Pregenerated sensors for TMEM254A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072676Ensembl transcript IDs: ENSMUST00000100811.6, ENSMUST00000100813.5, ENSMUST00000185006.9
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGGGACTGAGCTGAGAGGGTTAGGGAGGGAAGTTGGACTTCTCTaGGTTCTGAGTACACCTTCTGGTGTAGCTTCACCTTTGAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: GGTELRGLGREVGLL*VLSTPSGVASPLRL Trigger: AAGCCTCAAAGGTGAAGCTACACCAGAAGGTGTACTCAGAACTCAGAGAAGTCCAACTTCCCTCCCTAACCCTCTCAGCTCAGTCCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR CCA 90 bp | GTTAGGGAGGGAAGTTGGACTTCTCTGAGTTCTGAGTACACCTTCTaGTGTAGCTTCACCTTTGAGGCTTTATCAGCATTATGGATATCA | + |
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Preference number: 1 (lower is better) Translates to: VREGSWTSLSSEYTF*CSFTFEALSALWIS Trigger: TGATATCCATAATGCTGATAAAGCCTCAAAGGTGAAGCTACACCAGAAGGTGTACTCAGAACTCAGAGAAGTCCAACTTCCCTCCCTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR TCA 90 bp | GTCCCGTTCAAGGACACGCAATCCACAGTCATTTATTTCATACTTTaGCCAGCTGTCTCTACAGAAGACACTGTGTATGGGATTCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: VPFKDTQSTVIYFIL*PAVSTEDTVYGILY Trigger: ATAAAGAATCCCATACACAGTGTCTTCTGTAGAGACAGCTGGTCAAAGTATGAAATAAATGACTGTGGATTGCGTGTCCTTGAACGGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR CCA 90 bp | GAGACATCACGATCAAGAGAACTCTTACAAAGGGGAACATTTAATTaGGGCTGGTTTATAATTTCGGAGGCTCAGTCCATTATCATCATG | + |
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Preference number: 1 (lower is better) Translates to: ETSRSRELLQRGTFN*GWFIISEAQSIIIM Trigger: CATGATGATAATGGACTGAGCCTCCGAAATTATAAACCAGCCCCAATTAAATGTTCCCCTTTGTAAGAGTTCTCTTGATCGTGATGTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR-3UTR TCA 90 bp | CATATAGATGTCCCGTTCAAGGACACGCAATCCACAGTCATTTATTTCATACTTGGCGTGGGGTGGGACTaGGCTGAGAGGGTTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HIDVPFKDTQSTVIYFILGVGWD*AERVRE Trigger: CTCCCTAACCCTCTCAGCTCAGTCCCACCCCACGCC...AAGTATGAAATAAATGACTGTGGATTGCGTGTCCTTGAACGGGACATCTATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR-3UTR TCA 90 bp | TTACAAAGGGGAACATTTAATTGGGGCTGGTTTATAATTTCGGAGGCTCAGTCCGAGAGTTCTACATCTTaGTCTAAAGGCAGCGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LQRGTFNWGWFIISEAQSESSTS*SKGSGR Trigger: CCTTCCGCTGCCTTTAGATCAAGATGTAGAACTCTC...GGACTGAGCCTCCGAAATTATAAACCAGCCCCAATTAAATGTTCCCCTTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR CAA 90 bp | TGTCCCGTTCAAGGACACGCAATCCACAGTCATTTATTTCATACTTaGACCAGCTGTCTCTACAGAAGACACTGTGTATGGGATTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: CPVQGHAIHSHLFHT*TSCLYRRHCVWDSL Trigger: TAAAGAATCCCATACACAGTGTCTTCTGTAGAGACAGCTGGTCAAAGTATGAAATAAATGACTGTGGATTGCGTGTCCTTGAACGGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR-3UTR CCA 90 bp | CATATAGATGTCCCGTTCAAGGACACGCAATCCACAGTCATTTATTTCATACTTAGGGGAACATTTAATTaGGGCTGGTTTATAATTTCG | + |
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Preference number: 2 (lower is better) Translates to: HIDVPFKDTQSTVIYFILRGTFN*GWFIIS Trigger: CGAAATTATAAACCAGCCCCAATTAAATGTTCCCCT...AAGTATGAAATAAATGACTGTGGATTGCGTGTCCTTGAACGGGACATCTATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR TCA 72 bp | AAGACAGGGAGGCCATCATGGTACCCAGGGCCCCACTaGAAGGAGGGCTTGAAGAGGTGGAGAGAAACTTGC | + |
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Preference number: 3 (lower is better) Translates to: KTGRPSWYPGPH*KEGLKRWRETC Trigger: GCAAGTTTCTCTCCACCTCTTCAAGCCCTCCTTTCAGTGGGGCCCTGGGTACCATGATGGCCTCCCTGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100811.6 ENSMUST00000185006.9 |
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| 3UTR GCA 72 bp | AACCAGAGGGTCTCAGGCAGGTTCTTCGACAGACACTaGCTAGAAGACAGGGAGGCCATCATGGTACCCAGG | + |
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Preference number: 3 (lower is better) Translates to: NQRVSGRFFDRH*LEDREAIMVPR Trigger: CCTGGGTACCATGATGGCCTCCCTGTCTTCTAGGCAGTGTCTGTCGAAGAACCTGCCTGAGACCCTCTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100811.6 ENSMUST00000185006.9 |
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| 3UTR TCA 72 bp | GAAAATGACTCAGCTAAGGACCTCAGGAAAGTGGCCTaGGGCCATCTTCAGGCAGGAGGTCTGCAGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: ENDSAKDLRKVA*GHLQAGGLQSW Trigger: CCAGCTCTGCAGACCTCCTGCCTGAAGATGGCCTCAGGCCACTTTCCTGAGGTCCTTAGCTGAGTCATTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100811.6 ENSMUST00000185006.9 |
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| 3UTR CCA 72 bp | GGCAGGAAAATGACTCAGCTAAGGACCTCAGGAAAGTaGCCTGAGGCCATCTTCAGGCAGGAGGTCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GRKMTQLRTSGK*PEAIFRQEVCR Trigger: TCTGCAGACCTCCTGCCTGAAGATGGCCTCAGGCCACTTTCCTGAGGTCCTTAGCTGAGTCATTTTCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100811.6 ENSMUST00000185006.9 |
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| 3UTR CCA 72 bp | TGTTGTTGGTTATCTAAAAGGAACTGCAGGCCTTCCTaGTACCAAACACCAGGAGCTGCTGTGCCTGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: CCWLSKRNCRPS*YQTPGAAVPAQ Trigger: CTGGGCAGGCACAGCAGCTCCTGGTGTTTGGTACCAGGAAGGCCTGCAGTTCCTTTTAGATAACCAACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100813.5 |
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| 3UTR TCA 72 bp | GAGCTGAGAGGGTTAGGGAGGGAAGTTGGACTTCTCTaGGTTCTGAGTACACCTTCTGGTGTAGCTTCACCT | + |
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Preference number: 3 (lower is better) Translates to: ELRGLGREVGLL*VLSTPSGVASP Trigger: AGGTGAAGCTACACCAGAAGGTGTACTCAGAACTCAGAGAAGTCCAACTTCCCTCCCTAACCCTCTCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR CCA 72 bp | GTGACAGATGTTAAAACCAGATTGCCCTCACATCTATaGACGGCTCTTTCATTCTCTCTGTCCCCTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: VTDVKTRLPSHL*TALSFSLSPLP Trigger: AGGCAGAGGGGACAGAGAGAATGAAAGAGCCGTCCATAGATGTGAGGGCAATCTGGTTTTAACATCTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR CCA 72 bp | GGAAGTTGGACTTCTCTGAGTTCTGAGTACACCTTCTaGTGTAGCTTCACCTTTGAGGCTTTATCAGCATTA | + |
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Preference number: 3 (lower is better) Translates to: GSWTSLSSEYTF*CSFTFEALSAL Trigger: TAATGCTGATAAAGCCTCAAAGGTGAAGCTACACCAGAAGGTGTACTCAGAACTCAGAGAAGTCCAACTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR-3UTR CAA 90 bp | ACCCACACCAACCTAGGGTATTTTATGACAGAGCCTCTGTCCACTTTTGTCTATTCACACTGGCTAGACTaGAGCAAATATATGAGACCT | + |
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Preference number: 3 (lower is better) Translates to: THTNLGYFMTEPLSTFVYSHWLD*SKYMRP Trigger: AGGTCTCATATATTTGCTCAAGTCTAGCCAGTGTGA...ATAGACAAAAGTGGACAGAGGCTCTGTCATAAAATACCCTAGGTTGGTGTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR TCA 72 bp | AAGGACACGCAATCCACAGTCATTTATTTCATACTTTaGCCAGCTGTCTCTACAGAAGACACTGTGTATGGG | + |
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Preference number: 3 (lower is better) Translates to: KDTQSTVIYFIL*PAVSTEDTVYG Trigger: CCCATACACAGTGTCTTCTGTAGAGACAGCTGGTCAAAGTATGAAATAAATGACTGTGGATTGCGTGTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR CCA 72 bp | TGGTGTAGCTTCACCTTTGAGGCTTTATCAGCATTATaGATATCAAGGGTACACTACAGAGAGAGGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: WCSFTFEALSAL*ISRVHYRERKR Trigger: TCTCTTCCTCTCTCTGTAGTGTACCCTTGATATCCATAATGCTGATAAAGCCTCAAAGGTGAAGCTACACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR TCA 72 bp | GAAATAGAAAGCTATAAACCCTGGCAACCAATGGGGTaGCAGATGTTAAAACCAGATTGCCCTCACATCTAT | + |
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Preference number: 3 (lower is better) Translates to: EIESYKPWQPMG*QMLKPDCPHIY Trigger: ATAGATGTGAGGGCAATCTGGTTTTAACATCTGTCACCCCATTGGTTGCCAGGGTTTATAGCTTTCTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR CCA 72 bp | AGAGAACTCTTACAAAGGGGAACATTTAATTGGGGCTaGTTTATAATTTCGGAGGCTCAGTCCATTATCATC | + |
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Preference number: 3 (lower is better) Translates to: RELLQRGTFNWG*FIISEAQSIII Trigger: GATGATAATGGACTGAGCCTCCGAAATTATAAACCAGCCCCAATTAAATGTTCCCCTTTGTAAGAGTTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR CCA 72 bp | CAAAAGAACTCAGATGCATGTGGAACTGATGTTATGTaGAAGTTTTACTTTATCTTGGTCCAGAACCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: QKNSDACGTDVM*KFYFILVQNQK Trigger: TTTCTGGTTCTGGACCAAGATAAAGTAAAACTTCCACATAACATCAGTTCCACATGCATCTGAGTTCTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| CDS-3UTR TCA 90 bp | AACAAGGCCACATACCTCCTAGTAGTGCCACTTCCCATGGGCCAAGCATATTCACCACCAAATACTTCGTaGAGGGACCCAGGGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: NKATYLLVVPLPMGQAYSPPNTS*RDPGAQ Trigger: TTGGGCCCCTGGGTCCCTTCACGAAGTATTTGGTGG...TGAATATGCTTGGCCCATGGGAAGTGGCACTACTAGGAGGTATGTGGCCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100811.6 ENSMUST00000185006.9 |
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| CDS-3UTR TCA 90 bp | GAACATGATCCGGAAAAGGAGCTGAGAGTTCTACATCTTGATCTAAAGGCAGCGCCACCAAATACTTCGTaGAGGGACCCAGGGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: EHDPEKELRVLHLDLKAAPPNTS*RDPGAQ Trigger: TTGGGCCCCTGGGTCCCTTCACGAAGTATTTGGTGG...CGCTGCCTTTAGATCAAGATGTAGAACTCTCAGCTCCTTTTCCGGATCATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100811.6 ENSMUST00000185006.9 |
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| 3UTR CAA 72 bp | AGGAGCTGGGCCTGGACGTCTGTGATTCCTTTACGCTaGCATAAAACCAAGGCATACAAGGACTCTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: RSWAWTSVIPLR*HKTKAYKDSPT Trigger: TGTGGGAGAGTCCTTGTATGCCTTGGTTTTATGCAAGCGTAAAGGAATCACAGACGTCCAGGCCCAGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100813.5 |
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| CDS-3UTR CCA 90 bp | AATAATAGTAACCAGAGGGTCTCAGGCAGGTTCTTCGACAGACACTGCCTAGAAGTGAGGGCCAGAGTCTaGCTACACGGAAGTATGCAG | + |
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Preference number: 4 (lower is better) Translates to: NNSNQRVSGRFFDRHCLEVRARV*LHGSMQ Trigger: CTGCATACTTCCGTGTAGCCAGACTCTGGCCCTCAC...TTCTAGGCAGTGTCTGTCGAAGAACCTGCCTGAGACCCTCTGGTTACTATTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100811.6 |
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| CDS-3UTR TCA 90 bp | TTCCTTTACGCTTGCATAAAACCAAGGCATACAAGGACTCTCCCACATGAATTACCACCAAATACTTCGTaGAGGGACCCAGGGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: FLYACIKPRHTRTLPHELPPNTS*RDPGAQ Trigger: TTGGGCCCCTGGGTCCCTTCACGAAGTATTTGGTGG...TAATTCATGTGGGAGAGTCCTTGTATGCCTTGGTTTTATGCAAGCGTAAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100813.5 |
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| CDS-3UTR CCA 90 bp | AAGGAGCTGAGAGTTCTACATCTTGATCTAAAGGCAGCGGAAGGAGACCGTTTCTGTAAGCAATCAGGATaGAGAGAGAGGCTACACCAA | + |
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Preference number: 4 (lower is better) Translates to: KELRVLHLDLKAAEGDRFCKQSG*RERLHQ Trigger: TTGGTGTAGCCTCTCTCTCCATCCTGATTGCTTACA...GAAACGGTCTCCTTCCGCTGCCTTTAGATCAAGATGTAGAACTCTCAGCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100811.6 ENSMUST00000185006.9 |
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| CDS-3UTR CCA 90 bp | CGTTCAGGAGAAACCAAAAGAACTCAGATGCATGTGGAACTGATGTTATGTGGATGTAAGCAATCAGGATaGAGAGAGAGGCTACACCAA | + |
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Preference number: 4 (lower is better) Translates to: RSGETKRTQMHVELMLCGCKQSG*RERLHQ Trigger: TTGGTGTAGCCTCTCTCTCCATCCTGATTGCTTACA...TCCACATAACATCAGTTCCACATGCATCTGAGTTCTTTTGGTTTCTCCTGAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| 3UTR CAA 72 bp | CAAGGACACGCAATCCACAGTCATTTATTTCATACTTaGACCAGCTGTCTCTACAGAAGACACTGTGTATGG | + |
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Preference number: 4 (lower is better) Translates to: QGHAIHSHLFHT*TSCLYRRHCVW Trigger: CCATACACAGTGTCTTCTGTAGAGACAGCTGGTCAAAGTATGAAATAAATGACTGTGGATTGCGTGTCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185006.9 |
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| CDS TCA 90 bp | GAGGCCAGAAGACAGCCCACGCGAAGTAGCCCAGCCCTAGGGCGGTaGTCAGTGAGGGCCAGAGTCTGGCTACACGGAAGTATGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: EARRQPTRSSPALGR*SVRARVWLHGSMQW Trigger: CCACTGCATACTTCCGTGTAGCCAGACTCTGGCCCTCACTGATCACCGCCCTAGGGCTGGGCTACTTCGCGTGGGCTGTCTTCTGGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100811.6 |
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| CDS CCA 72 bp | GTGAGGGCCAGAGTCTGGCTACACGGAAGTATGCAGTaGGGTCCCTACGGGCCTCCGACTTCGCCACCACCA | + |
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Preference number: 6 (lower is better) Translates to: VRARVWLHGSMQ*GPYGPPTSPPP Trigger: TGGTGGTGGCGAAGTCGGAGGCCCGTAGGGACCCCACTGCATACTTCCGTGTAGCCAGACTCTGGCCCTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100811.6 |
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| CDS TCA 72 bp | AGACAGCCCACGCGAAGTAGCCCAGCCCTAGGGCGGTaGTCAGTGAGGGCCAGAGTCTGGCTACACGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: RQPTRSSPALGR*SVRARVWLHGS Trigger: ACTTCCGTGTAGCCAGACTCTGGCCCTCACTGATCACCGCCCTAGGGCTGGGCTACTTCGCGTGGGCTGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100811.6 |
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