Pregenerated sensors for TMEM255B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038457Ensembl transcript IDs: ENSMUST00000167071.9, ENSMUST00000167505.3, ENSMUST00000210804.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCAGGGTGAAGGAGCATGGGAACACCCACGGCTGGGCTGGCACTaGGAGGGAGACTCTGTGTCCTCAGGCAGAGAGAGGTCAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: VQGEGAWEHPRLGWH*EGDSVSSGRERSAE Trigger: CTCTGCTGACCTCTCTCTGCCTGAGGACACAGAGTCTCCCTCCCAGTGCCAGCCCAGCCGTGGGTGTTCCCATGCTCCTTCACCCTGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR CCA 90 bp | AGTAGGCTGGTGTGCAGGGTGAAGGAGCATGGGAACACCCACGGCTaGGCTGGCACTGGGAGGGAGACTCTGTGTCCTCAGGCAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: SRLVCRVKEHGNTHG*AGTGRETLCPQAER Trigger: TCTCTCTGCCTGAGGACACAGAGTCTCCCTCCCAGTGCCAGCCCAGCCGTGGGTGTTCCCATGCTCCTTCACCCTGCACACCAGCCTACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR GCA 90 bp | AGCTACGCACGCCCACAAACTCATAGTAGGCAGGCGAGGGCTCAGTaGTCCCACAGGCGTAGAGGTCGCAGCAGTAGCACGTGTTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: SYARPQTHSRQARAQ*SHRRRGRSSSTCCS Trigger: GGAGCAACACGTGCTACTGCTGCGACCTCTACGCCTGTGGGAGCACTGAGCCCTCGCCTGCCTACTATGAGTTTGTGGGCGTGCGTAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR TCA 90 bp | GGCGAGAATCTGCTGTGCAGGGTTATAGAGAATCTGAGGTGGCGGTaGCGGGCCATAGGCCAGCTGAGACAGAGGGACCATGTCCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: GENLLCRVIENLRWR*RAIGQLRQRDHVLE Trigger: TTCAAGGACATGGTCCCTCTGTCTCAGCTGGCCTATGGCCCGTCACCGCCACCTCAGATTCTCTATAACCCTGCACAGCAGATTCTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR TCA 90 bp | TGCTCCTCACCTTCAACTGGCATCGACCATTCAAAGAGTAGCAGGTaGCCTCTGTCTGATAGACGTCATACAAGTACCCAGCCCCACTGG | + |
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Preference number: 1 (lower is better) Translates to: CSSPSTGIDHSKSSR*PLSDRRHTSTQPHW Trigger: CCAGTGGGGCTGGGTACTTGTATGACGTCTATCAGACAGAGGTCACCTGCTACTCTTTGAATGGTCGATGCCAGTTGAAGGTGAGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACTGGGAGGGAGACTCTGTGTCCTCAGGCAGAGAGAGGTCAGCAGAGGCCGGAGGGACCATGTCCTTaGAGGCCCCTAGGACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GTGRETLCPQAERGQQRPEGPCP*RPLGLQ Trigger: CTGCAGTCCTAGGGGCCTTCAAGGACATGGTCCCTC...CGGCCTCTGCTGACCTCTCTCTGCCTGAGGACACAGAGTCTCCCTCCCAGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR GCA 72 bp | GGGGTGGCTTCTCCCCTGGGAGGAAGTAGGCTGGTGTaGAGGGTGAAGGAGCATGGGAACACCCACGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GVASPLGGSRLV*RVKEHGNTHGW Trigger: CCAGCCGTGGGTGTTCCCATGCTCCTTCACCCTGCACACCAGCCTACTTCCTCCCAGGGGAGAAGCCACCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR CCA 72 bp | GAAGGAGCATGGGAACACCCACGGCTGGGCTGGCACTaGGAGGGAGACTCTGTGTCCTCAGGCAGAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: EGAWEHPRLGWH*EGDSVSSGRER Trigger: CCTCTCTCTGCCTGAGGACACAGAGTCTCCCTCCCAGTGCCAGCCCAGCCGTGGGTGTTCCCATGCTCCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR CCA 72 bp | CAGGGTGAAGGAGCATGGGAACACCCACGGCTGGGCTaGCACTGGGAGGGAGACTCTGTGTCCTCAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: QGEGAWEHPRLG*HWEGDSVSSGR Trigger: TCTGCCTGAGGACACAGAGTCTCCCTCCCAGTGCCAGCCCAGCCGTGGGTGTTCCCATGCTCCTTCACCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR CCA 72 bp | GTGTGCAGGGTGAAGGAGCATGGGAACACCCACGGCTaGGCTGGCACTGGGAGGGAGACTCTGTGTCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: VCRVKEHGNTHG*AGTGRETLCPQ Trigger: CTGAGGACACAGAGTCTCCCTCCCAGTGCCAGCCCAGCCGTGGGTGTTCCCATGCTCCTTCACCCTGCACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR GCA 72 bp | CGCCCACAAACTCATAGTAGGCAGGCGAGGGCTCAGTaGTCCCACAGGCGTAGAGGTCGCAGCAGTAGCACG | + |
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Preference number: 3 (lower is better) Translates to: RPQTHSRQARAQ*SHRRRGRSSST Trigger: CGTGCTACTGCTGCGACCTCTACGCCTGTGGGAGCACTGAGCCCTCGCCTGCCTACTATGAGTTTGTGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR CCA 72 bp | TTCAGCACTGTGGATACCCAGAGCAGCCGGTACAGGTaGACCACGTCCTGGCAGCTACGCACGCCCACAAAC | + |
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Preference number: 3 (lower is better) Translates to: FSTVDTQSSRYR*TTSWQLRTPTN Trigger: GTTTGTGGGCGTGCGTAGCTGCCAGGACGTGGTCCACCTGTACCGGCTGCTCTGGGTATCCACAGTGCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR CCA 72 bp | CAATGCCCAGGCACAGGCCCAATACGTTCAGCACTGTaGATACCCAGAGCAGCCGGTACAGGTGGACCACGT | + |
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Preference number: 3 (lower is better) Translates to: QCPGTGPIRSAL*IPRAAGTGGPR Trigger: ACGTGGTCCACCTGTACCGGCTGCTCTGGGTATCCACAGTGCTGAACGTATTGGGCCTGTGCCTGGGCATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR TCA 72 bp | CTGCTGTGCAGGGTTATAGAGAATCTGAGGTGGCGGTaGCGGGCCATAGGCCAGCTGAGACAGAGGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: LLCRVIENLRWR*RAIGQLRQRDH Trigger: ATGGTCCCTCTGTCTCAGCTGGCCTATGGCCCGTCACCGCCACCTCAGATTCTCTATAACCCTGCACAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR GCA 72 bp | TCCCACAGGCGTAGAGGTCGCAGCAGTAGCACGTGTTaGTCCTCACCTTCAACTGGCATCGACCATTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SHRRRGRSSSTC*SSPSTGIDHSK Trigger: CTTTGAATGGTCGATGCCAGTTGAAGGTGAGGAGCAACACGTGCTACTGCTGCGACCTCTACGCCTGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| 3UTR TCA 72 bp | CCTTCAACTGGCATCGACCATTCAAAGAGTAGCAGGTaGCCTCTGTCTGATAGACGTCATACAAGTACCCAG | + |
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Preference number: 3 (lower is better) Translates to: PSTGIDHSKSSR*PLSDRRHTSTQ Trigger: CTGGGTACTTGTATGACGTCTATCAGACAGAGGTCACCTGCTACTCTTTGAATGGTCGATGCCAGTTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| CDS-3UTR CCA 90 bp | GACGTCATACAAGTACCCAGCCCCACTGGAGTAAAACTGGCATCTTCCCGCACTGGCTGCCACCAACTGTaGTGTCCAGCAGAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: DVIQVPSPTGVKLASSRTGCHQL*CPAEPE Trigger: CTCTGGCTCTGCTGGACACCACAGTTGGTGGCAGCC...AGTGCGGGAAGATGCCAGTTTTACTCCAGTGGGGCTGGGTACTTGTATGACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| CDS CCA 90 bp | CGCCACCACCCCAAAGCTGAGGAACACGATGGCTGCCACCAACTGTaGTGTCCAGCAGAGCCAGAGGGCCTGGCACGGGCGGTGGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: RHHPKAEEHDGCHQL*CPAEPEGLARAVGA Trigger: CGCTCCCACCGCCCGTGCCAGGCCCTCTGGCTCTGCTGGACACCACAGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| CDS CCA 90 bp | CCACAAACCACAGAGAGATCTTCTTCCTCCTGGCAAAGCCCTCTGTaGTGTCCAGCAGAGCCAGAGGGCCTGGCACGGGCGGTGGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: PQTTERSSSSWQSPL*CPAEPEGLARAVGA Trigger: CGCTCCCACCGCCCGTGCCAGGCCCTCTGGCTCTGCTGGACACCACAGAGGGCTTTGCCAGGAGGAAGAAGATCTCTCTGTGGTTTGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167071.9 ENSMUST00000167505.3 |
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| CDS TCA 90 bp | CGCTGTCGACTATGGCACAGCAGAACGCCGCCACCACCCCAAAGCTaGGGAACACGATGGCTGCCACCAACTGTGGTGTCCAGCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: RCRLWHSRTPPPPQS*GTRWLPPTVVSSRA Trigger: GGCTCTGCTGGACACCACAGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCGGCGTTCTGCTGTGCCATAGTCGACAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| CDS TCA 90 bp | ACAAGTACCCAGCCCCACTGGAGTAAAACTGGCATCTTCCCGCACTaGGAGGCCTTGGCTCAATGTGCCGCGCTGCGAACACGCTGTCGA | + |
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Preference number: 5 (lower is better) Translates to: TSTQPHWSKTGIFPH*EALAQCAALRTRCR Trigger: TCGACAGCGTGTTCGCAGCGCGGCACATTGAGCCAAGGCCTCTCAGTGCGGGAAGATGCCAGTTTTACTCCAGTGGGGCTGGGTACTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167071.9 ENSMUST00000167505.3 |
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| CDS CCA 90 bp | AGCCCCACTGGAGTAAAACTGGCATCTTCCCGCACTGAGAGGCCTTaGCTCAATGTGCCGCGCTGCGAACACGCTGTCGACTATGGCACA | + |
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Preference number: 5 (lower is better) Translates to: SPTGVKLASSRTERP*LNVPRCEHAVDYGT Trigger: TGTGCCATAGTCGACAGCGTGTTCGCAGCGCGGCACATTGAGCCAAGGCCTCTCAGTGCGGGAAGATGCCAGTTTTACTCCAGTGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167071.9 ENSMUST00000167505.3 |
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| CDS GCA 90 bp | ACAGCAGAACGCCGCCACCACCCCAAAGCTGAGGAACACGATGGCTaGCACCAAAATAATCCCTGGGTAGTAGCCGCCCACAGTCACATT | + |
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Preference number: 5 (lower is better) Translates to: TAERRHHPKAEEHDG*HQNNPWVVAAHSHI Trigger: AATGTGACTGTGGGCGGCTACTACCCAGGGATTATTTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCGGCGTTCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167071.9 |
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| CDS TCA 90 bp | CGCTGTCGACTATGGCACAGCAGAACGCCGCCACCACCCCAAAGCTaGGGAACACGATGGCTGCCACCAACATTTGTCTTCTATTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RCRLWHSRTPPPPQS*GTRWLPPTFVFYSP Trigger: TGGAGAATAGAAGACAAATGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCGGCGTTCTGCTGTGCCATAGTCGACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167505.3 |
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| CDS GCA 90 bp | ACAGCAGAACGCCGCCACCACCCCAAAGCTGAGGAACACGATGGCTaGCACCAACATTTGTCTTCTATTCTCCACCAGGTGAATACCAAT | + |
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Preference number: 5 (lower is better) Translates to: TAERRHHPKAEEHDG*HQHLSSILHQVNTN Trigger: ATTGGTATTCACCTGGTGGAGAATAGAAGACAAATGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCGGCGTTCTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167505.3 |
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| CDS CCA 72 bp | CCCAAAGCTGAGGAACACGATGGCTGCCACCAACTGTaGTGTCCAGCAGAGCCAGAGGGCCTGGCACGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PKAEEHDGCHQL*CPAEPEGLARA Trigger: CGCCCGTGCCAGGCCCTCTGGCTCTGCTGGACACCACAGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| CDS GCA 72 bp | TCCCGCACTGAGAGGCCTTGGCTCAATGTGCCGCGCTaGGAACACGCTGTCGACTATGGCACAGCAGAACGC | + |
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Preference number: 6 (lower is better) Translates to: SRTERPWLNVPR*EHAVDYGTAER Trigger: GCGTTCTGCTGTGCCATAGTCGACAGCGTGTTCGCAGCGCGGCACATTGAGCCAAGGCCTCTCAGTGCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167071.9 ENSMUST00000167505.3 |
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| CDS TCA 72 bp | CTATGGCACAGCAGAACGCCGCCACCACCCCAAAGCTaGGGAACACGATGGCTGCCACCAACTGTGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LWHSRTPPPPQS*GTRWLPPTVVS Trigger: GGACACCACAGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCGGCGTTCTGCTGTGCCATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210804.2 |
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| CDS GCA 72 bp | CGCCGCCACCACCCCAAAGCTGAGGAACACGATGGCTaGCACCAAAATAATCCCTGGGTAGTAGCCGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RRHHPKAEEHDG*HQNNPWVVAAH Trigger: GTGGGCGGCTACTACCCAGGGATTATTTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167071.9 |
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| CDS GCA 72 bp | TGGCATCTTCCCGCACTGAGAGGCCTTGGCTCAATGTaGCGCGCTGCGAACACGCTGTCGACTATGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: WHLPALRGLGSM*RAANTLSTMAQ Trigger: CTGTGCCATAGTCGACAGCGTGTTCGCAGCGCGGCACATTGAGCCAAGGCCTCTCAGTGCGGGAAGATGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167071.9 ENSMUST00000167505.3 |
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| CDS TCA 72 bp | CAGCCCCACTGGAGTAAAACTGGCATCTTCCCGCACTaGGAGGCCTTGGCTCAATGTGCCGCGCTGCGAACA | + |
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Preference number: 6 (lower is better) Translates to: QPHWSKTGIFPH*EALAQCAALRT Trigger: TGTTCGCAGCGCGGCACATTGAGCCAAGGCCTCTCAGTGCGGGAAGATGCCAGTTTTACTCCAGTGGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167071.9 ENSMUST00000167505.3 |
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| CDS CCA 72 bp | GGAGTAAAACTGGCATCTTCCCGCACTGAGAGGCCTTaGCTCAATGTGCCGCGCTGCGAACACGCTGTCGAC | + |
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Preference number: 6 (lower is better) Translates to: GVKLASSRTERP*LNVPRCEHAVD Trigger: GTCGACAGCGTGTTCGCAGCGCGGCACATTGAGCCAAGGCCTCTCAGTGCGGGAAGATGCCAGTTTTACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167071.9 ENSMUST00000167505.3 |
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| CDS TCA 72 bp | CTATGGCACAGCAGAACGCCGCCACCACCCCAAAGCTaGGGAACACGATGGCTGCCACCAACATTTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LWHSRTPPPPQS*GTRWLPPTFVF Trigger: GAAGACAAATGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCGGCGTTCTGCTGTGCCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167505.3 |
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| CDS GCA 72 bp | CGCCGCCACCACCCCAAAGCTGAGGAACACGATGGCTaGCACCAACATTTGTCTTCTATTCTCCACCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRHHPKAEEHDG*HQHLSSILHQV Trigger: CACCTGGTGGAGAATAGAAGACAAATGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167505.3 |
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| CDS CAA 90 bp | CGCCACCACCCCAAAGCTGAGGAACACGATGGCTGCCACCAACATTaGTCTTCTATTCTCCACCAGGTGAATACCAATGATTCCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RHHPKAEEHDGCHQH*SSILHQVNTNDSQE Trigger: TTCCTGGGAATCATTGGTATTCACCTGGTGGAGAATAGAAGACAAATGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGGGTGGTGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167505.3 |
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| CDS CAA 72 bp | CCCAAAGCTGAGGAACACGATGGCTGCCACCAACATTaGTCTTCTATTCTCCACCAGGTGAATACCAATGAT | + |
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Preference number: 6 (lower is better) Translates to: PKAEEHDGCHQH*SSILHQVNTND Trigger: ATCATTGGTATTCACCTGGTGGAGAATAGAAGACAAATGTTGGTGGCAGCCATCGTGTTCCTCAGCTTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167505.3 |
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