Pregenerated sensors for TMEM263 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060935Ensembl transcript IDs: ENSMUST00000095383.6, ENSMUST00000216771.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTACGAATGCAACTCAGTTGGTACAGTACTTGCCTACTATGCATaGAGCCCTGGGTTCCATCCCCAACATCACATAAAGCAAGCATGG | + |
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Preference number: 1 (lower is better) Translates to: HYECNSVGTVLAYYA*SPGFHPQHHIKQAW Trigger: CCATGCTTGCTTTATGTGATGTTGGGGATGGAACCCAGGGCTGCATGCATAGTAGGCAAGTACTGTACCAACTGAGTTGCATTCGTAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR GCA 90 bp | ACTGTGATTGCCAGTATATTAGAACGCTGTCCGGAAGCGATTATCTaGAGTCCCGCTGCTGTTAACACCAAAAGGAAACTCTGGCAGATG | + |
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Preference number: 1 (lower is better) Translates to: TVIASILERCPEAII*SPAAVNTKRKLWQM Trigger: CATCTGCCAGAGTTTCCTTTTGGTGTTAACAGCAGCGGGACTGCAGATAATCGCTTCCGGACAGCGTTCTAATATACTGGCAATCACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| 3UTR GCA 90 bp | ATTTCACTACGAATGCAACTCAGTTGGTACAGTACTTGCCTACTATaGATGCAGCCCTGGGTTCCATCCCCAACATCACATAAAGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: ISLRMQLSWYSTCLL*MQPWVPSPTSHKAS Trigger: GCTTGCTTTATGTGATGTTGGGGATGGAACCCAGGGCTGCATGCATAGTAGGCAAGTACTGTACCAACTGAGTTGCATTCGTAGTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR GCA 90 bp | AGTCCCGCTGCTGTTAACACCAAAAGGAAACTCTGGCAGATGGTCTaGAAAAACGAGGCAGAGTTAGTGCAGTTAATAGAGCAGTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SPAAVNTKRKLWQMV*KNEAELVQLIEQFP Trigger: TGGAAACTGCTCTATTAACTGCACTAACTCTGCCTCGTTTTTGCAGACCATCTGCCAGAGTTTCCTTTTGGTGTTAACAGCAGCGGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| 3UTR CCA 90 bp | GCGATTATCTGCAGTCCCGCTGCTGTTAACACCAAAAGGAAACTCTaGCAGATGGTCTGCAAAAACGAGGCAGAGTTAGTGCAGTTAATA | + |
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Preference number: 1 (lower is better) Translates to: AIICSPAAVNTKRKL*QMVCKNEAELVQLI Trigger: TATTAACTGCACTAACTCTGCCTCGTTTTTGCAGACCATCTGCCAGAGTTTCCTTTTGGTGTTAACAGCAGCGGGACTGCAGATAATCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| 3UTR GCA 90 bp | TATGAACGAATTTCACTACGAATGCAACTCAGTTGGTACAGTACTTaGCTACTATGCATGCAGCCCTGGGTTCCATCCCCAACATCACAT | + |
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Preference number: 1 (lower is better) Translates to: YERISLRMQLSWYST*LLCMQPWVPSPTSH Trigger: ATGTGATGTTGGGGATGGAACCCAGGGCTGCATGCATAGTAGGCAAGTACTGTACCAACTGAGTTGCATTCGTAGTGAAATTCGTTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR TCA 90 bp | TTTCAACACAGCAGTTTAGCGGTTGACTTGGTTGTAGTCTGTAATTaGACTGTTCAATGCCACTGGCATCATATGCTGTGGAGAGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: FQHSSLAVDLVVVCN*TVQCHWHHMLWRAS Trigger: ACTTGCTCTCCACAGCATATGATGCCAGTGGCATTGAACAGTTCAATTACAGACTACAACCAAGTCAACCGCTAAACTGCTGTGTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095383.6 ENSMUST00000216771.2 |
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| 3UTR TCA 90 bp | CACAACACACTTACCATCCATATCAAAAACCTTCAACTCCCTGCCTaGAACTGGCTTGAGAAATGGTATGTCTACAGCTGCTTTAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: HNTLTIHIKNLQLPA*NWLEKWYVYSCFKG Trigger: CCCTTTAAAGCAGCTGTAGACATACCATTTCTCAAGCCAGTTTCAGGCAGGGAGTTGAAGGTTTTTGATATGGATGGTAAGTGTGTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR CCA 90 bp | AAGAGTTCCAAACATTTGAACCTACATATTCAGGTGATCTTCTTCTaGTCTCAGGAACACTACATTTTGACTTACACCAAGGCACCACTC | + |
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Preference number: 1 (lower is better) Translates to: KSSKHLNLHIQVIFF*SQEHYILTYTKAPL Trigger: GAGTGGTGCCTTGGTGTAAGTCAAAATGTAGTGTTCCTGAGACCAGAAGAAGATCACCTGAATATGTAGGTTCAAATGTTTGGAACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR GCA 90 bp | GTTAGATCAGTCATTCAAGTGGGTCACACAAATTTATCTTCACTGTaGCAAAACTCAAAAATGGAGTCGAATAACAGATACCTCCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: VRSVIQVGHTNLSSL*QNSKMESNNRYLQV Trigger: CACCTGGAGGTATCTGTTATTCGACTCCATTTTTGAGTTTTGGCACAGTGAAGATAAATTTGTGTGACCCACTTGAATGACTGATCTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR TCA 90 bp | ACACACTTACCATCCATATCAAAAACCTTCAACTCCCTGCCTGAAACTGGCTTGAGGCAGGTGAATTTCTaGGTTCGAGGCCAGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: THLPSISKTFNSLPETGLRQVNF*VRGQPD Trigger: ATCAGGCTGGCCTCGAACTCAGAAATTCACCTGCCT...CAAGCCAGTTTCAGGCAGGGAGTTGAAGGTTTTTGATATGGATGGTAAGTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR CAA 90 bp | CTACATATTCAGGTGATCTTCTTCTGGTCTCAGGAACACTACATTTaGACTTACACCAAGGCACCACTCCCTTCCTCTCTCCAGGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LHIQVIFFWSQEHYI*TYTKAPLPSSLQGV Trigger: AACTCCCTGGAGAGAGGAAGGGAGTGGTGCCTTGGTGTAAGTCAAAATGTAGTGTTCCTGAGACCAGAAGAAGATCACCTGAATATGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR GCA 90 bp | TTAGATGCAGCCAGTCACCAATACTTTCAACACAGCAGTTTAGCGGTTGACTTGGCCACTGGCATCATATaGTGTGGAGAGCAAGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: LDAASHQYFQHSSLAVDLATGII*CGEQVY Trigger: GTACACTTGCTCTCCACAGCATATGATGCCAGTGGC...CAAGTCAACCGCTAAACTGCTGTGTTGAAAGTATTGGTGACTGGCTGCATCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095383.6 ENSMUST00000216771.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAAGAACCAGGAGAACCAGAAGCTAAATGTTCAGTTCTTTCAAGAGCTGGGACTGTTCAATGCCACTaGCATCATATGCTGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: CQEPGEPEAKCSVLSRAGTVQCH*HHMLWR Trigger: TCTCCACAGCATATGATGCCAGTGGCATTGAACAGT...CCCAGCTCTTGAAAGAACTGAACATTTAGCTTCTGGTTCTCCTGGTTCTTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| 3UTR-3UTR TCA 90 bp | TTACCATCCATATCAAAAACCTTCAACTCCCTGCCTGAAACTGGCTTGAGAAATAGCACTCTTACCCACTaGCACCAGGAAACTCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LPSISKTFNSLPETGLRNSTLTH*HQETPL Trigger: TAAAGGAGTTTCCTGGTGTCAGTGGGTAAGAGTGCT...ATTTCTCAAGCCAGTTTCAGGCAGGGAGTTGAAGGTTTTTGATATGGATGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR CCA 90 bp | TTACCATCCATATCAAAAACCTTCAACTCCCTGCCTGAAACTGGCTTGAGAAATCTTAAGCCCAGCACTTaGGAGGTGAGTGCAGAATTA | + |
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Preference number: 2 (lower is better) Translates to: LPSISKTFNSLPETGLRNLKPST*EVSAEL Trigger: TAATTCTGCACTCACCTCCCAAGTGCTGGGCTTAAG...ATTTCTCAAGCCAGTTTCAGGCAGGGAGTTGAAGGTTTTTGATATGGATGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR GCA 90 bp | CTGAACAAGTGTAACATTTTACCAGATAAAAAGCTGAACTTAGGGATGAGAAGCGCCACTGGCATCATATaGTGTGGAGAGCAAGTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: LNKCNILPDKKLNLGMRSATGII*CGEQVY Trigger: GTACACTTGCTCTCCACAGCATATGATGCCAGTGGC...GCTTCTCATCCCTAAGTTCAGCTTTTTATCTGGTAAAATGTTACACTTGTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGACTCAGGTATATAGCTGTACACATCATCAAATGGCAAGTTCATTTCAGACTGTTCAATGCCACTaGCATCATATGCTGTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: EGTQVYSCTHHQMASSFQTVQCH*HHMLWR Trigger: TCTCCACAGCATATGATGCCAGTGGCATTGAACAGT...CTGAAATGAACTTGCCATTTGATGATGTGTACAGCTATATACCTGAGTCCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGACTCAGGTATATAGCTGTACACATCATCAAATGGCAAGTTCATTTCAGGTTGTAGTCTGTAATTaGACTGTTCAATGCCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: EGTQVYSCTHHQMASSFQVVVCN*TVQCHW Trigger: CCAGTGGCATTGAACAGTTCAATTACAGACTACAAC...CTGAAATGAACTTGCCATTTGATGATGTGTACAGCTATATACCTGAGTCCCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAGAACCAGGAGAACCAGAAGCTAAATGTTCAGTTCTTTCAAGAGCTGGGTCTTCTTGTTTTAGATaGAGCCAGTCACCAATACTT | + |
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Preference number: 2 (lower is better) Translates to: CQEPGEPEAKCSVLSRAGSSCFR*SQSPIL Trigger: AAGTATTGGTGACTGGCTGCATCTAAAACAAGAAGA...CCCAGCTCTTGAAAGAACTGAACATTTAGCTTCTGGTTCTCCTGGTTCTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGTATGTCTACAGCTGCTTTAAAGGGCTATAAGAGAACATGTTTTAAAGCTAGTTCAAGACCAGCCTaGGCTTTAGAAGACCCCATC | + |
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Preference number: 2 (lower is better) Translates to: NGMSTAALKGYKRTCFKASSRPA*ALEDPI Trigger: GATGGGGTCTTCTAAAGCCCAGGCTGGTCTTGAACT...AGCTTTAAAACATGTTCTCTTATAGCCCTTTAAAGCAGCTGTAGACATACCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR GCA 90 bp | AATGGTATGTCTACAGCTGCTTTAAAGGGCTATAAGAGAACATGTTTTAAAGCTCACTTGGGAGGTGAGTaGAGAATTAGAAGCGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: NGMSTAALKGYKRTCFKAHLGGE*RIRSAR Trigger: TCTTGCGCTTCTAATTCTGCACTCACCTCCCAAGTG...AGCTTTAAAACATGTTCTCTTATAGCCCTTTAAAGCAGCTGTAGACATACCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR GCA 90 bp | AATGGTATGTCTACAGCTGCTTTAAAGGGCTATAAGAGAACATGTTTTAAAGCTAAGCATGGTATCTCATaGCTTAAGCCCAGCACTTGG | + |
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Preference number: 2 (lower is better) Translates to: NGMSTAALKGYKRTCFKAKHGIS*LKPSTW Trigger: CCAAGTGCTGGGCTTAAGGCATGAGATACCATGCTT...AGCTTTAAAACATGTTCTCTTATAGCCCTTTAAAGCAGCTGTAGACATACCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR TCA 90 bp | TGGGTGCTTCTAGAGGAAGAAACCTACGTTGAAGAGATTGCAAATATTTTGAAAGTTGTAGTCTGTAATTaGACTGTTCAATGCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: WVLLEEETYVEEIANILKVVVCN*TVQCHW Trigger: CCAGTGGCATTGAACAGTTCAATTACAGACTACAAC...TTTCAAAATATTTGCAATCTCTTCAACGTAGGTTTCTTCCTCTAGAAGCACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| 3UTR CAA 90 bp | GTGCTTCTAGAGGAAGAAACCTACGTTGAAGAGATTGCAAATATTTaGAAAGAACTAGGTGCCAATAAAACTGTGATTGCCAGTATATTA | + |
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Preference number: 2 (lower is better) Translates to: VLLEEETYVEEIANI*KELGANKTVIASIL Trigger: TAATATACTGGCAATCACAGTTTTATTGGCACCTAGTTCTTTCAAAATATTTGCAATCTCTTCAACGTAGGTTTCTTCCTCTAGAAGCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| 3UTR GCA 72 bp | CGAATGCAACTCAGTTGGTACAGTACTTGCCTACTATaGATGCAGCCCTGGGTTCCATCCCCAACATCACAT | + |
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Preference number: 3 (lower is better) Translates to: RMQLSWYSTCLL*MQPWVPSPTSH Trigger: ATGTGATGTTGGGGATGGAACCCAGGGCTGCATGCATAGTAGGCAAGTACTGTACCAACTGAGTTGCATTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR CCA 72 bp | TGCAGTCCCGCTGCTGTTAACACCAAAAGGAAACTCTaGCAGATGGTCTGCAAAAACGAGGCAGAGTTAGTG | + |
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Preference number: 3 (lower is better) Translates to: CSPAAVNTKRKL*QMVCKNEAELV Trigger: CACTAACTCTGCCTCGTTTTTGCAGACCATCTGCCAGAGTTTCCTTTTGGTGTTAACAGCAGCGGGACTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| 3UTR GCA 72 bp | TGCAACTCAGTTGGTACAGTACTTGCCTACTATGCATaGAGCCCTGGGTTCCATCCCCAACATCACATAAAG | + |
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Preference number: 3 (lower is better) Translates to: CNSVGTVLAYYA*SPGFHPQHHIK Trigger: CTTTATGTGATGTTGGGGATGGAACCCAGGGCTGCATGCATAGTAGGCAAGTACTGTACCAACTGAGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR GCA 72 bp | GCCAGTATATTAGAACGCTGTCCGGAAGCGATTATCTaGAGTCCCGCTGCTGTTAACACCAAAAGGAAACTC | + |
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Preference number: 3 (lower is better) Translates to: ASILERCPEAII*SPAAVNTKRKL Trigger: GAGTTTCCTTTTGGTGTTAACAGCAGCGGGACTGCAGATAATCGCTTCCGGACAGCGTTCTAATATACTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| 3UTR CCA 72 bp | AGTTGGTACAGTACTTGCCTACTATGCATGCAGCCCTaGGTTCCATCCCCAACATCACATAAAGCAAGCATG | + |
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Preference number: 3 (lower is better) Translates to: SWYSTCLLCMQP*VPSPTSHKASM Trigger: CATGCTTGCTTTATGTGATGTTGGGGATGGAACCCAGGGCTGCATGCATAGTAGGCAAGTACTGTACCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR TCA 72 bp | CTTACCATCCATATCAAAAACCTTCAACTCCCTGCCTaGAACTGGCTTGAGAAATGGTATGTCTACAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LTIHIKNLQLPA*NWLEKWYVYSC Trigger: GCAGCTGTAGACATACCATTTCTCAAGCCAGTTTCAGGCAGGGAGTTGAAGGTTTTTGATATGGATGGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR CAA 90 bp | GAAGGGACTCAGGTATATAGCTGTACACATCATCAAATGGCAAGTTCATTTCAGCTGCCTGAAACTGGCTaGAGAAATGGTATGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: EGTQVYSCTHHQMASSFQLPETG*RNGMST Trigger: TGTAGACATACCATTTCTCAAGCCAGTTTCAGGCAG...CTGAAATGAACTTGCCATTTGATGATGTGTACAGCTATATACCTGAGTCCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR CAA 90 bp | GAAGGGACTCAGGTATATAGCTGTACACATCATCAAATGGCAAGTTCATTTCAGAGAACATCTGTAGATTaGCTTGACAGTCCTGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: EGTQVYSCTHHQMASSFQRTSVD*LDSPAV Trigger: AACAGCAGGACTGTCAAGCAAATCTACAGATGTTCT...CTGAAATGAACTTGCCATTTGATGATGTGTACAGCTATATACCTGAGTCCCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR GCA 72 bp | GTCATTCAAGTGGGTCACACAAATTTATCTTCACTGTaGCAAAACTCAAAAATGGAGTCGAATAACAGATAC | + |
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Preference number: 3 (lower is better) Translates to: VIQVGHTNLSSL*QNSKMESNNRY Trigger: GTATCTGTTATTCGACTCCATTTTTGAGTTTTGGCACAGTGAAGATAAATTTGTGTGACCCACTTGAATGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| 3UTR-3UTR CAA 90 bp | AATGGTATGTCTACAGCTGCTTTAAAGGGCTATAAGAGAACATGTTTTAAAGCTGCCCATCTCATTCATTaGAAGAGTCAATCCTCATAT | + |
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Preference number: 3 (lower is better) Translates to: NGMSTAALKGYKRTCFKAAHLIH*KSQSSY Trigger: ATATGAGGATTGACTCTTCAAATGAATGAGATGGGC...AGCTTTAAAACATGTTCTCTTATAGCCCTTTAAAGCAGCTGTAGACATACCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| CDS-3UTR CCA 90 bp | GCACATCAAAGGTACAGTTTATGTAGTTCGAGTCCCTTTGTAAGGGTCGTGTGGCCACACCACCAATGGTaGCACCAACAGCTCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: AHQRYSLCSSSPFVRVVWPHHQW*HQQLPL Trigger: CAAAGGGAGCTGTTGGTGCCACCATTGGTGGTGTGG...CCACACGACCCTTACAAAGGGACTCGAACTACATAAACTGTACCTTTGATGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| CDS-3UTR CCA 90 bp | TGTCAAGAACCAGGAGAACCAGAAGCTAAATGTTCAGTTCTTTCAAGAGCTGGGCCACACCACCAATGGTaGCACCAACAGCTCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: CQEPGEPEAKCSVLSRAGPHHQW*HQQLPL Trigger: CAAAGGGAGCTGTTGGTGCCACCATTGGTGGTGTGG...CCCAGCTCTTGAAAGAACTGAACATTTAGCTTCTGGTTCTCCTGGTTCTTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| CDS-3UTR TCA 90 bp | ACACACTTACCATCCATATCAAAAACCTTCAACTCCCTGCCTGAAACTGGCTTGCGGGTGATCTTTCATTaGCCCTTCTGGGGGTTCATC | + |
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Preference number: 4 (lower is better) Translates to: THLPSISKTFNSLPETGLRVIFH*PFWGFI Trigger: GATGAACCCCCAGAAGGGTCAATGAAAGATCACCCG...CAAGCCAGTTTCAGGCAGGGAGTTGAAGGTTTTTGATATGGATGGTAAGTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| CDS-3UTR TCA 90 bp | AAAAACGAGGCAGAGTTAGTGCAGTTAATAGAGCAGTTTCCAGAATCTTTCTTTGGCTGCTGCTGCGGGTaGTCTTTCATTGACCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KNEAELVQLIEQFPESFFGCCCG*SFIDPS Trigger: AGAAGGGTCAATGAAAGATCACCCGCAGCAGCAGCC...AAAGAAAGATTCTGGAAACTGCTCTATTAACTGCACTAACTCTGCCTCGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| CDS-3UTR GCA 90 bp | ACACACTTACCATCCATATCAAAAACCTTCAACTCCCTGCCTGAAACTGGCTTGCACTTTGTTTACAACTaGAGACCCAACAGCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: THLPSISKTFNSLPETGLHFVYN*RPNSCH Trigger: GTGACAGCTGTTGGGTCTGCAGTTGTAAACAAAGTG...CAAGCCAGTTTCAGGCAGGGAGTTGAAGGTTTTTGATATGGATGGTAAGTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| CDS-3UTR GCA 90 bp | TTAGATGCAGCCAGTCACCAATACTTTCAACACAGCAGTTTAGCGGTTGACTTGCACTTTGTTTACAACTaGAGACCCAACAGCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LDAASHQYFQHSSLAVDLHFVYN*RPNSCH Trigger: GTGACAGCTGTTGGGTCTGCAGTTGTAAACAAAGTG...CAAGTCAACCGCTAAACTGCTGTGTTGAAAGTATTGGTGACTGGCTGCATCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095383.6 ENSMUST00000216771.2 |
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| CDS-3UTR TCA 90 bp | TGGGTGCTTCTAGAGGAAGAAACCTACGTTGAAGAGATTGCAAATATTTTGAAACGGGTGATCTTTCATTaGCCCTTCTGGGGGTTCATC | + |
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Preference number: 4 (lower is better) Translates to: WVLLEEETYVEEIANILKRVIFH*PFWGFI Trigger: GATGAACCCCCAGAAGGGTCAATGAAAGATCACCCG...TTTCAAAATATTTGCAATCTCTTCAACGTAGGTTTCTTCCTCTAGAAGCACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| CDS-3UTR TCA 90 bp | AATGGTATGTCTACAGCTGCTTTAAAGGGCTATAAGAGAACATGTTTTAAAGCTGGCTGCTGCTGCGGGTaGTCTTTCATTGACCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NGMSTAALKGYKRTCFKAGCCCG*SFIDPS Trigger: AGAAGGGTCAATGAAAGATCACCCGCAGCAGCAGCC...AGCTTTAAAACATGTTCTCTTATAGCCCTTTAAAGCAGCTGTAGACATACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| CDS-3UTR CAA 90 bp | CACCAAAAGGAAACTCTGGCAGATGGTCTGCAAAAACGAGGCAGAGTTAGTGCAGCGGGTGATCTTTCATaGACCCTTCTGGGGGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: HQKETLADGLQKRGRVSAAGDLS*TLLGVH Trigger: ATGAACCCCCAGAAGGGTCAATGAAAGATCACCCGC...TGCACTAACTCTGCCTCGTTTTTGCAGACCATCTGCCAGAGTTTCCTTTTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| CDS TCA 90 bp | CACACGAGACAACATTCCTGGCTGCTGCTGCGGGTGATCTTTCATTaGCCCTTCTGGGGGTTCATCACTAAGGTAAGATGGAATTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: HTRQHSWLLLRVIFH*PFWGFITKVRWNFL Trigger: CAAGAAATTCCATCTTACCTTAGTGATGAACCCCCAGAAGGGTCAATGAAAGATCACCCGCAGCAGCAGCCAGGAATGTTGTCTCGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095383.6 ENSMUST00000216771.2 |
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| CDS-3UTR CAA 90 bp | ATATTAGAACGCTGTCCGGAAGCGATTATCTGCAGTCCCGCTGCTGTTAACACCCCTGATAAGGGCACTTaGTTTACAACTGCAGACCCA | + |
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Preference number: 5 (lower is better) Translates to: ILERCPEAIICSPAAVNTPDKGT*FTTADP Trigger: TGGGTCTGCAGTTGTAAACAAAGTGCCCTTATCAGG...GGTGTTAACAGCAGCGGGACTGCAGATAATCGCTTCCGGACAGCGTTCTAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216771.2 |
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| CDS-3UTR CAA 90 bp | GCCAGTCACCAATACTTTCAACACAGCAGTTTAGCGGTTGACTTGGTTGTAGTCCCTGATAAGGGCACTTaGTTTACAACTGCAGACCCA | + |
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Preference number: 5 (lower is better) Translates to: ASHQYFQHSSLAVDLVVVPDKGT*FTTADP Trigger: TGGGTCTGCAGTTGTAAACAAAGTGCCCTTATCAGG...GACTACAACCAAGTCAACCGCTAAACTGCTGTGTTGAAAGTATTGGTGACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095383.6 ENSMUST00000216771.2 |
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| CDS-3UTR CAA 90 bp | TTACCATCCATATCAAAAACCTTCAACTCCCTGCCTGAAACTGGCTTGAGAAATGCGGGTGATCTTTCATaGACCCTTCTGGGGGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: LPSISKTFNSLPETGLRNAGDLS*TLLGVH Trigger: ATGAACCCCCAGAAGGGTCAATGAAAGATCACCCGC...ATTTCTCAAGCCAGTTTCAGGCAGGGAGTTGAAGGTTTTTGATATGGATGGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095383.6 |
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| CDS TCA 72 bp | GTCACACGAGACAACATTCCTGGCTGCTGCTGCGGGTaGTCTTTCATTGACCCTTCTGGGGGTTCATCACTA | + |
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Preference number: 6 (lower is better) Translates to: VTRDNIPGCCCG*SFIDPSGGSSL Trigger: TAGTGATGAACCCCCAGAAGGGTCAATGAAAGATCACCCGCAGCAGCAGCCAGGAATGTTGTCTCGTGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095383.6 ENSMUST00000216771.2 |
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| CDS TCA 72 bp | CAACATTCCTGGCTGCTGCTGCGGGTGATCTTTCATTaGCCCTTCTGGGGGTTCATCACTAAGGTAAGATGG | + |
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Preference number: 6 (lower is better) Translates to: QHSWLLLRVIFH*PFWGFITKVRW Trigger: CCATCTTACCTTAGTGATGAACCCCCAGAAGGGTCAATGAAAGATCACCCGCAGCAGCAGCCAGGAATGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095383.6 ENSMUST00000216771.2 |
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| CDS CAA 72 bp | TCAGACTTGTCTTTCTTCTTTCCTGATAAGGGCACTTaGTTTACAACTGCAGACCCAACAGCTGTCACACCT | + |
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Preference number: 6 (lower is better) Translates to: SDLSFFFPDKGT*FTTADPTAVTP Trigger: AGGTGTGACAGCTGTTGGGTCTGCAGTTGTAAACAAAGTGCCCTTATCAGGAAAGAAGAAAGACAAGTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095383.6 ENSMUST00000216771.2 |
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