Pregenerated sensors for TMEM255A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036502Ensembl transcript IDs: ENSMUST00000066498.8, ENSMUST00000089054.11, ENSMUST00000089056.10
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACACTTGTACTGTATAGAGGCGGAGCATCAGGAAATGCGTATCTaGAGAAGCCATGCTTCTTGCTGGACTGGCTCCCCAGCCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: PHLYCIEAEHQEMRI*RSHASCWTGSPALL Trigger: AAGCAGGGCTGGGGAGCCAGTCCAGCAAGAAGCATGGCTTCTTCAGATACGCATTTCCTGATGCTCCGCCTCTATACAGTACAAGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR GCA 90 bp | GCTGAGATCTACCGAAAACAGCACACATGTTGCTCTGTATTTCCGTaGTTCTCCATCAGCCGGTCATGGTCTCTCACCACTCAGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: AEIYRKQHTCCSVFP*FSISRSWSLTTQEK Trigger: CTTCTCCTGAGTGGTGAGAGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTGTTTTCGGTAGATCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR GCA 90 bp | AGTTGCCAGATGTATGCTGAGATCTACCGAAAACAGCACACATGTTaGTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: SCQMYAEIYRKQHTC*SVFPCFSISRSWSL Trigger: GAGAGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTGTTTTCGGTAGATCTCAGCATACATCTGGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR CCA 90 bp | GTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTaGAAATGTTTCCAGTGTGTGTTCTTGTGTTTGCAGAACTGTCTA | + |
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Preference number: 1 (lower is better) Translates to: VCCLQPSKKGGSEMG*KCFQCVFLCLQNCL Trigger: TAGACAGTTCTGCAAACACAAGAACACACACTGGAAACATTTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR CCA 90 bp | CATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATaGGCTGGAAATGTTTCCAGTGTGTGTTCTTGTGTTTGCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: HWSAASNHQRREAAK*AGNVSSVCSCVCRT Trigger: AGTTCTGCAAACACAAGAACACACACTGGAAACATTTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR TCA 90 bp | TTGCAAACATTTACCGTAACAGTGAGTGCACTTGTTGTGCCTTGGTaGTTCTTGATGACCAGGTGTCTACAAGGTAGATGGGAGCACCAG | + |
|
Preference number: 1 (lower is better) Translates to: LQTFTVTVSALVVPW*FLMTRCLQGRWEHQ Trigger: CTGGTGCTCCCATCTACCTTGTAGACACCTGGTCATCAAGAATCACCAAGGCACAACAAGTGCACTCACTGTTACGGTAAATGTTTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR GCA 90 bp | TTCAACCAAGGTGCTATCATAGTCATCTACCAAGGGCCCGAGGACTaGTGTCGTTTACTTAAAGTGAAACAGATGGCAACCACACTTGTA | + |
|
Preference number: 1 (lower is better) Translates to: FNQGAIIVIYQGPED*CRLLKVKQMATTLV Trigger: TACAAGTGTGGTTGCCATCTGTTTCACTTTAAGTAAACGACAGCAGTCCTCGGGCCCTTGGTAGATGACTATGATAGCACCTTGGTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR TCA 90 bp | CAACATATAGTAGGAACACTGTCTCCTAAGTTGCCAGATGTATGCTaGGATCTACCGAAAACAGCACACATGTTGCTCTGTATTTCCGTG | + |
|
Preference number: 1 (lower is better) Translates to: QHIVGTLSPKLPDVC*DLPKTAHMLLCISV Trigger: CACGGAAATACAGAGCAACATGTGTGCTGTTTTCGGTAGATCTCAGCATACATCTGGCAACTTAGGAGACAGTGTTCCTACTATATGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR GCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTCTGGCTCCCCAGCCCTaGTTAGTGAACTTGCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QHTCCSVFPCFSISRSWSLAPQP*LVNLLS Trigger: AGAAAGCAAGTTCACTAAGCAGGGCTGGGGAGCCAG...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR GCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCAGAAGCCATGCTTCTTaGTGGACTGGCTCCCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: VKAWVLESQQFDGLKLCIRSHAS*WTGSPA Trigger: GGCTGGGGAGCCAGTCCAGCAAGAAGCATGGCTTCT...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR TCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTACCAGCCACAAAAGCTaGATGATCACAACAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: QHTCCSVFPCFSISRSWSTSHKS*MITTAI Trigger: AATGGCTGTTGTGATCATTCAGCTTTTGTGGCTGGT...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAAAAACAGCACACATGTTaGTCTGTATTTCCGTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEKQHTC*SVFPCF Trigger: GAAGCACGGAAATACAGAGCAACATGTGTGCTGTTT...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCAAGCCATGCTTCTTGCTaGACTGGCTCCCCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSSHASC*TGSPAL Trigger: CAGGGCTGGGGAGCCAGTCCAGCAAGAAGCATGGCT...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCCAGATGAGTTTTCAGTaGTGGGGTGCAGGACCGTGC | + |
|
Preference number: 2 (lower is better) Translates to: VKAWVLESQQFDGLKLCIQMSFQ*WGAGPC Trigger: GCACGGTCCTGCACCCCACCACTGAAAACTCATCTG...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAAGTGATTCAACCAAGGTaGTATCATAGTCATCTACCA | + |
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Preference number: 2 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEVIQPR*YHSHLP Trigger: TGGTAGATGACTATGATAGCACCTTGGTTGAATCAC...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR TCA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAACAAGTTGGCTATATTTaGGGTCTTGAAGACTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEQVGYI*GLEDLK Trigger: TTTCAAGTCTTCAAGACCTCAAATATAGCCAACTTG...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CCA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAATATCTTTCCCTAGCTTaGCAAGCTGTTGTAAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEYLSLA*QAVVKL Trigger: AAGTTTTACAACAGCTTGCCAAGCTAGGGAAAGATA...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR GCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAAAGAAGCCATGCTTCTTaGTGGACTGGCTCCCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ILCNGAFKIHTFPTARGKRSHAS*WTGSPA Trigger: GGCTGGGGAGCCAGTCCAGCAAGAAGCATGGCTTCT...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR GCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCATATCTGAAGAAGCCATaGTTCTTGCTGGACTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSYLKKP*FLLDWL Trigger: GAGCCAGTCCAGCAAGAAGCATGGCTTCTTCAGATA...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATCTGGCTCCCCAGCCCTaGTTAGTGAACTTGCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYLAPQP*LVNLLS Trigger: AGAAAGCAAGTTCACTAAGCAGGGCTGGGGAGCCAG...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATGACCGTGCGGTTTGCTaGGGTGAAAGCACAATAGCT | + |
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Preference number: 2 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYDRAVC*GESTIA Trigger: AGCTATTGTGCTTTCACCCCAGCAAACCGCACGGTC...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAAAGGGAGGCAGCGAAATaGGCTGGAAATGTTTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: ILCNGAFKIHTFPTARGKREAAK*AGNVSS Trigger: ACTGGAAACATTTCCAGCCCATTTCGCTGCCTCCCT...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR TCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCCTATATTTGAGGTCTTaGAGACTTGAAATGGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: VKAWVLESQQFDGLKLCILYLRS*RLEMAL Trigger: CAATGCCATTTCAAGTCTTCAAGACCTCAAATATAG...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCTATCTTTCCCTAGCTTaGCAAGCTGTTGTAAAACTT | + |
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Preference number: 2 (lower is better) Translates to: VKAWVLESQQFDGLKLCIYLSLA*QAVVKL Trigger: AAGTTTTACAACAGCTTGCCAAGCTAGGGAAAGATA...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR CAA 90 bp | TTCAATATCCAGACACGAGCAAACAAAAAGCCACAACTTTCTGTATaGGAACTACTGTGTAGCCCAATCAGCTACGAAATTTTCCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: FNIQTRANKKPQLSV*ELLCSPISYEIFLR Trigger: TCTTAGGAAAATTTCGTAGCTGATTGGGCTACACAGTAGTTCCAATACAGAAAGTTGTGGCTTTTTGTTTGCTCGTGTCTGGATATTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATACCAGCCACAAAAGCTaGATGATCACAACAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYTSHKS*MITTAI Trigger: AATGGCTGTTGTGATCATTCAGCTTTTGTGGCTGGT...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR TCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAAGCCACAAAAGCTGAATaGTCACAACAGCCATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: ILCNGAFKIHTFPTARGKATKAE*SQQPFL Trigger: TAAAAATGGCTGTTGTGATCATTCAGCTTTTGTGGC...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATGCCACAAAAGCTGAATaGTCACAACAGCCATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYATKAE*SQQPFL Trigger: TAAAAATGGCTGTTGTGATCATTCAGCTTTTGTGGC...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR TCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAACAAGTTGGCTATATTTaGGGTCTTGAAGACTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: ILCNGAFKIHTFPTARGKQVGYI*GLEDLK Trigger: TTTCAAGTCTTCAAGACCTCAAATATAGCCAACTTG...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR TCA 72 bp | TACTGTATAGAGGCGGAGCATCAGGAAATGCGTATCTaGAGAAGCCATGCTTCTTGCTGGACTGGCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: YCIEAEHQEMRI*RSHASCWTGSP Trigger: TGGGGAGCCAGTCCAGCAAGAAGCATGGCTTCTTCAGATACGCATTTCCTGATGCTCCGCCTCTATACAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CAA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCAAGAAGCCATGCTTCTaGCTGGACTGGCTCCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: VKAWVLESQQFDGLKLCIKKPCF*LDWLPS Trigger: GCTGGGGAGCCAGTCCAGCAAGAAGCATGGCTTCTT...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR GCA 72 bp | TACCGAAAACAGCACACATGTTGCTCTGTATTTCCGTaGTTCTCCATCAGCCGGTCATGGTCTCTCACCACT | + |
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Preference number: 3 (lower is better) Translates to: YRKQHTCCSVFP*FSISRSWSLTT Trigger: AGTGGTGAGAGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTGTTTTCGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CAA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAAAAAACAGCACACATGTaGCTCTGTATTTCCGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEKTAHM*LCISVL Trigger: AAGCACGGAAATACAGAGCAACATGTGTGCTGTTTT...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CAA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAATTCCAGTGTGTGTTCTaGTGTTTGCAGAACTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEFQCVF*CLQNCL Trigger: TAGACAGTTCTGCAAACACAAGAACACACACTGGAA...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR GCA 72 bp | AAGATAGAGCCTATAGACCAGGTGATTCAACCAAGGTaGTATCATAGTCATCTACCAAGGGCCCGAGGACTG | + |
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Preference number: 3 (lower is better) Translates to: KIEPIDQVIQPR*YHSHLPRARGL Trigger: CAGTCCTCGGGCCCTTGGTAGATGACTATGATAGCACCTTGGTTGAATCACCTGGTCTATAGGCTCTATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR CCA 72 bp | CTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTaGAAATGTTTCCAGTGTGTGTTCTTGTGTTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: LQPSKKGGSEMG*KCFQCVFLCLQ Trigger: CTGCAAACACAAGAACACACACTGGAAACATTTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CAA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCAGATGGCAACCACACTaGTACTGTATAGAGGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: VKAWVLESQQFDGLKLCIRWQPH*YCIEAE Trigger: CTCCGCCTCTATACAGTACAAGTGTGGTTGCCATCT...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR TCA 72 bp | ACCAAGGGCCCGAGGACTGCTGTCGTTTACTTAAAGTaGAACAGATGGCAACCACACTTGTACTGTATAGAG | + |
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Preference number: 3 (lower is better) Translates to: TKGPRTAVVYLK*NRWQPHLYCIE Trigger: CTCTATACAGTACAAGTGTGGTTGCCATCTGTTTCACTTTAAGTAAACGACAGCAGTCCTCGGGCCCTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR GCA 72 bp | ATGTATGCTGAGATCTACCGAAAACAGCACACATGTTaGTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCA | + |
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Preference number: 3 (lower is better) Translates to: MYAEIYRKQHTC*SVFPCFSISRS Trigger: TGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTGTTTTCGGTAGATCTCAGCATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR TCA 72 bp | GTAGGAACACTGTCTCCTAAGTTGCCAGATGTATGCTaGGATCTACCGAAAACAGCACACATGTTGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: VGTLSPKLPDVC*DLPKTAHMLLC Trigger: ACAGAGCAACATGTGTGCTGTTTTCGGTAGATCTCAGCATACATCTGGCAACTTAGGAGACAGTGTTCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR TCA 72 bp | TTTACCGTAACAGTGAGTGCACTTGTTGTGCCTTGGTaGTTCTTGATGACCAGGTGTCTACAAGGTAGATGG | + |
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Preference number: 3 (lower is better) Translates to: FTVTVSALVVPW*FLMTRCLQGRW Trigger: CCATCTACCTTGTAGACACCTGGTCATCAAGAATCACCAAGGCACAACAAGTGCACTCACTGTTACGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CAA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATAAGAAGCCATGCTTCTaGCTGGACTGGCTCCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYKKPCF*LDWLPS Trigger: GCTGGGGAGCCAGTCCAGCAAGAAGCATGGCTTCTT...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR-3UTR CAA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCAAGATGGCAACCACACTaGTACTGTATAGAGGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSRWQPH*YCIEAE Trigger: CTCCGCCTCTATACAGTACAAGTGTGGTTGCCATCT...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| 3UTR GCA 72 bp | ACTGAATGTTTTGCAAACATTTACCGTAACAGTGAGTaGACTTGTTGTGCCTTGGTGATTCTTGATGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: TECFANIYRNSE*TCCALVILDDQ Trigger: CTGGTCATCAAGAATCACCAAGGCACAACAAGTGCACTCACTGTTACGGTAAATGTTTGCAAAACATTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAACCACAACTTTCTGTATaGGAACTACTGTGTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILCNGAFKIHTFPTARGKPQLSV*ELLCSP Trigger: TGGGCTACACAGTAGTTCCAATACAGAAAGTTGTGG...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| 3UTR CCA 72 bp | ATAATGAGTAAGCTTCATCCCTATCTTTCCCTAGCTTaGCAAGCTGTTGTAAAACTTGATGTAGAAGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: IMSKLHPYLSLA*QAVVKLDVEES Trigger: TGACTCTTCTACATCAAGTTTTACAACAGCTTGCCAAGCTAGGGAAAGATAGGGATGAAGCTTACTCATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAACAATCCTGTCCTTCCTaGATAATGAGTAAGCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ILCNGAFKIHTFPTARGKQSCPS*IMSKLH Trigger: ATGAAGCTTACTCATTATCAAGGAAGGACAGGATTG...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| 3UTR TCA 72 bp | TCAATAGCACTGGCTTCTTTACCTCTGTTAGTCATATaGAACCTTGTTCATTTCCCCAATTACTGTACATTT | + |
|
Preference number: 3 (lower is better) Translates to: SIALASLPLLVI*NLVHFPNYCTF Trigger: AAATGTACAGTAATTGGGGAAATGAACAAGGTTTCATATGACTAACAGAGGTAAAGAAGCCAGTGCTATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089056.10 |
||
| CDS-3UTR CCA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAAAACGGGGTGGCGCACTaGAGGACCACATGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGLLPPTIKEGRQRNGLENGVAH*RTTCSW Trigger: CCAGCTACATGTGGTCCTCCAGTGCGCCACCCCGTT...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTAGCAGAAGCAGGTGTTaGCCCGGATGCGAGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QHTCCSVFPCFSISRSWSSRSRC*PGCEVC Trigger: GCACACCTCGCATCCGGGGCAACACCTGCTTCTGCT...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAACCCACGGTCACATTCTaGGTCCTGGTAGTCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEPTVTF*VLVVAA Trigger: TGCTGCGACTACCAGGACCCAGAATGTGACCGTGGG...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTAGGTGGGTAGTAGGGTaGAGAATAACGGGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QHTCCSVFPCFSISRSWSRWVVG*RITGWR Trigger: GCGCCACCCCGTTATTCTCCACCCTACTACCCACCT...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTACAGGCCAACGATGTTaGGGATGGTGGCAGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHTCCSVFPCFSISRSWSTGQRC*GWWQTR Trigger: TCTGGTCTGCCACCATCCTCAACATCGTTGGCCTGT...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTTGGAGAATAACGGGGTaGCGCACTGGAGGACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QHTCCSVFPCFSISRSWSWRITG*RTGGPH Trigger: ATGTGGTCCTCCAGTGCGCCACCCCGTTATTCTCCA...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTAGTAGGTGGTACAGGTaGATGATGTCCTGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHTCCSVFPCFSISRSWSSRWYR*MMSWQL Trigger: CAGCTGCCAGGACATCATCCACCTGTACCACCTACT...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCGAAGGGACATGTCGCTaGACCGCTGCTGAGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKAWVLESQQFDGLKLCIEGTCR*TAAESG Trigger: CCCTGACTCAGCAGCGGTCCAGCGACATGTCCCTTC...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTAGAAGGAGGAGAGGATaGAAAGACACCGGAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHTCCSVFPCFSISRSWSRRRRG*KDTGML Trigger: CAGCATTCCGGTGTCTTTCCATCCTCTCCTCCTTCT...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCCATAGTAGCCGCCGGTaGTTTCCACCCTGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKAWVLESQQFDGLKLCIHSSRR*FPPCCH Trigger: GTGGCAACAGGGTGGAAATCACCGGCGGCTACTATG...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAAGTTCACCTCTTTAACTaGCTGGGTAAGGTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEVHLFN*LGKVPQ Trigger: TTGAGGAACCTTACCCAGGCAGTTAAAGAGGTGAAC...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCAGGTGTTGCCCCGGATaGGAGGTGTGCAAAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKAWVLESQQFDGLKLCIRCCPG*EVCKVH Trigger: GTGGACTTTGCACACCTCGCATCCGGGGCAACACCT...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTATAAGCAGAATACGGTaGCAGATGAGGAGGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QHTCCSVFPCFSISRSWSISRIR*QMRRAM Trigger: CATAGCCCTCCTCATCTGCCACCGTATTCTGCTTAT...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCTCCGCTTCCTCCTATTaGAGGCTCCCATGGAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: VKAWVLESQQFDGLKLCISASSY*RLPWNR Trigger: CCGATTCCATGGGAGCCTTCAATAGGAGGAAGCGGA...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCACCACATGTAGCTGGGTaGAGGAGAGGGCGATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSPHVAG*RRGRLG Trigger: CCCCAATCGCCCTCTCCTTCACCCAGCTACATGTGG...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTTCAAATCAATGTGTCTaGCGGCAAAGACCCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QHTCCSVFPCFSISRSWSSNQCV*RQRPHQ Trigger: TTGATGGGGTCTTTGCCGCCAGACACATTGATTTGA...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066498.8 |
||
| CDS-3UTR CCA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAATGGCTTTTCAAAAGGTaGGTAGTAGGGTGGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEWLFKR*VVGWRI Trigger: TATTCTCCACCCTACTACCCACCTTTTGAAAAGCCA...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCGAAGCCACCAGCATCTaGCGCTTGTTCTCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKAWVLESQQFDGLKLCIEATSI*RLFSIR Trigger: CCTGATTGAGAACAAGCGGCAGATGCTGGTGGCTTC...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | AGTCACACTTTAGATGTAACCTACACACTTCCACTAGAGCAGAAATACAAAAGCAGCAGAAGCAGGTGTTaGCCCGGATGCGAGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHTLDVTYTLPLEQKYKSSRSRC*PGCEVC Trigger: GCACACCTCGCATCCGGGGCAACACCTGCTTCTGCT...GCTTTTGTATTTCTGCTCTAGTGGAAGTGTGTAGGTTACATCTAAAGTGTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTTTAAGGACTGTAAGGTaGTGGCTTTTCAAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QHTCCSVFPCFSISRSWSLRTVR*WLFKRW Trigger: CCACCTTTTGAAAAGCCACCACCTTACAGTCCTTAA...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCATCCGCTTCCTCCTATTaGAGGCTCCCATGGAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSSASSY*RLPWNR Trigger: CCGATTCCATGGGAGCCTTCAATAGGAGGAAGCGGA...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAATATAGCACAACAAAATaGTGCAATCACACCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IGLLPPTIKEGRQRNGLEYSTTK*CNHTKA Trigger: AGCTTTGGTGTGATTGCAGCATTTTGTTGTGCTATA...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | AGTCACACTTTAGATGTAACCTACACACTTCCACTAGAGCAGAAATACAAAAGCACAGGCCAACGATGTTaGGGATGGTGGCAGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHTLDVTYTLPLEQKYKSTGQRC*GWWQTR Trigger: TCTGGTCTGCCACCATCCTCAACATCGTTGGCCTGT...GCTTTTGTATTTCTGCTCTAGTGGAAGTGTGTAGGTTACATCTAAAGTGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATCCACATGTAGCTGGGTaGAGGAGAGGGCGATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYPHVAG*RRGRLG Trigger: CCCCAATCGCCCTCTCCTTCACCCAGCTACATGTGG...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCAGAAGCCACCAGCATCTaGCGCTTGTTCTCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSEATSI*RLFSIR Trigger: CCTGATTGAGAACAAGCGGCAGATGCTGGTGGCTTC...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATGAAGGGACATGTCGCTaGACCGCTGCTGAGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYEGTCR*TAAESG Trigger: CCCTGACTCAGCAGCGGTCCAGCGACATGTCCCTTC...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATAACGGGGTGGCGCACTaGAGGACCACATGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYNGVAH*RTTCSW Trigger: CCAGCTACATGTGGTCCTCCAGTGCGCCACCCCGTT...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAAAGGTGGGTAGTAGGGTaGAGAATAACGGGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ILCNGAFKIHTFPTARGKRWVVG*RITGWR Trigger: GCGCCACCCCGTTATTCTCCACCCTACTACCCACCT...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCACAGCAAGGCCCACCGTaGGAATTAACATGGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSQQGPP*ELTWTQ Trigger: TTGTGTCCATGTTAATTCTCACGGTGGGCCTTGCTG...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATCATAGTAGCCGCCGGTaGTTTCCACCCTGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYHSSRR*FPPCCH Trigger: GTGGCAACAGGGTGGAAATCACCGGCGGCTACTATG...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATAGGTGTTGCCCCGGATaGGAGGTGTGCAAAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYRCCPG*EVCKVH Trigger: GTGGACTTTGCACACCTCGCATCCGGGGCAACACCT...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATCCCACGGTCACATTCTaGGTCCTGGTAGTCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYPTVTF*VLVVAA Trigger: TGCTGCGACTACCAGGACCCAGAATGTGACCGTGGG...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCAAGGTGGATGATGTCCTaGCAGCTGCTGACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSRWMMS*QLLTSM Trigger: CATTGATGTCAGCAGCTGCCAGGACATCATCCACCT...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | AGTCACACTTTAGATGTAACCTACACACTTCCACTAGAGCAGAAATACAAAAGCAGGACCACATGTAGCTaGGTGAAGGAGAGGGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: SHTLDVTYTLPLEQKYKSRTTCS*VKERAI Trigger: AATCGCCCTCTCCTTCACCCAGCTACATGTGGTCCT...GCTTTTGTATTTCTGCTCTAGTGGAAGTGTGTAGGTTACATCTAAAGTGTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCAGGACTGTAAGGTGGTaGCTTTTCAAAAGGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VKAWVLESQQFDGLKLCIRTVRW*LFKRWV Trigger: TACCCACCTTTTGAAAAGCCACCACCTTACAGTCCT...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | AGTCACACTTTAGATGTAACCTACACACTTCCACTAGAGCAGAAATACAAAAGCTGGATGAGGAAGTTATaGCCTCCTCAGCTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHTLDVTYTLPLEQKYKSWMRKL*PPQLPS Trigger: AGAGGGAAGCTGAGGAGGTCATAACTTCCTCATCCA...GCTTTTGTATTTCTGCTCTAGTGGAAGTGTGTAGGTTACATCTAAAGTGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066498.8 |
||
| CDS-3UTR CCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAACCCTCTGTGATGTCTTaGGAACATAGTGGCACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILCNGAFKIHTFPTARGKPSVMS*EHSGTG Trigger: ACCGGTGCCACTATGTTCCCAAGACATCACAGAGGG...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066498.8 |
||
| CDS-3UTR CCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAAAGGACCACATGTAGCTaGGTGAAGGAGAGGGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: ILCNGAFKIHTFPTARGKRTTCS*VKERAI Trigger: AATCGCCCTCTCCTTCACCCAGCTACATGTGGTCCT...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAACAGCAAGGCCCACCGTaGGAATTAACATGGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: ILCNGAFKIHTFPTARGKQQGPP*ELTWTQ Trigger: TTGTGTCCATGTTAATTCTCACGGTGGGCCTTGCTG...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAAGTAGGTATTGTACGATaGCACTTGGGGACGCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: ILCNGAFKIHTFPTARGKVGIVR*HLGTRI Trigger: TATGCGCGTCCCCAAGTGGCATCGTACAATACCTAC...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | AGTCACACTTTAGATGTAACCTACACACTTCCACTAGAGCAGAAATACAAAAGCGCCAAGAATAACTCCTaGGTAATAACCTCCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHTLDVTYTLPLEQKYKSAKNNS*VITSHG Trigger: ACCGTGGGAGGTTATTACCCAGGAGTTATTCTTGGC...GCTTTTGTATTTCTGCTCTAGTGGAAGTGTGTAGGTTACATCTAAAGTGTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCCCGGTTAGCATAGAGTaGTTTCAAATCAATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKAWVLESQQFDGLKLCIPVSIE*FQINVS Trigger: AGACACATTGATTTGAAACCACTCTATGCTAACCGG...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066498.8 |
||
| CDS-3UTR CCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAAAGGTGGATGATGTCCTaGCAGCTGCTGACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ILCNGAFKIHTFPTARGKRWMMS*QLLTSM Trigger: CATTGATGTCAGCAGCTGCCAGGACATCATCCACCT...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCAAGGACTGTAAGGTGGTaGCTTTTCAAAAGGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSRTVRW*LFKRWV Trigger: TACCCACCTTTTGAAAAGCCACCACCTTACAGTCCT...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| 3UTR CAA 72 bp | CAGACACGAGCAAACAAAAAGCCACAACTTTCTGTATaGGAACTACTGTGTAGCCCAATCAGCTACGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QTRANKKPQLSV*ELLCSPISYEI Trigger: AATTTCGTAGCTGATTGGGCTACACAGTAGTTCCAATACAGAAAGTTGTGGCTTTTTGTTTGCTCGTGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCAAGGAGTAATTTTGGATaGGGAAGTTATGACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSRSNFG*GSYDLL Trigger: GAGGAGGTCATAACTTCCTCATCCAAAATTACTCCT...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066498.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATGTAGGTATTGTACGATaGCACTTGGGGACGCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYVGIVR*HLGTRI Trigger: TATGCGCGTCCCCAAGTGGCATCGTACAATACCTAC...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAAATAAGCAGAATACGGTaGCAGATGAGGAGGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: ILCNGAFKIHTFPTARGKISRIR*QMRRAM Trigger: CATAGCCCTCCTCATCTGCCACCGTATTCTGCTTAT...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCATGGCTTTTCAAAAGGTaGGTAGTAGGGTGGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSWLFKR*VVGWRI Trigger: TATTCTCCACCCTACTACCCACCTTTTGAAAAGCCA...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGTGACATCAATTGTAGGGAAAGATAGAGCCTATAGACCAGGTGATTCATATAGCACAACAAAATaGTGCAATCACACCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSIVGKDRAYRPGDSYSTTK*CNHTKA Trigger: AGCTTTGGTGTGATTGCAGCATTTTGTTGTGCTATA...TGAATCACCTGGTCTATAGGCTCTATCTTTCCCTACAATTGATGTCACTCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATTTAAGGACTGTAAGGTaGTGGCTTTTCAAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYLRTVR*WLFKRW Trigger: CCACCTTTTGAAAAGCCACCACCTTACAGTCCTTAA...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| 3UTR CAA 72 bp | CTTGCAAGATTAAATAGGGATAATTTTGTTATCATTTaGGTGGTCACTATCCTCCACTCAGAGTCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LARLNRDNFVII*VVTILHSESLK Trigger: CTTCAGTGACTCTGAGTGGAGGATAGTGACCACCAAAATGATAACAAAATTATCCCTATTTAATCTTGCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089056.10 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATAGGAGTAATTTTGGATaGGGAAGTTATGACAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYRSNFG*GSYDNV Trigger: CACATTGTCATAACTTCCTCATCCAAAATTACTCCT...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089054.11 |
||
| CDS CCA 90 bp | AGGGTGGAGAATAACGGGGTGGCGCACTGGAGGACCACATGTAGCTaGGTGAAGGAGAGGGCGATTGGGGCTCCTGCTCATCGGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVENNGVAHWRTTCS*VKERAIGAPAHRRV Trigger: GACTCTCCGATGAGCAGGAGCCCCAATCGCCCTCTCCTTCACCCAGCTACATGTGGTCCTCCAGTGCGCCACCCCGTTATTCTCCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS TCA 90 bp | TGGAGAATAACGGGGTGGCGCACTGGAGGACCACATGTAGCTGGGTaGAGGAGAGGGCGATTGGGGCTCCTGCTCATCGGAGAGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WRITGWRTGGPHVAG*RRGRLGLLLIGESR Trigger: TCTGGACTCTCCGATGAGCAGGAGCCCCAATCGCCCTCTCCTTCACCCAGCTACATGTGGTCCTCCAGTGCGCCACCCCGTTATTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS TCA 90 bp | CAGGTGTTGCCCCGGATGCGAGGTGTGCAAAGTCCACGGCTAAGTTaGGGGCAGTTCACCTCTTTAACTGCCTGGGTAAGGTTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QVLPRMRGVQSPRLS*GQFTSLTAWVRFLK Trigger: TTTGAGGAACCTTACCCAGGCAGTTAAAGAGGTGAACTGCCCTCAACTTAGCCGTGGACTTTGCACACCTCGCATCCGGGGCAACACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS-3UTR CAA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAAAACAGGCCAACGATGTaGAGGATGGTGGCAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: IGLLPPTIKEGRQRNGLENRPTM*RMVADQ Trigger: CTGGTCTGCCACCATCCTCAACATCGTTGGCCTGTT...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CAA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTAACAGGCCAACGATGTaGAGGATGGTGGCAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QHTCCSVFPCFSISRSWSNRPTM*RMVADQ Trigger: CTGGTCTGCCACCATCCTCAACATCGTTGGCCTGTT...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CAA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTTTCCGCTTCCTCCTATaGAAGGCTCCCATGGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: QHTCCSVFPCFSISRSWSFRFLL*KAPMES Trigger: CGATTCCATGGGAGCCTTCAATAGGAGGAAGCGGAA...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CAA 90 bp | ATTGGTCTGCTGCCTCCAACCATCAAAGAAGGGAGGCAGCGAAATGGGCTGGAAACCAGCATCTGCCGCTaGTTCTCAATCAGGTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IGLLPPTIKEGRQRNGLETSICR*FSIRFD Trigger: GTCAAACCTGATTGAGAACAAGCGGCAGATGCTGGT...TTCCAGCCCATTTCGCTGCCTCCCTTCTTTGATGGTTGGAGGCAGCAGACCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CAA 90 bp | GTGAAGGCATGGGTGCTAGAGTCTCAACAGTTTGATGGTTTAAAGCTCTGTATCCAGCAGAAGCAGGTGTaGCCCCGGATGCGAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VKAWVLESQQFDGLKLCIQQKQV*PRMRGV Trigger: CACACCTCGCATCCGGGGCAACACCTGCTTCTGCTG...GATACAGAGCTTTAAACCATCAAACTGTTGAGACTCTAGCACCCATGCCTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CAA 90 bp | CAGCACACATGTTGCTCTGTATTTCCGTGCTTCTCCATCAGCCGGTCATGGTCTATTGTACGATGCCACTaGGGGACGCGCATAGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QHTCCSVFPCFSISRSWSIVRCH*GTRIVR Trigger: TCTTACTATGCGCGTCCCCAAGTGGCATCGTACAAT...AGACCATGACCGGCTGATGGAGAAGCACGGAAATACAGAGCAACATGTGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS GCA 90 bp | ATACGGTGGCAGATGAGGAGGGCTATGGTAGTAGGTATTGTACGATaGCACTTGGGGACGCGCATAGTAAGAAACAGTTGGATGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: IRWQMRRAMVVGIVR*HLGTRIVRNSWMGI Trigger: AATGCCCATCCAACTGTTTCTTACTATGCGCGTCCCCAAGTGGCATCGTACAATACCTACTACCATAGCCCTCCTCATCTGCCACCGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS CCA 90 bp | GGTATTGTACGATGCCACTTGGGGACGCGCATAGTAAGAAACAGTTaGATGGGCATTTTCAACAGAGCAGTTCAGTGCCGGAAGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GIVRCHLGTRIVRNS*MGIFNRAVQCRKSR Trigger: CCTACTCTTCCGGCACTGAACTGCTCTGTTGAAAATGCCCATCCAACTGTTTCTTACTATGCGCGTCCCCAAGTGGCATCGTACAATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS TCA 90 bp | CTGGGTAAGGTTCCTCAAAGCCCTCGTAGAAGGAGTAATTTTGGATaGGGAAGTTATGACAATGTGTCTGGCGGCAAAGACCCCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGKVPQSPRRRSNFG*GSYDNVSGGKDPIN Trigger: GTTGATGGGGTCTTTGCCGCCAGACACATTGTCATAACTTCCTCATCCAAAATTACTCCTTCTACGAGGGCTTTGAGGAACCTTACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089054.11 |
||
| CDS GCA 90 bp | TGTGCAAAGTCCACGGCTAAGTTGAGGGCAGTTCACCTCTTTAACTaGCTGGGTAAGGTTCCTCAAAGCCCTCGTAGAAGGAGTAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: CAKSTAKLRAVHLFN*LGKVPQSPRRRSNF Trigger: AAAATTACTCCTTCTACGAGGGCTTTGAGGAACCTTACCCAGGCAGTTAAAGAGGTGAACTGCCCTCAACTTAGCCGTGGACTTTGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS-3UTR CAA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAACAGCAGAAGCAGGTGTaGCCCCGGATGCGAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ILCNGAFKIHTFPTARGKQQKQV*PRMRGV Trigger: CACACCTCGCATCCGGGGCAACACCTGCTTCTGCTG...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS GCA 90 bp | ATAGTAAGAAACAGTTGGATGGGCATTTTCAACAGAGCAGTTCAGTaGCGGAAGAGTAGGGTTCATATCCTTAAATCCCCCAAGGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: IVRNSWMGIFNRAVQ*RKSRVHILKSPKDR Trigger: GCGGTCCTTGGGGGATTTAAGGATATGAACCCTACTCTTCCGGCACTGAACTGCTCTGTTGAAAATGCCCATCCAACTGTTTCTTACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS CCA 90 bp | TTCAACACACCACGAGAATACCTGAAAGTCATAAGCAGAATACGGTaGCAGATGAGGAGGGCTATGGTAGTAGGTATTGTACGATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FNTPREYLKVISRIR*QMRRAMVVGIVRCH Trigger: GTGGCATCGTACAATACCTACTACCATAGCCCTCCTCATCTGCCACCGTATTCTGCTTATGACTTTCAGGTATTCTCGTGGTGTGTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089056.10 |
||
| CDS-3UTR CAA 90 bp | AGTCACACTTTAGATGTAACCTACACACTTCCACTAGAGCAGAAATACAAAAGCATTGTACGATGCCACTaGGGGACGCGCATAGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SHTLDVTYTLPLEQKYKSIVRCH*GTRIVR Trigger: TCTTACTATGCGCGTCCCCAAGTGGCATCGTACAAT...GCTTTTGTATTTCTGCTCTAGTGGAAGTGTGTAGGTTACATCTAAAGTGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CAA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATTTCCGCTTCCTCCTATaGAAGGCTCCCATGGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYFRFLL*KAPMES Trigger: CGATTCCATGGGAGCCTTCAATAGGAGGAAGCGGAA...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CAA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATACCAGCATCTGCCGCTaGTTCTCAATCAGGTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYTSICR*FSIRFD Trigger: GTCAAACCTGATTGAGAACAAGCGGCAGATGCTGGT...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS-3UTR CAA 90 bp | ATACTTTGTAATGGTGCCTTTAAAATACACACATTCCCTACAGCAAGGGGTAAAGTAGAAGGAGTAATTTaGGATGAGGAAGTTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: ILCNGAFKIHTFPTARGKVEGVI*DEEVMT Trigger: GGTCATAACTTCCTCATCCAAAATTACTCCTTCTAC...TTTACCCCTTGCTGTAGGGAATGTGTGTATTTTAAAGGCACCATTACAAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066498.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTGGGTTTCCAACGTGGCAGTGATACAAATTTTAAGCAACATCTATTTTATGTAGAAGGAGTAATTTaGGATGAGGAAGTTATGACA | + |
|
Preference number: 5 (lower is better) Translates to: CLGFQRGSDTNFKQHLFYVEGVI*DEEVMT Trigger: TGTCATAACTTCCTCATCCAAAATTACTCCTTCTAC...ATAAAATAGATGTTGCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089054.11 |
||
| CDS CCA 72 bp | GTGGGTAGTAGGGTGGAGAATAACGGGGTGGCGCACTaGAGGACCACATGTAGCTGGGTGAAGGAGAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VGSRVENNGVAH*RTTCSWVKERA Trigger: CGCCCTCTCCTTCACCCAGCTACATGTGGTCCTCCAGTGCGCCACCCCGTTATTCTCCACCCTACTACCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS TCA 72 bp | CCCCGGATGCGAGGTGTGCAAAGTCCACGGCTAAGTTaGGGGCAGTTCACCTCTTTAACTGCCTGGGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRMRGVQSPRLS*GQFTSLTAWVR Trigger: CCTTACCCAGGCAGTTAAAGAGGTGAACTGCCCTCAACTTAGCCGTGGACTTTGCACACCTCGCATCCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS CAA 72 bp | GCCCCGGATGCGAGGTGTGCAAAGTCCACGGCTAAGTaGAGGGCAGTTCACCTCTTTAACTGCCTGGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: APDARCAKSTAK*RAVHLFNCLGK Trigger: CTTACCCAGGCAGTTAAAGAGGTGAACTGCCCTCAACTTAGCCGTGGACTTTGCACACCTCGCATCCGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS CAA 90 bp | GCAGGTGTTGCCCCGGATGCGAGGTGTGCAAAGTCCACGGCTAAGTaGAGGGCAGTTCACCTCTTTAACTGCCTGGGTAAGGTTCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGVAPDARCAKSTAK*RAVHLFNCLGKVPQ Trigger: TTGAGGAACCTTACCCAGGCAGTTAAAGAGGTGAACTGCCCTCAACTTAGCCGTGGACTTTGCACACCTCGCATCCGGGGCAACACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS CCA 72 bp | CGATGCCACTTGGGGACGCGCATAGTAAGAAACAGTTaGATGGGCATTTTCAACAGAGCAGTTCAGTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RCHLGTRIVRNS*MGIFNRAVQCR Trigger: CCGGCACTGAACTGCTCTGTTGAAAATGCCCATCCAACTGTTTCTTACTATGCGCGTCCCCAAGTGGCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS CCA 72 bp | CTCCTGCTCATCGGAGAGTCCAGAAGGAGGAGAGGATaGAAAGACACCGGAATGCTGAAAGTCATAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLLIGESRRRRG*KDTGMLKVISR Trigger: TCTGCTTATGACTTTCAGCATTCCGGTGTCTTTCCATCCTCTCCTCCTTCTGGACTCTCCGATGAGCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
||
| CDS CAA 72 bp | AGGAGGGCTATGGTAGTAGGTATTGTACGATGCCACTaGGGGACGCGCATAGTAAGAAACAGTTGGATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRAMVVGIVRCH*GTRIVRNSWMG Trigger: GCCCATCCAACTGTTTCTTACTATGCGCGTCCCCAAGTGGCATCGTACAATACCTACTACCATAGCCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS GCA 72 bp | CAGATGAGGAGGGCTATGGTAGTAGGTATTGTACGATaGCACTTGGGGACGCGCATAGTAAGAAACAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QMRRAMVVGIVR*HLGTRIVRNSW Trigger: CCAACTGTTTCTTACTATGCGCGTCCCCAAGTGGCATCGTACAATACCTACTACCATAGCCCTCCTCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
||
| CDS CCA 72 bp | TGTCTTGGGAACATAGTGGCACCGGTTAGCATAGAGTaGTTTCAAATCAATGTGTCTGGCGGCAAAGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: CLGNIVAPVSIE*FQINVSGGKDP Trigger: GGGGTCTTTGCCGCCAGACACATTGATTTGAAACCACTCTATGCTAACCGGTGCCACTATGTTCCCAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089056.10 |
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| CDS CAA 72 bp | CTGATAAACACGATAGAAGCCACCAGCATCTGCCGCTaGTTCTCAATCAGGTTTGACCCGATGATCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LINTIEATSICR*FSIRFDPMIPR Trigger: CCTTGGGATCATCGGGTCAAACCTGATTGAGAACAAGCGGCAGATGCTGGTGGCTTCTATCGTGTTTATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
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| CDS CAA 90 bp | ACTGCCTGGGTAAGGTTCCTCAAAGCCCTCGTAGAAGGAGTAATTTaGGATGAGGAAGTTATGACCTCCTCAGCTTCCCTCTGTGATGTC | + |
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Preference number: 6 (lower is better) Translates to: TAWVRFLKALVEGVI*DEEVMTSSASLCDV Trigger: GACATCACAGAGGGAAGCTGAGGAGGTCATAACTTCCTCATCCAAAATTACTCCTTCTACGAGGGCTTTGAGGAACCTTACCCAGGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089056.10 |
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| CDS CAA 90 bp | TGGCAGATGAGGAGGGCTATGGTAGTAGGTATTGTACGATGCCACTaGGGGACGCGCATAGTAAGAAACAGTTGGATGGGCATTTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: WQMRRAMVVGIVRCH*GTRIVRNSWMGIFN Trigger: GTTGAAAATGCCCATCCAACTGTTTCTTACTATGCGCGTCCCCAAGTGGCATCGTACAATACCTACTACCATAGCCCTCCTCATCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
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| CDS CAA 90 bp | ACTGCCTGGGTAAGGTTCCTCAAAGCCCTCGTAGAAGGAGTAATTTaGGATGAGGAAGTTATGACAATGTGTCTGGCGGCAAAGACCCCA | + |
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Preference number: 6 (lower is better) Translates to: TAWVRFLKALVEGVI*DEEVMTMCLAAKTP Trigger: TGGGGTCTTTGCCGCCAGACACATTGTCATAACTTCCTCATCCAAAATTACTCCTTCTACGAGGGCTTTGAGGAACCTTACCCAGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089054.11 |
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| CDS GCA 72 bp | AACAGTTGGATGGGCATTTTCAACAGAGCAGTTCAGTaGCGGAAGAGTAGGGTTCATATCCTTAAATCCCCC | + |
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Preference number: 6 (lower is better) Translates to: NSWMGIFNRAVQ*RKSRVHILKSP Trigger: GGGGGATTTAAGGATATGAACCCTACTCTTCCGGCACTGAACTGCTCTGTTGAAAATGCCCATCCAACTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 ENSMUST00000089056.10 |
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| CDS CCA 72 bp | GACACCGGAATGCTGAAAGTCATAAGCAGAATACGGTaGCAGATGAGGAGGGCTATGGTAGTAGGTATTGTA | + |
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Preference number: 6 (lower is better) Translates to: DTGMLKVISRIR*QMRRAMVVGIV Trigger: TACAATACCTACTACCATAGCCCTCCTCATCTGCCACCGTATTCTGCTTATGACTTTCAGCATTCCGGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066498.8 ENSMUST00000089054.11 |
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| CDS TCA 72 bp | GTTCCTCAAAGCCCTCGTAGAAGGAGTAATTTTGGATaGGGAAGTTATGACAATGTGTCTGGCGGCAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: VPQSPRRRSNFG*GSYDNVSGGKD Trigger: GTCTTTGCCGCCAGACACATTGTCATAACTTCCTCATCCAAAATTACTCCTTCTACGAGGGCTTTGAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089054.11 |
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| CDS CCA 72 bp | CCACGAGAATACCTGAAAGTCATAAGCAGAATACGGTaGCAGATGAGGAGGGCTATGGTAGTAGGTATTGTA | + |
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Preference number: 6 (lower is better) Translates to: PREYLKVISRIR*QMRRAMVVGIV Trigger: TACAATACCTACTACCATAGCCCTCCTCATCTGCCACCGTATTCTGCTTATGACTTTCAGGTATTCTCGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089056.10 |
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| CDS CAA 72 bp | GTAAGGTTCCTCAAAGCCCTCGTAGAAGGAGTAATTTaGGATGAGGAAGTTATGACAATGTGTCTGGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: VRFLKALVEGVI*DEEVMTMCLAA Trigger: TGCCGCCAGACACATTGTCATAACTTCCTCATCCAAAATTACTCCTTCTACGAGGGCTTTGAGGAACCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089054.11 |
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