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Pregenerated sensors for TMEM262 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047733

Ensembl transcript IDs: ENSMUST00000143303.2, ENSMUST00000149347.8

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp ACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCCCATCTCTGCGTAGAGTaGCCCCATGGCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TLLNLLKQLFPSPVLVLSHLCVE*PHGSPA
Trigger: GGCTGGGCTGCCATGGGGTCACTCTACGCAGAGATG...GGACAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS-3UTR TCA 90 bp ACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCCCAGCCCAGCCGATGCTaGTCACCTGGGAGAATATCA +
Preference number: 4 (lower is better)
Translates to: TLLNLLKQLFPSPVLVLSQPSRC*SPGRIS
Trigger: TGATATTCTCCCAGGTGATCAGCATCGGCTGGGCTG...GGACAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS-3UTR TCA 90 bp CAGACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCTCCTCTCGGTAATTaGTGGCCAGAAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QTLLNLLKQLFPSPVLVLSPLGN*WPETPG
Trigger: GCCTGGAGTTTCTGGCCATCAATTACCGAGAGGAGA...CAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS-3UTR GCA 90 bp ACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCCGAAGAAGAGTATAAGTaGGGCTACAGTGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: TLLNLLKQLFPSPVLVLSEEEYK*GYSEHQ
Trigger: CTGATGCTCACTGTAGCCGCACTTATACTCTTCTTC...GGACAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS TCA 90 bp CGGTCATCTCTGCGTAGAGTGACCCCATGGCAGCCCAGCCGATGCTaGTCACCTGGGAGAATATCAGTACAACCGTGTAACGGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: RSSLRRVTPWQPSRC*SPGRISVQPCNGSS
Trigger: TGAGCTTCCGTTACACGGTTGTACTGATATTCTCCCAGGTGATCAGCATCGGCTGGGCTGCCATGGGGTCACTCTACGCAGAGATGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS TCA 90 bp AGCAAAGCATCTAAGAAACTTGTCACCGGTCATCTCTGCGTAGAGTaGCCCCATGGCAGCCCAGCCGATGCTGATCACCTGGGAGAATAT +
Preference number: 5 (lower is better)
Translates to: SKASKKLVTGHLCVE*PHGSPADADHLGEY
Trigger: ATATTCTCCCAGGTGATCAGCATCGGCTGGGCTGCCATGGGGTCACTCTACGCAGAGATGACCGGTGACAAGTTTCTTAGATGCTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS-3UTR CAA 90 bp CAACAGACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCTCCAGGCACAGGCGGTaGAAGAACATGGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: QQTLLNLLKQLFPSPVLVSRHRR*KNMAPL
Trigger: CAATGGAGCCATGTTCTTCAACCGCCTGTGCCTGGA...GACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGTCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS-3UTR CAA 90 bp ACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCCTGTCCAAGCATCTAAGAAACTaGTCACCGGTCATCTCTGCG +
Preference number: 5 (lower is better)
Translates to: TLLNLLKQLFPSPVLVLSKHLRN*SPVISA
Trigger: CGCAGAGATGACCGGTGACAAGTTTCTTAGATGCTT...GGACAGGACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS-3UTR CAA 90 bp CAACAGACTTTATTAAACCTTCTGAAGCAGCTTTTTCCATCTCCCGTCTTAGTCAAGAACATGGCTCCATaGAGGATCAGAATGGTCAAA +
Preference number: 5 (lower is better)
Translates to: QQTLLNLLKQLFPSPVLVKNMAP*RIRMVK
Trigger: TTTGACCATTCTGATCCTCAATGGAGCCATGTTCTT...GACTAAGACGGGAGATGGAAAAAGCTGCTTCAGAAGGTTTAATAAAGTCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS TCA 72 bp CTGCGTAGAGTGACCCCATGGCAGCCCAGCCGATGCTaGTCACCTGGGAGAATATCAGTACAACCGTGTAAC +
Preference number: 6 (lower is better)
Translates to: LRRVTPWQPSRC*SPGRISVQPCN
Trigger: GTTACACGGTTGTACTGATATTCTCCCAGGTGATCAGCATCGGCTGGGCTGCCATGGGGTCACTCTACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS TCA 72 bp TCTAAGAAACTTGTCACCGGTCATCTCTGCGTAGAGTaGCCCCATGGCAGCCCAGCCGATGCTGATCACCTG +
Preference number: 6 (lower is better)
Translates to: SKKLVTGHLCVE*PHGSPADADHL
Trigger: CAGGTGATCAGCATCGGCTGGGCTGCCATGGGGTCACTCTACGCAGAGATGACCGGTGACAAGTTTCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2
CDS CAA 72 bp AACTCCAGGCACAGGCGGTTGAAGAACATGGCTCCATaGAGGATATCAGTACAACCGTGTAACGGAAGCTCA +
Preference number: 6 (lower is better)
Translates to: NSRHRRLKNMAP*RISVQPCNGSS
Trigger: TGAGCTTCCGTTACACGGTTGTACTGATATCCTCAATGGAGCCATGTTCTTCAACCGCCTGTGCCTGGAGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149347.8
CDS CAA 72 bp AACTCCAGGCACAGGCGGTTGAAGAACATGGCTCCATaGAGGATCAGAATGGTCAAAGCAAAGCATCTAAGA +
Preference number: 6 (lower is better)
Translates to: NSRHRRLKNMAP*RIRMVKAKHLR
Trigger: TCTTAGATGCTTTGCTTTGACCATTCTGATCCTCAATGGAGCCATGTTCTTCAACCGCCTGTGCCTGGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143303.2