Pregenerated sensors for TMEM262 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047733Ensembl transcript IDs: ENSMUST00000143303.2, ENSMUST00000149347.8
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR TCA 90 bp | ACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCCCATCTCTGCGTAGAGTaGCCCCATGGCAGCCCAGCC | + |
Preference number: 4 (lower is better) Translates to: TLLNLLKQLFPSPVLVLSHLCVE*PHGSPA Trigger: GGCTGGGCTGCCATGGGGTCACTCTACGCAGAGATG...GGACAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS-3UTR TCA 90 bp | ACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCCCAGCCCAGCCGATGCTaGTCACCTGGGAGAATATCA | + |
Preference number: 4 (lower is better) Translates to: TLLNLLKQLFPSPVLVLSQPSRC*SPGRIS Trigger: TGATATTCTCCCAGGTGATCAGCATCGGCTGGGCTG...GGACAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS-3UTR TCA 90 bp | CAGACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCTCCTCTCGGTAATTaGTGGCCAGAAACTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: QTLLNLLKQLFPSPVLVLSPLGN*WPETPG Trigger: GCCTGGAGTTTCTGGCCATCAATTACCGAGAGGAGA...CAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS-3UTR GCA 90 bp | ACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCCGAAGAAGAGTATAAGTaGGGCTACAGTGAGCATCAG | + |
Preference number: 4 (lower is better) Translates to: TLLNLLKQLFPSPVLVLSEEEYK*GYSEHQ Trigger: CTGATGCTCACTGTAGCCGCACTTATACTCTTCTTC...GGACAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS TCA 90 bp | CGGTCATCTCTGCGTAGAGTGACCCCATGGCAGCCCAGCCGATGCTaGTCACCTGGGAGAATATCAGTACAACCGTGTAACGGAAGCTCA | + |
Preference number: 5 (lower is better) Translates to: RSSLRRVTPWQPSRC*SPGRISVQPCNGSS Trigger: TGAGCTTCCGTTACACGGTTGTACTGATATTCTCCCAGGTGATCAGCATCGGCTGGGCTGCCATGGGGTCACTCTACGCAGAGATGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS TCA 90 bp | AGCAAAGCATCTAAGAAACTTGTCACCGGTCATCTCTGCGTAGAGTaGCCCCATGGCAGCCCAGCCGATGCTGATCACCTGGGAGAATAT | + |
Preference number: 5 (lower is better) Translates to: SKASKKLVTGHLCVE*PHGSPADADHLGEY Trigger: ATATTCTCCCAGGTGATCAGCATCGGCTGGGCTGCCATGGGGTCACTCTACGCAGAGATGACCGGTGACAAGTTTCTTAGATGCTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS-3UTR CAA 90 bp | CAACAGACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCTCCAGGCACAGGCGGTaGAAGAACATGGCTCCATTG | + |
Preference number: 5 (lower is better) Translates to: QQTLLNLLKQLFPSPVLVSRHRR*KNMAPL Trigger: CAATGGAGCCATGTTCTTCAACCGCCTGTGCCTGGA...GACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGTCTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS-3UTR CAA 90 bp | ACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCCAAGCATCTAAGAAACTaGTCACCGGTCATCTCTGCG | + |
Preference number: 5 (lower is better) Translates to: TLLNLLKQLFPSPVLVLSKHLRN*SPVISA Trigger: CGCAGAGATGACCGGTGACAAGTTTCTTAGATGCTT...GGACAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS-3UTR CAA 90 bp | CAACAGACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCAAGAACATGGCTCCATaGAGGATCAGAATGGTCAAA | + |
Preference number: 5 (lower is better) Translates to: QQTLLNLLKQLFPSPVLVKNMAP*RIRMVK Trigger: TTTGACCATTCTGATCCTCAATGGAGCCATGTTCTT...GACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGTCTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS TCA 72 bp | CTGCGTAGAGTGACCCCATGGCAGCCCAGCCGATGCTaGTCACCTGGGAGAATATCAGTACAACCGTGTAAC | + |
Preference number: 6 (lower is better) Translates to: LRRVTPWQPSRC*SPGRISVQPCN Trigger: GTTACACGGTTGTACTGATATTCTCCCAGGTGATCAGCATCGGCTGGGCTGCCATGGGGTCACTCTACGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS TCA 72 bp | TCTAAGAAACTTGTCACCGGTCATCTCTGCGTAGAGTaGCCCCATGGCAGCCCAGCCGATGCTGATCACCTG | + |
Preference number: 6 (lower is better) Translates to: SKKLVTGHLCVE*PHGSPADADHL Trigger: CAGGTGATCAGCATCGGCTGGGCTGCCATGGGGTCACTCTACGCAGAGATGACCGGTGACAAGTTTCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |
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CDS CAA 72 bp | AACTCCAGGCACAGGCGGTTGAAGAACATGGCTCCATaGAGGATATCAGTACAACCGTGTAACGGAAGCTCA | + |
Preference number: 6 (lower is better) Translates to: NSRHRRLKNMAP*RISVQPCNGSS Trigger: TGAGCTTCCGTTACACGGTTGTACTGATATCCTCAATGGAGCCATGTTCTTCAACCGCCTGTGCCTGGAGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149347.8 |
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CDS CAA 72 bp | AACTCCAGGCACAGGCGGTTGAAGAACATGGCTCCATaGAGGATCAGAATGGTCAAAGCAAAGCATCTAAGA | + |
Preference number: 6 (lower is better) Translates to: NSRHRRLKNMAP*RIRMVKAKHLR Trigger: TCTTAGATGCTTTGCTTTGACCATTCTGATCCTCAATGGAGCCATGTTCTTCAACCGCCTGTGCCTGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143303.2 |