGAGTTTTGAGCTGCTGGATATGGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: VCVHSGQSDGIP*KWSFELLDMGV Trigger: AACACCCATATCCAGCAGCTCAAAACTCCACTTCCAGGGAATTCCATCACTCTGGCCACTGTGAACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR TCA 72 bp | TGGGTCCTCTGCAAGAGCAGCAAGTACTCTTACTCTTaGGTCCTTTCTCCAGCTCCTTTGAAGAAGATGCTC | + |
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Preference number: 3 (lower is better) Translates to: WVLCKSSKYSYS*VLSPAPLKKML Trigger: GAGCATCTTCTTCAAAGGAGCTGGAGAAAGGACTCAAGAGTAAGAGTACTTGCTGCTCTTGCAGAGGACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR CCA 72 bp | TCAGGTGCTTTGAATAGCCTAGTTGAGCTCTTCCAATaGCTCCATTCCAAAGGCAACATTCTTCCAGACAGG | + |
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Preference number: 3 (lower is better) Translates to: SGALNSLVELFQ*LHSKGNILPDR Trigger: CCTGTCTGGAAGAATGTTGCCTTTGGAATGGAGCCATTGGAAGAGCTCAACTAGGCTATTCAAAGCACCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR TCA 90 bp | GAAATGTTGGATTGGATCCAGGTCTTGACTGACTCTCAGCAAAGGCCACCCAGGCAAAACTGGCCAGAATaGGTCTCCGGGCCCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: EMLDWIQVLTDSQQRPPRQNWPE*VSGPVP Trigger: GGGCACGGGCCCGGAGACTCATTCTGGCCAGTTTTG...CCTGGGTGGCCTTTGCTGAGAGTCAGTCAAGACCTGGATCCAATCCAACATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR CCA 90 bp | GACAGGAAGAACCACGAACCACTCCTGTCACCAGAACTGAGCACTGCCGAAATGATGGCCTCCTCCGACTaGCCTGCCTTATGCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: DRKNHEPLLSPELSTAEMMASSD*PALCRS Trigger: AGAGCGGCATAAGGCAGGCCAGTCGGAGGAGGCCAT...CATTTCGGCAGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTTCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR CCA 90 bp | GACAGGAAGAACCACGAACCACTCCTGTCACCAGAACTGAGCACTGCCGAAATGGTGCCCTCAAGCATATaGCCTCCTCCGACTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: DRKNHEPLLSPELSTAEMVPSSI*PPPTGL Trigger: CAGGCCAGTCGGAGGAGGCCATATGCTTGAGGGCAC...CATTTCGGCAGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTTCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR TCA 90 bp | TCCAGACAGGAAGAACCACGAACCACTCCTGTCACCAGAACTGAGCACTGCCGAGCCGCTCTTCTGCCTTaGTGGCAAACACAAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRQEEPRTTPVTRTEHCRAALLP*WQTQEP Trigger: TGGCTCTTGTGTTTGCCATCAAGGCAGAAGAGCGGC...TCGGCAGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTTCCTGTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR GCA 90 bp | ATTCTTCCAGACAGGAAGAACCACGAACCACTCCTGTCACCAGAACTGAGCACTCTCCTCCGACTGGCCTaGCTTATGCCGCTCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ILPDRKNHEPLLSPELSTLLRLA*LMPLFC Trigger: GCAGAAGAGCGGCATAAGGCAGGCCAGTCGGAGGAG...AGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTTCCTGTCTGGAAGAAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR GCA 90 bp | AGACAGGAAGAACCACGAACCACTCCTGTCACCAGAACTGAGCACTGCCGAAATGAGCAGCTTCCATGTTaGTCACCAAGCTCTCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: RQEEPRTTPVTRTEHCRNEQLPC*SPSSPL Trigger: CAGCGGAGAGCTTGGTGAGCAACATGGAAGCTGCTC...ATTTCGGCAGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTTCCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR CCA 90 bp | TCCAGACAGGAAGAACCACGAACCACTCCTGTCACCAGAACTGAGCACTGCCGAGCAGTGGATAGGGGATaGAGAATGAGCAGCTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SRQEEPRTTPVTRTEHCRAVDRG*RMSSFH Trigger: ATGGAAGCTGCTCATTCTCCATCCCCTATCCACTGC...TCGGCAGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTTCCTGTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR TCA 90 bp | AGACAGGAAGAACCACGAACCACTCCTGTCACCAGAACTGAGCACTGCCGAAATCAAACACAAGAGCCATaGTCCCCAGGCAAGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: RQEEPRTTPVTRTEHCRNQTQEP*SPGKNS Trigger: GCTGTTCTTGCCTGGGGATCATGGCTCTTGTGTTTG...ATTTCGGCAGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTTCCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR GCA 90 bp | AAGAACCACGAACCACTCCTGTCACCAGAACTGAGCACTGCCGAAATGTTGGATCACCAAGCTCTCCGCTaGCTTCTCCTTGTCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KNHEPLLSPELSTAEMLDHQALR*LLLVLH Trigger: ATGGAGGACAAGGAGAAGGCAGCGGAGAGCTTGGTG...ATCCAACATTTCGGCAGTGCTCAGTTCTGGTGACAGGAGTGGTTCGTGGTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| 3UTR CAA 72 bp | CCACTCCTGTCACCAGAACTGAGCACTGCCGAAATGTaGGATTGGATCCAGGTCTTGACTGACTCTCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PLLSPELSTAEM*DWIQVLTDSQQ Trigger: TTGCTGAGAGTCAGTCAAGACCTGGATCCAATCCAACATTTCGGCAGTGCTCAGTTCTGGTGACAGGAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR CCA 90 bp | TTCCAAAGGCAACATTCTTCCAGACAGGAAGAACCACGAACCACTCCTGTCACCATTCAGCCTGAGCAATaGTGTAGGAGAGCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: FQRQHSSRQEEPRTTPVTIQPEQ*CRRAAT Trigger: TGTGGCTGCTCTCCTACACCATTGCTCAGGCTGAAT...GGTGACAGGAGTGGTTCGTGGTTCTTCCTGTCTGGAAGAATGTTGCCTTTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| 3UTR CAA 72 bp | GTGGCCAGAGTGATGGAATTCCCTGGAAGTGGAGTTTaGAGCTGCTGGATATGGGTGTTGGGATCCAAACTT | + |
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Preference number: 4 (lower is better) Translates to: VARVMEFPGSGV*SCWIWVLGSKL Trigger: AAGTTTGGATCCCAACACCCATATCCAGCAGCTCAAAACTCCACTTCCAGGGAATTCCATCACTCTGGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| CDS-3UTR GCA 90 bp | TTTATTTATGTGTGTGTTCACAGTGGCCAGAGTGATGGAATTCCCTGGAAGTGGCACCAAGCTCTCCGCTaGCTTCTCCTTGTCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: FIYVCVHSGQSDGIPWKWHQALR*LLLVLH Trigger: ATGGAGGACAAGGAGAAGGCAGCGGAGAGCTTGGTG...CCACTTCCAGGGAATTCCATCACTCTGGCCACTGTGAACACACACATAAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| CDS-3UTR GCA 90 bp | TTTATTTATGTGTGTGTTCACAGTGGCCAGAGTGATGGAATTCCCTGGAAGTGGGAGCAGCTTCCATGTTaGTCACCAAGCTCTCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: FIYVCVHSGQSDGIPWKWEQLPC*SPSSPL Trigger: CAGCGGAGAGCTTGGTGAGCAACATGGAAGCTGCTC...CCACTTCCAGGGAATTCCATCACTCTGGCCACTGTGAACACACACATAAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| CDS-3UTR TCA 90 bp | TTTCTCTTAATGGAGGCTCCTAGGATGGAAGGGCAAGGGAGAGAAAGCAAAGAAATAGGGGATGGAGAATaGGCAGCTTCCATGTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: FLLMEAPRMEGQGRESKEIGDGE*AASMLL Trigger: GAGCAACATGGAAGCTGCTCATTCTCCATCCCCTAT...TTCTTTGCTTTCTCTCCCTTGCCCTTCCATCCTAGGAGCCTCCATTAAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS-3UTR TCA 90 bp | CTGCAAGAGCAGCAAGTACTCTTACTCTTGAGTCCTTTCTCCAGCTCCTTTGAAATAGGGGATGGAGAATaGGCAGCTTCCATGTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LQEQQVLLLLSPFSSSFEIGDGE*AASMLL Trigger: GAGCAACATGGAAGCTGCTCATTCTCCATCCCCTAT...TTCAAAGGAGCTGGAGAAAGGACTCAAGAGTAAGAGTACTTGCTGCTCTTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| CDS-3UTR TCA 90 bp | CAAGAGCAGCAAGTACTCTTACTCTTGAGTCCTTTCTCCAGCTCCTTTGAAGAACAAACACAAGAGCCATaGTCCCCAGGCAAGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: QEQQVLLLLSPFSSSFEEQTQEP*SPGKNS Trigger: GCTGTTCTTGCCTGGGGATCATGGCTCTTGTGTTTG...TTCTTCAAAGGAGCTGGAGAAAGGACTCAAGAGTAAGAGTACTTGCTGCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| CDS-3UTR CCA 90 bp | CAAGAGCAGCAAGTACTCTTACTCTTGAGTCCTTTCTCCAGCTCCTTTGAAGAAGCAGTGGATAGGGGATaGAGAATGAGCAGCTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: QEQQVLLLLSPFSSSFEEAVDRG*RMSSFH Trigger: ATGGAAGCTGCTCATTCTCCATCCCCTATCCACTGC...TTCTTCAAAGGAGCTGGAGAAAGGACTCAAGAGTAAGAGTACTTGCTGCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| 3UTR CAA 72 bp | TTGGGTCCTCTGCAAGAGCAGCAAGTACTCTTACTCTaGAGTCCTTTCTCCAGCTCCTTTGAAGAAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: LGPLQEQQVLLL*SPFSSSFEEDA Trigger: AGCATCTTCTTCAAAGGAGCTGGAGAAAGGACTCAAGAGTAAGAGTACTTGCTGCTCTTGCAGAGGACCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| CDS-3UTR TCA 90 bp | TTTATTTATGTGTGTGTTCACAGTGGCCAGAGTGATGGAATTCCCTGGAAGTGGAAGATTTGCTGGGCTTaGTGGCAAACACAAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FIYVCVHSGQSDGIPWKWKICWA*WQTQEP Trigger: TGGCTCTTGTGTTTGCCATCAAGCCCAGCAAATCTT...CCACTTCCAGGGAATTCCATCACTCTGGCCACTGTGAACACACACATAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| CDS GCA 90 bp | AGCAAGCCAGACAGCAAAACTGGCCAGAATGAGTCTCCGGGCCCGTaGCCTCAAGCATATGGCCTCCTCCGACTGGCCTGCCTTATGCCG | + |
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Preference number: 5 (lower is better) Translates to: SKPDSKTGQNESPGP*PQAYGLLRLACLMP Trigger: CGGCATAAGGCAGGCCAGTCGGAGGAGGCCATATGCTTGAGGGCACGGGCCCGGAGACTCATTCTGGCCAGTTTTGCTGTCTGGCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS GCA 90 bp | GCCCGTGCCCTCAAGCATATGGCCTCCTCCGACTGGCCTGCCTTATaGCGCTCTTCTGCCTTGATGGCAAACACAAGAGCCATGATCCCC | + |
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Preference number: 5 (lower is better) Translates to: ARALKHMASSDWPAL*RSSALMANTRAMIP Trigger: GGGGATCATGGCTCTTGTGTTTGCCATCAAGGCAGAAGAGCGGCATAAGGCAGGCCAGTCGGAGGAGGCCATATGCTTGAGGGCACGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS GCA 90 bp | TCTCCGGGCCCGTGCCCTCAAGCATATGGCCTCCTCCGACTGGCCTaGCTTATGCCGCTCTTCTGCCTTGATGGCAAACACAAGAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SPGPCPQAYGLLRLA*LMPLFCLDGKHKSH Trigger: ATGGCTCTTGTGTTTGCCATCAAGGCAGAAGAGCGGCATAAGGCAGGCCAGTCGGAGGAGGCCATATGCTTGAGGGCACGGGCCCGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS TCA 90 bp | GGCCCAGAAAAAGGACAGCAAGCCAGACAGCAAAACTGGCCAGAATaGGTCTCCGGGCCCGTGCCCTCAAGCATATGGCCTCCTCCGACT | + |
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Preference number: 5 (lower is better) Translates to: GPEKGQQARQQNWPE*VSGPVPSSIWPPPT Trigger: AGTCGGAGGAGGCCATATGCTTGAGGGCACGGGCCCGGAGACTCATTCTGGCCAGTTTTGCTGTCTGGCTTGCTGTCCTTTTTCTGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS CCA 90 bp | ATGAGTCTCCGGGCCCGTGCCCTCAAGCATATGGCCTCCTCCGACTaGCCTGCCTTATGCCGCTCTTCTGCCTTGATGGCAAACACAAGA | + |
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Preference number: 5 (lower is better) Translates to: MSLRARALKHMASSD*PALCRSSALMANTR Trigger: TCTTGTGTTTGCCATCAAGGCAGAAGAGCGGCATAAGGCAGGCCAGTCGGAGGAGGCCATATGCTTGAGGGCACGGGCCCGGAGACTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS TCA 90 bp | AAATATTGGAGGCGGAGCCAGCGGCAGTGGATAGGGGATGGAGAATaGGCAGCTTCCATGTTGCTCACCAAGCTCTCCGCTGCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: KYWRRSQRQWIGDGE*AASMLLTKLSAAFS Trigger: GGAGAAGGCAGCGGAGAGCTTGGTGAGCAACATGGAAGCTGCTCATTCTCCATCCCCTATCCACTGCCGCTGGCTCCGCCTCCAATATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084563.11 ENSMUST00000190278.3 |
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| CDS-3UTR CAA 90 bp | TTCACAGTGGCCAGAGTGATGGAATTCCCTGGAAGTGGAGTTTTGAGCTGCTGGAGTAGCCGCCAAATATaGGAGGCGGAGCCAGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: FTVARVMEFPGSGVLSCWSSRQI*EAEPAA Trigger: TGCCGCTGGCTCCGCCTCCAATATTTGGCGGCTACT...CCAGCAGCTCAAAACTCCACTTCCAGGGAATTCCATCACTCTGGCCACTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190278.3 |
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| CDS-3UTR CAA 90 bp | TTTCATCCCTTTCTCTTAATGGAGGCTCCTAGGATGGAAGGGCAAGGGAGAGAAAGTAGCCGCCAAATATaGGAGGCGGAGCCAGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: FHPFLLMEAPRMEGQGRESSRQI*EAEPAA Trigger: TGCCGCTGGCTCCGCCTCCAATATTTGGCGGCTACT...TTCTCTCCCTTGCCCTTCCATCCTAGGAGCCTCCATTAAGAGAAAGGGATGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS CCA 72 bp | CGGGCCCGTGCCCTCAAGCATATGGCCTCCTCCGACTaGCCTGCCTTATGCCGCTCTTCTGCCTTGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: RARALKHMASSD*PALCRSSALMA Trigger: TGCCATCAAGGCAGAAGAGCGGCATAAGGCAGGCCAGTCGGAGGAGGCCATATGCTTGAGGGCACGGGCCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS GCA 72 bp | CCGTGCCCTCAAGCATATGGCCTCCTCCGACTGGCCTaGCTTATGCCGCTCTTCTGCCTTGATGGCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: PCPQAYGLLRLA*LMPLFCLDGKH Trigger: GTGTTTGCCATCAAGGCAGAAGAGCGGCATAAGGCAGGCCAGTCGGAGGAGGCCATATGCTTGAGGGCACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS TCA 72 bp | AAAGGACAGCAAGCCAGACAGCAAAACTGGCCAGAATaGGTCTCCGGGCCCGTGCCCTCAAGCATATGGCCT | + |
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Preference number: 6 (lower is better) Translates to: KGQQARQQNWPE*VSGPVPSSIWP Trigger: AGGCCATATGCTTGAGGGCACGGGCCCGGAGACTCATTCTGGCCAGTTTTGCTGTCTGGCTTGCTGTCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS GCA 72 bp | CTCAAGCATATGGCCTCCTCCGACTGGCCTGCCTTATaGCGCTCTTCTGCCTTGATGGCAAACACAAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LKHMASSDWPAL*RSSALMANTRA Trigger: GGCTCTTGTGTTTGCCATCAAGGCAGAAGAGCGGCATAAGGCAGGCCAGTCGGAGGAGGCCATATGCTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084563.11 |
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| CDS CCA 72 bp | GAACAGCCACAGATAATGCTAGTAGCCGCCAAATATTaGAGGCGGAGCCAGCGGCAGTGGATAGGGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: EQPQIMLVAAKY*RRSQRQWIGDG Trigger: TCCATCCCCTATCCACTGCCGCTGGCTCCGCCTCCAATATTTGGCGGCTACTAGCATTATCTGTGGCTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084563.11 ENSMUST00000190278.3 |
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