Pregenerated sensors for TMEM259 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013858Ensembl transcript IDs: ENSMUST00000052885.14, ENSMUST00000124536.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTaGAGACCACAGCTCTCTTGGGCTCGGGCCGCGGCTCCACTGGGA | + |
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Preference number: 1 (lower is better) Translates to: PVPAASRTFATSPSP*RPQLSWARAAAPLG Trigger: TCCCAGTGGAGCCGCGGCCCGAGCCCAAGAGAGCTGTGGTCTGCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| 3UTR-3UTR CCA 90 bp | ACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCGTGAGACCACAGCTCTCTTaGGCTCGGGCCGCGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TRLCTLQLNSVERVPRIVRPQLS*ARAAAP Trigger: TGGAGCCGCGGCCCGAGCCCAAGAGAGCTGTGGTCT...CACGATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| 3UTR-3UTR GCA 90 bp | ACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCGTGACCAGCCCCTCTCCCTaGAGACCACAGCTCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: TRLCTLQLNSVERVPRIVTSPSP*RPQLSW Trigger: CCAAGAGAGCTGTGGTCTGCAGGGAGAGGGGCTGGT...CACGATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| 3UTR CCA 72 bp | GCGCTCGGCCCCGTGCGGGCGCCGTGTGGAAGGCACTaGGGAGCACCAGGCGGCCGATGGCCTCGTGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: ALGPVRAPCGRH*GAPGGRWPRAH Trigger: ATGGGCACGAGGCCATCGGCCGCCTGGTGCTCCCCAGTGCCTTCCACACGGCGCCCGCACGGGGCCGAGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| 3UTR-3UTR CAA 90 bp | ACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCGTGCAGACCACAGCTCTCTaGGGCTCGGGCCGCGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: TRLCTLQLNSVERVPRIVQTTAL*GSGRGS Trigger: GGAGCCGCGGCCCGAGCCCAAGAGAGCTGTGGTCTG...CACGATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | GCACCAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCCAGATGCCCCGCCAGTaGGCGCGGGGCTGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: APGGRWPRAHRRPVPAASQMPRQ*ARGWSW Trigger: CCAGCTCCAGCCCCGCGCCCACTGGCGGGGCATCTG...GGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTGGTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | CAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCAGAACCCGGGGCCCAGCGGTaGCGTCTGAAGCAGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: QAADGLVPIAALSRPLPEPGAQR*RLKQHL Trigger: GAGATGCTGCTTCAGACGCCACCGCTGGGCCCCGGG...TTCTGGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR TCA 90 bp | GCACCAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCGCGCCATCCACATGCTaGCAAAGCGGTAGTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: APGGRWPRAHRRPVPAASAPSTC*QSGSAP Trigger: GGGAGCACTACCGCTTTGTCAGCATGTGGATGGCGC...GGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTGGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR TCA 90 bp | CGCCGCCCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTGCAGGATGCGTCAGAGATaGTGGCGGCGGTCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RRPVPAASRTFATSPSPCRMRQR*WRRSRP Trigger: TGGCCGAGACCGCCGCCATCATCTCTGACGCATCCT...GCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGGGCGGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | GCACCAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCTTGAAGAAGAGAGCGTaGAAGAGCCGGTCGCGCACG | + |
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Preference number: 4 (lower is better) Translates to: APGGRWPRAHRRPVPAASLKKRA*KSRSRT Trigger: CGTGCGCGACCGGCTCTTCCACGCTCTCTTCTTCAA...GGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTGGTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR TCA 90 bp | CCAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCAGAGCAGCAGGTCCACGATaGAGACGAAGATCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PGGRWPRAHRRPVPAASRAAGPR*RRRSGG Trigger: ACCACCAGATCTTCGTCTTCATCGTGGACCTGCTGC...TCTGGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | CGCCCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTGCAGAGGCTGGGATCCGGAGTaGCAGGGGAGCCAGAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RPVPAASRTFATSPSPCRGWDPE*QGSQSC Trigger: ACAACTCTGGCTCCCCTGCCACTCCGGATCCCAGCC...TCTGCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR TCA 90 bp | CGCCCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTGCAGAAGCCAGAGTTGTTGTTaGGGTCGTCAGGCAGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: RPVPAASRTFATSPSPCRSQSCC*GRQAAP Trigger: CGGCGCTGCCTGACGACCTCAACAACAACTCTGGCT...TCTGCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR GCA 90 bp | GCACCAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCTTCATCTCCAGCATCTaGAGCAGGTCCACGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: APGGRWPRAHRRPVPAASFISSI*SRSTMK Trigger: CTTCATCGTGGACCTGCTGCAGATGCTGGAGATGAA...GGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR GCA 90 bp | CGCCGCCCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTGCAAGAACCTCAGCCAGTaGCGCTTGCTGGTGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RRPVPAASRTFATSPSPCKNLSQ*RLLVLV Trigger: CACCAACACCAGCAAGCGGCACTGGCTGAGGTTCTT...GCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGGGCGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | CGCCGCCCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTGCATCTGCACCGCTCTGTaGCTTGAACACCTTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RRPVPAASRTFATSPSPCICTAL*LEHLGL Trigger: GAGCCCAAGGTGTTCAAGCCACAGAGCGGTGCAGAT...GCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGGGCGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | GCACCAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCAAGACGAAGATCTGGTaGTGCGAGTATCGCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: APGGRWPRAHRRPVPAASKTKIW*CEYRNS Trigger: GCTGTTGCGATACTCGCACCACCAGATCTTCGTCTT...GGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | CAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCAGAATGGTGTGGCAGCAGATaGCATCATACTGGTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QAADGLVPIAALSRPLPEWCGSR*HHTGRP Trigger: TGGCCGACCAGTATGATGCCATCTGCTGCCACACCA...TTCTGGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | CGCCCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTGCAGAGGATCTGCTGCAGGATaGCGGGCAACTCATAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RPVPAASRTFATSPSPCRGSAAG*RATHSG Trigger: ACCACTATGAGTTGCCCGCCATCCTGCAGCAGATCC...TCTGCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | CGCCCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTGCAGAGGAAAAGGGAAGTCCTaGCTGTCGTTCAGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: RPVPAASRTFATSPSPCRGKGKS*LSFRAS Trigger: AGATGCCCTGAACGACAGCCAGGACTTCCCTTTTCC...TCTGCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | ACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCGTGGCCCGGCTCGAGTTGTaGCGCACCTCCACCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TRLCTLQLNSVERVPRIVARLEL*RTSTRR Trigger: CCTGCGGGTGGAGGTGCGCCACAACTCGAGCCGGGC...CACGATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | ACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCGTGCGGTCCCCAAAGCACTaGTCCCGCGTGGGGTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: TRLCTLQLNSVERVPRIVRSPKH*SRVGSR Trigger: CCTAGACCCCACGCGGGACCAGTGCTTTGGGGACCG...CACGATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR GCA 90 bp | ACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCGTGTCAGCCAGTGCCGCTTaGTGGTGTTGGTGTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TRLCTLQLNSVERVPRIVSASAA*WCWCGS Trigger: GCTGCCACACCAACACCAGCAAGCGGCACTGGCTGA...CACGATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | ACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCGTGGCCGCTTGCTGGTGTTaGTGTGGCAGCAGATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TRLCTLQLNSVERVPRIVAACWC*CGSRWH Trigger: ATGCCATCTGCTGCCACACCAACACCAGCAAGCGGC...CACGATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | CAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCCTGCGGGGAAGGCGATaGCCATGTTCATCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QTRLCTLQLNSVERVPRILRGRR*PCSSPA Trigger: TGCTGGAGATGAACATGGCCATCGCCTTCCCCGCAG...GATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | ACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCGTGTTGCTGGTGTTGGTGTaGCAGCAGATGGCATCATAC | + |
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Preference number: 4 (lower is better) Translates to: TRLCTLQLNSVERVPRIVLLVLV*QQMASY Trigger: GTATGATGCCATCTGCTGCCACACCAACACCAGCAA...CACGATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | GTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATGCGCGAGGGGAGGGCTaGGATCCGGAGTGGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VHDSLFYIQTRLCTLQLNARGEG*DPEWQG Trigger: CCCCTGCCACTCCGGATCCCAGCCCTCCCCTCGCGC...ATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR GCA 90 bp | CAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCACGAAGATCTGGTGGTaGGAGTATCGCAACAGCATG | + |
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Preference number: 4 (lower is better) Translates to: QTRLCTLQLNSVERVPRITKIWW*EYRNSM Trigger: CATGCTGTTGCGATACTCGCACCACCAGATCTTCGT...GATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | CAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCATGAAGACGAAGATCTaGTGGTGCGAGTATCGCAAC | + |
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Preference number: 4 (lower is better) Translates to: QTRLCTLQLNSVERVPRIMKTKI*WCEYRN Trigger: GTTGCGATACTCGCACCACCAGATCTTCGTCTTCAT...GATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR GCA 90 bp | GACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGGTCAGCAAGGGCGCTaGGGGGAAGGCGATGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: DSLFYIQTRLCTLQLNSVGQQGR*GEGDGH Trigger: ATGGCCATCGCCTTCCCCGCAGCGCCCTTGCTGACC...CACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR GCA 90 bp | GTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATCCCCCATCACAGAACTaGAGGATCACCGGTGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: VHDSLFYIQTRLCTLQLNPPSQN*RITGAR Trigger: CCGGGCACCGGTGATCCTGCAGTTCTGTGATGGGGG...ATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR TCA 90 bp | GTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATCCCAGCGGTGGCGTCTaGAGCAGCATCTCCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: VHDSLFYIQTRLCTLQLNPSGGV*SSISWI Trigger: AATCCAGGAGATGCTGCTTCAGACGCCACCGCTGGG...ATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CCA 90 bp | GACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGCCAGTGCCGCTTGCTaGTGTTGGTGTGGCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: DSLFYIQTRLCTLQLNSVASAAC*CWCGSR Trigger: TCTGCTGCCACACCAACACCAGCAAGCGGCACTGGC...CACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR GCA 90 bp | GACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGTCCTGGATTCGGATCTaGTGCAGGATGGCGGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: DSLFYIQTRLCTLQLNSVSWIRI*CRMAGN Trigger: GTTGCCCGCCATCCTGCAGCAGATCCGAATCCAGGA...CACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR TCA 90 bp | GACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGCATGCTCTAAGCAGTTaGTGGGGGACCGGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DSLFYIQTRLCTLQLNSVHALSS*WGTGRR Trigger: TCTTCTCCCGGTCCCCCATCAACTGCTTAGAGCATG...CACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR TCA 90 bp | GACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGCACCGCTCTGTGGCTTaGACACCTTGGGCTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: DSLFYIQTRLCTLQLNSVHRSVA*TPWAQC Trigger: ACATTGAGCCCAAGGTGTTCAAGCCACAGAGCGGTG...CACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR GCA 90 bp | GACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGCTGTGGCCACACTTTTaGTGGCGTCTCAGGAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: DSLFYIQTRLCTLQLNSVLWPHF*WRLRKR Trigger: CCTTTTCCTGAGACGCCAGCAAAAGTGTGGCCACAG...CACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CAA 90 bp | CCAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCAGAGGGTTGGGGTTGAGATaGGGGCCGCGAGGGCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: PGGRWPRAHRRPVPAASRGLGLR*GPRGPR Trigger: GCGCGGCCCTCGCGGCCCCAATCTCAACCCCAACCC...TCTGGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CAA 90 bp | CCAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCAGAAGCCGGTCGCGCACGTaGATGAGCGGGTTGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: PGGRWPRAHRRPVPAASRSRSRT*MSGLGL Trigger: CAACCCCAACCCGCTCATCAACGTGCGCGACCGGCT...TCTGGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS TCA 90 bp | TCGTCAGGCAGCGCCGTGGGGGTCCCGGGGCCCAGCGGTGGCGTCTaGAGCAGCATCTCCTGGATTCGGATCTGCTGCAGGATGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: SSGSAVGVPGPSGGV*SSISWIRICCRMAG Trigger: GCCCGCCATCCTGCAGCAGATCCGAATCCAGGAGATGCTGCTTCAGACGCCACCGCTGGGCCCCGGGACCCCCACGGCGCTGCCTGACGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS GCA 90 bp | CCCCCGGGTTCCAGCTCCAGGCCACCGAGGCCCCCATCACAGAACTaGAGGATCACCGGTGCCCGGCTCGAGTTGTGGCGCACCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: PPGSSSRPPRPPSQN*RITGARLELWRTST Trigger: GGTGGAGGTGCGCCACAACTCGAGCCGGGCACCGGTGATCCTGCAGTTCTGTGATGGGGGCCTCGGTGGCCTGGAGCTGGAACCCGGGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS GCA 90 bp | CTCCAGGCCACCGAGGCCCCCATCACAGAACTGCAGGATCACCGGTaGCCGGCTCGAGTTGTGGCGCACCTCCACCCGCAGGACACCCTC | + |
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Preference number: 5 (lower is better) Translates to: LQATEAPITELQDHR*PARVVAHLHPQDTL Trigger: GAGGGTGTCCTGCGGGTGGAGGTGCGCCACAACTCGAGCCGGGCACCGGTGATCCTGCAGTTCTGTGATGGGGGCCTCGGTGGCCTGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS GCA 90 bp | AAGGGCGCTGCGGGGAAGGCGATGGCCATGTTCATCTCCAGCATCTaGAGCAGGTCCACTGCGGGCACAGGGCGGCCGCCCATGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: KGAAGKAMAMFISSI*SRSTAGTGRPPMRA Trigger: GGCCCTCATGGGCGGCCGCCCTGTGCCCGCAGTGGACCTGCTGCAGATGCTGGAGATGAACATGGCCATCGCCTTCCCCGCAGCGCCCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124536.2 |
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| CDS-3UTR CAA 90 bp | GCACCAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCCCTGTGGCCACACTTTaGCTGGCGTCTCAGGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: APGGRWPRAHRRPVPAASPVATL*LASQEK Trigger: CTTTTCCTGAGACGCCAGCAAAAGTGTGGCCACAGG...GGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTGGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS-3UTR CAA 90 bp | CAGGCGGCCGATGGCCTCGTGCCCATCGCCGCCCTGTCCCGGCCGCTTCCAGAAGCAGGGGAGCCAGAGTaGTTGTTGAGGTCGTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: QAADGLVPIAALSRPLPEAGEPE*LLRSSG Trigger: GCCTGACGACCTCAACAACAACTCTGGCTCCCCTGC...TTCTGGAAGCGGCCGGGACAGGGCGGCGATGGGCACGAGGCCATCGGCCGCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS CCA 90 bp | GTTGAGGTCGTCAGGCAGCGCCGTGGGGGTCCCGGGGCCCAGCGGTaGCGTCTGAAGCAGCATCTCCTGGATTCGGATCTGCTGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VEVVRQRRGGPGAQR*RLKQHLLDSDLLQD Trigger: ATCCTGCAGCAGATCCGAATCCAGGAGATGCTGCTTCAGACGCCACCGCTGGGCCCCGGGACCCCCACGGCGCTGCCTGACGACCTCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS-3UTR CAA 90 bp | CGCCCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTGCAGAACGTTGATGAGCGGGTaGGGGTTGAGATTGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPVPAASRTFATSPSPCRTLMSG*GLRLGP Trigger: CGGCCCCAATCTCAACCCCAACCCGCTCATCAACGT...TCTGCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS-3UTR CAA 90 bp | CGCCCTGTCCCGGCCGCTTCCAGAACCTTCGCCACCAGCCCCTCTCCCTGCAGAGCACCGCTCTGTGGCTaGAACACCTTGGGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: RPVPAASRTFATSPSPCRAPLCG*NTLGSM Trigger: CATTGAGCCCAAGGTGTTCAAGCCACAGAGCGGTGC...TCTGCAGGGAGAGGGGCTGGTGGCGAAGGTTCTGGAAGCGGCCGGGACAGGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS TCA 90 bp | CCAGGAGAGAGGCGCTCAGCCCCGACAGGAAGGATGCGTCAGAGATaGTGGCGGCGGTCTCGGCCACCCAACCTAGGTCACTGCCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: PGERRSAPTGRMRQR*WRRSRPPNLGHCRI Trigger: TATCCGGCAGTGACCTAGGTTGGGTGGCCGAGACCGCCGCCATCATCTCTGACGCATCCTTCCTGTCGGGGCTGAGCGCCTCTCTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS GCA 90 bp | GGCTTCCATCCCGACGAGAGCCAGGATGACGGTCAGCAAGGGCGCTaGGGGGAAGGCGATGGCCATGTTCATCTCCAGCATCTGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFHPDESQDDGQQGR*GEGDGHVHLQHLQQ Trigger: CTGCTGCAGATGCTGGAGATGAACATGGCCATCGCCTTCCCCGCAGCGCCCTTGCTGACCGTCATCCTGGCTCTCGTCGGGATGGAAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CCA 90 bp | ACCCCACCCCCGGCCGGCTGGGACTCACCGATGAAGACGAAGATCTaGTGGTGCGAGTATCGCAACAGCATGGACACGCTGAGGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPPPAGWDSPMKTKI*WCEYRNSMDTLRVK Trigger: CTTTACCCTCAGCGTGTCCATGCTGTTGCGATACTCGCACCACCAGATCTTCGTCTTCATCGGTGAGTCCCAGCCGGCCGGGGGTGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124536.2 |
||
| CDS GCA 90 bp | ACCTCCACCCGCAGGACACCCTCCCGCGGCCATCGATCTCGAACATaGTCTAAGCAGTTGATGGGGGACCGGGAGAAGACGATGTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: TSTRRTPSRGHRSRT*SKQLMGDREKTMCM Trigger: CATACACATCGTCTTCTCCCGGTCCCCCATCAACTGCTTAGAGCATGTTCGAGATCGATGGCCGCGGGAGGGTGTCCTGCGGGTGGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS GCA 90 bp | CCCCCGGCCGGCTGGGACTCACCGATGAAGACGAAGATCTGGTGGTaGGAGTATCGCAACAGCATGGACACGCTGAGGGTAAAGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: PPAGWDSPMKTKIWW*EYRNSMDTLRVKMT Trigger: GGTCATCTTTACCCTCAGCGTGTCCATGCTGTTGCGATACTCGCACCACCAGATCTTCGTCTTCATCGGTGAGTCCCAGCCGGCCGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124536.2 |
||
| CDS CCA 90 bp | CGCGTGGGGTCTAGGGTGACCACCATGACAGGAATGCTCAGACGCTaGCGTGTGGCTTGGGATAGCCGCAGGAAGCCATATTCCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVGSRVTTMTGMLRR*RVAWDSRRKPYSSE Trigger: CTCACTGGAATATGGCTTCCTGCGGCTATCCCAAGCCACACGCCAGCGTCTGAGCATTCCTGTCATGGTGGTCACCCTAGACCCCACGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CCA 90 bp | CCACCCCCGGCCGGCTGGGACTCACCGATGAAGACGAAGATCTGGTaGTGCGAGTATCGCAACAGCATGGACACGCTGAGGGTAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PPPAGWDSPMKTKIW*CEYRNSMDTLRVKM Trigger: CATCTTTACCCTCAGCGTGTCCATGCTGTTGCGATACTCGCACCACCAGATCTTCGTCTTCATCGGTGAGTCCCAGCCGGCCGGGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124536.2 |
||
| CDS TCA 90 bp | GGACACCCTCCCGCGGCCATCGATCTCGAACATGCTCTAAGCAGTTaGTGGGGGACCGGGAGAAGACGATGTGTATGTAGGCGAGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: GHPPAAIDLEHALSS*WGTGRRRCVCRRGR Trigger: TCGTCCTCGCCTACATACACATCGTCTTCTCCCGGTCCCCCATCAACTGCTTAGAGCATGTTCGAGATCGATGGCCGCGGGAGGGTGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS GCA 90 bp | TGGCGTCTCAGGAAAAGGGAAGTCCTGGCTGTCGTTCAGGGCATCTaGACCGCTCTGTGGCTTGAACACCTTGGGCTCAATGTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WRLRKREVLAVVQGI*TALWLEHLGLNVQL Trigger: GAGCTGGACATTGAGCCCAAGGTGTTCAAGCCACAGAGCGGTGCAGATGCCCTGAACGACAGCCAGGACTTCCCTTTTCCTGAGACGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CCA 90 bp | TCCTGTGGCCACACTTTTGCTGGCGTCTCAGGAAAAGGGAAGTCCTaGCTGTCGTTCAGGGCATCTGCACCGCTCTGTGGCTTGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: SCGHTFAGVSGKGKS*LSFRASAPLCGLNT Trigger: GGTGTTCAAGCCACAGAGCGGTGCAGATGCCCTGAACGACAGCCAGGACTTCCCTTTTCCTGAGACGCCAGCAAAAGTGTGGCCACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS TCA 90 bp | AACGAAGAATTCAAAGAGGCGGCGGAAAGCAGGTGGGAAGAGGCGTaGGTAGGTGACGGCCATCTTGAAGAAGAGAGCGTGGAAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NEEFKEAAESRWEEA*VGDGHLEEESVEEP Trigger: CGGCTCTTCCACGCTCTCTTCTTCAAGATGGCCGTCACCTACTCACGCCTCTTCCCACCTGCTTTCCGCCGCCTCTTTGAATTCTTCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CCA 90 bp | AGGGTGACCACCATGACAGGAATGCTCAGACGCTGGCGTGTGGCTTaGGATAGCCGCAGGAAGCCATATTCCAGTGAGTACTCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: RVTTMTGMLRRWRVA*DSRRKPYSSEYSTM Trigger: CATTGTGGAGTACTCACTGGAATATGGCTTCCTGCGGCTATCCCAAGCCACACGCCAGCGTCTGAGCATTCCTGTCATGGTGGTCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS GCA 90 bp | TCCAGCATCTGCAGCAGGTCCACGATGAAGACGAAGATCTGGTGGTaGGAGTATCGCAACAGCATGGACACGCTGAGGGTAAAGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSICSRSTMKTKIWW*EYRNSMDTLRVKMT Trigger: GGTCATCTTTACCCTCAGCGTGTCCATGCTGTTGCGATACTCGCACCACCAGATCTTCGTCTTCATCGTGGACCTGCTGCAGATGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS-3UTR CAA 90 bp | CAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTGTGCCCCGCATCTGCCGCTTGCTGGTGTaGGTGTGGCAGCAGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTRLCTLQLNSVERVPRICRLLV*VWQQMA Trigger: TGCCATCTGCTGCCACACCAACACCAGCAAGCGGCA...GATGCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS CCA 90 bp | AAAAGGGAAGTCCTGGCTGTCGTTCAGGGCATCTGCACCGCTCTGTaGCTTGAACACCTTGGGCTCAATGTCCAGCTCAAACTTGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: KREVLAVVQGICTAL*LEHLGLNVQLKLDG Trigger: TCCATCAAGTTTGAGCTGGACATTGAGCCCAAGGTGTTCAAGCCACAGAGCGGTGCAGATGCCCTGAACGACAGCCAGGACTTCCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CCA 90 bp | GTGGCGTCTGAAGCAGCATCTCCTGGATTCGGATCTGCTGCAGGATaGCGGGCAACTCATAGTGGTGGAAGAAGTAGATCATGGAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VASEAASPGFGSAAG*RATHSGGRSRSWNA Trigger: AGCATTCCATGATCTACTTCTTCCACCACTATGAGTTGCCCGCCATCCTGCAGCAGATCCGAATCCAGGAGATGCTGCTTCAGACGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS TCA 90 bp | AGACGATGTGTATGTAGGCGAGGACGAAAAGCACAAACAGGGCCTTaGGCAGAACGAAGAATTCAAAGAGGCGGCGGAAAGCAGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRCVCRRGRKAQTGP*AERRIQRGGGKQVG Trigger: TCCCACCTGCTTTCCGCCGCCTCTTTGAATTCTTCGTTCTGCTCAAGGCCCTGTTTGTGCTTTTCGTCCTCGCCTACATACACATCGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS-3UTR CAA 90 bp | GTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATTGTGGCTTGAACACCTaGGGCTCAATGTCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VHDSLFYIQTRLCTLQLNCGLNT*GSMSSS Trigger: TGAGCTGGACATTGAGCCCAAGGTGTTCAAGCCACA...ATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS-3UTR CAA 90 bp | GTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCACAAACAGGGCCTaGAGCAGAACGAAGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: VHDSLFYIQTRLCTLQLNSTNRA*SRTKNS Trigger: TGAATTCTTCGTTCTGCTCAAGGCCCTGTTTGTGCT...ATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS-3UTR CAA 90 bp | GTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATATGTCCAGCTCAAACTaGATGGAGCTGTTGGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VHDSLFYIQTRLCTLQLNMSSSN*MELLVN Trigger: GTTCACCAACAGCTCCATCAAGTTTGAGCTGGACAT...ATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS-3UTR CAA 90 bp | GTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATGCCGTGGTGGTATCATaGAAGAACTCAGACATGATG | + |
|
Preference number: 5 (lower is better) Translates to: VHDSLFYIQTRLCTLQLNAVVVS*KNSDMM Trigger: CATCATGTCTGAGTTCTTCAATGATACCACCACGGC...ATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS CAA 72 bp | AAGAGCCGGTCGCGCACGTTGATGAGCGGGTTGGGGTaGAGATTGGGGCCGCGAGGGCCGCGCACGGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: KSRSRTLMSGLG*RLGPRGPRTGA Trigger: GGCGCCCGTGCGCGGCCCTCGCGGCCCCAATCTCAACCCCAACCCGCTCATCAACGTGCGCGACCGGCTCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS CAA 72 bp | GCGTGGAAGAGCCGGTCGCGCACGTTGATGAGCGGGTaGGGGTTGAGATTGGGGCCGCGAGGGCCGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: AWKSRSRTLMSG*GLRLGPRGPRT Trigger: CGTGCGCGGCCCTCGCGGCCCCAATCTCAACCCCAACCCGCTCATCAACGTGCGCGACCGGCTCTTCCACGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS TCA 72 bp | AGCGCCGTGGGGGTCCCGGGGCCCAGCGGTGGCGTCTaGAGCAGCATCTCCTGGATTCGGATCTGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAVGVPGPSGGV*SSISWIRICCR Trigger: CCTGCAGCAGATCCGAATCCAGGAGATGCTGCTTCAGACGCCACCGCTGGGCCCCGGGACCCCCACGGCGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS GCA 72 bp | GGCCATGTTCATCTCCAGCATCTGCAGCAGGTCCACTaGGGGCACAGGGCGGCCGCCCATGAGGGCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GHVHLQHLQQVH*GHRAAAHEGLG Trigger: CCCCAGGCCCTCATGGGCGGCCGCCCTGTGCCCGCAGTGGACCTGCTGCAGATGCTGGAGATGAACATGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124536.2 |
||
| CDS GCA 72 bp | GCGGGGAAGGCGATGGCCATGTTCATCTCCAGCATCTaGAGCAGGTCCACTGCGGGCACAGGGCGGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGKAMAMFISSI*SRSTAGTGRPP Trigger: GGGCGGCCGCCCTGTGCCCGCAGTGGACCTGCTGCAGATGCTGGAGATGAACATGGCCATCGCCTTCCCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124536.2 |
||
| CDS CCA 72 bp | GTCAGGCAGCGCCGTGGGGGTCCCGGGGCCCAGCGGTaGCGTCTGAAGCAGCATCTCCTGGATTCGGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRQRRGGPGAQR*RLKQHLLDSDL Trigger: CAGATCCGAATCCAGGAGATGCTGCTTCAGACGCCACCGCTGGGCCCCGGGACCCCCACGGCGCTGCCTGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CAA 72 bp | CTGGGATCCGGAGTGGCAGGGGAGCCAGAGTTGTTGTaGAGGTCGTCAGGCAGCGCCGTGGGGGTCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGSGVAGEPELL*RSSGSAVGVPG Trigger: CCCCGGGACCCCCACGGCGCTGCCTGACGACCTCAACAACAACTCTGGCTCCCCTGCCACTCCGGATCCCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CAA 72 bp | GGGCTGGGATCCGGAGTGGCAGGGGAGCCAGAGTTGTaGTTGAGGTCGTCAGGCAGCGCCGTGGGGGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GLGSGVAGEPEL*LRSSGSAVGVP Trigger: CGGGACCCCCACGGCGCTGCCTGACGACCTCAACAACAACTCTGGCTCCCCTGCCACTCCGGATCCCAGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS GCA 72 bp | ACCGAGGCCCCCATCACAGAACTGCAGGATCACCGGTaGCCGGCTCGAGTTGTGGCGCACCTCCACCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TEAPITELQDHR*PARVVAHLHPQ Trigger: CTGCGGGTGGAGGTGCGCCACAACTCGAGCCGGGCACCGGTGATCCTGCAGTTCTGTGATGGGGGCCTCGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS GCA 72 bp | TCCAGCTCCAGGCCACCGAGGCCCCCATCACAGAACTaGAGGATCACCGGTGCCCGGCTCGAGTTGTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRPPRPPSQN*RITGARLELWR Trigger: GCGCCACAACTCGAGCCGGGCACCGGTGATCCTGCAGTTCTGTGATGGGGGCCTCGGTGGCCTGGAGCTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CAA 90 bp | ACGGCCATCTTGAAGAAGAGAGCGTGGAAGAGCCGGTCGCGCACGTaGATGAGCGGGTTGGGGTTGAGATTGGGGCCGCGAGGGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TAILKKRAWKSRSRT*MSGLGLRLGPRGPR Trigger: GCGCGGCCCTCGCGGCCCCAATCTCAACCCCAACCCGCTCATCAACGTGCGCGACCGGCTCTTCCACGCTCTCTTCTTCAAGATGGCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS GCA 72 bp | CGCAGGACACCCTCCCGCGGCCATCGATCTCGAACATaGTCTAAGCAGTTGATGGGGGACCGGGAGAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: RRTPSRGHRSRT*SKQLMGDREKT Trigger: CGTCTTCTCCCGGTCCCCCATCAACTGCTTAGAGCATGTTCGAGATCGATGGCCGCGGGAGGGTGTCCTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CCA 72 bp | TCCAGCAATAGGCGGCTGAAGCGGTCCCCAAAGCACTaGTCCCGCGTGGGGTCTAGGGTGACCACCATGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSNRRLKRSPKH*SRVGSRVTTMT Trigger: TGTCATGGTGGTCACCCTAGACCCCACGCGGGACCAGTGCTTTGGGGACCGCTTCAGCCGCCTATTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS TCA 72 bp | CATCATAGCCCAGGAACTCATCCAGCAATAGGCGGCTaGAGCGGTCCCCAAAGCACTGGTCCCGCGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: HHSPGTHPAIGG*SGPQSTGPAWG Trigger: ACCCCACGCGGGACCAGTGCTTTGGGGACCGCTTCAGCCGCCTATTGCTGGATGAGTTCCTGGGCTATGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS TCA 72 bp | AGGCCGCCAGGTAGGATGTGCGCGCCATCCACATGCTaGCAAAGCGGTAGTGCTCCCCAGAGACCACATTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPPGRMCAPSTC*QSGSAPQRPHS Trigger: GGAATGTGGTCTCTGGGGAGCACTACCGCTTTGTCAGCATGTGGATGGCGCGCACATCCTACCTGGCGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CCA 72 bp | CCGGCCGGCTGGGACTCACCGATGAAGACGAAGATCTaGTGGTGCGAGTATCGCAACAGCATGGACACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAGWDSPMKTKI*WCEYRNSMDTL Trigger: CAGCGTGTCCATGCTGTTGCGATACTCGCACCACCAGATCTTCGTCTTCATCGGTGAGTCCCAGCCGGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124536.2 |
||
| CDS CAA 72 bp | TTGAAGAAGAGAGCGTGGAAGAGCCGGTCGCGCACGTaGATGAGCGGGTTGGGGTTGAGATTGGGGCCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LKKRAWKSRSRT*MSGLGLRLGPR Trigger: TCGCGGCCCCAATCTCAACCCCAACCCGCTCATCAACGTGCGCGACCGGCTCTTCCACGCTCTCTTCTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS CCA 72 bp | GCCGGCTGGGACTCACCGATGAAGACGAAGATCTGGTaGTGCGAGTATCGCAACAGCATGGACACGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGWDSPMKTKIW*CEYRNSMDTLR Trigger: CCTCAGCGTGTCCATGCTGTTGCGATACTCGCACCACCAGATCTTCGTCTTCATCGGTGAGTCCCAGCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124536.2 |
||
| CDS GCA 72 bp | GCGGGGAAGGCGATGGCCATGTTCATCTCCAGCATCTaGAGCAGGTCCACGATGAAGACGAAGATCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGKAMAMFISSI*SRSTMKTKIWW Trigger: CCACCAGATCTTCGTCTTCATCGTGGACCTGCTGCAGATGCTGGAGATGAACATGGCCATCGCCTTCCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
||
| CDS CCA 72 bp | CACACTTTTGCTGGCGTCTCAGGAAAAGGGAAGTCCTaGCTGTCGTTCAGGGCATCTGCACCGCTCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HTFAGVSGKGKS*LSFRASAPLCG Trigger: GCCACAGAGCGGTGCAGATGCCCTGAACGACAGCCAGGACTTCCCTTTTCCTGAGACGCCAGCAAAAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS CAA 90 bp | GGGAAGTCCTGGCTGTCGTTCAGGGCATCTGCACCGCTCTGTGGCTaGAACACCTTGGGCTCAATGTCCAGCTCAAACTTGATGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GKSWLSFRASAPLCG*NTLGSMSSSNLMEL Trigger: CAGCTCCATCAAGTTTGAGCTGGACATTGAGCCCAAGGTGTTCAAGCCACAGAGCGGTGCAGATGCCCTGAACGACAGCCAGGACTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS TCA 72 bp | CCCGCGGCCATCGATCTCGAACATGCTCTAAGCAGTTaGTGGGGGACCGGGAGAAGACGATGTGTATGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PAAIDLEHALSS*WGTGRRRCVCR Trigger: CCTACATACACATCGTCTTCTCCCGGTCCCCCATCAACTGCTTAGAGCATGTTCGAGATCGATGGCCGCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
||
| CDS GCA 72 bp | GGCTGGGACTCACCGATGAAGACGAAGATCTGGTGGTaGGAGTATCGCAACAGCATGGACACGCTGAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GWDSPMKTKIWW*EYRNSMDTLRV Trigger: TACCCTCAGCGTGTCCATGCTGTTGCGATACTCGCACCACCAGATCTTCGTCTTCATCGGTGAGTCCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124536.2 |
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| CDS CCA 72 bp | GTCCTGGCTGTCGTTCAGGGCATCTGCACCGCTCTGTaGCTTGAACACCTTGGGCTCAATGTCCAGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VLAVVQGICTAL*LEHLGLNVQLK Trigger: TTTGAGCTGGACATTGAGCCCAAGGTGTTCAAGCCACAGAGCGGTGCAGATGCCCTGAACGACAGCCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS CCA 72 bp | TCTAGGGTGACCACCATGACAGGAATGCTCAGACGCTaGCGTGTGGCTTGGGATAGCCGCAGGAAGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: SRVTTMTGMLRR*RVAWDSRRKPY Trigger: ATATGGCTTCCTGCGGCTATCCCAAGCCACACGCCAGCGTCTGAGCATTCCTGTCATGGTGGTCACCCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS GCA 72 bp | TGCAGCAGGTCCACGATGAAGACGAAGATCTGGTGGTaGGAGTATCGCAACAGCATGGACACGCTGAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: CSRSTMKTKIWW*EYRNSMDTLRV Trigger: TACCCTCAGCGTGTCCATGCTGTTGCGATACTCGCACCACCAGATCTTCGTCTTCATCGTGGACCTGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS CCA 72 bp | ACCATGACAGGAATGCTCAGACGCTGGCGTGTGGCTTaGGATAGCCGCAGGAAGCCATATTCCAGTGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: TMTGMLRRWRVA*DSRRKPYSSEY Trigger: GTACTCACTGGAATATGGCTTCCTGCGGCTATCCCAAGCCACACGCCAGCGTCTGAGCATTCCTGTCATGGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS CCA 72 bp | ATCTGCAGCAGGTCCACGATGAAGACGAAGATCTGGTaGTGCGAGTATCGCAACAGCATGGACACGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ICSRSTMKTKIW*CEYRNSMDTLR Trigger: CCTCAGCGTGTCCATGCTGTTGCGATACTCGCACCACCAGATCTTCGTCTTCATCGTGGACCTGCTGCAGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052885.14 |
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| CDS CCA 72 bp | GGTAGAGGTAGAAGAACCTCAGCCAGTGCCGCTTGCTaGTGTTGGTGTGGCAGCAGATGGCATCATACTGGT | + |
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Preference number: 6 (lower is better) Translates to: GRGRRTSASAAC*CWCGSRWHHTG Trigger: ACCAGTATGATGCCATCTGCTGCCACACCAACACCAGCAAGCGGCACTGGCTGAGGTTCTTCTACCTCTACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS CAA 72 bp | TGGCTGTCGTTCAGGGCATCTGCACCGCTCTGTGGCTaGAACACCTTGGGCTCAATGTCCAGCTCAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: WLSFRASAPLCG*NTLGSMSSSNL Trigger: CAAGTTTGAGCTGGACATTGAGCCCAAGGTGTTCAAGCCACAGAGCGGTGCAGATGCCCTGAACGACAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS GCA 72 bp | GTACTCCACAATGTACTCATCCTGTGGCCACACTTTTaGTGGCGTCTCAGGAAAAGGGAAGTCCTGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VLHNVLILWPHF*WRLRKREVLAV Trigger: GACAGCCAGGACTTCCCTTTTCCTGAGACGCCAGCAAAAGTGTGGCCACAGGATGAGTACATTGTGGAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS CCA 72 bp | CTCCACAATGTACTCATCCTGTGGCCACACTTTTGCTaGCGTCTCAGGAAAAGGGAAGTCCTGGCTGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: LHNVLILWPHFC*RLRKREVLAVV Trigger: AACGACAGCCAGGACTTCCCTTTTCCTGAGACGCCAGCAAAAGTGTGGCCACAGGATGAGTACATTGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS CCA 72 bp | GAAGCAGCATCTCCTGGATTCGGATCTGCTGCAGGATaGCGGGCAACTCATAGTGGTGGAAGAAGTAGATCA | + |
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Preference number: 6 (lower is better) Translates to: EAASPGFGSAAG*RATHSGGRSRS Trigger: TGATCTACTTCTTCCACCACTATGAGTTGCCCGCCATCCTGCAGCAGATCCGAATCCAGGAGATGCTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS TCA 72 bp | GTATGTAGGCGAGGACGAAAAGCACAAACAGGGCCTTaGGCAGAACGAAGAATTCAAAGAGGCGGCGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: VCRRGRKAQTGP*AERRIQRGGGK Trigger: CTTTCCGCCGCCTCTTTGAATTCTTCGTTCTGCTCAAGGCCCTGTTTGTGCTTTTCGTCCTCGCCTACATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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| CDS CAA 72 bp | GGCTTGAACACCTTGGGCTCAATGTCCAGCTCAAACTaGATGGAGCTGTTGGTGAACATCTCCACTGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: GLNTLGSMSSSN*MELLVNISTVS Trigger: GCTCACAGTGGAGATGTTCACCAACAGCTCCATCAAGTTTGAGCTGGACATTGAGCCCAAGGTGTTCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052885.14 ENSMUST00000124536.2 |
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